ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0142 check: MH A KOG0925 RNA processing and modification mRNA splicing factor ATP-dependent RNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0142 42284 44584 767
(767 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 1357 0.0
SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA ... 985 0.0
At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 846 0.0
At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 841 0.0
7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 841 0.0
Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 834 0.0
CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 813 0.0
Hs4826690 [A] KOG0922 DEAH-box RNA helicase 625 e-179
SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase 622 e-178
7303231 [A] KOG0922 DEAH-box RNA helicase 619 e-177
At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 615 e-176
At3g26560 [A] KOG0922 DEAH-box RNA helicase 610 e-174
CE01889 [A] KOG0922 DEAH-box RNA helicase 610 e-174
7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 599 e-171
At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 598 e-170
Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 588 e-167
Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 583 e-166
At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 582 e-166
YER013w [A] KOG0922 DEAH-box RNA helicase 580 e-165
CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 566 e-161
Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 561 e-159
CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 559 e-159
At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA hel... 550 e-156
Hs20544129 [A] KOG0922 DEAH-box RNA helicase 525 e-148
YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 514 e-145
SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase 499 e-141
YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 484 e-136
Hs20336302 [A] KOG0922 DEAH-box RNA helicase 482 e-135
CE27311 [A] KOG0922 DEAH-box RNA helicase 482 e-135
At1g26370 [A] KOG0922 DEAH-box RNA helicase 471 e-132
Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 467 e-131
At1g27900 [A] KOG0922 DEAH-box RNA helicase 454 e-127
7295673 [A] KOG0922 DEAH-box RNA helicase 434 e-121
YKL078w [A] KOG0922 DEAH-box RNA helicase 432 e-121
Hs21362038 [A] KOG0922 DEAH-box RNA helicase 422 e-118
SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA h... 414 e-115
SPAC145.03 [A] KOG0922 DEAH-box RNA helicase 407 e-113
ECU11g0860 [A] KOG0922 DEAH-box RNA helicase 393 e-109
7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 387 e-107
ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 385 e-106
7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 377 e-104
SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA h... 357 5e-98
At5g10370_1 [A] KOG0922 DEAH-box RNA helicase 337 4e-92
SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase 330 5e-90
At4g01020_1 [A] KOG0922 DEAH-box RNA helicase 326 7e-89
At2g35920 [A] KOG0920 ATP-dependent RNA helicase A 314 4e-85
At2g01130 [A] KOG0920 ATP-dependent RNA helicase A 304 4e-82
7298709 [A] KOG0920 ATP-dependent RNA helicase A 298 3e-80
Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 297 5e-80
CE27603 [A] KOG0922 DEAH-box RNA helicase 290 6e-78
At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 290 6e-78
Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A 288 2e-77
7293584_2 [A] KOG0922 DEAH-box RNA helicase 286 8e-77
Hs22066120 [A] KOG0922 DEAH-box RNA helicase 283 7e-76
SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A 273 6e-73
ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 272 2e-72
At1g58050 [A] KOG0920 ATP-dependent RNA helicase A 265 2e-70
YLR419w [A] KOG0920 ATP-dependent RNA helicase A 253 1e-66
SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A 249 1e-65
7293336 [A] KOG0920 ATP-dependent RNA helicase A 249 1e-65
Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A 231 3e-60
Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A 231 3e-60
Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A 231 3e-60
Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A 225 2e-58
Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE 215 2e-55
CE13245 [A] KOG0922 DEAH-box RNA helicase 211 4e-54
ECU04g0250 [A] KOG0922 DEAH-box RNA helicase 209 2e-53
At1g48650 [A] KOG0920 ATP-dependent RNA helicase A 202 1e-51
7300065 [A] KOG0920 ATP-dependent RNA helicase A 201 4e-51
7290296 [AJ] KOG0926 DEAH-box RNA helicase 185 3e-46
Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A 182 2e-45
At1g33390 [AJ] KOG0926 DEAH-box RNA helicase 181 5e-45
YMR128w [AJ] KOG0926 DEAH-box RNA helicase 177 5e-44
7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 175 2e-43
At4g18470_2 [A] KOG0922 DEAH-box RNA helicase 174 5e-43
CE18218 [K] KOG0921 Dosage compensation complex subunit MLE 173 8e-43
7292573 [A] KOG0920 ATP-dependent RNA helicase A 172 2e-42
CE29563 [AJ] KOG0926 DEAH-box RNA helicase 169 1e-41
At1g58060 [A] KOG0920 ATP-dependent RNA helicase A 166 1e-40
Hs7661934 [A] KOG0922 DEAH-box RNA helicase 164 5e-40
At2g47680 [A] KOG0920 ATP-dependent RNA helicase A 159 1e-38
Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A 155 2e-37
7302201 [K] KOG0921 Dosage compensation complex subunit MLE 153 8e-37
At2g30800 [A] KOG0920 ATP-dependent RNA helicase A 151 3e-36
At1g06670 [A] KOG0920 ATP-dependent RNA helicase A 150 5e-36
CE05718 [A] KOG0920 ATP-dependent RNA helicase A 145 2e-34
HsM13375825 [A] KOG0922 DEAH-box RNA helicase 99 2e-20
Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE 74 1e-12
Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE 67 1e-10
7291655_1 [A] KOG0920 ATP-dependent RNA helicase A 65 4e-10
Hs17433962 [A] KOG0920 ATP-dependent RNA helicase A 56 2e-07
CE27331 [O] KOG0731 AAA+-type ATPase containing the peptidase M4... 52 3e-06
>YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 767
Score = 1357 bits (3511), Expect = 0.0
Identities = 663/752 (88%), Positives = 715/752 (94%)
Query: 3 KRRFSNEHVSAVETSIPEHAAEIAEKLTKDHPPPAAEPLIHHDSGEFSGMQRHHTTAADA 62
KRRFS+EH VETSIPE AAEIAE+L+K HP P+ EPL+HHD+GEF G+QRHHT+A +A
Sbjct: 4 KRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEA 63
Query: 63 ERLENGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKT 122
++LE+G +NPFTG + KY ILK+RR+LPVHAQRDEFLK+YQ NQIMVFVGETGSGKT
Sbjct: 64 QKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKT 123
Query: 123 TQIPQFVLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS 182
TQIPQFVLFDEMPHL+NTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS
Sbjct: 124 TQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS 183
Query: 183 NKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKI 242
NKTILKYMTDGMLLREAMEDHDL RYSCIILDEAHERTLATDILMGLLKQV+ RRPDLKI
Sbjct: 184 NKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKI 243
Query: 243 IIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEK 302
IIMSATLDAEKFQRYFN APLLAVPGRT+PVE+YYTPEFQRDYLDSAIRTVLQIHATEE
Sbjct: 244 IIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA 303
Query: 303 GDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
GDILLFLTGEDEIEDAVRKISLEGDQL+RE+GCGP+SVYPLYGSLPPHQQQRIFEPAPES
Sbjct: 304 GDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPES 363
Query: 363 HNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
HNGRPGRKV++STNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS
Sbjct: 364 HNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQ 423
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 482
TRPGKCFRLYTEEAF+KELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM
Sbjct: 424 RAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 483
Query: 483 DPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEML 542
DPPAPETMMRALEELN+LACLDD+GNLTPLGRLASQFPLDPMLAVMLIGS EF CS+E+L
Sbjct: 484 DPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEIL 543
Query: 543 TIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWC 602
TIVAMLSVP+VFIRP+KDKKR+DDAKNIFAHPDGDH+TLLNVYHAFKSDEAYEYGI+KWC
Sbjct: 544 TIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWC 603
Query: 603 RDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKK 662
RD++LNYRSLSAADNIR+QLERLM RYNLELNTTDY+SP+YFDNIRKALA+GFFMQVAKK
Sbjct: 604 RDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKK 663
Query: 663 RSGGKGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAP 722
RSG KGYITVKDNQDVLIHPSTVLGHDAEWV+YNEFVLTSKNYIRTVTSVRPEWLIE+AP
Sbjct: 664 RSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAP 723
Query: 723 AYYDLDHFQKGDIKLSLERVKQKLDKMVELQQ 754
AYYDL +FQKGD+KLSLER+K+K+D++ EL+Q
Sbjct: 724 AYYDLSNFQKGDVKLSLERIKEKVDRLNELKQ 755
>SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 735
Score = 985 bits (2546), Expect = 0.0
Identities = 497/723 (68%), Positives = 584/723 (80%), Gaps = 9/723 (1%)
Query: 27 EKLTKDHPPPAAEPLIHHDSGE----FSGMQRHHTTAADAERLENGSVNPFTGGSLSEKY 82
+KL ++ P L + D E G+ R TT A A + E G N F S+ Y
Sbjct: 6 KKLRQESKNPYLAHLNNGDDSEEVVSSKGLTRRATTVAQAAKAEEGPNNFFNDKPFSQNY 65
Query: 83 FGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQV 142
F IL+ RR+LPV+ QR+EFLKIY ENQI+VFVGETGSGKTTQIPQFVL+DE+PHL NTQ+
Sbjct: 66 FKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQI 125
Query: 143 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 202
ACTQPRRVAAMSVA+RVA+EMDV LGEEVGY+IRFE+ + T+LKYMTDGMLLREAM D
Sbjct: 126 ACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTD 185
Query: 203 HDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAP 262
H L RYSCIILDEAHERTLATDILMGL+K++ RRPDLKII+MSATLDA+KFQ+YF AP
Sbjct: 186 HMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAP 245
Query: 263 LLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKI 322
LLAVPGRT+PVEIYYT E +RDYL++A+RTVLQIH E GDIL+FLTGE+EIEDA RKI
Sbjct: 246 LLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKI 305
Query: 323 SLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSL 382
+LE D L+RE GP+ VYPLYGSLPP+QQQRIFEP PE GRKV++STNIAETSL
Sbjct: 306 TLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSL 365
Query: 383 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEE 442
TIDGIVYVVDPGFSKQK+YNPRIRVESLLVSPISKAS TRPGKCFRLYTEE
Sbjct: 366 TIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 425
Query: 443 AFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLAC 502
AF+KELIEQ+YPEILRSNLSSTVLELKKLGIDDLVHFD+MDPPAPETMMRALEELN+L C
Sbjct: 426 AFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNC 485
Query: 503 LDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKK 562
LDD+G+LTPLGR AS+FPLDP LAVMLI SPEF CS E+L++ A+LSVP+VF+RP+ +K
Sbjct: 486 LDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARK 545
Query: 563 RSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQL 622
+D+ + F HPDGDHLTLLNVYHA+KS E G WC ++FL++R+L +ADN+R QL
Sbjct: 546 LADEMRQQFTHPDGDHLTLLNVYHAYKSGE----GTADWCWNHFLSHRALISADNVRKQL 601
Query: 623 ERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHP 682
R M R +EL +T +D Y+ NIR+AL +GFFMQVAKK + GK Y+T+KDNQ V +HP
Sbjct: 602 RRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHP 661
Query: 683 STVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKG-DIKLSLER 741
S L EWVVYNEFVLT+K++IR VT++RPEWLIELAP YYDLD F ++K +L++
Sbjct: 662 SCGLSVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVKSALQK 721
Query: 742 VKQ 744
V Q
Sbjct: 722 VYQ 724
>At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 726
Score = 846 bits (2185), Expect = 0.0
Identities = 431/695 (62%), Positives = 535/695 (76%), Gaps = 21/695 (3%)
Query: 67 NGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIP 126
N +N + G S++Y+ IL+ RR LPV Q++EFLK NQ ++ VGETGSGKTTQIP
Sbjct: 36 NSLINKWNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIP 95
Query: 127 QFVL----FDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS 182
QFV+ + + V CTQPRRVAAMSV++RVAEEMDV +GEEVGYSIRFE+ +S
Sbjct: 96 QFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS 155
Query: 183 NKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKI 242
+T+LKY+TDGMLLREAM D L+RY IILDEAHERTLATD+L GLLK+V+ RPDLK+
Sbjct: 156 PRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKL 215
Query: 243 IIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEK 302
++MSATL+AEKFQ YF+ APL+ VPGR HPVEI+YT E +RDYL++AIRTV+QIH E
Sbjct: 216 VVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPP 275
Query: 303 GDILLFLTGEDEIEDAVRKISLE----GDQLIREQGCGPISVYPLYGSLPPHQQQRIFEP 358
GDIL+FLTGE+EIEDA RKI+ E GDQ+ GPI V PLY +LPP QQ+IF+P
Sbjct: 276 GDILVFLTGEEEIEDACRKINKEVGNLGDQV------GPIKVVPLYSTLPPAMQQKIFDP 329
Query: 359 APE--SHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPIS 416
APE + G PGRK++VSTNIAETSLTIDGIVYV+DPGF+KQKVYNPRIRVESLLVSPIS
Sbjct: 330 APEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPIS 389
Query: 417 KASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDL 476
KAS TRPGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDL
Sbjct: 390 KASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL 449
Query: 477 VHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFS 536
VHFDFMDPPAPET+MRALE LN+L LDDDGNLT G + S+FPLDP +A MLI SPEF+
Sbjct: 450 VHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFN 509
Query: 537 CSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEY 596
CS E+L++ AMLSVP+ FIRP + +K +D+AK F H +GDHLTLLNVYHAFK +
Sbjct: 510 CSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDP- 568
Query: 597 GINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFF 656
WC +NF+N R++ +ADN+R QL R+M R+NL++ +TD++S Y+ NIRKA+ AG+F
Sbjct: 569 ---NWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYF 625
Query: 657 MQVAKKRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEW 716
MQVA G Y+TVKDNQ V +HPS L H EWV+YNE+VLTS+N+IRTVT +R EW
Sbjct: 626 MQVAHLERTGH-YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEW 684
Query: 717 LIELAPAYYDLDHFQKGDIKLSLERVKQKLDKMVE 751
L+++A YYDL +F + K +E++ +K ++ E
Sbjct: 685 LVDVASHYYDLSNFPNCEAKRVIEKLYKKREREKE 719
>At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 841 bits (2173), Expect = 0.0
Identities = 426/689 (61%), Positives = 534/689 (76%), Gaps = 21/689 (3%)
Query: 70 VNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFV 129
+N + G + S++YF IL+ RRDLPV Q+D+FL NQ ++ VGETGSGKTTQIPQFV
Sbjct: 43 INKWNGKAYSQRYFEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFV 102
Query: 130 L----FDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT 185
L D + V CTQPRRVAAMSV++RVA+EMDV +GEEVGYSIRFE+ TS++T
Sbjct: 103 LDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRT 162
Query: 186 ILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIM 245
+LKY+TDGMLLREAM D L+RY IILDEAHERTLATD+L GLLK+V+ RPDLK+++M
Sbjct: 163 MLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVM 222
Query: 246 SATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDI 305
SATL+AEKFQ YF+ APL+ VPGR HPVEI+YT E +RDYL++AIRTV+QIH E GDI
Sbjct: 223 SATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDI 282
Query: 306 LLFLTGEDEIEDAVRKISLE----GDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPE 361
L+FLTGE+EIEDA RKI+ E GDQ+ GP+ V PLY +LPP QQ+IF+PAP
Sbjct: 283 LVFLTGEEEIEDACRKINKEVSNLGDQV------GPVKVVPLYSTLPPAMQQKIFDPAPV 336
Query: 362 --SHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 419
+ G GRK++VSTNIAETSLTIDGIVYV+DPGF+KQKVYNPRIRVESLLVSPISKAS
Sbjct: 337 PLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 396
Query: 420 XXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 479
TRPGKCFRLYTE++F +L Q+YPEILRSNL++TVL LKKLGIDDLVHF
Sbjct: 397 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 456
Query: 480 DFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSE 539
DFMDPPAPET+MRALE LN+L LDD+GNLT G + S+FPLDP ++ MLI SPEF+CS
Sbjct: 457 DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSN 516
Query: 540 EMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGIN 599
E+L++ AMLSVP+ F+RP + +K +D+AK F H DGDHLTLLNVYHA+K +
Sbjct: 517 EILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDP---- 572
Query: 600 KWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQV 659
WC +NF+N R++ +ADN+R QL R+M R+NL++ +TD++S Y+ NIRKA+ AG+FMQV
Sbjct: 573 NWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQV 632
Query: 660 AKKRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIE 719
A G Y+TVKDNQ V +HPS L H EWV+YNE+VLT++N+IRTVT +R EWL++
Sbjct: 633 AHLERTGH-YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVD 691
Query: 720 LAPAYYDLDHFQKGDIKLSLERVKQKLDK 748
+A YYDL +F + K +LE++ +K ++
Sbjct: 692 VAQHYYDLSNFPNCEAKRALEKLYKKRER 720
>7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 841 bits (2173), Expect = 0.0
Identities = 433/681 (63%), Positives = 531/681 (77%), Gaps = 10/681 (1%)
Query: 69 SVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQF 128
++NP T S++Y + K R LPV + +F+++ +Q +V VGETGSGKTTQIPQ+
Sbjct: 49 TMNPLTNTPYSQRYQNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQW 108
Query: 129 VLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILK 188
+ D V+CTQPRRVAAMSVAQRV+EEMDVKLGEEVGYSIRFE+ ++ KT+LK
Sbjct: 109 CV-DFAVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLK 167
Query: 189 YMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSAT 248
YMTDGMLLREAM D L +Y I+LDEAHERTLATDILMG+LK+VI +R DLK+++MSAT
Sbjct: 168 YMTDGMLLREAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSAT 227
Query: 249 LDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEE-KGDILL 307
LDA KFQ+YF+ APL+ VPGRTHPVEI+YTPE +RDYL++AIRTV+QIH EE +GDIL+
Sbjct: 228 LDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILM 287
Query: 308 FLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESH-NGR 366
FLTG++EIE+A ++I E D L E G + PLY +LPP+ QQRIFEPAP + NG
Sbjct: 288 FLTGQEEIEEACKRIKREIDNLGSE--IGELKCIPLYSTLPPNLQQRIFEPAPPPNANGA 345
Query: 367 PGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXX 426
GRKV+VSTNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLVSPISKAS
Sbjct: 346 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGR 405
Query: 427 XXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPA 486
TRPGKCFRLYTE+AFK E+ + +YPEILRSNL + VL+LKKLGIDDLVHFDFMDPPA
Sbjct: 406 AGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 465
Query: 487 PETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVA 546
PET+MRALE LN+LA LDDDGNLT LG + S+FPLDP LA MLI S + +CS E+L+I A
Sbjct: 466 PETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITA 525
Query: 547 MLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNF 606
MLSVP F+RP++ KK +D+AK FAH DGDHLTLLNVYHAFK WC +NF
Sbjct: 526 MLSVPQCFVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDP----NWCYENF 581
Query: 607 LNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGG 666
+N+RSL +ADN+R QL R+M R+NL +T++ S Y+ NIRKAL GFFMQVA G
Sbjct: 582 INFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTG 641
Query: 667 KGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYD 726
Y+T+KDNQ+V +HPST L H +WV+YNEFVLT+KNYIRTVT V+PEWL LAP YYD
Sbjct: 642 Y-YLTIKDNQNVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYD 700
Query: 727 LDHFQKGDIKLSLERVKQKLD 747
L++F + + K LE ++Q+L+
Sbjct: 701 LNNFPQCEAKRQLELLQQRLE 721
>Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 813
Score = 834 bits (2155), Expect = 0.0
Identities = 437/717 (60%), Positives = 534/717 (73%), Gaps = 16/717 (2%)
Query: 34 PPPAAEPLIHHDSGEFSGMQRHHTTAADAERLENGS----VNPFTGGSLSEKYFGILKVR 89
PP A H S H + A + S +NPFT + +Y+ ILK R
Sbjct: 75 PPLKASHSAHSTHSAHSTHSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYDILKKR 134
Query: 90 RDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ--VACTQP 147
LPV +D F I +Q V VGETGSGKTTQIP + + M L + VACTQP
Sbjct: 135 LQLPVWEYKDRFTDILGRHQSFVLVGETGSGKTTQIPHRCV-EYMRSLPGPKRGVACTQP 193
Query: 148 RRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKR 207
RRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KT YMTDGMLLREAM D L+R
Sbjct: 194 RRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTFFMYMTDGMLLREAMNDPLLER 253
Query: 208 YSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVP 267
Y IILDEAHERTLATDILMG+LK+V+ +R DLK+I+MSATLDA KFQ YF+ PLL +P
Sbjct: 254 YGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIP 313
Query: 268 GRTHPVEIYYTPEFQRDYLDSAIRTVLQIH-ATEEKGDILLFLTGEDEIEDAVRKISLEG 326
GRTHPVEI+YTPE +RDYL++AIRTV+QIH EE+GD+LLFLTG++EI++A ++I E
Sbjct: 314 GRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREV 373
Query: 327 DQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAP-ESHNGRPGRKVIVSTNIAETSLTID 385
D L E G I + PLY +LPP QQQRIFEP P + NG GRKV+VSTNIAETSLTID
Sbjct: 374 DDLGPE--VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTID 431
Query: 386 GIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFK 445
G+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKAS TRPGKCFRLYTE+A+K
Sbjct: 432 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 491
Query: 446 KELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDD 505
E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPPAPET+MRALE LN+LA L+D
Sbjct: 492 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 506 DGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSD 565
DG+LT LG + ++FPLDP LA M+I S +++CS E+L+I AMLSVP F+RP++ KK +D
Sbjct: 552 DGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAAD 611
Query: 566 DAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERL 625
+AK FAH DGDHLTLLNVYHAFK + + +WC DNF+NYRSL +ADN+R QL R+
Sbjct: 612 EAKMRFAHIDGDHLTLLNVYHAFKQN----HESVQWCYDNFINYRSLMSADNVRQQLSRI 667
Query: 626 MVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTV 685
M R+NL +TD+ S Y+ NIRKAL G+FMQVA G Y+TVKDNQ V +HPSTV
Sbjct: 668 MDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH-YLTVKDNQVVQLHPSTV 726
Query: 686 LGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLERV 742
L H EWV+YNEFVLT+KNYIRT T ++PEWL+++AP YYD+ +F + + K L+R+
Sbjct: 727 LDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 813 bits (2100), Expect = 0.0
Identities = 417/687 (60%), Positives = 514/687 (74%), Gaps = 15/687 (2%)
Query: 70 VNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFV 129
+NP+ S +Y+ I + R LPV +++F+++ + NQ + VGETGSGKTTQIPQ+
Sbjct: 54 INPYNNQPFSNRYWAIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWA 113
Query: 130 LF------DEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSN 183
+ P Q VACTQPRRVAAMSVA RVAEEMDV LG+EVGYSIRFE+ S
Sbjct: 114 VEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISE 173
Query: 184 KTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKII 243
+T+LKY TDGMLLREAM L +Y +ILDEAHERTLATDILMGL+K+++ R D+K++
Sbjct: 174 RTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVV 233
Query: 244 IMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEE-K 302
IMSATLDA KFQRYF PLL+VPGRT PVEI++TP ++DYL++AIRTV+QIH EE +
Sbjct: 234 IMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVE 293
Query: 303 GDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
GDILLFLTG++EIE+A ++I E L + G +S PLY +LPP QQRIFEPAP +
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGA--LSCIPLYSTLPPAAQQRIFEPAPPN 351
Query: 363 H-NGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXX 421
NG RK ++STNIAETSLTIDG+V+V+DPGFSKQKVYNPRIRVESLLV PISKAS
Sbjct: 352 RPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAM 411
Query: 422 XXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDF 481
T+PGKCFRLYTE A+ E+ +Q+YPEILRSNL S VL+LKKLG +DLVHFDF
Sbjct: 412 QRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDF 471
Query: 482 MDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEM 541
MDPPAPET+MRALE LN+L ++DDG LT LG L ++FPLDP LA MLI S E +CS E+
Sbjct: 472 MDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEI 531
Query: 542 LTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKW 601
L+I AMLSVP ++RP++ + +D+AK FAH DGDHLTLLNVYH+FK ++ +W
Sbjct: 532 LSITAMLSVPQCWVRPNEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDP----QW 587
Query: 602 CRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAK 661
C DNF+NYR++ AD +R QL R+M +YNL +TD+ S Y+ NIRKAL AGFFMQVA
Sbjct: 588 CYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAH 647
Query: 662 KRSGGKGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELA 721
G Y+TVKDNQ V +HPSTVL H EW +YNEFVLT+KN+IRTVT VRPEWL+++A
Sbjct: 648 LERSGH-YVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIA 706
Query: 722 PAYYDLDHFQKGDIKLSLERVKQKLDK 748
P YYDLD+F GD K L V Q L +
Sbjct: 707 PQYYDLDNFPDGDTKRKLTTVMQTLQR 733
>Hs4826690 [A] KOG0922 DEAH-box RNA helicase
Length = 1220
Score = 625 bits (1613), Expect = e-179
Identities = 335/677 (49%), Positives = 465/677 (68%), Gaps = 33/677 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
IL+ R LP++ +++ ++ +NQI++ +GETGSGKTTQI Q++ E + ++ C
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLA--EAGYTSRGKIGC 615
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RV+EE LG+EVGY+IRFE+ TS +T++KYMTDGMLLRE + D D
Sbjct: 616 TQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD 675
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L +Y+ I+LDEAHERT+ TD+L GLLK+ + +R D+K+I+ SATLDA KF +YF +AP+
Sbjct: 676 LTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIF 735
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGRT+PVEI YT E + DYLD+++ TV+QIH TE GDIL+FLTG++EI+ A +I
Sbjct: 736 TIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTAC-EILY 794
Query: 325 EGDQLIREQGCGP----ISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAE 379
E R + GP + + P+Y +LP Q RIF+PAP PG RKV+++TNIAE
Sbjct: 795 E-----RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP------PGSRKVVIATNIAE 843
Query: 380 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLY 439
TSLTIDGI YVVDPGF KQKVYN + ++ L+V+PIS+A T PGKC+RLY
Sbjct: 844 TSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLY 903
Query: 440 TEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNF 499
TE A++ E++ + PEI R+NL+STVL LK +GI+DL+ FDFMD P ET++ A+E+L
Sbjct: 904 TERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYT 963
Query: 500 LACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSK 559
L LDD+G LT LGR ++FPL+PML MLI S CSEEMLTIV+MLSV +VF RP
Sbjct: 964 LGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD 1023
Query: 560 DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIR 619
+ +D K F +GDHLTLL VY+++K+++ N WC +NF+ RSL A +IR
Sbjct: 1024 KQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKF----SNPWCYENFIQARSLRRAQDIR 1079
Query: 620 NQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVL 679
Q+ +M R+ L++ + + R ++KA+ +GFF AKK +GY T+ D Q V
Sbjct: 1080 KQMLGIMDRHKLDVVSCGKSTVR----VQKAICSGFFRNAAKK-DPQEGYRTLIDQQVVY 1134
Query: 680 IHPSTVL-GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLS 738
IHPS+ L EWVVY+E VLT+K Y+R VT++ P WL+E APA++ + KLS
Sbjct: 1135 IHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKV----SDPTKLS 1190
Query: 739 LERVKQKLDKMVELQQE 755
++ +Q+L+ + +E
Sbjct: 1191 KQKKQQRLEPLYNRYEE 1207
>SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 622 bits (1604), Expect = e-178
Identities = 323/638 (50%), Positives = 447/638 (69%), Gaps = 17/638 (2%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R LPV R +FL+ +NQI+V +GETGSGKTTQI Q+ L +E + + CTQPR
Sbjct: 507 REGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQY-LAEEGYTSDSKMIGCTQPR 565
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAAMSVA+RVAEE+ ++GEEVGY+IRFE+KTS T +KYMTDGML RE + D L +Y
Sbjct: 566 RVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKY 625
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S IILDEAHERT+ATD+L GLLK + +RPDLK+I+ SATLDAE+F YF K P+ +PG
Sbjct: 626 SVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPG 685
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQ 328
R++PVEI YT + + DYLD+A+ TV+QIH +E GDIL+FLTG++EI+ + +I E +
Sbjct: 686 RSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSC-EILYERSK 744
Query: 329 LIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIV 388
++ + + + P+Y +LP Q RIFEPAP GRKV+++TNIAETSLTIDGI
Sbjct: 745 MLGDS-IPELVILPVYSALPSEIQSRIFEPAPPG-----GRKVVIATNIAETSLTIDGIY 798
Query: 389 YVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKEL 448
YVVDPGF KQ ++P++ ++SL+V+PIS+A T PGKC+RLYTE A++ E+
Sbjct: 799 YVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEM 858
Query: 449 IEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGN 508
+ PEI R NLS T+L LK +GI+DL++FDFMDPP +TM+ AL+ L L+ LDD+G
Sbjct: 859 LPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGL 918
Query: 509 LTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAK 568
LTPLGR + FP++P L+ +LI S E CSEEML+I+AMLSVP+++ RP + ++ +D +
Sbjct: 919 LTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQR 978
Query: 569 NIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVR 628
FA+P+ DHLTLLNVY +K + + WC ++++ R + A+++R QL RLM R
Sbjct: 979 AQFANPESDHLTLLNVYTTWKMNRCSD----NWCYEHYIQARGMRRAEDVRKQLIRLMDR 1034
Query: 629 YNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTVL-G 687
Y + R + I +AL +G+F VAK+ S Y T+ +N V +HPS VL G
Sbjct: 1035 YRHPV----VSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFG 1090
Query: 688 HDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
AEWV+Y+E + TSK Y+ TV++V P+WL+E+AP ++
Sbjct: 1091 KAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFF 1128
>7303231 [A] KOG0922 DEAH-box RNA helicase
Length = 1242
Score = 619 bits (1597), Expect = e-177
Identities = 331/676 (48%), Positives = 465/676 (67%), Gaps = 31/676 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
+++ R+ LP++ RD+ +K +NQI++ +GETGSGKTTQI Q++ E ++ C
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYL--GECGFTARGKIGC 636
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RVAEE +LG+EVGY+IRFE+ TS +TI+KYMTDGMLLRE + + +
Sbjct: 637 TQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAE 696
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
LK YS I+LDEAHERT+ TD+L GLLK + +RP+LK+I+ SATLDA KF +YF KAP+
Sbjct: 697 LKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIF 756
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGRT PVE+ YT E + DYLD+++ TV+QIH E GDILLFLTG++EI+ A +I
Sbjct: 757 TIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTAC-EILY 815
Query: 325 EGDQLIREQGCGP----ISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAET 380
E R + GP + + P+Y +LP Q RIF+PAP RKV+++TNIAET
Sbjct: 816 E-----RMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAG-----SRKVVIATNIAET 865
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
SLTIDGI YVVDPGF KQKVYN + ++SL+V+PIS+A+ T PGK +RLYT
Sbjct: 866 SLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYT 925
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
E A++ E++ PEI R+NL++TVL+LK +GI+DL+HFDFMD P E+++ ALE+L+ L
Sbjct: 926 ERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSL 985
Query: 501 ACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKD 560
+ LDD+G LT LGR ++FPL+P L+ MLI S CS+E+LTIV+MLSV +VF RP
Sbjct: 986 SALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDK 1045
Query: 561 KKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRN 620
+ +D K F +GDHLTLL VY+++K+++ N WC +NF+ R+L + ++R
Sbjct: 1046 QALADQKKAKFNQAEGDHLTLLAVYNSWKNNKF----SNAWCYENFVQIRTLKRSQDVRK 1101
Query: 621 QLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLI 680
QL +M R+ L++ + +S R I+KA+ +GFF AKK +GY T+ D+Q V I
Sbjct: 1102 QLLGIMDRHKLDVVSAGKNSVR----IQKAICSGFFRNAAKK-DPQEGYRTLVDSQVVYI 1156
Query: 681 HPSTVL-GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSL 739
HPS+ L EWV+Y+E V T+K Y+R VT++ P+WL+E AP+++ KLS
Sbjct: 1157 HPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRF----SDPTKLSK 1212
Query: 740 ERVKQKLDKMVELQQE 755
+ Q+L+ + +E
Sbjct: 1213 FKKNQRLEPLYNKYEE 1228
>At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1038
Score = 615 bits (1587), Expect = e-176
Identities = 333/647 (51%), Positives = 444/647 (68%), Gaps = 27/647 (4%)
Query: 87 KVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQ 146
+VRR LP++ RD+ LK +E+Q++V VG+TGSGKTTQIPQ++ E + + +V CTQ
Sbjct: 393 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYL--HEAGYTKRGKVGCTQ 450
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLK 206
PRRVAAMSVA RVA+EM VKLG EVGYSIRFE+ TS+KT+LKYMTDGMLLRE + + DL
Sbjct: 451 PRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLA 510
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAV 266
YS +I+DEAHERTL+TDIL GL+K + RPDLK++I SAT+DAEKF YF+ AP+ +
Sbjct: 511 SYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSF 570
Query: 267 PGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDA--VRKISL 324
PGR +PVEI YT + DY+D+AI T+L IH E GDIL+F TG++EIE A + K +
Sbjct: 571 PGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRI 630
Query: 325 EG-DQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLT 383
G IRE + + P+Y +LP Q +IFEP PE RKV+++TNIAETSLT
Sbjct: 631 RGLGTKIRE-----LIICPIYANLPSELQAKIFEPTPEG-----ARKVVLATNIAETSLT 680
Query: 384 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEA 443
IDGI YVVDPGFSK K YNPR +ESLL++PISKAS T PGKC+RLYT
Sbjct: 681 IDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFN 740
Query: 444 FKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACL 503
+ +L E + PE+ R+NL+S VL LK LGI DL++FDFMDPP E ++++LE L L L
Sbjct: 741 YNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGAL 800
Query: 504 DDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSV-PSVFIRPSKDKK 562
+ G LT GR ++FPLDPML+ M++ S ++ CS+E+++I AMLS+ S+F RP +
Sbjct: 801 NKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQV 860
Query: 563 RSDDAK-NIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQ 621
+D+A+ N GDH+ LL VY ++K +WC +N++ RS+ A +IR+Q
Sbjct: 861 HADNARMNFHTGNVGDHIALLKVYSSWKETNF----STQWCYENYIQVRSMKRARDIRDQ 916
Query: 622 LERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIH 681
LE L+ R +++++ + D++RK++ AGFF AK + G Y TVK Q V IH
Sbjct: 917 LEGLLERVEIDISS----NLNELDSVRKSIVAGFFPHTAKLQKNG-SYRTVKHPQTVHIH 971
Query: 682 PSTVLGHD-AEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDL 727
P++ L WVVY+E VLTSK Y+R VT ++PEWLIELAP YY L
Sbjct: 972 PNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQL 1018
>At3g26560 [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 610 bits (1574), Expect = e-174
Identities = 321/673 (47%), Positives = 452/673 (66%), Gaps = 29/673 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I + R LP++ + E ++ +NQ++V +GETGSGKTTQ+ Q++ E + ++ C
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA--EAGYTTKGKIGC 565
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RVAEE +LGEEVGY+IRFE+ T T++KYMTDGMLLRE + D +
Sbjct: 566 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 625
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L +YS I+LDEAHERT+ TD+L GLLK+++ RR DL++I+ SATLDAEKF YF +
Sbjct: 626 LSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIF 685
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGRT PVEI YT + + DYLD+A+ TVLQIH TE +GDIL+FLTG++EI+ A + +
Sbjct: 686 TIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSL-- 743
Query: 325 EGDQLIREQGCGP----ISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAE 379
R +G G + + P+Y +LP Q RIF+P P PG RKV+V+TNIAE
Sbjct: 744 ----YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPP------PGKRKVVVATNIAE 793
Query: 380 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLY 439
SLTIDGI YVVDPGF+KQ VYNP+ +ESL+++PIS+AS T PGKC+RLY
Sbjct: 794 ASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLY 853
Query: 440 TEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNF 499
TE A++ E+ S PEI R NL T L +K +GI+DL+ FDFMDPP P+ ++ A+E+L
Sbjct: 854 TESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYS 913
Query: 500 LACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSK 559
L LD++G LT LGR ++FPL+P L+ ML+ S + CS+E+LT++AM+ ++F RP +
Sbjct: 914 LGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPRE 973
Query: 560 DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIR 619
+ ++D + F P+GDHLTLL VY A+K+ WC +NF+ RSL A ++R
Sbjct: 974 KQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNF----SGPWCFENFIQSRSLRRAQDVR 1029
Query: 620 NQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVL 679
QL +M +Y L++ T + + F IRKA+ AGFF A+K +GY T+ +NQ V
Sbjct: 1030 KQLLSIMDKYKLDVVT----AGKNFTKIRKAITAGFFFHGARK-DPQEGYRTLVENQPVY 1084
Query: 680 IHPSTVL-GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLS 738
IHPS+ L +WV+Y++ V+T+K Y+R VT + P+WL+ELAP ++ + K +
Sbjct: 1085 IHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKR 1144
Query: 739 LERVKQKLDKMVE 751
ER++ D+ E
Sbjct: 1145 QERIEPLYDRYHE 1157
>CE01889 [A] KOG0922 DEAH-box RNA helicase
Length = 1200
Score = 610 bits (1573), Expect = e-174
Identities = 330/673 (49%), Positives = 456/673 (67%), Gaps = 33/673 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
+++ R LP+ A + ++ +NQI+V VGETGSGKTTQ+ Q+ + E + ++ C
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAI--EAGLGRRGKIGC 590
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RVAEE KLG +VGY+IRFE+ TS TI+KYMTDGMLLRE + D D
Sbjct: 591 TQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPD 650
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L YS I+LDEAHERT+ TD+L GLLK +RP+LK+II SATLD+ KF YF +AP+
Sbjct: 651 LSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIF 710
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGRT PVEI YT E + DYL++A TV+QIH TE GD+L+FLTG++EI+ + +
Sbjct: 711 TIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVL-- 768
Query: 325 EGDQLIREQGCGP----ISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAET 380
R + GP + + P+YG+LP Q RIF+PAP RKV+++TNIAET
Sbjct: 769 ----YERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK-----RKVVIATNIAET 819
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
SLTIDGI YVVDPGF KQK+YNP+ ++SL+V+PIS+A+ T PGKC+RLYT
Sbjct: 820 SLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYT 879
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
E AF+ E++ PEI R+NL+ST+L+LK +GI++L+ FDFMD P ++M+ AL L+ L
Sbjct: 880 ERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTL 939
Query: 501 ACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKD 560
+ LD DG LT LGR ++FPL+P L+ +LI S + CSEE+LTIVAML+V ++F RP +
Sbjct: 940 SALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEK 999
Query: 561 KKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRN 620
+ +D K F P+GDHLTLL VY+++K+ + WC +NF+ RS+ A +IR
Sbjct: 1000 QDHADQKKAKFHQPEGDHLTLLAVYNSWKN----HHFSQPWCFENFIQVRSMKRAQDIRK 1055
Query: 621 QLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLI 680
QL +M R+ L + + D R ++KA+ +GFF A KR +GY T+ D Q+V I
Sbjct: 1056 QLLGIMDRHKLLMVSCGRDVSR----VQKAICSGFFRNAA-KRDPQEGYRTLTDGQNVYI 1110
Query: 681 HPSTV-LGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGD-IKLS 738
HPS+ EWVVY+E V+T+K Y+R VT++ P+WL+E AP++ F+ GD KLS
Sbjct: 1111 HPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSF-----FKIGDSTKLS 1165
Query: 739 LERVKQKLDKMVE 751
+ QK+D + +
Sbjct: 1166 TFKRNQKIDPLFD 1178
>7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 894
Score = 599 bits (1544), Expect = e-171
Identities = 322/648 (49%), Positives = 434/648 (66%), Gaps = 33/648 (5%)
Query: 87 KVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQ 146
+ RR LPV+ +++ + +E+Q+++ GETGSGKTTQ+PQ+++ + CTQ
Sbjct: 247 ETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTK-DKKMIGCTQ 305
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLK 206
PRRVAAMSVA RVAEEM VKLG EVGYSIRFE+ TS++TILKYMTDG L RE + + DL
Sbjct: 306 PRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLA 365
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAV 266
YS +I+DEAHERTL TDIL GL+K + RP+LK++I SATLDAEKF +F+ AP+ +
Sbjct: 366 SYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRI 425
Query: 267 PGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIE-------DAV 319
PGR +PV+I+YT + DY+D+ +VLQIHAT+ GDIL+FLTG+DEIE D V
Sbjct: 426 PGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRV 485
Query: 320 RKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAE 379
+++ + +LI V P+Y +LP Q +IFEP P + RKVI++TNIAE
Sbjct: 486 KRLGSKIRELI---------VIPVYANLPSDMQAKIFEPTPPN-----ARKVILATNIAE 531
Query: 380 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLY 439
TSLTID I+YV+DPGF+KQ +N R +ESL+V PISKAS T PGKCFRLY
Sbjct: 532 TSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLY 591
Query: 440 TEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNF 499
T A+K EL + + PEI R NL + VL LK LGI+DL+HFDF+DPP ET++ ALE+L
Sbjct: 592 TAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYA 651
Query: 500 LACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPS-VFIRPS 558
L L+ G LT LGR ++FP+DPM+ ML+ S ++ CSEEM+TI AMLSV S +F RP
Sbjct: 652 LGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPK 711
Query: 559 KDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNI 618
+D A+ F H GDHL+LL VY+ + + +WC +NF+ YRS+ A ++
Sbjct: 712 DKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDY----STQWCYENFIQYRSMKRARDV 767
Query: 619 RNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDV 678
R QL LM R +++ + ++ N+RKA AG+F VA+ GG Y T+K NQ V
Sbjct: 768 REQLVGLMQRVEIDMVSCLPETV----NVRKAATAGYFYHVARLSKGGH-YKTIKHNQTV 822
Query: 679 LIHPSTVLGHD-AEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
+IHP++ L + WV+Y+E V TSK Y+R V + +WL+E+AP YY
Sbjct: 823 MIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYY 870
>At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1087
Score = 598 bits (1542), Expect = e-170
Identities = 323/646 (50%), Positives = 439/646 (67%), Gaps = 29/646 (4%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R+ LP++ RD+ L +++Q+++ VGETGSGKTTQIPQ++ E + + +V CTQPR
Sbjct: 444 RKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYL--HEAGYTKLGKVGCTQPR 501
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAAMSVA RVA+EM KLG EVGYSIRFE+ TS KTILKYMTDGMLLRE + + DL Y
Sbjct: 502 RVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSY 561
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S II+DEAHERTL TDIL GL+K + RPDLK++I SAT+DAEKF +F++AP+ PG
Sbjct: 562 SVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPG 621
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQ 328
R +PV+I +T + DY+D+AI TVL IH E GD+L+FL G++EIE ++E +
Sbjct: 622 RRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIE------AVEENL 675
Query: 329 LIREQGCG----PISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTI 384
+ +G G + + P+Y +LP Q +IFEP PE RKV+++TNIAETSLTI
Sbjct: 676 KHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEG-----ARKVVLATNIAETSLTI 730
Query: 385 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAF 444
DGI YVVDPGFSK K YNPR +ESLLV+PISKAS T PGKC+RLYT +
Sbjct: 731 DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 790
Query: 445 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLD 504
+L + + PEI R+NL+S VL LK LGI +L++FDFMDPP E ++++LE L L L+
Sbjct: 791 YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 850
Query: 505 DDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSV-PSVFIRPSKDKKR 563
G LT GR ++FPLDPML+ M++ S ++ CS+E+++I AMLS+ PS+F RP +
Sbjct: 851 QLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVH 910
Query: 564 SDDA-KNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQL 622
+D+A KN GDH+ L +Y+++K +WC +N++ RS+ A +IR+QL
Sbjct: 911 ADNAMKNFHVGNVGDHIAFLKIYNSWKETNY----STQWCYENYIQVRSMKRARDIRDQL 966
Query: 623 ERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHP 682
E L+ R +++++ + D+IRK++ AGFF AK + G Y TVK Q V IHP
Sbjct: 967 EGLLERVEIDVSS----NANELDSIRKSIVAGFFPHTAKLQKNG-SYRTVKHPQTVHIHP 1021
Query: 683 STVLGHD-AEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDL 727
++ L WVVY++ VLTSK Y+R VT ++PEWLIE+AP YY L
Sbjct: 1022 ASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQL 1067
>Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 588 bits (1516), Expect = e-167
Identities = 322/647 (49%), Positives = 432/647 (66%), Gaps = 28/647 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I VRR LPV R+E L +Q+++ GETGSGKTTQIPQ+ LF+E + ++AC
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQY-LFEEGYTNKGMKIAC 450
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA RVA EM VKLG EVGYSIRFE+ TS +T+L+YMTDGMLLRE + + D
Sbjct: 451 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 510
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L YS +++DEAHERTL TDIL GL+K V RP+LK+++ SAT+D +F +F+ AP+
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVF 570
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGR PV+I+YT + DYL++ + +VLQIH T+ GDIL+FLTG++EIE A +
Sbjct: 571 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 630
Query: 325 EGDQL---IREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAET 380
+L IRE + V P+Y +LP Q RIF+P P PG RKV+V+TNIAET
Sbjct: 631 RCRRLGSKIRE-----LLVLPIYANLPSDMQARIFQPTP------PGARKVVVATNIAET 679
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
SLTI+GI+YV+DPGF KQK YNPR +ESL V+P SKAS GKCFRLYT
Sbjct: 680 SLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYT 739
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
A++ EL E + PEI R++L + VL LK LGI DL+HFDF+DPP ET++ ALE+L L
Sbjct: 740 AWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYAL 799
Query: 501 ACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSV-PSVFIRPSK 559
L+ G LT GR ++ P+DPML+ M++ S ++SCSEE+LT+ AMLSV S+F RP
Sbjct: 800 GALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKD 859
Query: 560 DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIR 619
+D+A+ F P GDHL LLNVY + ++ Y ++WC +NF+ +RS+ A ++R
Sbjct: 860 KVVHADNARVNFFLPGGDHLVLLNVYTQW-AESGYS---SQWCYENFVQFRSMRRARDVR 915
Query: 620 NQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVL 679
QLE L+ R + L++ D + +RKA+ AG+F A R GY TVK Q V
Sbjct: 916 EQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTA--RLTRSGYRTVKQQQTVF 969
Query: 680 IHP-STVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
IHP S++ W++Y+E VLT+K ++R V + WL+E+AP YY
Sbjct: 970 IHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1016
>Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 583 bits (1503), Expect = e-166
Identities = 320/647 (49%), Positives = 430/647 (66%), Gaps = 28/647 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I VRR LPV R+E L +Q+++ GETGSGKTTQIPQ+ LF+E + ++AC
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQY-LFEEGYTNKGMKIAC 450
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA RVA EM VKLG EVGYSIRFE+ TS +T+L+YMTDGMLLRE + + D
Sbjct: 451 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 510
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L YS +++DEAHERTL TDIL GL+K V RP+LK+++ SAT+D +F +F+ AP+
Sbjct: 511 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVF 570
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGR PV+I+YT + DYL++ + +VLQIH T+ GDIL+FLTG++EIE A +
Sbjct: 571 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 630
Query: 325 EGDQL---IREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAET 380
+L IRE + V P+Y +LP Q RIF+P P PG RKV+V+TNIAET
Sbjct: 631 PCRRLGSKIRE-----LLVLPIYANLPSDMQARIFQPTP------PGARKVVVATNIAET 679
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
S TI+GI+YV+DPGF KQK YNPR +ESL V+P SKAS GKCFRLYT
Sbjct: 680 SPTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYT 739
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
A++ EL E + PEI R++L + VL LK LGI DL+HFDF+DPP ET++ LE+L L
Sbjct: 740 AWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLTLEQLYAL 799
Query: 501 ACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSV-PSVFIRPSK 559
L+ G LT GR ++ P+DPML+ M++ S ++SCSEE+LT+ AMLSV S+F RP
Sbjct: 800 GALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKD 859
Query: 560 DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIR 619
+D+A+ F P GDHL LLNVY + ++ Y ++WC +NF+ +RS+ A ++R
Sbjct: 860 KVVHADNARVNFFLPGGDHLVLLNVYTQW-AESGYS---SQWCCENFVQFRSMRRARDVR 915
Query: 620 NQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVL 679
QLE L+ R + L++ D + +RKA+ AG+F A R GY TVK Q V
Sbjct: 916 EQLEGLLERVEVGLSSCQGD----YIRVRKAITAGYFYHTA--RLTRSGYRTVKQQQTVF 969
Query: 680 IHP-STVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
IHP S++ W++Y+E VLT+K ++R V + WL+E+AP YY
Sbjct: 970 IHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY 1016
>At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 883
Score = 582 bits (1500), Expect = e-166
Identities = 322/673 (47%), Positives = 444/673 (65%), Gaps = 28/673 (4%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R LP+H R+E LK+ +ENQ++V VGETGSGKTTQIPQ++ E + + ++ CTQPR
Sbjct: 219 REFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYL--QEAGYTKRGKIGCTQPR 276
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAAMSVA RVA+E+ VKLG EVGYSIRFE+ TS KT++KYMTDGMLLRE + + L Y
Sbjct: 277 RVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSY 336
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S II+DEAHERTL+TDIL L+K V RPDL++II SATL+A+KF YF+ A + +PG
Sbjct: 337 SVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPG 396
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQ 328
R +PVE + + DYL++ IRTV+QIH TE GDIL+FLTG++EIE + +L+
Sbjct: 397 RRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETV--ETNLKRRM 454
Query: 329 LIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIV 388
+ I + P+Y +LP Q ++FEPAP+ RKV+++TNIAETSLTIDG+
Sbjct: 455 MDLGTKGSEIIICPIYSNLPTPLQAKVFEPAPKG-----TRKVVLATNIAETSLTIDGVK 509
Query: 389 YVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKEL 448
YV+DPG+ K YNPR +ESLLV+PISKAS T PGKCFRLY K+L
Sbjct: 510 YVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYN----IKDL 565
Query: 449 IEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGN 508
+ PEI R+NL+S VL LK LGI D+ +FDFMDPP +++ALE L L LD+ G
Sbjct: 566 EPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKALELLYALGALDEIGE 625
Query: 509 LTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSV-PSVFIRPSKDKKRSDDA 567
+T +G +FP+DPML+ M++GS ++ CS+E++TI AMLSV SVF RP + +D A
Sbjct: 626 ITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKA 685
Query: 568 KNIFAHPD---GDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLER 624
+ F GDH+ LL VY+++K +E Y +WC + F+ +S+ A +IR+QL
Sbjct: 686 RMDFYEDTENVGDHIALLRVYNSWK-EENYS---TQWCCEKFIQSKSMKRARDIRDQLLG 741
Query: 625 LMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPST 684
L+ + +EL + +P D I+KA+ AGFF AK + G Y VK+ Q V +HP++
Sbjct: 742 LLNKIGVELTS----NPNDLDAIKKAILAGFFPHSAKLQKNG-SYRRVKEPQTVYVHPNS 796
Query: 685 VL--GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLERV 742
L ++W+VY+E VLT+K Y+R T ++PEWLIE+AP YY L + K + R+
Sbjct: 797 GLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYKLKDIEDTRPKKTQRRI 856
Query: 743 KQKLDKMVELQQE 755
++ V+ ++
Sbjct: 857 EEASTSKVDTNKK 869
>YER013w [A] KOG0922 DEAH-box RNA helicase
Length = 1145
Score = 580 bits (1496), Expect = e-165
Identities = 312/663 (47%), Positives = 430/663 (64%), Gaps = 33/663 (4%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R+ LPV+A R E ++ ++NQ +V VGETGSGKTTQI Q++ DE + CTQPR
Sbjct: 480 RQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYL--DEEGFSNYGMIGCTQPR 537
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAA+SVA+RVAEE+ K+G +VGY+IRFE+ T T +KYMTDGML REA+ D ++ +Y
Sbjct: 538 RVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKY 597
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S I+LDEAHERT+ATD+L LLK+ +RP+LK+I+ SATL++ KF YF P++ +PG
Sbjct: 598 SVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPG 657
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVR----KISL 324
+T PVE+ Y+ Q DY+++A+ V+ IH E GDIL+FLTG++EI+ ++
Sbjct: 658 KTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKT 717
Query: 325 EGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTI 384
GD + G + + P+Y +LP Q +IFEP P+ RKV+ +TNIAETS+TI
Sbjct: 718 LGDSI------GELLILPVYSALPSEIQSKIFEPTPKG-----SRKVVFATNIAETSITI 766
Query: 385 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAF 444
DGI YVVDPGF+K +YN R +E L+VSPIS+A T PGKC+RLYTE AF
Sbjct: 767 DGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAF 826
Query: 445 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLD 504
E++E + PEI R NLS T+L LK +GI+DL+ FDFMDPP M+ AL EL L LD
Sbjct: 827 YNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLD 886
Query: 505 DDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRS 564
D+G LT LG+ S FP+DP L+ L+ S + CS+E++TI++MLSV +VF RP + +
Sbjct: 887 DEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEA 946
Query: 565 DDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLER 624
D K F HP GDHLTLLNVY ++ E ++C+ NFL++R L A ++++Q+
Sbjct: 947 DSKKAKFHHPYGDHLTLLNVYTRWQQANYSE----QYCKTNFLHFRHLKRARDVKSQISM 1002
Query: 625 LMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPST 684
+ + L+L + D D IRK +GFFM A KR GY T+ +V IHPS+
Sbjct: 1003 IFKKIGLKLISCHSDP----DLIRKTFVSGFFMNAA-KRDSQVGYKTINGGTEVGIHPSS 1057
Query: 685 VL-GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLERVK 743
L G + E+V+Y+ VLTS+ Y+ VTS+ P+WL+E+AP HF K S R K
Sbjct: 1058 SLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAP------HFYKAGDAESQSRKK 1111
Query: 744 QKL 746
K+
Sbjct: 1112 AKI 1114
>CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1008
Score = 566 bits (1460), Expect = e-161
Identities = 312/649 (48%), Positives = 432/649 (66%), Gaps = 21/649 (3%)
Query: 80 EKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQN 139
+K I + R+ LPV+A RD F++ +E+Q+++ GETGSGKTTQ+PQ+ L++
Sbjct: 352 KKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQY-LYEAGFCEGG 410
Query: 140 TQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREA 199
++ CTQPRRVAAMSVA RVA+E+ KLG +VGYSIRFE+ TS KT+LKYMTDGMLLRE
Sbjct: 411 KRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREF 470
Query: 200 MEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFN 259
+ + DL YS +++DEAHERTL TDIL GL+K + R DLK++I SATLDAEKF +F+
Sbjct: 471 LNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD 530
Query: 260 KAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEE-KGDILLFLTGEDEIEDA 318
AP+ +PGR PV+IYYT + DY+D+AI T++QIH T+ GDIL+FLTG++EIE
Sbjct: 531 DAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIE-T 589
Query: 319 VRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIA 378
V++ +E + + + + P+Y +LP Q +IFEP P + RKV+++TNIA
Sbjct: 590 VQEALMERSKALGSK-IKELIPLPVYANLPSDLQAKIFEPTP-----KDARKVVLATNIA 643
Query: 379 ETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRL 438
ETS+TIDGI YV+DPGFSKQ ++ R VE L V ISKA+ T PGKCFRL
Sbjct: 644 ETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRL 703
Query: 439 YTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELN 498
YT A+K EL EQ PEI R+NL + VL LK LGI DLVHFDF+DPP ET++ ALE+L
Sbjct: 704 YTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLY 763
Query: 499 FLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSV-PSVFIRP 557
L L+ G LT LGR ++FP DP ++ M+I S ++ CSEE++TI AMLS +VF RP
Sbjct: 764 ALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRP 823
Query: 558 SKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADN 617
+D A+ F P GDH+TL+NVY+ ++ + +WC +N++ +R++ A +
Sbjct: 824 KAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQ----RWCVENYVQHRTMKRARD 879
Query: 618 IRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQD 677
+R+QL L+ R +E ++ D+ + IRKA+ AG+F V+K + G Y TVK
Sbjct: 880 VRDQLVGLLERVEIETKSST-DTIK----IRKAITAGYFYNVSKLDNTGH-YKTVKHKHT 933
Query: 678 VLIHPSTVLGHDA-EWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
HP++ L + WVVY E V TSK ++R ++ + WL+E+AP YY
Sbjct: 934 THPHPNSCLFEETPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYY 982
>Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1227
Score = 561 bits (1447), Expect = e-159
Identities = 296/670 (44%), Positives = 439/670 (65%), Gaps = 23/670 (3%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
IL+ R+ LP+ A + E L I ++N I++ VGETGSGKTTQ+ Q++ E + + C
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYL--HEDGYTDYGMIGC 582
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RV+EEM LGEEVGY+IRFE+ TS T++KYMTDG+LLRE++ + D
Sbjct: 583 TQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREAD 642
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L YS II+DEAHER+L TD+L GLL++V+ RR DLK+I+ SAT+DAEKF +F P+
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIF 702
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+PGRT PV+I ++ Q DY+++A++ LQ+H + GDIL+F+ G+++IE +I
Sbjct: 703 HIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVE 762
Query: 325 EGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTI 384
++L + ++V P+Y LP Q +IF+ AP+ RK IV+TNIAETSLT+
Sbjct: 763 HLEEL---ENAPALAVLPIYSQLPSDLQAKIFQKAPDGV-----RKCIVATNIAETSLTV 814
Query: 385 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAF 444
DGI++V+D G+ K KV+NPRI +++L + PIS+A+ T PG+CFRLYT+ A+
Sbjct: 815 DGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAY 874
Query: 445 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLD 504
K EL+ + PEI R+NL++ VL LK LG+ DL+ F FMDPP + M+ ++ +L L LD
Sbjct: 875 KNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALD 934
Query: 505 DDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRS 564
+ G LT GRL +FPLDP L+ MLI S + CS E+L IV+MLSVP++F RP ++ S
Sbjct: 935 NTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEES 994
Query: 565 DDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLER 624
D + FA P+ DHLT LNVY +K++ WC D+F++ +++ +R QL+
Sbjct: 995 DQIREKFAVPESDHLTYLNVYLQWKNNNYSTI----WCNDHFIHAKAMRKVREVRAQLKD 1050
Query: 625 LMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPST 684
+MV+ + L + D +D +RK + A +F Q AK + G+ Y+ ++ +HP++
Sbjct: 1051 IMVQQRMSLASCGTD----WDIVRKCICAAYFHQAAKLKGIGE-YVNIRTGMPCHLHPTS 1105
Query: 685 VL---GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLER 741
L G+ +++VY+E V+T+K Y++ VT+V EWL EL P +Y + K + + R
Sbjct: 1106 SLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSR-QENRRR 1164
Query: 742 VKQKLDKMVE 751
K++ M E
Sbjct: 1165 AKEEASAMEE 1174
>CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1131
Score = 559 bits (1440), Expect = e-159
Identities = 296/663 (44%), Positives = 433/663 (64%), Gaps = 23/663 (3%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I + R LPV A R + + + +EN +++ VGETGSGKTTQ+ Q++L D + + C
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFG--DSGLIGC 491
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RVA+EM V LG++VGY+IRFE+ TS KTI+KYMTDG+LLRE + D
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGS 551
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFN-KAPL 263
L +YS II+DEAHER+L TD+L GLL++VI +R DLK+I+ SAT+DA+KF +F P
Sbjct: 552 LDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPT 611
Query: 264 LAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKIS 323
+PGRT PVE+++ DY+D+A++ + IH GDIL+F+ G+++IE I
Sbjct: 612 FTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIK 671
Query: 324 LEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLT 383
++L P++V P+Y LP Q +IF+ AP RK IV+TNIAETSLT
Sbjct: 672 ---EKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGM-----RKAIVATNIAETSLT 723
Query: 384 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEA 443
+DGI++V+DPGF K KVYNPRI +++L + P+S+AS T PG+C+RLYTE
Sbjct: 724 VDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQ 783
Query: 444 FKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACL 503
FK EL++ + PEI R+NL++ VL LK LG+DDL+ F FMD P + M+ ++ +L L L
Sbjct: 784 FKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGAL 843
Query: 504 DDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKR 563
D+ G LTP+GR +FPLDP L+ MLI S E CS+E+LTIV+MLSVP++F RP ++
Sbjct: 844 DNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEE 903
Query: 564 SDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLE 623
+D K F P+ DHLT LNVY +++ ++Y KWC DN+L+ ++L +R QL+
Sbjct: 904 ADAKKEKFQVPESDHLTFLNVYIQWRT---HKYSA-KWCADNYLHVKALKKVREVRAQLK 959
Query: 624 RLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPS 683
+M L L + + +D +RK + + +F A+ + G+ Y+ V+ +HP+
Sbjct: 960 EIMQDLKLPLISNGSE----WDIVRKCICSAYFHNAARLKGIGE-YVNVRTGIPCFLHPT 1014
Query: 684 TVL---GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLE 740
+ L G ++VVY+E ++T+K Y++ VT+V WL EL P +Y + ++ +L +E
Sbjct: 1015 SALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKME 1074
Query: 741 RVK 743
V+
Sbjct: 1075 SVR 1077
>At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1226
Score = 550 bits (1417), Expect = e-156
Identities = 291/665 (43%), Positives = 425/665 (63%), Gaps = 28/665 (4%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R+ LP+ + RDE L++ +ENQ++V VGETGSGKTTQ+ Q + N V CTQPR
Sbjct: 530 RQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQD------GYTINGIVGCTQPR 583
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAAMSVA+RV+EEM+ +LG+++GY+IRFE+ T T++KYMTDG+LLRE ++D DL +Y
Sbjct: 584 RVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKY 643
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
+++DEAHER+L TD+L G+LK+V+ RR D K+I+ SATL+A+KF +F P+ +PG
Sbjct: 644 RVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPG 703
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQ 328
RT PV I Y+ DY+++A++ + IH T GDIL+F+TG+DEIE A + +Q
Sbjct: 704 RTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQ 763
Query: 329 LIREQG--CGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDG 386
L+ + + P+Y LP Q +IF+ + RK IV+TNIAETSLT+DG
Sbjct: 764 LVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDG-----ARKCIVATNIAETSLTVDG 818
Query: 387 IVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKK 446
I YV+D G+ K KV+NPR+ +++L V PIS+A+ T PG C+RLYTE A+
Sbjct: 819 IYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLN 878
Query: 447 ELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDD 506
E++ PEI R+NL + VL LK L ID+L+ FDFMDPP E ++ ++ +L L L++
Sbjct: 879 EMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNV 938
Query: 507 GNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDD 566
G LT LG +FPLDP LA ML+ C +E+LTIV+MLSVPSVF RP + + SD
Sbjct: 939 GGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDA 998
Query: 567 AKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLM 626
A+ F P+ DHLTLLNVY +K ++Y WC D++L + L A +R+QL ++
Sbjct: 999 AREKFFVPESDHLTLLNVYQQWKE---HDYR-GDWCNDHYLQVKGLRKAREVRSQLLDIL 1054
Query: 627 VRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTV- 685
+ +EL + D +D +RKA+ + +F A+ + G+ Y+ + +HPS+
Sbjct: 1055 KQLKIELRSCGPD----WDIVRKAICSAYFHNSARLKGVGE-YVNCRTGMPCHLHPSSAL 1109
Query: 686 --LGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLERVK 743
LG+ ++VVY+E +LT+K Y++ TSV P WL EL P ++ + + D + + K
Sbjct: 1110 YGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGPMFFSV---KDSDTSMLEHKKK 1166
Query: 744 QKLDK 748
QK +K
Sbjct: 1167 QKEEK 1171
>Hs20544129 [A] KOG0922 DEAH-box RNA helicase
Length = 703
Score = 525 bits (1352), Expect = e-148
Identities = 298/687 (43%), Positives = 427/687 (61%), Gaps = 41/687 (5%)
Query: 71 NPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVL 130
NP+ S+ ++ R+ LPV R+ L + + Q +V VGETG GK+TQIPQ+ L
Sbjct: 40 NPYAALSIEQQ-------RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQY-L 91
Query: 131 FDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSN-KTILKY 189
+ + V TQPRRVAA++VA RVAEE LG EVGY IRF++ T T +K+
Sbjct: 92 AEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKF 151
Query: 190 MTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATL 249
+TDGML+RE M D L +YS I+LDEAHERTL TDI +GLLK++ +R DL++I+ SATL
Sbjct: 152 LTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATL 211
Query: 250 DAEKFQRYFNK----------APLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHAT 299
DA+KF+ +FN+ +L V GRT PV+I+Y DY+ S + TV++IH T
Sbjct: 212 DADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQT 271
Query: 300 EEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPA 359
E GD+L FLTG++E+E V + + L R + V P+Y LP +Q ++FE
Sbjct: 272 EGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERV 331
Query: 360 PESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 419
R RKVIV+TN+AETS+TI GIVYV+D GF K + YNPR +E L+V P+S+AS
Sbjct: 332 -----SRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQAS 386
Query: 420 XXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 479
+R GKC+RLYTEEAF K L + + PE+ RSNL+ +L+LK LGID+++ F
Sbjct: 387 ANQRAGRGGRSRSGKCYRLYTEEAFDK-LPQSTVPEMQRSNLAPVILQLKALGIDNVLRF 445
Query: 480 DFMDPPAPETMMRALEELNFLACLDDDGNLT-PLGRLASQFPLDPMLAVMLIGSPEFSCS 538
FM PP ++M++ALE L L LD D LT PLG ++FPL+PM A ML+ S F CS
Sbjct: 446 HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCS 505
Query: 539 EEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGI 598
+E+L+I AM+ + ++F+ P K + FA +GDHLT+LN+Y AF
Sbjct: 506 QEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNK----D 561
Query: 599 NKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQ 658
+KWC+++FLNY+ L A +R QL++L+V++ + +++ D D + + + +GFF
Sbjct: 562 SKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDP----DLVLRCIVSGFFAN 617
Query: 659 VAKKRSGGKGYITVKDNQDVLIHPSTVLGHD--AEWVVYNEFVLTSKNYIRTVTSVRPEW 716
A+ S G Y T++D+ ++ IHP++VL + WV+YNE + TSK Y+R VT++ W
Sbjct: 618 AARFHSTG-AYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAW 676
Query: 717 LIELAPAYYDLDHFQKGDIKLSLERVK 743
L+ELAP +Y Q + L +R K
Sbjct: 677 LLELAPHFYQ----QGTHLSLKAKRAK 699
>YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1071
Score = 514 bits (1324), Expect = e-145
Identities = 291/703 (41%), Positives = 439/703 (62%), Gaps = 50/703 (7%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I + LPV R + L + +ENQ++V +GETGSGKTTQ+ Q++ + + + +
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNK-TILKYMTDGMLLREAMEDH 203
TQPRRVAA+SVA+RVA EM V LG+EVGYSIRFE+ T ++ T LK++TDG+LLRE + D
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 204 DLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPL 263
L +YSC+I+DEAHER+L TDIL+G K ++ RR DLK+II SAT++A+KF +F AP
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 264 LAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEE--KGDILLFLTGEDEIEDAVRK 321
+PGRT PV+ YT +DY+++A+ ++IH + GDIL+F+TG+++IE
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 322 ISLEGDQLIRE-------QGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVS 374
+ + Q+ + + I + P+Y +LP Q +IF+ + H + RK+I++
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQ---DLHGTK--RKIIIA 637
Query: 375 TNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 434
TNIAETSLTI GI YV+D G+SK KVYNP+I ++SL+++PISKA+ T PG
Sbjct: 638 TNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGT 697
Query: 435 CFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGI-DDLVHFDFMDPPAPETMMRA 493
+RLYTE+ FK+++ Q+ PEI R+NLS+T+L LK L + D+L F F+D P +T + +
Sbjct: 698 AYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSS 757
Query: 494 LEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSV 553
L EL F+ +D G LTPLG ++FPL P L+ +L+ + CS+EMLTIV+MLSVP V
Sbjct: 758 LYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQV 817
Query: 554 FIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLS 613
F RP + +K +D A+N F DHLTLLNV+ ++++ + WC +F+ Y+SL
Sbjct: 818 FYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSH----WCNKHFVQYKSLV 873
Query: 614 AADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVK 673
A +IR+QL ++ + + ++ D +D I+K + +GF Q A K +G + Y+ +K
Sbjct: 874 RARDIRDQLLTILKSQKIPVISSGKD----WDIIKKCICSGFAHQAA-KITGLRNYVHLK 928
Query: 674 DNQDVLIHPSTV---LGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDL--- 727
V +HP++ LG +VVY+E ++TSK YI VTSV P WL+E YD+
Sbjct: 929 TGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDIKRI 988
Query: 728 -------------DHFQ------KGDIKLSLERVKQKLDKMVE 751
+H++ + DI +++ R K D +++
Sbjct: 989 KNDQEATTTGLFGEHYEHTLDKVEDDIDINIRRCKDMRDSVIQ 1031
>SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase
Length = 719
Score = 499 bits (1284), Expect = e-141
Identities = 279/642 (43%), Positives = 406/642 (62%), Gaps = 19/642 (2%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
IL+ R++LP+ D + Q+N+++V VGETGSGK+TQIPQF+ +E P+ Q VA
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFL--NECPYAQEGCVAI 146
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAA+++A+RVA E +LGE+VGYSIRF++ TS KT +KY+TDGMLLRE + D
Sbjct: 147 TQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPI 206
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
L +Y +ILDEAHERTL TD+L+G +K++I +RP L++IIMSATL+AE+F +F+ A +
Sbjct: 207 LSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEIC 266
Query: 265 AVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISL 324
+ GR +PV+I+YT + DYLD+ +RT+ Q+H GDIL+FLTG+DEIE I
Sbjct: 267 YISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKS 326
Query: 325 EGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTI 384
QL I PL+ SLP QQ ++F PA +H RKV++STNIAETS+TI
Sbjct: 327 YSKQL--PSNLPQIQACPLFASLPQEQQLQVFLPALANH-----RKVVLSTNIAETSVTI 379
Query: 385 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAF 444
GI YV+D G +K K +N ++ +ESL V PIS+++ G+C+R+YTE F
Sbjct: 380 SGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF 439
Query: 445 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLD 504
K L +++ PEI R +LS VL LK G +D+++F +MDPP+ E ++RALE L + LD
Sbjct: 440 DK-LPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALD 498
Query: 505 DDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRS 564
D+G++ LG S PL P LA ++ + E +C E++ +V+ LS S+F+ P + + +
Sbjct: 499 DNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEA 558
Query: 565 DDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLER 624
+A+ F H +GD LT LN + E+ +WC NF+N R+L +IR QL
Sbjct: 559 IEARLKFLHSEGDLLTCLNALRQYL--ESSHDSRKQWCSQNFINRRALKTILDIRKQLRE 616
Query: 625 LMVRYNLELNTTDYDSPRY-FDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPS 683
++ ELN+ SP +N+ + +G+ A G Y T+ NQ + IHPS
Sbjct: 617 HCLKDGWELNS----SPEVNSENLLLSFLSGYITNTALLHPDG-SYRTIIGNQTISIHPS 671
Query: 684 TVL-GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAY 724
+ L G E ++Y+E V T+K+Y+R V+S+R WL +AP Y
Sbjct: 672 SSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 876
Score = 484 bits (1246), Expect = e-136
Identities = 277/668 (41%), Positives = 417/668 (61%), Gaps = 47/668 (7%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I + R+ LPVH +DE L+ ++NQ+++ +GETGSGKTTQ+PQ+++ D Q+A
Sbjct: 216 IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAI 275
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREAMEDH 203
TQPRRVAA SVA RVA+EM+V LG+EVGY IRFE+KT+ NKT+LKYMTDGMLLRE + D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 204 DLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPL 263
L +YSCI++DEAHERTLATDIL+GLLK ++ +RP LK++I SAT++A+KF +F+ P+
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPI 395
Query: 264 LAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEE-KGDILLFLTGEDEIEDAVRKI 322
VPGR +PV+I+YT + + +Y+ +AI T+ QIH T+ GDIL+FLTG++EIE K+
Sbjct: 396 FNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKL 455
Query: 323 SLEGDQLIREQG--CGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAET 380
++++ + G + + P+Y +LP QQ +IF+P PE+ RKV+++TNIAET
Sbjct: 456 ----EEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPEN-----CRKVVLATNIAET 506
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
SLTIDGI YV+DPGF K+ Y P + LL P S+AS PGKCFR++T
Sbjct: 507 SLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFT 566
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
+ ++ EL PEI R+NLS+TVL L LG+ DL+ F MD P+ T+ ++LE L L
Sbjct: 567 KWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYIL 626
Query: 501 ACLDDDGNLTPLGRLASQFPLDPMLA-VMLIGSPEFSCS---EEMLTIVAML-SVPSVFI 555
L+ G +T LG++ +FP +P A V+ + C EE LTIV+ML PS+FI
Sbjct: 627 GALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFI 686
Query: 556 RPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAA 615
++ D A ++ + + DH+ L +++ +++ + WC+D+ + ++++
Sbjct: 687 -----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKF----SRSWCQDHKIQFKTMLRV 737
Query: 616 DNIRNQLERL-----MVRYNLELNTTDYDSPRYFD-NIRKALAAGFFMQVAKKRSGGKGY 669
NIRNQL R +V N + + Y + I + +GF M + + G GY
Sbjct: 738 RNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIV--QLGPTGY 795
Query: 670 ITV---KDNQDVLIHPSTVL--------GHDAEWVVYNEFVLTSKNYIRTVTSV-RPEWL 717
T+ +V +HP+++L +++V+Y + +LTSK +IR + + EWL
Sbjct: 796 QTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWL 855
Query: 718 IELAPAYY 725
I++ P +
Sbjct: 856 IDMVPQIF 863
>Hs20336302 [A] KOG0922 DEAH-box RNA helicase
Length = 707
Score = 482 bits (1240), Expect = e-135
Identities = 275/648 (42%), Positives = 404/648 (61%), Gaps = 31/648 (4%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
RR LP+ R + L + V +GETGSGKTTQIPQ++ E + +A TQPR
Sbjct: 71 RRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLY--EGGISRQGIIAVTQPR 128
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAA+S+A RV++E +LG+ VGY++RF++ TS T +K++TDGMLLREA+ D L++Y
Sbjct: 129 RVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKY 188
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPD-----LKIIIMSATLDAEKFQRYFNKAPL 263
SC+ILDEAHERT+ TD+L G++K RR + LK+I+MSAT+D + F +YFN AP+
Sbjct: 189 SCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPV 248
Query: 264 LAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIH-ATEEKGDILLFLTGEDEIEDAVRKI 322
L + GR HP++++YT + Q DYL +A+ +V QIH DIL+FLTG++EIE A+ K
Sbjct: 249 LYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIE-AMSKT 307
Query: 323 SLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSL 382
+ + + + GC + V PLY SLP QQ R+F+ AP+ + RKVI+STNIAETS+
Sbjct: 308 CRDIAKHLPD-GCPAMLVLPLYASLPYAQQLRVFQGAPKGY-----RKVIISTNIAETSI 361
Query: 383 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEE 442
TI GI YVVD G K K YNP +E L V +SK G C+RLYTE+
Sbjct: 362 TITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTED 421
Query: 443 AFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLAC 502
F+K + + PEI R NL+S +L+L + + +++ FDFM P+P+ + A+ +L+ L
Sbjct: 422 EFEK-FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGA 480
Query: 503 L---DDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSK 559
L DD LTP+GR + FPL+P A ++ SP+F C+EE+LTIV++LSV SV P
Sbjct: 481 LEHKDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPS 540
Query: 560 DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINK-WCRDNFLNYRSLSAADNI 618
++ + F +GDH+TLLN+Y FK+ G NK WC++NF+N ++++ +
Sbjct: 541 RREEVQGVRKKFISSEGDHMTLLNIYRTFKN-----LGGNKDWCKENFVNSKNMTLVAEV 595
Query: 619 RNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDV 678
R QL + ++ ++ + ++ D +++R+ LA FM A+ + G Y T +Q V
Sbjct: 596 RAQLRDICLKMSMPIASSRGD----VESVRRCLAHSLFMSTAELQPDGT-YATTDTHQPV 650
Query: 679 LIHPSTVLGH-DAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
IHPS+VL H VVY E + T+K Y+R + + +WL E AP Y+
Sbjct: 651 AIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYF 698
>CE27311 [A] KOG0922 DEAH-box RNA helicase
Length = 732
Score = 482 bits (1240), Expect = e-135
Identities = 273/656 (41%), Positives = 397/656 (59%), Gaps = 33/656 (5%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I + R LP+ R L + + + ++ VGETG GK+TQ+PQF+L + Q+
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLL-EAGWAADGRQIVI 128
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVA +++A RVAEE D LG +VGY++RF++ + T +K+MTDG+LLRE + D
Sbjct: 129 TQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPL 188
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYF------ 258
L +YS I++DEAHER+ TDIL+GLL+++I R DL+II+ SATLDAE F+ +F
Sbjct: 189 LSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNETG 248
Query: 259 ----NKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDE 314
+ A +++V GRTHPV +++T DY SA+ TV+ IH E GDIL+FLTG+DE
Sbjct: 249 NSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDE 308
Query: 315 IEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVS 374
+ED K+ L + C + V P YG+LP +Q + F+ P RKV+V+
Sbjct: 309 VEDVCEKLRELAGNL---KNCDRLWVVPCYGALPAREQMKAFDSTPHG-----TRKVVVA 360
Query: 375 TNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 434
TNIAE S+TI GI YV+D G+ K + + VE+L+ +SKAS RPGK
Sbjct: 361 TNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGK 420
Query: 435 CFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRAL 494
C+RLY E F++ E + PEI R ++ST+L+LK LG+ ++ F ++ PP M+ L
Sbjct: 421 CYRLYPESEFER-FAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGL 479
Query: 495 EELNFLACLDDDGNLT-PLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSV 553
E L L +D+ LT PLG ++FPL PM + L+ S EF CS EM+TIVAM+ + V
Sbjct: 480 ELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDV 539
Query: 554 FIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLS 613
FI P + + ++D + FA +GDH+T+LNV+ F + + KWC D+F+NYR L
Sbjct: 540 FITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSK----KWCSDHFVNYRGLM 595
Query: 614 AADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVK 673
ADN+R+QL RL+ R+ +E + +NIR+ L GFF Q A+ GK Y+TVK
Sbjct: 596 RADNVRSQLVRLLKRFEIE-KVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGK-YMTVK 653
Query: 674 DNQDVLIHPSTVLGHDAE---WVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYD 726
++ ++ + + + WV++ E + S IR VT + PEWL ELAP YY+
Sbjct: 654 ESFPFNMYKGSSIMFKKDYPKWVIFTEVMQDS---IRDVTVIEPEWLYELAPHYYE 706
>At1g26370 [A] KOG0922 DEAH-box RNA helicase
Length = 710
Score = 471 bits (1211), Expect = e-132
Identities = 294/712 (41%), Positives = 423/712 (59%), Gaps = 81/712 (11%)
Query: 69 SVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQF 128
+V+PF S+ +K I + RR LP+ + ++ Q+N I++ VGETGSGKTTQ+PQF
Sbjct: 21 TVSPF---SMRQK---IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQF 74
Query: 129 VLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILK 188
L++ + + TQPRR+AA++VA+RVAEE +V+LG++VGYSIRF++ TS T LK
Sbjct: 75 -LYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLK 133
Query: 189 YMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPD--------- 239
YMTDG+LLREA+ D L RYS II+DEAH+R++ TD+L+ LLK++ R
Sbjct: 134 YMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFG 193
Query: 240 --------------------------------LKIIIMSATLDAEKFQRYFNKAPLLAVP 267
LK+IIMSA+LDA F YF A + V
Sbjct: 194 NVASQVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQ 253
Query: 268 GRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGD 327
GR PV+I YT + DY+D+ + T+ Q E+ GDIL+FLTG+DEIE +V ++ E
Sbjct: 254 GRQFPVDILYTVHPESDYVDATLVTIFQ----EKPGDILVFLTGQDEIE-SVERLVQERL 308
Query: 328 QLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGI 387
Q I E + + ++ +LP QQ ++F PAP RKVI++TNIAETS+TI GI
Sbjct: 309 QNIPEDKRKLLPL-AIFSALPSEQQMKVFAPAPTGF-----RKVILATNIAETSITIPGI 362
Query: 388 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKE 447
YV+DPGF K + Y+P +ESL V P SKA PGK FRLY E F+K
Sbjct: 363 RYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEK- 421
Query: 448 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDG 507
L + + PEI R NLS+ +L+LK LGIDD+V FDF+D P+ +++AL EL+ L L DDG
Sbjct: 422 LEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDG 481
Query: 508 NL-TPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDD 566
L P+G S+ PL+P+ + LI + +F+C EEML VA+LSV S+F P + ++ +
Sbjct: 482 KLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEART 541
Query: 567 AKNIFAHPDGDHLTLLNVYHAFKSDEAYEYG------------INKWCRDNFLNYRSLSA 614
+KN FA +GDHLT L+VY +SDE E + KWC++N++N RSL
Sbjct: 542 SKNHFASVEGDHLTYLSVYR--ESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKH 599
Query: 615 ADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKD 674
A +I Q+ + + +++ D + R+ LAA FF++ A+++ G Y ++
Sbjct: 600 ARDIYRQIREHVEQIGFNVSSCGNDMLAF----RRCLAASFFLKAAQRQLDGT-YRALES 654
Query: 675 NQDVLIHPSTVLGH-DAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
+ V IHP++VL E V++NE + TSK YI+ +T + WL ELAP ++
Sbjct: 655 GEVVHIHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 706
>Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 743
Score = 467 bits (1202), Expect = e-131
Identities = 263/700 (37%), Positives = 410/700 (58%), Gaps = 19/700 (2%)
Query: 66 ENGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQI 125
E+ +NPF G S +Y+ +LK R DLP+ ++ F++ +NQI++ G+ GK+ Q+
Sbjct: 36 EDLELNPFDGLPYSSRYYKLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQV 95
Query: 126 PQFVL-FDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNK 184
PQ+ + H Q+ V CTQ + + +A RVA+EMDV +G EVGY I FEN +N+
Sbjct: 96 PQWCAEYCLSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNE 155
Query: 185 TILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIII 244
TIL+Y TD ML RE M + L Y IILD+ HER++ATD+L+GLLK V+ RP+LK+II
Sbjct: 156 TILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLII 215
Query: 245 MSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGD 304
S+ K Y+ P++ V + HPVE+ Y E Q+D +S +R + +IH + EKGD
Sbjct: 216 NSSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGD 274
Query: 305 ILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHN 364
I++FL E +IE + +G L G + V PLY P ++ +F+P E+
Sbjct: 275 IVVFLACEQDIEKVCETV-YQGSNL--NPDLGELVVVPLY----PKEKCSLFKPLDETEK 327
Query: 365 GRP--GRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
R+V+++T+ E + + + +V+D G ++KVYNPRIR SL++ PIS++
Sbjct: 328 RCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEI 387
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 482
+ GK F LYTEE K++ E+ +NL+S VL +K++ I L H DFM
Sbjct: 388 RKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFM 447
Query: 483 DPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEML 542
+ PAPE++M+ALE+L++LA LD+DGNL+ G + S+FPLDP L+ ++ S EF C +E+L
Sbjct: 448 NRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVL 507
Query: 543 TIVAMLSVPSVFIR-PSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKS---DEAYEYGI 598
TI AM++ P+ F P ++ + F HP+GDH TL+++Y A++ + + EY +
Sbjct: 508 TIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCV 567
Query: 599 NKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQ 658
KWCRD FLN +L AD IR +L ++ R L + S NI+KAL +G+FMQ
Sbjct: 568 EKWCRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQ 627
Query: 659 VAKKRSGGKGYITVKDNQDVLIHP---STVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPE 715
+A+ G Y+ + Q +HP ++ EWV++++F ++ NYIR + + PE
Sbjct: 628 IARDVDGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPE 687
Query: 716 WLIELAPAYYDLDHFQKGDIKLSLERVKQKLDKMVELQQE 755
++L P YY + + K L++V L + + +E
Sbjct: 688 LFMQLVPQYY-FSNLPPSESKDILQQVVDHLSPVSTMNKE 726
>At1g27900 [A] KOG0922 DEAH-box RNA helicase
Length = 708
Score = 454 bits (1167), Expect = e-127
Identities = 259/657 (39%), Positives = 407/657 (61%), Gaps = 45/657 (6%)
Query: 91 DLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRV 150
+LP+ ++ ++ ++N ++V +GETGSGK+TQ+ Q + + ++ +A TQPRRV
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ--ILHRHGYTKSGVIAITQPRRV 60
Query: 151 AAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSC 210
AA+SVA+RVA+E+DV LGE+VGY+IRFE++T++KT +KY+TDG+LLRE++ + L YS
Sbjct: 61 AAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSV 120
Query: 211 IILDEAHERTLATDILMGLLKQVID-RRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGR 269
IILDEAHER+L TDIL+GL+K+++ R + K++I SATLD EK +F+ P+L VPG+
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180
Query: 270 THPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQL 329
+PVEI Y+ E Y++S+++ + IH E +GDIL+F+TG+D+IE V ++ E +
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLE-EKVRS 239
Query: 330 IREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVY 389
+ E C +YPL+GSLPP Q R+F P P + R+ IVSTNIAETSLT+DG+VY
Sbjct: 240 LAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPN-----CRRFIVSTNIAETSLTVDGVVY 294
Query: 390 VVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELI 449
V+D G+ KQ+ YNP + SL V ISK TRPGKC+RLY ++ + +
Sbjct: 295 VIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFL 354
Query: 450 EQSYPEILRSNLSSTVLELKKLGID--DLVHFDFMDPPAPETMMRALEELNFLACLDDDG 507
+ + PEI R++L+ +VL LK L + D++ FDF+D P+ E++ AL++L F+ +D++G
Sbjct: 355 DATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENG 414
Query: 508 NLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFI----RPSKDKKR 563
+T +GR S PL+P L+ LI + E C + LT+VAMLS + + +PS+ K++
Sbjct: 415 AITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRK 474
Query: 564 SDDAKNI-FAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLN-------------- 608
D+ N+ GDH+ LL + F+S + Y WC++N +
Sbjct: 475 HDEDSNLPNGSGYGDHIQLLQI---FESWDRTNYD-PVWCKENGMQPYCIVTSEGGQLYA 530
Query: 609 ---YRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSG 665
R + ++R QL ++M + + + + S + +RKAL G Q+A++
Sbjct: 531 VSAVRGMVFVKDVRRQLCQIMQKISKDGRKS--SSRDDYRKLRKALCVGNANQIAERMLR 588
Query: 666 GKGYITVKDNQDVLIHPSTVLGHDAE-----WVVYNEFVLTSKNYIRTVTSVRPEWL 717
GY T+ Q L+HPS+VL D + +VVY+E + T++ ++R V +V W+
Sbjct: 589 HNGYRTL-SFQSQLVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWV 644
>7295673 [A] KOG0922 DEAH-box RNA helicase
Length = 671
Score = 434 bits (1115), Expect = e-121
Identities = 255/655 (38%), Positives = 390/655 (58%), Gaps = 35/655 (5%)
Query: 84 GILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVA 143
G+++ R LP+ RD+ L +++Q+++ VGETGSGK+TQ+PQ+ L++ H + +
Sbjct: 39 GLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQY-LYEWGWHTKGL-IG 96
Query: 144 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 203
T+PRRV+ +++A RVA+E +G+ VGY +RF S+ T +K+MT+G+LLRE + D
Sbjct: 97 ITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADP 156
Query: 204 DLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFN---- 259
L +Y II+DEAHER + TD+++GLLK+++ +R LK+II SAT+DA F +F+
Sbjct: 157 LLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGS 216
Query: 260 --KAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIED 317
+ L++ GR HPV +Y E DY+ + TV ++H E GDIL FLTG++E+ +
Sbjct: 217 GEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLE 276
Query: 318 AVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNI 377
A+ + + I + V P+YGS+ Q +F P+ RKV+++TNI
Sbjct: 277 ALDLLR----EYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKG-----TRKVVLATNI 327
Query: 378 AETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFR 437
AETS+TI GIVYV+D G+ K K YNP+ +SL++ P+SKAS RPGK +R
Sbjct: 328 AETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYR 387
Query: 438 LYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEEL 497
LYT+ + + L + PE+ RS LS +L+LK LGI +++ FDF PP + ++ ALE L
Sbjct: 388 LYTKSDY-EALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESL 446
Query: 498 NFLACLDDDGNLT-PLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIR 556
L +D+ GNLT P+G L ++ P ML+ ML S + CSEE++TI+A+L V S+F R
Sbjct: 447 FALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSR 506
Query: 557 PSKDKKRSDD--AKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINK-WCRDNFLNYRSLS 613
P+ + A F +GD +T+LN Y F E G+ K +C FL YR+L
Sbjct: 507 PASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGF-----VEEGMTKEFCGQYFLIYRNLK 561
Query: 614 AADNIRNQLERL-MVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITV 672
A ++R QL + +Y + + + D + + K + AGFF QVA G Y +
Sbjct: 562 RAHSLREQLITVARKKYGIPIFSCKGD----VEKLCKCITAGFFTQVAYLHHSGV-YRQI 616
Query: 673 KDNQDVLIHPSTVLG--HDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
++ IHP++ L A++VVY E + T+K ++ VT ++ EWL ELAP YY
Sbjct: 617 SSGTELAIHPNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYY 671
>YKL078w [A] KOG0922 DEAH-box RNA helicase
Length = 735
Score = 432 bits (1111), Expect = e-121
Identities = 261/668 (39%), Positives = 379/668 (56%), Gaps = 26/668 (3%)
Query: 71 NPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVL 130
N T SL + +LK+R LPV+ + E + + N + V +GETGSGK+TQIPQFVL
Sbjct: 60 NVLTYKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVL 119
Query: 131 FDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYM 190
++ +A TQPRRVAA+++A RVA+E KLGE+VGYS+RF+N T+ +T LKY+
Sbjct: 120 EKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYL 179
Query: 191 TDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVID-RRPDLKIIIMSATL 249
TDGMLLRE M + DL+ YS I++DEAHERT+ TD+++G LK +I RPDL+II+MSATL
Sbjct: 180 TDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATL 239
Query: 250 DAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFL 309
AEKF +FN AP+L V GR V+ YY D +D+ IR +QI+ EE GDIL FL
Sbjct: 240 QAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFL 299
Query: 310 TGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGR 369
G++EI+ AV + + E I YPLY +LP QQ +F P R
Sbjct: 300 PGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFK-----R 354
Query: 370 KVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXX 429
KV+ STNIAETS+TI G+ +VVD G K KV+ ++ + +LL PIS+AS
Sbjct: 355 KVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGR 414
Query: 430 TRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPET 489
GK FRLY E + K L +QS PEI RS+++S VL LK+ G+DDL+++ + + P E
Sbjct: 415 ESEGKSFRLYCESDYVK-LPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEA 473
Query: 490 MMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLS 549
++ L+EL L LD G +T G+ + PL P L+ +LI + E C +++ IV+ LS
Sbjct: 474 IVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLS 533
Query: 550 VPSVFIRPSKDKKRSDDAKNI----FAHPDGDHLTLLNVYHAF-----KSDEAYEYGINK 600
V ++ + PS +++ + + + GD + L ++ + KS +A N
Sbjct: 534 VENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSER-ND 592
Query: 601 WCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPR------YFDNIRKALAAG 654
WC+ ++ R +R+QL R ++ D +S + I K G
Sbjct: 593 WCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTG 652
Query: 655 FFMQVAKKRSGGKGYITVKDNQDVLIHPSTVL--GHDAEWVVYNEFVLTSKNYIRTVTSV 712
F A + Y TV + + IHPS++L ++Y E+V T+K Y R V+ +
Sbjct: 653 FIKNTAIGMP-DRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARNVSRI 711
Query: 713 RPEWLIEL 720
WL E+
Sbjct: 712 ELSWLQEV 719
>Hs21362038 [A] KOG0922 DEAH-box RNA helicase
Length = 779
Score = 422 bits (1086), Expect = e-118
Identities = 250/664 (37%), Positives = 389/664 (57%), Gaps = 42/664 (6%)
Query: 93 PVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVAA 152
P+ QR + ++ ++N ++ G TGSGKTTQ+P+++ E Q+ + TQPR+VAA
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLY--EAGFSQHGMIGVTQPRKVAA 111
Query: 153 MSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCII 212
+SVAQRVAEEM LG +VGY +RF++ +S +T +KYMTDG LL+ + D +L ++S II
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 213 LDEAHERTLATDILMGLLKQVI-----DRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVP 267
LDEAHERTL TDIL GLLK++ +R+ LK+++MSAT++ K +F P+ +P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 268 GRTHPV-EIYYTPEFQRD-----YLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRK 321
GR +PV E + RD Y+ + ++ + IH E GDIL+FLTG+ EIE +
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 322 I-----SLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVST 375
+ S++ D +++ + + P YGS+ QQ+RIF P P PG RK ++ST
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPP------PGIRKCVIST 345
Query: 376 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 435
NI+ TSLTIDGI YVVD GF KQ +NPR+ ++ L V PISK+ T GKC
Sbjct: 346 NISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKC 405
Query: 436 FRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALE 495
FR+Y+++ + + + + PEI R++L+S VL LK L I D++ F ++DPP ++ AL+
Sbjct: 406 FRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALK 465
Query: 496 ELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFI 555
+L +D G++T LG +FPL P L +I + C + +L I AMLSV +VFI
Sbjct: 466 QLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFI 525
Query: 556 R---PSKDKKRSDDAKNIFAHPDG--DHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYR 610
R P K+ + + A G D TL ++ KS A WC+ +++++R
Sbjct: 526 RPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPA----SWCQKHWIHWR 581
Query: 611 SLSAADNIRNQLERLM--VRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKG 668
L +A + QL L+ ++ + ++ P++ + +R+ L AG+F VA +RS G+
Sbjct: 582 CLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKH-EVLRRCLCAGYFKNVA-RRSVGRT 639
Query: 669 YITVKD-NQDVLIHPSTVLGHD---AEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAY 724
+ T+ V IHPS+ L EW++++E ++T+K Y R V +R EW+ +L P
Sbjct: 640 FCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKL 699
Query: 725 YDLD 728
++ +
Sbjct: 700 HEFN 703
>SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 912
Score = 414 bits (1064), Expect = e-115
Identities = 215/435 (49%), Positives = 309/435 (70%), Gaps = 12/435 (2%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R LP A R++ L + ++NQ+++ VGETGSGKTTQ+ QF L+++ H +N + CTQPR
Sbjct: 489 REFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQF-LYEDGYH-RNGMIGCTQPR 546
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAAMSVA+RV+EEM V+LG VGYSIRFE+ T T++KYMTDG+LLRE++ ++L++Y
Sbjct: 547 RVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKY 606
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S II+DEAHER+L TDILMGLLK+V+ RR D+K+++ SAT++++KF +F AP +PG
Sbjct: 607 SVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPG 666
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQ 328
RT+PV+I + DY+++A+R VLQIH ++ GDIL+F+TG+++IE I+ D+
Sbjct: 667 RTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIA---DR 723
Query: 329 LIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAETSLTIDGI 387
L + +S+ P+Y +P Q +IF+ A PG RKV+V+TNIAETSLT+ GI
Sbjct: 724 LNQLHDAPRLSILPIYSQMPADLQAKIFDSA------EPGVRKVVVATNIAETSLTVHGI 777
Query: 388 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKE 447
YVVD G+ K K+YN ++ +++L V+PIS+A+ T PG +RLYTE A+ +E
Sbjct: 778 SYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIRE 837
Query: 448 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDG 507
+ E + PEI R+NLS+TVL LK LG++++ FDFMD P +T+M +L EL L LD+ G
Sbjct: 838 MFETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFG 897
Query: 508 NLTPLGRLASQFPLD 522
LT LG+ S FP+D
Sbjct: 898 KLTTLGKKMSLFPMD 912
>SPAC145.03 [A] KOG0922 DEAH-box RNA helicase
Length = 647
Score = 407 bits (1047), Expect = e-113
Identities = 254/654 (38%), Positives = 384/654 (57%), Gaps = 24/654 (3%)
Query: 71 NPFTGGSLSEKYFGILKVRRDL-PVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFV 129
N F SLS L +++ L P+ R++ L ++NQI + +G TG GKTTQIPQF
Sbjct: 3 NEFISQSLSTLTNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQF- 61
Query: 130 LFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKY 189
L++ QN + CTQPRR+ A SV++RV+ E++ G GYSI+F++ S KT +KY
Sbjct: 62 LYEAGWASQNGIIGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKY 121
Query: 190 MTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATL 249
MTDG+LL E D L+RYS +ILDE HERTL+TD+L+G+LK+++++R D ++++ SA++
Sbjct: 122 MTDGILLNEIFFDPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASV 181
Query: 250 DAEKFQRYF--NKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILL 307
DA K ++F +K +++ G+ PVE + + +Y+DSAI TV+ I++T GDIL+
Sbjct: 182 DANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILV 241
Query: 308 FLTGEDEIEDAVRKISLEGDQLIR-EQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGR 366
FL+G EIE ++KI D LI + C + PL+ L +Q R+F ++G
Sbjct: 242 FLSGRKEIEYCIKKIE---DSLIHASEDCQTLVPLPLHAGLTVDEQMRVF----NIYDG- 293
Query: 367 PGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXX 426
RKVI STNIAETS+TIDGIVYVVD GF+KQ++YNP R L+ PISK+S
Sbjct: 294 DFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGR 353
Query: 427 XXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPA 486
T GK FRLYTE+A+ + E+ +IL ++S VL LK LG+ +++ F F P
Sbjct: 354 AGRTMRGKVFRLYTEKAYSL-MKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPP 412
Query: 487 PETMMRALEELNFLACLDDDGNLT-PLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIV 545
+M ALE+L L LD+ GNLT PLG S LD ++ L+ S +F C+ E+L+I
Sbjct: 413 TVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIA 472
Query: 546 AMLSVPSVFIRP-SKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRD 604
++L+ VF P S K + A + F +GD +T LNV+ +F ++ +WCR
Sbjct: 473 SILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKK----DLQWCRK 528
Query: 605 NFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRS 664
N+LNY++L A +IR L R + ++++ T I K L GF VA ++
Sbjct: 529 NYLNYQTLRQALDIRTHLVRFLNKFSIP--TAQRLPSSDCSKILKCLLDGFVRNVAHLQN 586
Query: 665 GGKGYITVKDNQDVLIHPSTVLGHDAEWVVYNEFVLT-SKNYIRTVTSVRPEWL 717
G Y T+ Q L S + W++Y+ V + ++ +++ ++ + WL
Sbjct: 587 DG-SYKTIGGKQVWLDSSSVLHEKKTPWIMYSSAVESETQIFVKNISKIESFWL 639
>ECU11g0860 [A] KOG0922 DEAH-box RNA helicase
Length = 664
Score = 393 bits (1009), Expect = e-109
Identities = 236/636 (37%), Positives = 372/636 (58%), Gaps = 48/636 (7%)
Query: 91 DLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRV 150
++ V + DE +++Q+++ G+TG GKTT+IP+++L + ++ C+QPRR+
Sbjct: 56 EVSVEDKMDEIFAKLEKSQVLLIQGDTGCGKTTKIPKYLL------RKYGKIVCSQPRRI 109
Query: 151 AAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSC 210
AA+S+A++VA +M K+GE+VGYSIRF++ +S +T LKY+TDG+LLRE D LK+Y
Sbjct: 110 AAVSIAKKVAVDMKGKIGEDVGYSIRFDDMSSGRTRLKYVTDGVLLREIKNDKHLKKYDV 169
Query: 211 IILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRT 270
+I+DEAHER++ DIL+G LK ++ R DL+++IMSATL++EKF +F + + + R
Sbjct: 170 VIIDEAHERSVNIDILLGYLKSILSERKDLRVVIMSATLNSEKFASFF-RCQTVEIRHRM 228
Query: 271 HPVEIYYTPEFQ-RDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQL 329
P+EI++ + DY+D A++TV+QIH EE GDIL+FLTG DEI G ++
Sbjct: 229 FPLEIFFLKKSDVADYVDEAMKTVVQIHRGEESGDILVFLTGRDEIN--------SGREI 280
Query: 330 IREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVY 389
+ E V +Y +L P +Q+ +F + RK++++TNIAETS+TI+G+ Y
Sbjct: 281 LMEVLGNDAEVCCIYSTLSPEEQEAVFRKTKK-------RKIVLATNIAETSITIEGVRY 333
Query: 390 VVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELI 449
VVD G +KQ Y+ ++ L V ISKA T+ GK FR+Y++E ++K +
Sbjct: 334 VVDSGRAKQMRYSASFGMDILEVVWISKAQAKQRAGRAGRTQAGKVFRMYSKEEYQK-MD 392
Query: 450 EQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNL 509
+ + PEI NL VLELK +G+DD+V+F+ +D P + +ALE L +L + DG +
Sbjct: 393 DNTTPEIFCCNLGKIVLELKSIGVDDIVNFNLIDKPDASNVKKALEMLYYLRAIGGDGKI 452
Query: 510 TPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFI---RPSKDKKRSDD 566
T +G AS PLDP LAV LI S E C E++ I AMLSV +V++ R S+ K
Sbjct: 453 TSIGVKASTIPLDPELAVSLIVSSELGCLEDVSIIAAMLSVGNVWLDVPRYSQSYKAFLG 512
Query: 567 AKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLM 626
A+ GDH LL +Y ++ + +W FLN +++ I+ QL
Sbjct: 513 ARAAHFDKRGDHFLLLKIYRRWEKTGFKISHLKRW----FLNVKTMLQTVKIKKQL---- 564
Query: 627 VRYNLELNTTDYDSPRYFD--NIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPST 684
+ + SP D I +L AG+FM VAK G+ Y+++ ++ IH ++
Sbjct: 565 --------CSMFRSPCKSDESGILPSLCAGYFMNVAK--LVGESYVSIFNDTPCFIHYTS 614
Query: 685 VLG-HDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIE 719
+ +A++++Y+ T K Y R V E L++
Sbjct: 615 CMSRQNAKYILYHTLCRTGKEYARYCVGVTLEDLLK 650
>7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 703
Score = 387 bits (993), Expect = e-107
Identities = 249/664 (37%), Positives = 375/664 (55%), Gaps = 41/664 (6%)
Query: 78 LSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHL 137
L+ K I + ++ LPV R LK + N ++ + ETGSGKTTQIPQF+L +
Sbjct: 54 LTSKRTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLL--AGYA 111
Query: 138 QNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLR 197
+N + TQPRRVAA++VA+RVA+E++ +G+ VGY++RFE+ TS T ++++TDG+LLR
Sbjct: 112 KNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLR 171
Query: 198 EAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRR-----PDLKIIIMSATLDAE 252
E+++D L +YS IILDEAHERT+ D+L G++K R +LK+++ SAT+D +
Sbjct: 172 ESIKDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDID 231
Query: 253 KFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLT-- 310
F YFN + + GRT+PV + +T E DY+ + + + I +G+ ++ T
Sbjct: 232 HFGNYFN-CKGMYLEGRTYPVRVMHTKEEHEDYIHTVLPRRVDI-PNRARGNRVIGPTNT 289
Query: 311 ----GEDEI----EDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
GE + + KIS Q I G + V+ LY L +Q F P P +
Sbjct: 290 PACQGESIVVQPTDCTSLKISCSLFQ-IDTTGTTDLRVFTLYAQLSQGKQLECFVPTPAN 348
Query: 363 HNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
RKVI++TNIAETS+TI GI V+D GF K+K +N ++ L ISKA
Sbjct: 349 -----VRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQ 403
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 482
G C+R YT +A + + PEILR+N +S VL+L L I D +FDF+
Sbjct: 404 RAGRAGRDADGTCYRAYT-KAEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFL 461
Query: 483 DPPAPETMMRALEELNFLACL--DDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEE 540
DPP + + A + L+ L + DD +TPLGR Q+PLDP + +L+ + F C EE
Sbjct: 462 DPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEE 521
Query: 541 MLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINK 600
+L++V++LS VF+ S+ + + A F GDHLTLLNV++ F E +
Sbjct: 522 ILSLVSVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPK----M 577
Query: 601 WCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVA 660
WC DN+LN RSL+ A N+R QL + +L LN++D + ++K + GFF +A
Sbjct: 578 WCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSSD-----DIEMLKKCILNGFFENIA 632
Query: 661 KKRSGGKGYITVKDNQDVLIHPSTVL--GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLI 718
+ G YIT N IHPS+VL + ++++ E V T + ++R VT + EW+
Sbjct: 633 VLQRDG-FYITASGNIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIK 691
Query: 719 ELAP 722
E+ P
Sbjct: 692 EVVP 695
>ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 784
Score = 385 bits (989), Expect = e-106
Identities = 232/647 (35%), Positives = 370/647 (56%), Gaps = 44/647 (6%)
Query: 87 KVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQ 146
+V + LP+ + RD+ ++ +++++V VGETGSGK+TQ+P++ L+ E + + CTQ
Sbjct: 101 EVSQRLPIESFRDDLMEFVGKHRVIVLVGETGSGKSTQVPKY-LYQE-GYGDKGIIGCTQ 158
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLK 206
PRR AA+S+A + EM G VGYSIRF++ T+ T ++YMT+G+LL+E + D L+
Sbjct: 159 PRRAAAISLASTLKREM----GCAVGYSIRFDSTTTQDTKIRYMTEGILLQELLADKMLR 214
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAV 266
RYS +ILDEAHERT DI MGLLK + R DL+IIIMSAT++A+K YF P +
Sbjct: 215 RYSVVILDEAHERTTNLDISMGLLKLALKERDDLRIIIMSATIEAQKLCNYFG-CPAFNI 273
Query: 267 PGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEG 326
GR++PVE Y DY++ ++ +L IH +GDIL+F+TG D++E V ++
Sbjct: 274 EGRSYPVETRYLSVNVDDYVEWTVKKILYIHENCGEGDILVFVTGRDDVEGVVGIVN--- 330
Query: 327 DQLIREQGCGP-------ISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAE 379
IR + G + V P Y LP Q R+F+ + RK IVSTN+AE
Sbjct: 331 -HCIRNKCFGEGSEGGRGLKVLPFYSQLPEEMQNRVFQAEKDV------RKCIVSTNVAE 383
Query: 380 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLY 439
TSLTI I YV+D G K VY+ ESL+ PIS+A+ TRPG C+R+Y
Sbjct: 384 TSLTIPNIGYVIDTGLQKISVYSYDTG-ESLVTVPISRANADQRTGRAGRTRPGVCYRMY 442
Query: 440 TEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNF 499
T + ++ +++ PEI R+N+ + VL L K G+ D++ FDF+D P+ E + AL L+
Sbjct: 443 TADTYENDMLPSPVPEIQRTNIHNVVLLLLKHGVHDILGFDFVDRPSEELIQGALLGLHR 502
Query: 500 LACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSK 559
L + G LT +G+ S+ LDP LA M++G+ + E+ +I +MLSV VF
Sbjct: 503 LGAVCSRGLLTKVGKEMSELRLDPPLARMVLGAAGYGAVNEIASIASMLSVHEVF----- 557
Query: 560 DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIR 619
R D + H D LTLLN+++AF + ++WC ++ +L A +
Sbjct: 558 --HRDFDKSSPLCHQGCDFLTLLNIFNAF----IRQKNRSEWCNKMKVSEHALKRATETK 611
Query: 620 NQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVL 679
+ + + +++T R D I++ + + VA++R GKGY+ + + + +
Sbjct: 612 RAVLMSLREMGVPISST-----RSLDKIQRCIISSVHYNVARRR--GKGYVCLSNFRACM 664
Query: 680 IHPSTVLGHD-AEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
+HPS+VL ++++++ + + T Y+ +++ P+ ++E A YY
Sbjct: 665 VHPSSVLADSYSQYIIFYKHLSTRAEYMYCCSNISPQVILEEAGCYY 711
>7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 555
Score = 377 bits (967), Expect = e-104
Identities = 195/530 (36%), Positives = 318/530 (59%), Gaps = 23/530 (4%)
Query: 232 QVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIR 291
Q++ RR DLK+I+ SAT+D+ KF +F P +PGRT PV++ ++ DY++SA++
Sbjct: 5 QIVARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVK 64
Query: 292 TVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQ 351
LQ+H T +GD+L+F+ G+++IE + ++L +S+ P+Y LP
Sbjct: 65 QALQVHLTPNEGDMLIFMPGQEDIEVTCEVLE---ERLAEIDNAPALSILPIYSQLPSDL 121
Query: 352 QQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLL 411
Q +IF+ + + RK +V+TNIAETSLT+DGI+YV+D G+ K KVYNPRI +++L
Sbjct: 122 QAKIFQKSSDGL-----RKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQ 176
Query: 412 VSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKL 471
+ PIS+A+ T PG+ +RLYT+ +K EL+ + PEI R+NL++TVL LK L
Sbjct: 177 IYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSL 236
Query: 472 GIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIG 531
G+ DL+ F FMDPP + ++ +L +L L LD G LT LGR ++FPLDP MLI
Sbjct: 237 GVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIV 296
Query: 532 SPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSD 591
+ CS E+L IV+MLSVPS+F RP + +D + F P+ DHLT LNVY ++ +
Sbjct: 297 ACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQN 356
Query: 592 EAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKAL 651
+ WC ++F++ +++ +R QL+ +M + NL + + D +D +RK +
Sbjct: 357 NY----SSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGID----WDIVRKCI 408
Query: 652 AAGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTV---LGHDAEWVVYNEFVLTSKNYIRT 708
+ +F Q A+ + G+ Y+ ++ +HP++ LG ++VVY+E ++T+K Y++
Sbjct: 409 CSAYFYQAARLKGIGE-YVNLRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQC 467
Query: 709 VTSVRPEWLIELAPAYYDLDHFQKG---DIKLSLERVKQKLDKMVELQQE 755
T+V WL EL P ++ + + K + E +K+ ++M++ Q E
Sbjct: 468 ATAVDGYWLAELGPMFFSVKESGRSGREKKKQAAEHLKEMEEQMLKAQHE 517
>SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 357 bits (915), Expect = 5e-98
Identities = 188/334 (56%), Positives = 245/334 (73%), Gaps = 14/334 (4%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R+ LPV+ +D+ LK E Q+++ V ETGSGKTTQ+PQF L + N ++ CTQPR
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQF-LHEAGYTKGNKKICCTQPR 473
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAAMSVA RVA+EMDV+LG+EVGYSIRFEN TS KT++KY+TDGMLLRE + + DL Y
Sbjct: 474 RVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASY 533
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S II+DEAHERTL TDIL GL+K + RPDLK++I SAT+DAEKF YF++AP+ VPG
Sbjct: 534 SVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPG 593
Query: 269 RTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQ 328
R +PV+IYYTP+ + +Y+ +AI T+LQIH T+ GDIL+FLTG+DEIE +S +
Sbjct: 594 RRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIE----LMSENMQE 649
Query: 329 LIREQG--CGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAETSLTID 385
L R G I + P+Y +LP Q +IF+P P PG RKV+++TNIAETS+TID
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTP------PGARKVVLATNIAETSITID 703
Query: 386 GIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 419
G+ +V+D GF KQ +YNPR +ESL+ P S+AS
Sbjct: 704 GVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRAS 737
>At5g10370_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1427
Score = 337 bits (864), Expect = 4e-92
Identities = 228/658 (34%), Positives = 349/658 (52%), Gaps = 51/658 (7%)
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVA 151
LP++A R + LK QIMV +GETGSGK+TQ+ QF+ + ++ + CTQPR++A
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASES--IVCTQPRKIA 363
Query: 152 AMSVAQRVAEEMDVKLGEE-VGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSC 210
AM++A RV EE E V + F + + + YMTD LL+ M+D L SC
Sbjct: 364 AMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISC 423
Query: 211 IILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRT 270
+I+DEAHER+L TD+L+ LLK+++ RR DL+++IMSAT DA++ +YF +L V GR
Sbjct: 424 VIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRN 483
Query: 271 HPVEIYYTPEFQRD---------YLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRK 321
PVEI Y+P + Y+ ++ ++IH TE++G IL FLT + E+E A
Sbjct: 484 FPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC-- 541
Query: 322 ISLEGDQLIREQGCGPISV-YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAET 380
E+ P ++ PL+G L +Q R+F ++H GR RKVI +TNIAET
Sbjct: 542 ----------ERFITPSAIALPLHGKLSFEEQFRVF----QNHPGR--RKVIFATNIAET 585
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
SLTI G+ YV+D G K+ Y PR + L V +S++S T PG+C+RLY+
Sbjct: 586 SLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYS 645
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
+ F + Q PEI R +L +L + LG++++ F+F+D P PE + A++ L L
Sbjct: 646 KNDFDSMNLNQE-PEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQL 704
Query: 501 -ACLDDDG--NLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVA-MLSVPSVFIR 556
A ++ +G LT G + L+P L +++G +E + + A M + S+F R
Sbjct: 705 GAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCR 764
Query: 557 PSK--DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSA 614
DK ++D K F + +GD TLL+VY + S NKWC +N LN +S+
Sbjct: 765 VGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERR--NKWCWENSLNAKSMRR 822
Query: 615 ADNIRNQLERLMVRYNLELNTTDY------DSPRYFDNIRKALAAGFFMQVAKKRSGGK- 667
++ +LE + + L L + Y + ++ +++ + A VA +
Sbjct: 823 CEDTVKELE-ICIERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQL 881
Query: 668 GYITVKDNQDVLIHPSTVL---GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAP 722
GY Q V +HPS L G WVV+ E + Y+ VT+ E L L P
Sbjct: 882 GYEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDP 939
>SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase
Length = 1183
Score = 330 bits (846), Expect = 5e-90
Identities = 238/740 (32%), Positives = 360/740 (48%), Gaps = 114/740 (15%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFD---EMPHLQNT- 140
I + R LP+ A+ ++ N +++ G TGSGKTTQ+PQF LF+ P +N
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQF-LFEAGFSSPESENPG 449
Query: 141 QVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAM 200
+A TQPRRVAA+S+A+RV+EE+ +V Y IRF++ + T +K+MTDG+LLRE
Sbjct: 450 MIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELS 508
Query: 201 EDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPD----------LKIIIMSATLD 250
D L YS +I+DEAHER++ TDIL+GLL +++ R + LK+IIMSATL
Sbjct: 509 SDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLR 568
Query: 251 AEKFQR----YFNKAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDIL 306
F + P++ + R +PV I++ + DYL A V IH G IL
Sbjct: 569 VTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSIL 628
Query: 307 LFLTGEDEIED------------------------AVRKISLEGDQLIRE---------- 332
+FLTG+ E+E + + +S+E + L E
Sbjct: 629 VFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTS 688
Query: 333 --------QGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTI 384
P+ V PLY L Q ++F+ +PE H R IV+TN+AETS+TI
Sbjct: 689 SSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGH-----RMCIVATNVAETSITI 743
Query: 385 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAF 444
I YVVD G +K++VYN + V+ V ISKA+ T PG C+RLY+ F
Sbjct: 744 PNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVF 803
Query: 445 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLD 504
S PEILR+ + S VL++K + ID++ +F F P + ++L+ L+ L +D
Sbjct: 804 DSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAID 863
Query: 505 DDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIR------PS 558
+G LT LG S FPL P + MLI + C ++ +V+ LS+ +F+ +
Sbjct: 864 SEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDA 923
Query: 559 KDK---------------KRSDDAKNIF------------AHPDGDHLTLLNVYHAFKSD 591
DK K+ ++ KN PD L+LL+ A+
Sbjct: 924 HDKNSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYD-- 981
Query: 592 EAYEYGINKWCRDNFLNYRSLSAADNIRNQ----LERLMVRYNLELNTTDYDSPR--YFD 645
Y K+C++N+L ++L N+R Q L+R MVR E P
Sbjct: 982 --YASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIK 1039
Query: 646 NIRKALAAGFFMQVAKKRSGGKGYITV--KDNQDVLIHPSTVLGHDAEWVVYNEF--VLT 701
+R+ +A+ + QVA +GY+T+ ++ V P D+E+VVY +
Sbjct: 1040 ALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEYVVYLSLHESRS 1099
Query: 702 SKNYIRTVTSVRPEWLIELA 721
+ Y+ +T + PE L LA
Sbjct: 1100 GRVYMSPLTEISPEHLARLA 1119
>At4g01020_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1424
Score = 326 bits (836), Expect = 7e-89
Identities = 226/658 (34%), Positives = 343/658 (51%), Gaps = 51/658 (7%)
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVA 151
LP++A R + LK QIMV +GETGSGK+TQ+ QF+ + ++ + CTQPR++A
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASES--IVCTQPRKIA 360
Query: 152 AMSVAQRVAEEMDVKLGEE-VGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSC 210
AM++ RV EE E V + F + + + YMTD LL+ M+D L SC
Sbjct: 361 AMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISC 420
Query: 211 IILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRT 270
+I+DEAHER+L TD+L+ LL++++ RR DL+++IMSAT DA + +Y +L V GR
Sbjct: 421 VIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRN 480
Query: 271 HPVEIYYTPEFQRD---------YLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRK 321
PVEI Y+P + Y ++ ++IH TE++G IL FLT + E+E A
Sbjct: 481 FPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC-- 538
Query: 322 ISLEGDQLIREQGCGPISV-YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAET 380
E+ P ++ PL+G L +Q +F+ P GR RKVI +TNIAET
Sbjct: 539 ----------ERFVAPSAIALPLHGKLSFEEQFMVFQNYP----GR--RKVIFATNIAET 582
Query: 381 SLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYT 440
SLTI G+ YV+D G K+ Y PR + L V +S++S T PG+C+RLY+
Sbjct: 583 SLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYS 642
Query: 441 EEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
+ F + Q PEI R +L +L + LGID++ F+F+D P PE + A++ L L
Sbjct: 643 KTDFDSMNLNQE-PEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQL 701
Query: 501 -ACLDDDG--NLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVA-MLSVPSVFIR 556
A ++ +G LT G + L+P L +++G +E + + A M + S+F R
Sbjct: 702 GAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCR 761
Query: 557 PSK--DKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSA 614
DK ++D K F + +GD TLL+VY + S NKWC +N LN +S+
Sbjct: 762 VGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRR--NKWCWENSLNAKSMRR 819
Query: 615 ADNIRNQLERLMVRYNLELNTTDY------DSPRYFDNIRKALAAGFFMQVAKKRSGGK- 667
++ +LE + + L L + Y + ++ ++ + A VA +
Sbjct: 820 CEDTVKELE-ICIERELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQL 878
Query: 668 GYITVKDNQDVLIHPSTVL---GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAP 722
GY +Q V +HPS L G WVV+ E + Y+ VT+ E L L P
Sbjct: 879 GYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDP 936
>At2g35920 [A] KOG0920 ATP-dependent RNA helicase A
Length = 993
Score = 314 bits (804), Expect = 4e-85
Identities = 228/705 (32%), Positives = 347/705 (48%), Gaps = 99/705 (14%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ--VACTQ 146
R LP ++EFL +NQ++V GETG GKTTQ+PQF+L +E+ L+ + CTQ
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQ 284
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLK 206
PRR++A+SVA R++ E +GE VGY IR E+K S++T L + T G+LLR D +L
Sbjct: 285 PRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRL--DPNLT 342
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAV 266
S +++DE HER + D L+ +L+ ++ RRPDL++I+MSAT++A+ F YF +P + +
Sbjct: 343 NVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHI 402
Query: 267 PGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHA-------------TEEKGDILLFLTGED 313
PG T PV F D L+ + + + +E K D L L +
Sbjct: 403 PGFTFPV----AELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESESKKDDLTTLFEDI 458
Query: 314 EIE------DAVRKISLEG---------------DQLIREQGCGPISVY----------- 341
+I + + SLE + + R +G G I V+
Sbjct: 459 DINSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLL 518
Query: 342 ------------------PLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLT 383
PL+GS+P Q+ IF+ P + RK++++TNIAE+S+T
Sbjct: 519 EKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNK-----RKIVLATNIAESSIT 573
Query: 384 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEA 443
ID +VYVVD G +K+ Y+ +V LL S ISKAS + G C+RLY +
Sbjct: 574 IDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVI 633
Query: 444 FKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNFLA 501
+ + PEI+R+ L L +K L + + F + PP + A+E L +
Sbjct: 634 Y-DAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIG 692
Query: 502 CLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDK 561
L+D LTPLGR P+DP + ML+ F C LTI A L+ S F+ P K
Sbjct: 693 ALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRK 752
Query: 562 KRSDDAKNIFAHPD-GDHLTLLNVYHAFKSDEAYEYGINK-WCRDNFLNYRSLSAADNIR 619
+ +D+AK FA DH+ LL Y ++ +A G K +C NFL+ +L +++R
Sbjct: 753 EEADEAKRYFAGDSCSDHIALLKAYEGYR--DAKRGGNEKDFCWQNFLSPVTLRMMEDMR 810
Query: 620 NQLERLMVRYNLELNTTDYDSPRYFDN-------IRKALAAGFFMQVAK-KRSGGKGYIT 671
NQ L+ ++ D P ++ I L AG + V + KR G +
Sbjct: 811 NQFLDLL----SDIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFY 866
Query: 672 VKDNQDVLIHPSTVLGH----DAEWVVYNEFVLTSKNYIRTVTSV 712
K+ V IHP +V ++VY+E V T+ YIR T++
Sbjct: 867 TKELGKVDIHPGSVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNI 911
>At2g01130 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1112
Score = 304 bits (778), Expect = 4e-82
Identities = 229/761 (30%), Positives = 371/761 (48%), Gaps = 109/761 (14%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQN--TQV 142
+L R LP QR L +NQ++V GETG GKTTQIPQF+L E+ + + +
Sbjct: 212 MLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSI 271
Query: 143 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 202
CTQPRR++AMSV++RVA E +LGE VGY +R E T L + T G+LLR + D
Sbjct: 272 ICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVD 331
Query: 203 HDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAP 262
+L+ + +I+DE HER + D L+ +LK ++ RR +LK+I+MSATLDAE F YF A
Sbjct: 332 RNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAG 391
Query: 263 LLAVPGRTHPVEIYY------------TPEFQRDYLDSAIRTVLQIHATEEKGDILLFLT 310
++ +PG T+PV ++ TP Q D + +++ + F+
Sbjct: 392 VIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRKSQITFV- 450
Query: 311 GEDEIEDAVRKISLE------------------GDQLIREQGC------GP--------- 337
+EDA+R + G LI C GP
Sbjct: 451 ----VEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTG 506
Query: 338 ----------ISVYPLYG------------SLPPHQQQRIFEPAPESHNGRPGRKVIVST 375
+ ++P++G S+ +Q+ IFE E +G RK++++T
Sbjct: 507 WDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFE---EPASG--VRKIVLAT 561
Query: 376 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 435
NIAETS+TI+ + +V+D G +K+ Y+ LL S ISK S RPG+C
Sbjct: 562 NIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQC 621
Query: 436 FRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPE--TMMRA 493
+ LY + + E PEILR+ L S L++K L + + F +PE + +A
Sbjct: 622 YHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKA 680
Query: 494 LEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSV 553
+ L + LD++ +LT LGR S+ P++P L MLI C + +LT+ A LSV
Sbjct: 681 IAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDP 740
Query: 554 FIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLS 613
F+ P K ++ AK+ F+ DHL L+ Y +K E E + +C NFL+ +SL
Sbjct: 741 FLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEE-ESAVYDYCWKNFLSIQSLR 799
Query: 614 AADNIRNQLERLMVRYNL-ELNTTDYDSPRYFDNIRKA-LAAGFFMQVAKKRSGGKGYI- 670
A D++R + L+ L + N + +S N+ +A + G + + + +
Sbjct: 800 AIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSL 859
Query: 671 -TVKDNQDVLIHPSTVLGHDAE----WVVYNEFVLTSKNYIRTVTSVRPEWLI------- 718
T++D Q VL++ ++ + + W+V+NE + + ++R T+ LI
Sbjct: 860 KTMEDGQ-VLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSIS 918
Query: 719 --------ELAPAYYDLDHFQKGDIKLSLERVKQKLDKMVE 751
++ Y L+ F K D+ + +K++LD++++
Sbjct: 919 KGDTDGHLKMLGGY--LEFFMKPDVAEIYQTLKKELDELIQ 957
>7298709 [A] KOG0920 ATP-dependent RNA helicase A
Length = 674
Score = 298 bits (762), Expect = 3e-80
Identities = 198/609 (32%), Positives = 304/609 (49%), Gaps = 76/609 (12%)
Query: 86 LKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPH--LQNTQVA 143
L+ R+ LP D+ ++ +ENQ+++ VG TG GKTTQ+PQ +L D + + ++
Sbjct: 76 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII 135
Query: 144 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN-KTSNKTILKYMTDGMLLREAMED 202
CTQPRR++A+++A+ V+ E LG VGY IR E+ K + + Y T G+LL++ D
Sbjct: 136 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD 195
Query: 203 HDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAP 262
+ S +ILDE HER++ TD+LMGLLK ++ RPDLK+I+MSAT+ + F YFN P
Sbjct: 196 PLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCP 255
Query: 263 LLAVPGRTHPVEIYYTP--------EFQR------------------------------- 283
+ + G PV++ Y EFQ+
Sbjct: 256 MFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNS 315
Query: 284 -----------------DYLDSAIRTVLQIHATEEKGDILLFLTGEDEIE---DAVRKIS 323
+ +D V I E +G IL+FL G D+I + + K
Sbjct: 316 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPK 375
Query: 324 LEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLT 383
Q R+ ++V+PL+ + +QQ +F P RKVI+ST IAETS+T
Sbjct: 376 TSKGQRWRDH----MAVFPLHSLMQSGEQQAVFRRPPAGQ-----RKVIISTIIAETSVT 426
Query: 384 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEA 443
ID +VYV++ G +K Y+ ++SL ++KA+ RPG C+ L++ A
Sbjct: 427 IDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSR-A 485
Query: 444 FKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNFLA 501
+ + + PEILRS L S +L LK L IDD F ++ P PE + +E L +
Sbjct: 486 REDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIE 545
Query: 502 CLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDK 561
LD G LTPLG ++ P+DP + M++ S F C + + + A LS S F P +
Sbjct: 546 ALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKE 605
Query: 562 KRSDDAKNIFA-HPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRN 620
R D+ K A + DHL + N A++ D Y + +C NFL+ +L + ++N
Sbjct: 606 SRVDEIKRRMARNMRSDHLMVHNTIIAYR-DSRYSHAERDFCYKNFLSSMTLQQLERMKN 664
Query: 621 QLERLMVRY 629
Q L+ Y
Sbjct: 665 QFSELLYNY 673
>Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 599
Score = 297 bits (760), Expect = 5e-80
Identities = 190/573 (33%), Positives = 300/573 (52%), Gaps = 26/573 (4%)
Query: 163 MDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLA 222
MD+ LG EVG SI E+ T T+L++ D +LL+E + ++LDEA ER++A
Sbjct: 1 MDLTLGHEVGSSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVA 60
Query: 223 TDILMGLLKQV-IDRRP-DLKIIIMSATLDAEKFQRYFNKAPLLAVPGRT--HPVEIYYT 278
+D L GLL+ +++ P DL++++++ K + ++ P++ +P P IY+
Sbjct: 61 SDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWD 120
Query: 279 PEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPI 338
D +++A + VL++ E GD+L+FL E+EI +S E + L+ QG P
Sbjct: 121 T-IPPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLL-QGLPP- 177
Query: 339 SVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQ 398
V PL+ Q ++E RKV+V+ +A+ S ++ I +V+D G +
Sbjct: 178 RVLPLHPDCG-RAVQAVYEDMD-------ARKVVVTHWLADFSFSLPSIQHVIDSGLELR 229
Query: 399 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILR 458
VYNPRIR E ++ PISK PG C LY + + E P +
Sbjct: 230 SVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCE 289
Query: 459 SNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQ 518
NLSS VL LK+ I + F+D PAPE +M+ALE+L++LA LDDDG+L+ LG + S+
Sbjct: 290 ENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSE 349
Query: 519 FPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDH 578
FPL P LA L+ S EF C +EMLT+ AML+ F RP + + + H DGDH
Sbjct: 350 FPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEA-ALRRALEHTDGDH 408
Query: 579 LTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDY 638
+L+ VY AF A E WC+ LN+ +L A +R +L LM R L L+ +
Sbjct: 409 SSLIQVYEAFIQSGADE----AWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAF 464
Query: 639 DSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLI------HPSTVLGHDAEW 692
S + +++KAL + +F++VA+ G Y+ + + W
Sbjct: 465 GSEQNRRDLQKALVSEYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPW 524
Query: 693 VVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYY 725
V+Y+ F ++ N + V+ ++P+ L+ELAP Y+
Sbjct: 525 VLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 557
>CE27603 [A] KOG0922 DEAH-box RNA helicase
Length = 974
Score = 290 bits (742), Expect = 6e-78
Identities = 188/569 (33%), Positives = 310/569 (54%), Gaps = 43/569 (7%)
Query: 80 EKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQN 139
+K + K++++LP+ + E +++ + NQ+++ G+TG GK+TQ+PQ++L
Sbjct: 80 QKLQKLRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLKAGF----- 134
Query: 140 TQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREA 199
T VACTQPRR+A ++A+RVA E + G EV + IRFE S KT L ++T+G+LLR+
Sbjct: 135 TGVACTQPRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKLLFLTEGLLLRQM 194
Query: 200 MEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFN 259
+D L++Y+ IILDE HER L +D+L+GLL+ + +R DLK+I+MSAT++ + F+ YF
Sbjct: 195 EKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFE 254
Query: 260 KAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQI---------------HATEEKGD 304
AP++ VPGR P+++ + P + ++D + + +I + ++GD
Sbjct: 255 GAPVVQVPGRLFPIDVRWHP--IKQFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRGD 312
Query: 305 ILLFLTGEDEIEDAVRKISLEGDQL--IREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
L+FL G V +IS+ + L E G I + L+ +L +Q ++F+ AP
Sbjct: 313 ALIFLNG-------VAEISMVAEHLKNYAELTNGWI-ILMLHSTLSVEEQDKVFDQAPVG 364
Query: 363 HNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
RK I+STN+AETS+TIDGI +V+D G + P + L +SKAS
Sbjct: 365 I-----RKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQ 419
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGID-DLVHFDF 481
T PG C+RLY++E F+K + + + EI R +L L++ L + D F F
Sbjct: 420 RKGRAGRTGPGICYRLYSQEQFEK-MDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPF 478
Query: 482 MDPPAPETMMRALEELNFLACLDDDG----NLTPLGRLASQFPLDPMLAVMLIGSPEFSC 537
++ P+ + + LE L F L D LT LG + S+ P++ +A ML+
Sbjct: 479 IEKPSEDVLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDE 538
Query: 538 SEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYG 597
E MLT+ A LSV S F S + + + P GD TL++++ + +A+E
Sbjct: 539 LEVMLTVAAGLSVQSPFTNRSYRELEIVERRASLTSPLGDPFTLISIFREWVLQKAFEGT 598
Query: 598 INKWCRDNFLNYRSLSAADNIRNQLERLM 626
+W +N ++ L +R Q +++
Sbjct: 599 ARRWTMENGIDEHRLYEISKLRAQYRQIL 627
>At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 301
Score = 290 bits (742), Expect = 6e-78
Identities = 150/290 (51%), Positives = 205/290 (69%), Gaps = 8/290 (2%)
Query: 459 SNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQ 518
+NL++TVL LK L + +LV FD +D PAP+T+ RAL++L L LDDD NLT G + S+
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 519 FPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRP-SKDKKRSDDAKNIFAHPDGD 577
FPLDP +A MLI SP+F+CS E+L+I AMLSVP+ FIRP + +K +D+AK+ FAH DGD
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGD 121
Query: 578 HLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTD 637
HLTLLN++HAF + WC F+NYR++ +A ++R QL R+M+R+ ++L + D
Sbjct: 122 HLTLLNLFHAFLQNNQDP----NWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPD 177
Query: 638 YDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITV--KDNQDVLIHPSTVLGHDAEWVVY 695
++S Y+ NIRKAL AG+FMQVA G Y+T KD+Q V +HPS L H EWVVY
Sbjct: 178 FNSRDYYVNIRKALLAGYFMQVAHLERTGH-YLTFRDKDDQVVHLHPSNCLDHKPEWVVY 236
Query: 696 NEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLERVKQK 745
NE+V TS+N+IRTVT +R EWL+++AP YY L +F + K LER +K
Sbjct: 237 NEYVFTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAKRVLERHYKK 286
>Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1008
Score = 288 bits (738), Expect = 2e-77
Identities = 216/735 (29%), Positives = 348/735 (46%), Gaps = 116/735 (15%)
Query: 81 KYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNT 140
+Y + R LP + + E + + +Q+ V GETG GKTTQ+ QF+L + + + +
Sbjct: 196 RYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 255
Query: 141 --QVACTQPRRVAAMSVAQRVAEEMDVKLGE--EVGYSIRFENKTSNKT-ILKYMTDGML 195
++ CTQPRR++A+SVA+RVA E G GY IR +++ K + Y T G++
Sbjct: 256 ACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGII 315
Query: 196 LREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQ 255
L+ D L S I+LDE HER L +D+LM ++K +++ R DLK+I+MSATL+AEKF
Sbjct: 316 LQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFS 375
Query: 256 RYFNKAPLLAVPGRTHPV----------EIYYTPE-------FQRDY------------- 285
YF P++ +PG T PV +I Y PE F+R +
Sbjct: 376 EYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRCQFKRGFMQGHVNRQEKEEK 435
Query: 286 ------------------------------------LDSAIRTVLQIHATEEKGDILLFL 309
L+ + + I EE G IL+FL
Sbjct: 436 EAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFL 495
Query: 310 TGEDEIEDA----VRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNG 365
G D I + ++ + D+ + + PL+ +P Q ++F+ P
Sbjct: 496 PGWDNISTLHDLLMSQVMFKSDKFL---------IIPLHSLMPTVNQTQVFKRTP----- 541
Query: 366 RPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXX 424
PG RK++++TNIAETS+TID +VYV+D G K+ ++ + + ++ +SKA+
Sbjct: 542 -PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRK 600
Query: 425 XXXXXTRPGKCFRLYTEEAFKKELIEQ-SYPEILRSNLSSTVLELKKLGIDDLVHF--DF 481
+PG C+ LY + L++ PEILR+ L L++K L + + +F
Sbjct: 601 GRAGRVQPGHCYHLY--NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRL 658
Query: 482 MDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEM 541
MDPP+ E ++ ++ L L LD LTPLG ++ P++P + M++ F C + +
Sbjct: 659 MDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV 718
Query: 542 LTIVAMLSVPSVFIRP-SKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINK 600
LTI A LS F+ P K+K K + DHLT++N + ++ + K
Sbjct: 719 LTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEK 778
Query: 601 -WCRDNFLNYRSLSAADNIRNQLER--LMVRYNLELNTTDYDSPRYFDN---IRKALAAG 654
+C + FL+ +L N++ Q L + N D +S DN I+ + AG
Sbjct: 779 DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAG 838
Query: 655 FFMQVA-------KKRSGGKGYITVKDNQDVLIHPSTVLGHDAE----WVVYNEFVLTSK 703
+ +VA KKR K Y K + V +HP +V + W++Y+ + TS
Sbjct: 839 LYPKVAKIRLNLGKKRKMVKVY--TKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSS 896
Query: 704 NYIRTVTSVRPEWLI 718
Y+ T V P L+
Sbjct: 897 IYLYDCTEVSPYCLL 911
>7293584_2 [A] KOG0922 DEAH-box RNA helicase
Length = 838
Score = 286 bits (732), Expect = 8e-77
Identities = 186/575 (32%), Positives = 301/575 (52%), Gaps = 47/575 (8%)
Query: 79 SEKYFGILKVR---RDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMP 135
+EK+ I K+R R+LP+ R + + +++++ G+TG GK+TQ+PQ+ L+D
Sbjct: 1 TEKFQRIRKLRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQY-LYD--- 56
Query: 136 HLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGML 195
+ACTQPRR+A +S+ +RVA E+ G V + IRFE + T + ++T+G+L
Sbjct: 57 -FGYRSIACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLL 115
Query: 196 LREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQ 255
LR+ +L +Y +ILDE HER L D L+G+ K ++ RP LK+I+MSAT++ E F
Sbjct: 116 LRQLAVAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFH 175
Query: 256 RYFNK--APLLAVPGRTHPVEIYYTP--------------EFQRDYLDSA-----IRTVL 294
YF + A L+ VPGR P+++ Y P QR+ +D A + +
Sbjct: 176 GYFGEEGARLVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLID 235
Query: 295 QIHATEEKGDILLFLTGEDEIE---DAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQ 351
Q + T E+GD+L+F++G +EIE +AV + + E + V PL+
Sbjct: 236 QQYPTSERGDVLIFVSGVNEIESVVEAVHEYATEQTHWL---------VLPLHSGQAIAD 286
Query: 352 QQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLL 411
Q ++F+ APE RK IVSTNIAETSLT+DG+ +VVD G K+ ++ + + L
Sbjct: 287 QSKVFDYAPEGM-----RKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLK 341
Query: 412 VSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKL 471
+SK+S T PG CFRLYT E + PEI R L + +L++ +
Sbjct: 342 EFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSM 400
Query: 472 GIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIG 531
G+ D+ F F++ P E + + + L L + +TPLGR + P++ + ML+
Sbjct: 401 GLPDVRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLM 460
Query: 532 SPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSD 591
F E++LT+ AMLSV + + +R + GD TL+ +Y+ +
Sbjct: 461 GSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQL 520
Query: 592 EAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLM 626
+ G +WCR + + +R Q +R++
Sbjct: 521 KMRRDGTRQWCRRLGIEEQRFYEVTKLRQQFQRIL 555
>Hs22066120 [A] KOG0922 DEAH-box RNA helicase
Length = 516
Score = 283 bits (724), Expect = 7e-76
Identities = 173/459 (37%), Positives = 259/459 (55%), Gaps = 32/459 (6%)
Query: 190 MTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVI-----DRRPDLKIII 244
MTDG LL+ + D L ++ IILDEAHERTL TDIL GLLK++ +R+ LK+++
Sbjct: 1 MTDGCLLKHILGDPSLTKFRVIILDEAHERTLTTDILFGLLKKLFQEKSANRKEHLKVVV 60
Query: 245 MSATLDAEKFQRYFNKAPLLAVPGRTHPV-EIYYTPEFQRD-----YLDSAIRTVLQIHA 298
MSAT++ K +F P+ +PGR +PV E + RD Y+ + ++ + IH
Sbjct: 61 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 120
Query: 299 TEEKGDILLFLTGEDEIEDAVRKI-----SLEGDQLIREQGCGPISVYPLYGSLPPHQQQ 353
E GDIL+FLTG+ EIE + + S++ D +++ + + P YGS+ QQ+
Sbjct: 121 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTILDGLLILPCYGSMTTDQQR 180
Query: 354 RIFEPAPESHNGRPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLV 412
RIF P P PG RK ++STNI+ TSLTIDG YVVD GF KQ +NPR+ ++ L V
Sbjct: 181 RIFLPPP------PGIRKCVISTNISATSLTIDGTRYVVDGGFVKQLNHNPRLGLDILEV 234
Query: 413 SPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLG 472
PISK+ T GKCFR+Y+++ + + + + PEI R++L+S VL LK L
Sbjct: 235 VPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLA 294
Query: 473 IDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGS 532
I D++ F ++DPP ++ AL++L +D G++T LG +FPL P L +I +
Sbjct: 295 IHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 354
Query: 533 PEFSCSEEMLTIVAMLSVPSVFIR---PSKDKKRSDDAKNIFAHPDG--DHLTLLNVYHA 587
C + +L I AMLSV +VFIR P K+ + + A G D TL ++
Sbjct: 355 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQ 414
Query: 588 FKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLM 626
KS A WC+ +++++R L +A + QL L+
Sbjct: 415 CKSSGAPA----SWCQKHWIHWRCLFSAFRVEAQLRELI 449
>SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A
Length = 1327
Score = 273 bits (699), Expect = 6e-73
Identities = 219/721 (30%), Positives = 340/721 (46%), Gaps = 96/721 (13%)
Query: 86 LKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNT--QVA 143
++ R LP R + + Q +Q++V GETGSGK+TQ+ QF+L + + V
Sbjct: 571 VREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVV 630
Query: 144 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 203
CTQPRR++A+S+A+RVA E D +G+EVGYS+ E S +T+L++ T G+LLR ++ H
Sbjct: 631 CTQPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRR-IQQH 689
Query: 204 DL---KRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNK 260
L SC+++DE HER++ DIL+ LLK VI R P+LK+I+MSAT++++ F+ YF
Sbjct: 690 GLGFLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGN 749
Query: 261 APLLAVPGRTHPVEIYYTPEF-----------------QRDY-----LDSAIRTVLQIHA 298
A L + GRT P++ YY +F +++Y L S + + +
Sbjct: 750 AGHLHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAEL 809
Query: 299 TEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEP 358
G IL+FL G I +R+ I+ + V PL+ SL +Q+R F+
Sbjct: 810 GSSSGSILVFLPGVSNIARCIRE--------IKSKDGSKFEVLPLHASLNTSEQRRCFKT 861
Query: 359 APESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKA 418
+ RK+I +TNIAETS+TID +V V+D G KQ Y+ + + + S+A
Sbjct: 862 YTK-------RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRA 914
Query: 419 SXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKL------- 471
+ + G C++LYT +K ++ Q+ PE+LR+ LS L + L
Sbjct: 915 ACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSA 974
Query: 472 ------GIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPML 525
G +DPP T+ AL++L + L +LT LG P+D L
Sbjct: 975 GNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKL 1034
Query: 526 AVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVY 585
+L+ F E LTI A+LS S F+ D+ R +K + GD L VY
Sbjct: 1035 GKLLVFGSIFGYLEPALTITAILSTKSPFL--GDDEAREIRSKQ--SQGWGDVLADARVY 1090
Query: 586 HAFKSDEAYEYGINK---WCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTT------ 636
H + + G+ K WC + L+Y +L RN+L LEL T
Sbjct: 1091 HNW-LEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSE--AAQLLELTTKKLTGNF 1147
Query: 637 DYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITV------------------KDNQDV 678
D+ S + +AA V K K ++ ++NQ +
Sbjct: 1148 DWYSTENLTVLSTLIAAALSPNVVKCVYPDKKFVASFSGSLEMEQEARLTKFYDQNNQRL 1207
Query: 679 LIHPSTVL------GHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQK 732
IHPS+ + +V Y + V T+K ++R T + +I L +D K
Sbjct: 1208 FIHPSSTMFVNSPNASRCTFVAYEQKVETTKPFLRNCTPINTYGMILLGANDILIDPLGK 1267
Query: 733 G 733
G
Sbjct: 1268 G 1268
>ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 797
Score = 272 bits (695), Expect = 2e-72
Identities = 198/704 (28%), Positives = 337/704 (47%), Gaps = 78/704 (11%)
Query: 47 GEFSGMQRHHTTAADAERLENGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQ 106
G G + A E + + +L + I + R+ LP++ ++ E + +
Sbjct: 137 GIVQGFAQEDKCAWSVEDERKDAPREYETEALENRRKDIEEYRKTLPIYYEKAEIVYAVR 196
Query: 107 ENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEMDVK 166
+ ++ G G GKTTQIPQF+ E + TQPRR++A S++ R+ EEM+
Sbjct: 197 TSAVVFVTGAPGCGKTTQIPQFLY--EGGLAAGKMIGVTQPRRISATSISSRINEEMNEN 254
Query: 167 LGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDIL 226
L GY I++E+ +++T +K MTDG+L++E +D L RYS II+DE HER D+L
Sbjct: 255 L---CGYKIKYESTVTSETRIKVMTDGVLIKEIQDDFLLSRYSVIIVDEVHERNTNIDLL 311
Query: 227 MGLLKQVID----RRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQ 282
+ ++ +++ R DLK+++MSAT DA++F+ + + P + V +Y + +
Sbjct: 312 ISIIPRIMKVRRARGDDLKLVLMSATGDADEFKAFLGDVTVFVCPEKRFRVSTFYEEKTE 371
Query: 283 RDYLDSAIRTVLQIHAT------------------------EEKGDILLFLTGEDEIEDA 318
DYLD+A V +I + ++ IL+FLT + EI
Sbjct: 372 ADYLDAAYERVKKIVLSSSGARKRRRVREGRSDIIGSEVLNDKSASILVFLTSKQEIYQL 431
Query: 319 VRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIA 378
++ G I+V PL+ SL +Q+ +F+ P RKVI++TNIA
Sbjct: 432 KSRLEDSGMD---------ITVLPLHSSLSKSEQKLVFDKMPN-------RKVILATNIA 475
Query: 379 ETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRL 438
ETS+TI +V+VVD G K ++ + V + I+K++ T PG C+RL
Sbjct: 476 ETSITIPDVVFVVDSGKVKNRLVDSE-GVTKYSIDFITKSNAIQRTGRAGRTGPGVCYRL 534
Query: 439 YTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELN 498
Y+ EA+++ E P+ILR L VL L LGI D+ F F+ P ++ A+ L
Sbjct: 535 YSGEAYER-FYESMKPQILREPLDGVVLNLLSLGIRDIYSFPFLSKPGTTSINNAIARLQ 593
Query: 499 FLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPS 558
L +D D LT G+ S++P++P LA +L S E++ +V+++S
Sbjct: 594 GLGAVDKDLKLTGTGKKMSRYPVEPRLARLLCAQGLDDISTEIIVLVSLIS-------SG 646
Query: 559 KDKKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNI 618
+ +R+ K F D L L++Y F ++ + +C++ ++Y + A +
Sbjct: 647 AEVRRNHSNKRYFEGSKSDFLVQLSIYSDFLKSKSRK----AFCKEMGMSYTTAVEAMKM 702
Query: 619 RNQLERLMVRYNLELNTTDYD-----SPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVK 673
L N+ T D + SP IR + GF +A SG + T
Sbjct: 703 TGYL------MNISGGTADRNVSLDLSPDTCLKIRNIIYRGFVDHLAIPSSGSHFFRT-- 754
Query: 674 DNQDVLIHPSTVLGHDAEWVVYNEFVLT-SKNYIRTVTSVRPEW 716
++VL ++ + ++VV+ V + K Y++ +T+V W
Sbjct: 755 --EEVLASRDSISVCNGDFVVFESLVSSKGKLYMKNITAVEEAW 796
>At1g58050 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1417
Score = 265 bits (677), Expect = 2e-70
Identities = 190/592 (32%), Positives = 301/592 (50%), Gaps = 88/592 (14%)
Query: 53 QRHHTTAADAERLENGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMV 112
+R+ + AA+ L+ N +KY +LK R LP+ + + L+ +E ++V
Sbjct: 562 RRNSSMAAECSSLKQKQENK----KKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLV 617
Query: 113 FVGETGSGKTTQIPQFVLFD--EMPHLQNTQVACTQPRRVAAMSVAQRVAEEM-DVKLGE 169
GETGSGKTTQ+PQF+L D + H + CTQPR A++VAQRVA+E + G
Sbjct: 618 VCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGF 674
Query: 170 E---VGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDIL 226
+ V Y +R +N S+KT L + T G+LLR+ + D LK + II+DE HER+L D L
Sbjct: 675 DNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFL 734
Query: 227 MGLLKQVIDRR------PDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPE 280
+ +LK +I+++ P LK+I+MSAT+DA +F RYF + P++ GRTHPV Y+ +
Sbjct: 735 LIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLED 794
Query: 281 F--QRDYL-----------DSAIRTVL-QIHATEEKGDILL------FLTGEDEIE---D 317
+ YL D++I L ++ K +++L +L ED + D
Sbjct: 795 IYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYD 854
Query: 318 AVRKISL--------------------EGDQLIREQGCGPIS------------------ 339
+++ I+ EG L+ G I+
Sbjct: 855 SIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGD 914
Query: 340 -VYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQ 398
+ PL+ S+ +Q+++F P+ RKVI++TNIAETS+TI+ +VYV+D G K+
Sbjct: 915 WLLPLHSSIASTEQKKVFLRPPKGI-----RKVIIATNIAETSITIEDVVYVIDSGKHKE 969
Query: 399 KVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILR 458
YNP ++ S++ +SKA+ +PG CF LYT F+K + PE+LR
Sbjct: 970 NRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLR 1029
Query: 459 SNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLA 516
L L +K LG+ + F ++PP+ + A+ L+ + L+ D LTPLG
Sbjct: 1030 VPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHL 1089
Query: 517 SQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAK 568
++ P+D ++ ML+ F C +L+I A LS +KD++ D K
Sbjct: 1090 AKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVK 1141
>YLR419w [A] KOG0920 ATP-dependent RNA helicase A
Length = 1435
Score = 253 bits (645), Expect = 1e-66
Identities = 188/651 (28%), Positives = 313/651 (47%), Gaps = 90/651 (13%)
Query: 79 SEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLF---DEMP 135
S +Y + VR LP ++ + I +N++++ GETGSGK+TQ+ QF+L E
Sbjct: 591 SSEYKSMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKG 650
Query: 136 HLQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGML 195
T++ CTQPRR++A+ +A+RV++E V GEEVGY IR NKT T +K+MT G+L
Sbjct: 651 DFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVL 710
Query: 196 LREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQ 255
+R + + +++DE HER++ TD+++ L+K ++ R +KI++MSAT++ + F+
Sbjct: 711 VRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFK 770
Query: 256 RYFNKAPLLAVPGRTHPVEIYYTPEFQRD--------------------------YL--- 286
++F + GRT P+ Y+ + D YL
Sbjct: 771 KFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPR 830
Query: 287 -DSAIRTVLQIH----------------ATEEKGDILLFLTGEDEIEDAVRKISLEGDQL 329
DS T QI+ A + G I++FL G EI ++ + ++
Sbjct: 831 ADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNE- 889
Query: 330 IREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVY 389
V PL+ +L P Q+R+F + ++G+ RKV+VSTNIAETS+TID V
Sbjct: 890 ------ADFMVLPLHSALTPEDQKRVF----KKYHGK--RKVVVSTNIAETSITIDDCVA 937
Query: 390 VVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELI 449
+D G +K YNP+ L+ S ISKA R G ++L+++ ++ ++I
Sbjct: 938 TIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMI 997
Query: 450 EQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNFLACLDD-D 506
PEI R L S L +K +GI D+ F +D P + +A L + +D+ D
Sbjct: 998 SMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESD 1057
Query: 507 GNLTPLGRLASQFP-LDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSV-----FIRPSKD 560
+LT LG+ S P +D +LI F C++ + +V++L + + F K
Sbjct: 1058 KSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKI 1117
Query: 561 KK---RSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAAD- 616
KK + + ++FA L ++ Y K K+ RDN L+Y ++
Sbjct: 1118 KKLLCKYESRGDLFA-----VLEIVRDYFKIKDSSIK----RKYLRDNLLSYNKINEIKS 1168
Query: 617 ------NIRNQLERLMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAK 661
+I + L + Y + + + R FD +R L F+ +A+
Sbjct: 1169 STAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAILTGAFYPHIAR 1219
>SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1428
Score = 249 bits (635), Expect = 1e-65
Identities = 185/646 (28%), Positives = 319/646 (48%), Gaps = 91/646 (14%)
Query: 47 GEFSGMQRHHTTAADA--ERLENGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKI 104
G+FSG +R T + ++LE+ S F K F R LP R+ +
Sbjct: 596 GKFSGFERPPETLLNKWRQQLESESAEKF-------KVF-----RNQLPATMFRETIIDA 643
Query: 105 YQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVAAMSVAQRVAEEM- 163
+Q+++ G+TG GK+TQIP F+L + + + ++ T+PRR++A+S+A RV++E+
Sbjct: 644 VNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPRRISAISLANRVSQELG 703
Query: 164 ----DVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILDEAHER 219
+ E VGYS+R ++K + T L Y+T G LR ++++ + +I+DE HER
Sbjct: 704 GNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHER 763
Query: 220 TLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYY-- 277
++ +D+L+ + ++ + P LKIIIMSATL+AEKFQ YF + L+ +PG+T+PV +Y
Sbjct: 764 SIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPVHRFYLE 823
Query: 278 ----------------------TPEFQRDYLDSAIRTVLQIHATEE-------------- 301
+++ D D++I A E
Sbjct: 824 DILSQFGNDKSFGNAAGQDVIEEDDYETDQQDASISNKSAEDAIVEMNLIPAWYNEKAIN 883
Query: 302 -------------KGD------ILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYP 342
+GD +L+FL G EI K +E + R +Y
Sbjct: 884 YGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRV--KSLIEDMPMFRNH--RKFCIYM 939
Query: 343 LYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYN 402
L+ +L QQQ +F P+ RK+++STNIAET +TI + V+D G ++ YN
Sbjct: 940 LHSTLSSAQQQSVFNIPPKG-----CRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYN 994
Query: 403 PRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLS 462
R + L + +SKA+ + G C+ L+++ + + PEILR NL
Sbjct: 995 SRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQ 1054
Query: 463 STVLELKKLGIDDL--VHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFP 520
VL +K + D+ V +DPP+ ++RALE+L+ + L ++ LT LG+ SQ P
Sbjct: 1055 EVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLP 1114
Query: 521 LDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPD--GDH 578
+D L +L+ + C + +IVAML++ S F + ++ ++ A+ FA + D
Sbjct: 1115 VDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDL 1174
Query: 579 LTLLNVYHAFKSDEAYEYGINK--WCRDNFLNYRSLSAADNIRNQL 622
+ + Y A++ G ++ + ++ +LN +LS ++++ QL
Sbjct: 1175 VLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQL 1220
>7293336 [A] KOG0920 ATP-dependent RNA helicase A
Length = 976
Score = 249 bits (635), Expect = 1e-65
Identities = 184/676 (27%), Positives = 314/676 (46%), Gaps = 82/676 (12%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
RR LP++ QR+ L + Q +Q+++ G TGSGK+TQ+PQ++L H ++ +QPR
Sbjct: 206 RRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVVSQPR 265
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD--LK 206
R+AA+SV++R+++E G VGY+IR + S+ T+L T G LLR D K
Sbjct: 266 RIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKKSFFK 325
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAV 266
+ +I+DEAHER L TD L+ K + + P L++++MSAT+D E YF ++ V
Sbjct: 326 NTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDV 385
Query: 267 PGRTHPVEIYYT------------------------------------------PEFQRD 284
GR+ V IY+ P+ D
Sbjct: 386 EGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDIDND 445
Query: 285 YLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLY 344
+ S + +L+ + G ++++L G ++ + ++ L REQ I++ L+
Sbjct: 446 LIVSLLELLLR---QGDAGAVIVYLPGYSDMTSLLARLE---SSLPREQ----ITIILLH 495
Query: 345 GSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPR 404
+ +Q+++F P K+I+STNI +TS+TI ++YV+D G +K K Y+
Sbjct: 496 SQVDNSEQRKVFRTYPGVR-----LKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDST 550
Query: 405 IRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSST 464
I L ++ IS+A G C+RLY + + + + PEI+R L
Sbjct: 551 IDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNL-YTIPEIMRRTLDEI 609
Query: 465 VLELKKLGIDDLVHFDF----MDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFP 520
L L KL D +F +D P + +M++ L L LD+ +TPLG + ++ P
Sbjct: 610 CL-LTKLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELP 668
Query: 521 LDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFI-RPSKDKKRSDDAKNIFAHPDG--D 577
L + L+ S C + M+ I A SV F+ + KK + DG D
Sbjct: 669 LGVQIGKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSD 728
Query: 578 HLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSL----SAADNIRNQLERLMVRYNLEL 633
L ++ +Y F + + + G +C NF+ ++ SAA +R+ + R+ R++
Sbjct: 729 SLAVIKLYEEFTNLKRKDIG--DFCERNFICRNAMEMFVSAASTLRDTVYRIF-RFSEAS 785
Query: 634 NTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTVLGHD---- 689
+ IR AL AG + ++A K + + + V + S+ L
Sbjct: 786 ARLASSFNNDTNMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKKKQK 845
Query: 690 ---AEWVVYNEFVLTS 702
+EW+++ E T+
Sbjct: 846 DLASEWILFVEKTRTA 861
>Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1035
Score = 231 bits (589), Expect = 3e-60
Identities = 191/682 (28%), Positives = 325/682 (47%), Gaps = 78/682 (11%)
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ--VACTQPRR 149
LPV RD L +++ ++V G+TG GKTT+IPQ +L + + + V TQPRR
Sbjct: 275 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 334
Query: 150 VAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT-ILKYMTDGMLLREAMEDHDLKRY 208
++A+SVAQRV+ E+ L VG+ +R E+K ++ L + T G+LLR+ + L+
Sbjct: 335 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 394
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S +I+DE HER + TD L+ LLK + P L++++MSAT D E+F RYF P++ VPG
Sbjct: 395 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 454
Query: 269 RTHPVEIYYTPEF-----QRDY----------------LDSAIRTVLQIHATEEKGDILL 307
+PV+ +Y + + Y LD VL I A E G IL
Sbjct: 455 FMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILC 514
Query: 308 FLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRP 367
FL G EI+ +++ Q + P++ ++P Q+ IF+ P
Sbjct: 515 FLPGWQEIKGVQQRL-----QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVG----- 564
Query: 368 GRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXX 427
RK++++TNIAETS+TI+ IV+VVD G K++ Y+ + +V L +S+A+
Sbjct: 565 VRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRA 624
Query: 428 XXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAP 487
+ G + L+ +K ++ PEILR+ L + VL+ K+ + + +F+
Sbjct: 625 GRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVD 682
Query: 488 ETMMRALEE----LNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLT 543
++A++E L + LD LT LG+ + DP LA ++ + F C +L
Sbjct: 683 SPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLV 742
Query: 544 IVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDG-DHLTLLNVYHAFKSDEAYEYGINKWC 602
+V+ L+ F +++ D K + +H G DHL + ++ ++ ++
Sbjct: 743 VVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ---DRSS 798
Query: 603 RDNFLNYRSLSAADNIR-----------NQLERLMVRYNLELNTTDYDSPRYFDN---IR 648
R+N+L +L A ++R N E +V + Y + ++
Sbjct: 799 RENYLE-ENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK 857
Query: 649 KALAAGFFMQVAKKRSG-----GK---GYITVKDNQ-DVLIHPSTVLGH----DAEWVVY 695
L AG + + + R G GK +T + ++L+H ST+ + W+ Y
Sbjct: 858 GVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTY 917
Query: 696 NEFVLTSKN---YIRTVTSVRP 714
F+ N ++R + V P
Sbjct: 918 --FMAVKSNGSVFVRDSSQVHP 937
>Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1194
Score = 231 bits (589), Expect = 3e-60
Identities = 191/682 (28%), Positives = 325/682 (47%), Gaps = 78/682 (11%)
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ--VACTQPRR 149
LPV RD L +++ ++V G+TG GKTT+IPQ +L + + + V TQPRR
Sbjct: 434 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 493
Query: 150 VAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT-ILKYMTDGMLLREAMEDHDLKRY 208
++A+SVAQRV+ E+ L VG+ +R E+K ++ L + T G+LLR+ + L+
Sbjct: 494 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 553
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S +I+DE HER + TD L+ LLK + P L++++MSAT D E+F RYF P++ VPG
Sbjct: 554 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 613
Query: 269 RTHPVEIYYTPEF-----QRDY----------------LDSAIRTVLQIHATEEKGDILL 307
+PV+ +Y + + Y LD VL I A E G IL
Sbjct: 614 FMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILC 673
Query: 308 FLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRP 367
FL G EI+ +++ Q + P++ ++P Q+ IF+ P
Sbjct: 674 FLPGWQEIKGVQQRL-----QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVG----- 723
Query: 368 GRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXX 427
RK++++TNIAETS+TI+ IV+VVD G K++ Y+ + +V L +S+A+
Sbjct: 724 VRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRA 783
Query: 428 XXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAP 487
+ G + L+ +K ++ PEILR+ L + VL+ K+ + + +F+
Sbjct: 784 GRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVD 841
Query: 488 ETMMRALEE----LNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLT 543
++A++E L + LD LT LG+ + DP LA ++ + F C +L
Sbjct: 842 SPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLV 901
Query: 544 IVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDG-DHLTLLNVYHAFKSDEAYEYGINKWC 602
+V+ L+ F +++ D K + +H G DHL + ++ ++ ++
Sbjct: 902 VVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ---DRSS 957
Query: 603 RDNFLNYRSLSAADNIR-----------NQLERLMVRYNLELNTTDYDSPRYFDN---IR 648
R+N+L +L A ++R N E +V + Y + ++
Sbjct: 958 RENYLE-ENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK 1016
Query: 649 KALAAGFFMQVAKKRSG-----GK---GYITVKDNQ-DVLIHPSTVLGH----DAEWVVY 695
L AG + + + R G GK +T + ++L+H ST+ + W+ Y
Sbjct: 1017 GVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTY 1076
Query: 696 NEFVLTSKN---YIRTVTSVRP 714
F+ N ++R + V P
Sbjct: 1077 --FMAVKSNGSVFVRDSSQVHP 1096
>Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1155
Score = 231 bits (589), Expect = 3e-60
Identities = 191/682 (28%), Positives = 325/682 (47%), Gaps = 78/682 (11%)
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ--VACTQPRR 149
LPV RD L +++ ++V G+TG GKTT+IPQ +L + + + V TQPRR
Sbjct: 395 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR 454
Query: 150 VAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT-ILKYMTDGMLLREAMEDHDLKRY 208
++A+SVAQRV+ E+ L VG+ +R E+K ++ L + T G+LLR+ + L+
Sbjct: 455 ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGV 514
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
S +I+DE HER + TD L+ LLK + P L++++MSAT D E+F RYF P++ VPG
Sbjct: 515 SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG 574
Query: 269 RTHPVEIYYTPEF-----QRDY----------------LDSAIRTVLQIHATEEKGDILL 307
+PV+ +Y + + Y LD VL I A E G IL
Sbjct: 575 FMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILC 634
Query: 308 FLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRP 367
FL G EI+ +++ Q + P++ ++P Q+ IF+ P
Sbjct: 635 FLPGWQEIKGVQQRL-----QEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVG----- 684
Query: 368 GRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXX 427
RK++++TNIAETS+TI+ IV+VVD G K++ Y+ + +V L +S+A+
Sbjct: 685 VRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRA 744
Query: 428 XXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAP 487
+ G + L+ +K ++ PEILR+ L + VL+ K+ + + +F+
Sbjct: 745 GRCQSGFAYHLFPRSRLEK-MVPFQVPEILRTPLENLVLQ-AKIHMPEKTAVEFLSKAVD 802
Query: 488 ETMMRALEE----LNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLT 543
++A++E L + LD LT LG+ + DP LA ++ + F C +L
Sbjct: 803 SPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLV 862
Query: 544 IVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDG-DHLTLLNVYHAFKSDEAYEYGINKWC 602
+V+ L+ F +++ D K + +H G DHL + ++ ++ ++
Sbjct: 863 VVSCLT-RDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ---DRSS 918
Query: 603 RDNFLNYRSLSAADNIR-----------NQLERLMVRYNLELNTTDYDSPRYFDN---IR 648
R+N+L +L A ++R N E +V + Y + ++
Sbjct: 919 RENYLE-ENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVK 977
Query: 649 KALAAGFFMQVAKKRSG-----GK---GYITVKDNQ-DVLIHPSTVLGH----DAEWVVY 695
L AG + + + R G GK +T + ++L+H ST+ + W+ Y
Sbjct: 978 GVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTY 1037
Query: 696 NEFVLTSKN---YIRTVTSVRP 714
F+ N ++R + V P
Sbjct: 1038 --FMAVKSNGSVFVRDSSQVHP 1057
>Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A
Length = 965
Score = 225 bits (573), Expect = 2e-58
Identities = 209/794 (26%), Positives = 339/794 (42%), Gaps = 130/794 (16%)
Query: 32 DHPPPAAEPLIHHDSGEFSGMQRHHTTAADAERLENGSVNPFTGGSLSEKYFGILKVRRD 91
+ P + E L+ + +FS + D E + N F + KY +LK R+
Sbjct: 114 EDPEESWENLVSDE--DFSALSLESANVEDLEPVRN----LFRKLQSTPKYQKLLKERQQ 167
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPH---LQNTQVACTQPR 148
LPV RD ++ + ++++V GETGSGK+TQ+P F+L D + + + CTQPR
Sbjct: 168 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPR 227
Query: 149 RVAAMSVAQRVAEEMDVKLGEE-----VGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 203
R++A+S+A RV +E+ + G GY IR E++ T L Y T G+LLR+ ED
Sbjct: 228 RISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDG 287
Query: 204 DLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPL 263
L S +I+DE HER++ +D L+ +LK+++ +R DL +I+MSAT+D+EKF YF P+
Sbjct: 288 LLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCPI 347
Query: 264 LAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKIS 323
L + GR++PVE+++ + + T + E L E+E E + S
Sbjct: 348 LRISGRSYPVEVFHLEDIIEE-------TGFVLEKDSEYCQKFL----EEEEEVTINVTS 396
Query: 324 LEG-----DQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIA 378
G + I Q + P Y Q I P N +++ + +
Sbjct: 397 KAGGIKKYQEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYLDKS 456
Query: 379 ETSLTIDGIVYVVDPGF-----------SKQKVYNPRIRVESL--------------LVS 413
I+G V + PG + ++ Y+ R +V +L L
Sbjct: 457 PQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPP 516
Query: 414 P-ISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLG 472
P + K T P F + T + + E S L S L++ G
Sbjct: 517 PGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 576
Query: 473 ----IDDLVHF---------DFMDPPAPETMMRALEEL-------------NFL------ 500
+ D F FMD PE + LEEL +FL
Sbjct: 577 RAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDP 636
Query: 501 -----------------ACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLT 543
AC ++ LTPLG+ + P++ + MLI F C + + T
Sbjct: 637 PQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVAT 696
Query: 544 IVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFK---SDEAYEYGINK 600
+ A+++ S F P K +D AK+ A D DHLT+ N Y +K + Y I
Sbjct: 697 LAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEIT- 755
Query: 601 WCRDNFLNYRSLSAADNIRNQLERLM--VRYNLELNTTDYDSPRYFDN--------IRKA 650
+CR NFLN SL ++++ +L +L+ ++ +T ++ R ++
Sbjct: 756 YCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSTSWEGNRASQTLSFQEIALLKAV 815
Query: 651 LAAGFFMQVAKKRSGGKGYITVK-------DNQDVLIHPSTVLGHDAE---WVVYNEFVL 700
L AG + V K +T K +HPS+V D + W++Y E +
Sbjct: 816 LVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSV-NRDLQTHGWLLYQEKIR 874
Query: 701 TSKNYIRTVTSVRP 714
++ Y+R T + P
Sbjct: 875 YARVYLRETTLITP 888
>Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1279
Score = 215 bits (548), Expect = 2e-55
Identities = 195/708 (27%), Positives = 329/708 (45%), Gaps = 89/708 (12%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVA- 143
IL+ R LPV E L+ +N +++ G TG GKTTQ+PQF+L D +QN + A
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDD---FIQNDRAAE 437
Query: 144 ----CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNK-TILKYMTDGMLLRE 198
TQPRR++A+SVA+RVA E + G+ GYS+RFE+ + + T G+LLR+
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESVLPRPHASIMFCTVGVLLRK 497
Query: 199 AMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYF 258
+ ++ S +I+DE HER + T L+ +L+ V+ P+++I+ MSAT+D F YF
Sbjct: 498 L--EAGIRGISHVIVDEIHERDINTSFLLVVLRDVVQAYPEVRIVFMSATIDTSMFCEYF 555
Query: 259 NKAPLLAVPGRTHPVEIYYTPE-FQRDYLDSAIRTVLQIHATEEKGD----ILLFLTGED 313
P L + RT+PV+ Y+ + Q + + + ++ G+ + G++
Sbjct: 556 FNCPSLKL-WRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDE 614
Query: 314 -------------------EIEDAVRK----ISLEGDQLIREQGCGPI-------SVYPL 343
E+ +A+ K +++ G L+ G I + P
Sbjct: 615 YGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPH 674
Query: 344 YGS-----LPPH------QQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVD 392
+GS LP H +Q+++F+P P KVI+STNIAETS+TI+ +VYV+D
Sbjct: 675 FGSHRYQILPLHSQIPREEQRKVFDPVPVGVT-----KVILSTNIAETSITINDVVYVID 729
Query: 393 PGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQS 452
K K++ + + SK + + G CF L + F++ L
Sbjct: 730 SCKQKVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFER-LETHM 788
Query: 453 YPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNFLACLDDDGNLT 510
PE+ R+ L L +K L + + F ++PP + ++ A L L LD + LT
Sbjct: 789 TPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELT 848
Query: 511 PLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNI 570
PLGR+ ++ P++P M+I F + + TI A P F+ ++ K+ +N
Sbjct: 849 PLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFV--NEGKQLGYIHRNF 906
Query: 571 FAHPDGDHLTLLNVYHAFKSDEAYEYGIN---KWCRDNFLNYRSLSAADNIRNQLERLMV 627
+ DH+ LL+V+ A+ D+A G ++C LN +L + QL+ +++
Sbjct: 907 AGNRFSDHVALLSVFQAW--DDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILI 964
Query: 628 RYN------LELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIH 681
L T+ D + LA G + V + K I + ++ LIH
Sbjct: 965 NSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKE--KRKILTTEGRNALIH 1022
Query: 682 PSTV--------LGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELA 721
S+V + + + + V+ E + T + +T V P L+ A
Sbjct: 1023 KSSVNCPFSSQDMNYPSPFFVFGEKIRTRAISAKGMTLVPPLQLLLFA 1070
>CE13245 [A] KOG0922 DEAH-box RNA helicase
Length = 1019
Score = 211 bits (536), Expect = 4e-54
Identities = 175/581 (30%), Positives = 262/581 (44%), Gaps = 98/581 (16%)
Query: 251 AEKFQRYFNKAPLLAVPGRTHPVEIYYT-PEFQR-----DYLDSAIRTVLQIHATEEKG- 303
AEKFQ YFN A ++ V GRT P+E+++ P+ + DY+ +A+ V +H TE KG
Sbjct: 433 AEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGR 492
Query: 304 DILLFLTGEDEIEDAVRKIS-LEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
DIL+FLTG +EIE +++ L G P+ PLY +L P +Q+ F P+
Sbjct: 493 DILVFLTGSEEIEAVASQLAELNGSLPASADVLMPV---PLYAALRPEKQKEAFRKTPQV 549
Query: 363 H---NGRPG--------------------------------------------RKVIVST 375
G+ G RKVI+ST
Sbjct: 550 WFRVKGKIGKSKIRKKDEKSKIFVARFFSRRCRHPCSGLSQKILLKFTFLSGARKVIIST 609
Query: 376 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 435
NIAETS+TI GI V+D G K K + R++ L V +SKA PGKC
Sbjct: 610 NIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKC 669
Query: 436 FRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALE 495
+RLY+ E F K ++ PEILR NLS+T LEL KLG+ + +DPP + + AL
Sbjct: 670 YRLYSREDFHK-FEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALL 728
Query: 496 ELNFLACLDDDGN------LTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLS 549
EL L + + LT +G +PL P A +L + + C E + IVA +
Sbjct: 729 ELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQ 788
Query: 550 VPSVF--IRPSKDKKRSDDAKNIFAHPDGDHLTLLNVY---------------------H 586
++F SK D + F +GDH+TLL +
Sbjct: 789 TDALFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGK 848
Query: 587 AFKS-DEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFD 645
A KS + Y I K+C DN +N + L A I QL+++ + + +T D F
Sbjct: 849 ANKSLEREYNQTIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGAD----FM 904
Query: 646 NIRKALAAGFFMQVAK-KRSGGKGYITVKDNQDVLIHPSTVLGHD-AEWVVYNEFVLTSK 703
+RKALA G F+ + R + + + + IHPS+ L ++V++E + T+
Sbjct: 905 KMRKALALGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTND 964
Query: 704 NYIRTVTSVRPEWLIELAPAYYDLDHFQKGDIKLSLERVKQ 744
+ VT + +W + P D + + + ERV+Q
Sbjct: 965 LFALQVTLIDGDW---VRPLISDHKKMRANHLAETTERVQQ 1002
Score = 146 bits (369), Expect = 1e-34
Identities = 77/165 (46%), Positives = 114/165 (68%), Gaps = 6/165 (3%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R LP+ A + + + ++ +GETGSGK+TQ+PQ + + + + +A TQPR
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIAN--SGSIAVTQPR 215
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
RVAA+S+A RVA EM +G VGY +RFEN T +KT ++YMTDG++LR+A+ L +Y
Sbjct: 216 RVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKY 275
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPD----LKIIIMSATL 249
SC+I+DEAHER+L +D+LM +L+Q D+R + L++IIMSATL
Sbjct: 276 SCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATL 320
>ECU04g0250 [A] KOG0922 DEAH-box RNA helicase
Length = 608
Score = 209 bits (531), Expect = 2e-53
Identities = 153/419 (36%), Positives = 223/419 (52%), Gaps = 49/419 (11%)
Query: 91 DLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRV 150
+LP+ +D+ L + +++ + G TG GK+T IP ++L P ++++A +PRR+
Sbjct: 7 NLPIEECKDKILSTVERSKVCIIKGPTGCGKSTYIP-YLLSSCFP---SSRIAVVEPRRI 62
Query: 151 AAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSC 210
A S+ + ++ M E VGY +RF T TDG L E E +
Sbjct: 63 AVTSLHKTLSSAM-----EGVGYKMRFNKSVGKDTRTIIYTDGSFLNEIGESE----FDY 113
Query: 211 IILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRT 270
II+DE HER++ TDI++GLL+ I K+I+MSAT+D K RYF KA +L +PG
Sbjct: 114 IIVDEVHERSVRTDIILGLLRSNIKNIKG-KVILMSATVDTAKVSRYF-KADVLDIPGAG 171
Query: 271 HPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKG---------DILLFLTGEDEIEDAVRK 321
HPV+I Y PE DY+ + + +I ++E IL+FL GE++I D
Sbjct: 172 HPVKIEYLPECTSDYIVESYCIIKRIALSKEDSWDGFEPENKGILVFLPGEEDIND---- 227
Query: 322 ISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETS 381
L G L+R+ I VY ++ +L +Q +I+EP RKVI+STNI ETS
Sbjct: 228 --LYG--LLRKLPA--IRVYKIFSALSDKEQSKIYEPCSL-------RKVILSTNICETS 274
Query: 382 LTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTE 441
LTI GI YV+D G K K+Y+ ++ L + ISK S T PG C+RLYTE
Sbjct: 275 LTIPGIGYVLDSGLQKVKIYD---QMSHLGIWSISKESADQRLGRCNRTGPGTCYRLYTE 331
Query: 442 EAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFL 500
+ ++QS PEI RS+LS L L + L F+F+D P T A+ L+FL
Sbjct: 332 NMYGTLPLQQS-PEICRSDLSQAFLLLLSYRKNPL-RFEFLDYP---TRANAISALSFL 385
>At1g48650 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1167
Score = 202 bits (515), Expect = 1e-51
Identities = 146/475 (30%), Positives = 248/475 (51%), Gaps = 35/475 (7%)
Query: 300 EEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPA 359
E G +L+F+TG D+I K LE L+ + + + +GS+ +Q+ IF+
Sbjct: 546 ERPGAVLVFMTGWDDINSL--KNQLEAHSLLGDPN--KVLLLACHGSMASSEQRLIFDRP 601
Query: 360 PESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 419
PE RK++++TN+AETS+TI+ +VYV+D G +K+ Y+ LL S ISKA+
Sbjct: 602 PEGI-----RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAA 656
Query: 420 XXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 479
PG+C+ LY ++ + PE+LR+ L S L++K LG+ + F
Sbjct: 657 ARQRRGRAGRVMPGECYHLYPRCVYEA-FADYQQPELLRTPLQSLCLQIKSLGLGSISEF 715
Query: 480 --DFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSC 537
+ PP ++ A+E L + LDDD NLTPLG+ S P++P L MLI F+C
Sbjct: 716 LSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNC 775
Query: 538 SEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPD-GDHLTLLNVYHAFKSDEAYEY 596
+ ++T+VA LSV F+ P K ++ A++ F+ D DHLTL+ Y+ +K E
Sbjct: 776 LDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHS 835
Query: 597 GINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRYFDN-IRKALAAGF 655
G + +C NFL+ ++L A D++R Q L+ +L N + ++ +R + AG
Sbjct: 836 GYD-YCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGM 894
Query: 656 FMQVAKKRSGGKGYITVKDNQD--VLIHPSTVLGH----DAEWVVYNEFVLTSKNYIRTV 709
F V + K IT+K +D VL++ S+V G+ W+V+N+ V + ++R
Sbjct: 895 FPGVCSVVNKEKS-ITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDS 953
Query: 710 TSVRPEWLI----ELAPAYYD---------LDHFQKGDIKLSLERVKQKLDKMVE 751
T+V L+ +++ +D L+ F K + + +K++LD++++
Sbjct: 954 TAVSDSVLLLFGDKISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQ 1008
Score = 176 bits (447), Expect = 9e-44
Identities = 89/203 (43%), Positives = 131/203 (63%), Gaps = 6/203 (2%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNT--QVACTQ 146
R+ LP + ++D LK NQ++V GETG GKTTQ+PQ++L E+ + + CTQ
Sbjct: 266 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 325
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLK 206
PRR++A+SV++RVA E ++GE VGY +R E T L + T G+LLR + D LK
Sbjct: 326 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 385
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAV 266
+ +++DE HER + D L+ +LK ++ RRPDLK+I+MSATL+AE F YF AP + +
Sbjct: 386 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 445
Query: 267 PGRTHPVEIYYTPEFQRDYLDSA 289
PG T+PV + F DYL+++
Sbjct: 446 PGFTYPVRAH----FLEDYLETS 464
>7300065 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1434
Score = 201 bits (511), Expect = 4e-51
Identities = 154/553 (27%), Positives = 261/553 (46%), Gaps = 66/553 (11%)
Query: 90 RDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRR 149
++L ++A+R+E L + +++ GETG GKTTQ+PQ++L + + + TQPRR
Sbjct: 113 KNLSIYAKREEILAAINAHPVVIIKGETGCGKTTQVPQYILDEAYKSGKYCNIVVTQPRR 172
Query: 150 VAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREAMEDHDLKRY 208
+AA+S+A RV +E + + + + S T L Y T G+LL + + L Y
Sbjct: 173 IAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDTRLLYCTTGVLLNNLINNKTLTHY 232
Query: 209 SCIILDEAHERTLATDILMGLLKQVI-DRRPDLKIIIMSATLDAEKFQRYF---NKAPLL 264
+ I+LDE HER D L+ ++++++ +KII+MSAT+DA++ YF N P +
Sbjct: 233 THIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIILMSATIDAKELSDYFTTTNSIPPV 292
Query: 265 AVPG--RTHPVEIYY------------------TPEFQRDYLDSAIRTVLQIHATEEK-- 302
R H +E +Y PE + +A++ ++ I E K
Sbjct: 293 ITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEINKHGYRAAVKIIVIIDNMERKAA 352
Query: 303 -------------GDILLFLTGEDEIEDAVRKIS--LEGDQLIREQGCGPISVYPLYGSL 347
G +L+FL G EI+ ++ LE D I+ +S+ + +
Sbjct: 353 IQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCMLENDPNIK------VSIVRCFSLM 406
Query: 348 PPHQQQRIFEPAPESHNGRPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIR 406
P Q+ +F P P PG RK+I++TNIAE+S+T+ + YV+D +K KV +
Sbjct: 407 TPENQRDVFNPPP------PGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASS 460
Query: 407 VESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVL 466
SL ++ SKA+ R G+ +R+ + +++E+ E PE+LR L ++VL
Sbjct: 461 FSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVL 520
Query: 467 ELKKLGIDDLVHFDFMDPPAP-----ETMMRALEELNFLACLDD------DGNLTPLGRL 515
+ K L + V + P + L+E+ L D DG+LT G +
Sbjct: 521 KAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTI 580
Query: 516 ASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPD 575
S+ PLD + ++I F+ EE + I A LS P +F + D + D
Sbjct: 581 MSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQLGDSFWMHYIFSD 640
Query: 576 GDHLTLLNVYHAF 588
G L+ ++ +
Sbjct: 641 GSGSDLVAIWRVY 653
>7290296 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1192
Score = 185 bits (469), Expect = 3e-46
Identities = 108/246 (43%), Positives = 152/246 (60%), Gaps = 11/246 (4%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
+ R LP+ A+ + ++ EN I++ GETGSGKTTQ+PQF+ E + Q+ +
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLY--EAGYAQHKMIGV 310
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
T+PRRVAA+++++RVA EM++ EV Y IRFE + T +K+MTDG+LL+E D
Sbjct: 311 TEPRRVAAIAMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFL 369
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVI----DRRPDLKIIIMSATLDAEKF---QRY 257
L +YS IILDEAHER++ TDIL+GLL +++ R LK+IIMSATL F R
Sbjct: 370 LSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRL 429
Query: 258 FN-KAPLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIE 316
F PLL V R PV I++ DY+ A R L+IH +G IL+F+TG+ E+
Sbjct: 430 FKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVN 489
Query: 317 DAVRKI 322
VRK+
Sbjct: 490 QLVRKL 495
Score = 142 bits (357), Expect = 3e-33
Identities = 132/459 (28%), Positives = 202/459 (43%), Gaps = 66/459 (14%)
Query: 316 EDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVST 375
ED ++ LE + + P+ V PLY L +Q RIF P P+ R +VST
Sbjct: 595 EDNDDELGLEDESGMGSGQRQPLWVLPLYSLLSSEKQNRIFLPVPDGC-----RLCVVST 649
Query: 376 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKC 435
N+AETSLTI I YVVD G K ++Y+ V + +V+ SKAS G C
Sbjct: 650 NVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHC 709
Query: 436 FRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALE 495
+RLY+ + + S P+I + + +L+++ +GID +VHF F PP + A
Sbjct: 710 YRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAER 769
Query: 496 ELNFLACLD----DDGNLTP----LGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAM 547
L L L+ ++ +L P LG + S+FP+ P ML S + + + +VA
Sbjct: 770 RLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAA 829
Query: 548 LSVPSVFIRPSKD-------------KKRSDDAKNIFAHPDGDHLTLLNVYHAFKSDEAY 594
LSV V I +KR A + GD + LL A ++ A
Sbjct: 830 LSVQEVLIETGVQRDEDVAPGANRFHRKRQSWAASGNYQLLGDPMVLLRAVGA--AEYAG 887
Query: 595 EYG-INKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDY------------DSP 641
G + ++C N L +++S +R QL + LN +D D+
Sbjct: 888 SQGRLPEFCAANGLRQKAMSEVRKLRVQLTN-----EINLNVSDVELGVDPELKPPTDAQ 942
Query: 642 RYFDNIRKALAAGFFMQVAKK------------RSGGKGYITVKDNQDVLIHPSTVLGHD 689
F +R+ L AG +VA+K R Y + +H S+VL
Sbjct: 943 ARF--LRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVLRQK 1000
Query: 690 A-EWVVYNEFVL-----TSKNYIRTVTSVRPEWLIELAP 722
A EWV+Y E ++K +IR +T++ PEWL+ P
Sbjct: 1001 APEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
>Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A
Length = 860
Score = 182 bits (461), Expect = 2e-45
Identities = 108/274 (39%), Positives = 159/274 (57%), Gaps = 22/274 (8%)
Query: 79 SEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEM--PH 136
S ++ IL+ R+ LP +R+ L + +++Q++V G TG GKTTQIPQF+L D + P
Sbjct: 5 SRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLSGPP 64
Query: 137 LQNTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLL 196
+ + CTQPRR++A+SVA+RVA+E ++G VGY IR E+ S+ T L Y T G+LL
Sbjct: 65 EKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLL 124
Query: 197 REAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQR 256
R D L+ S II+DE HERT +D L+ +LK ++ +RP L++I+MSATL+AE F
Sbjct: 125 RRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSD 184
Query: 257 YFNKAPLLAVPGRTHPVEIY----------YTPEFQRDYLDS----------AIRTVLQI 296
YFN P++ +PGRT PV+ + Y + Y+ S A R
Sbjct: 185 YFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAF 244
Query: 297 HATEEKGDILLFLTGEDEIEDAVRKISLEGDQLI 330
EE + L L +D ++DAV L+ QL+
Sbjct: 245 EEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLL 278
Score = 154 bits (390), Expect = 4e-37
Identities = 137/490 (27%), Positives = 221/490 (44%), Gaps = 69/490 (14%)
Query: 303 GDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
G IL+FL G EI+ + L+ + L + ++PL+ SL +QQ +F P
Sbjct: 322 GAILVFLPGLAEIKMLYEQ--LQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 379
Query: 363 HNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
K+I+STNIAETS+TID +VYV+D G K+K Y+ +ESL + +S+A+
Sbjct: 380 VT-----KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 434
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDL-----V 477
G CF ++T + +L++Q PEI R L L +K L + V
Sbjct: 435 RKGRAGRVASGVCFHVFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSV 494
Query: 478 HFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSC 537
++PP +++ + L L L D LTPLG + P+D + +++ F C
Sbjct: 495 FSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRC 554
Query: 538 SEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFK--SDEAYE 595
+ LTI A L+ S F+ P K+ ++ K FA + D+L LL Y ++ + E
Sbjct: 555 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 614
Query: 596 YGINKWCRDNFLNYRSLSAADNIRNQLERLM-----VRYNLE--------------LNTT 636
N +CR NFL+ R L +++ Q L+ R L L+ T
Sbjct: 615 ASYN-YCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDAT 673
Query: 637 DYDSPRYFDN---IRKALAAGFFMQVAKKRS-GGKGYIT-----------------VKDN 675
++ +N I L A + V + +S GK T K++
Sbjct: 674 GEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKND 733
Query: 676 QDVLIHPSTV---LGH-DAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQ 731
V IHPS+V + H D+ +++Y+E + TS+ +IR + V + Y L F
Sbjct: 734 GYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV----------SVYPLVLFG 783
Query: 732 KGDIKLSLER 741
G + + L+R
Sbjct: 784 GGQVNVQLQR 793
>At1g33390 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1237
Score = 181 bits (458), Expect = 5e-45
Identities = 106/276 (38%), Positives = 161/276 (57%), Gaps = 32/276 (11%)
Query: 87 KVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ----V 142
+ R+DLP+ E ++ + ++ G+TG GKTTQ+PQF+ Q + +
Sbjct: 236 ETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGII 295
Query: 143 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 202
TQPRRVA ++ A+RVA E+ V+LG+EVG+ +R++ K + +K+MTDG+LLRE D
Sbjct: 296 GITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQND 355
Query: 203 HDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPD----------------------- 239
L+RYS IILDEAHER+L TDIL+G+L +VI R +
Sbjct: 356 FLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITP 415
Query: 240 LKIIIMSATLDAEKF---QRYF-NKAPLLAVPGRTHPVEIYYTPEFQ-RDYLDSAIRTVL 294
LK+I+MSATL E F +R F N PL+ VP R +PV I+++ + + DY+ A + V+
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 295 QIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLI 330
IH +G IL+F+TG+ E++ K+ +L+
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELV 511
Score = 176 bits (445), Expect = 2e-43
Identities = 139/459 (30%), Positives = 215/459 (46%), Gaps = 72/459 (15%)
Query: 325 EGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTI 384
E +Q+ + G + V PLY L P Q R+FE + R V+V+TN+AETSLTI
Sbjct: 634 EAEQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEE-----RLVVVATNVAETSLTI 688
Query: 385 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAF 444
GI YVVD G K K Y+ + +ES V IS+AS T PG C+RLY+ F
Sbjct: 689 PGIKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVF 748
Query: 445 KKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLD 504
E S PEI++ + +L +K + I + +F F PP P + A L L LD
Sbjct: 749 SNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALD 808
Query: 505 DDGNLTPLGRLASQFPLDP-----MLAV--MLIGSPEFSCSEEML----TIVAMLSVPSV 553
+G LTPLG+ S +P+ P +L V ML + +S + +L VA LS+P+
Sbjct: 809 SNGGLTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNP 868
Query: 554 FIR-----------------PSKDKKRSDD-------AKNIFAHPDGDHLTLLNVYHAFK 589
I +DK+R D A++ F++P D LT+ H+F
Sbjct: 869 LIMEFEGEKKNESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSF- 927
Query: 590 SDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLM----------------------V 627
E E G+ +C N L+ +++ +++QL RL+ V
Sbjct: 928 --EVSENGMG-FCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDV 984
Query: 628 RYNLELNTTDYDSPRYFDN----IRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHP- 682
+ + T+ N + +A+ AG+ +VA+K + Y + V +H
Sbjct: 985 EKSWRITTSTSSKTPLLQNEEELLGEAICAGWADRVARKTRATE-YQACAVQEPVFLHRW 1043
Query: 683 STVLGHDAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELA 721
S+++ E +VY+E +LT++ Y+ T VRPEWL++ A
Sbjct: 1044 SSLINSAPELLVYSELLLTNRPYMHGATRVRPEWLVKHA 1082
>YMR128w [AJ] KOG0926 DEAH-box RNA helicase
Length = 1267
Score = 177 bits (449), Expect = 5e-44
Identities = 109/263 (41%), Positives = 148/263 (55%), Gaps = 26/263 (9%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVL-----FDEMPHLQN 139
I K R LPV + + ++ N +++ GETGSGKTTQ+PQF+ ++ P
Sbjct: 384 IQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPG 443
Query: 140 TQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREA 199
V TQPRRVAA+S+A+RVA E+ G +VGY IRF++ T +K+MTDG+LLRE
Sbjct: 444 -MVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREM 501
Query: 200 MEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRR-----------PDLKIIIMSAT 248
M D L +YS II+DEAHER + TDIL+G+L + + R LK+IIMSAT
Sbjct: 502 MHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSAT 561
Query: 249 LDAEKFQRYFNKA------PLLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEK 302
L F NK P+L V R PV I++ +Y D A R +IH
Sbjct: 562 LRVSDFSE--NKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPP 619
Query: 303 GDILLFLTGEDEIEDAVRKISLE 325
G IL+FLTG+ EI V+++ E
Sbjct: 620 GAILVFLTGQQEITHMVKRLRKE 642
Score = 160 bits (406), Expect = 5e-39
Identities = 99/284 (34%), Positives = 153/284 (53%), Gaps = 16/284 (5%)
Query: 278 TPEFQRDYLDSAIRTVLQ------IHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIR 331
T + + + +D +++ + Q I E++G+ EDE E+ ++ EG
Sbjct: 668 TTDLEAEDIDFSVQVIDQDKFKSAIRYEEDEGNSGNGEDEEDEEEEGFEEVLTEG----- 722
Query: 332 EQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVV 391
+ P+ V PLY LP +Q R+F+ P+ R IV+TN+AETSLTI G+ YVV
Sbjct: 723 QTANDPLYVLPLYSLLPTKEQMRVFQKPPQG-----SRLCIVATNVAETSLTIPGVRYVV 777
Query: 392 DPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQ 451
D G SK++ YN V+S V +SKAS T PG C+RLY+ F+ + +
Sbjct: 778 DSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQF 837
Query: 452 SYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTP 511
S PEILR + S VL++K + I ++++F F PP + +A++ L +L LD+ +T
Sbjct: 838 SKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITE 897
Query: 512 LGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFI 555
G+ S FPL P + ML+ S E +C ++ IV+ LSV FI
Sbjct: 898 DGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFI 941
>7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 676
Score = 175 bits (444), Expect = 2e-43
Identities = 85/148 (57%), Positives = 117/148 (78%), Gaps = 2/148 (1%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I + RR LPV A R E L + +EN +++ VGETGSGKTTQ+ Q++ E + + + C
Sbjct: 527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYL--HEDGYSKRGMIGC 584
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
TQPRRVAAMSVA+RV++EMD +LGE+VGY+IRFE+ TS +T++KYMTDG+LLRE++ D +
Sbjct: 585 TQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPE 644
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQ 232
L YS II+DEAHER+L+TD+L GLL++
Sbjct: 645 LDSYSAIIMDEAHERSLSTDVLFGLLRE 672
>At4g18470_2 [A] KOG0922 DEAH-box RNA helicase
Length = 547
Score = 174 bits (441), Expect = 5e-43
Identities = 97/191 (50%), Positives = 133/191 (68%), Gaps = 13/191 (6%)
Query: 82 YFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQ 141
Y I K R+ LPV+ R E L + + + + VGETGSGKTTQIPQ++ E + +
Sbjct: 4 YANIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYL--KEAGWAEGGR 61
Query: 142 V-ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKT-SNKTILKYMTDGMLLREA 199
V ACTQPRR+A +V+ RVAEEM V LGEEVGY+IRFE+ T S T +K++TDG+L+RE
Sbjct: 62 VIACTQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREM 121
Query: 200 MEDHDLKRYSCIILDEAHERTLATDILMGLLKQVID---------RRPDLKIIIMSATLD 250
MED L +YS I++DEAHER+++TDIL+GLLK+V RRP+L++II SAT++
Sbjct: 122 MEDPLLTKYSVIMIDEAHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIISSATIE 181
Query: 251 AEKFQRYFNKA 261
A+ +FN +
Sbjct: 182 AKTMSNFFNSS 192
Score = 103 bits (257), Expect = 1e-21
Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 34/243 (13%)
Query: 468 LKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLT-PLGRLASQFPLDPMLA 526
LK LGID+++ FD+ PP+ E M+RALE L L LDDD LT P G ++ PLDPM++
Sbjct: 254 LKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMIS 313
Query: 527 VMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYH 586
M++ S E CS E++TI A+LSV + P + +F + + V
Sbjct: 314 KMILASSELGCSHEIITIAAVLSVQVKALYPFFLCLKF----LLFIYIRNNRTYCKFVII 369
Query: 587 AFKSDEAYEYGINKWCRDNFLNYRSL------------------SAAD----NIRNQLER 624
F+ E ++ +N+ C +++ +S+ +AA+ IR+QL+R
Sbjct: 370 CFRL-ELWDLKLNR-CNLEYVSMQSVWIIARGVQKEQDEAKLRFAAAEKKVVEIRDQLKR 427
Query: 625 LMVRYNLELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKG-YITVKDNQDVLIHPS 683
+ R + L + D D + +RKA+ AGFF + G Y T++ +++V IHPS
Sbjct: 428 IARRLGITLKSCDGD----MEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVYIHPS 483
Query: 684 TVL 686
+VL
Sbjct: 484 SVL 486
>CE18218 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1402
Score = 173 bits (439), Expect = 8e-43
Identities = 158/615 (25%), Positives = 268/615 (42%), Gaps = 100/615 (16%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVL--FDEMPHLQNTQVACTQ 146
R +LPV R+ ++ EN++ + GETG GK+TQ+ QF+L F E + + +Q
Sbjct: 479 RGELPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQ 538
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT-ILKYMTDGMLLREAMEDHDL 205
PRR++A+S+A+RVA E ++GE GY++RF++ T + + T G+LLR M ++ L
Sbjct: 539 PRRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGL 596
Query: 206 KRYSCIILDEAHER----------------------------TLATDILMGLLKQVIDRR 237
+ S +I+DE HER T+ TD+ + D
Sbjct: 597 RGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVG 656
Query: 238 PDLKIIIMSATLDAEKFQ--------RYFNKAP--------------------------- 262
P I + T + F ++ + P
Sbjct: 657 PTPVITMHGRTFPVQSFYLEDILHNLQHMPEEPDQKKRKKGGPPPPDDDEGDEEVDDKGR 716
Query: 263 ---LLAVPGRTHPVEIYYTPEFQRDYLDSAIRTVLQ-IHATEEKGDILLFLTGEDEIEDA 318
+L P ++ + ++D I +L I + G +L+FL G EI
Sbjct: 717 NMNILTDPSINESLKTAMSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTL 776
Query: 319 VRKISLEGDQLIREQGCGPISVY---PLYGSLPPHQQQRIFEPAPESHNGRPG-RKVIVS 374
+ L+ Q G + Y PL+ L +Q+++F N PG RK+IVS
Sbjct: 777 CNR-------LLEHQEFGQANKYEILPLHSQLTSQEQRKVF-------NHYPGKRKIIVS 822
Query: 375 TNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXXXXXXXXXTRPGK 434
TNIAETS+TID +VYV+D +K+++Y + SK + R G
Sbjct: 823 TNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGY 882
Query: 435 CFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMR 492
F L ++ F + L + E+LR L L +K L + + F + PP + ++
Sbjct: 883 AFHLCSKMRF-EALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPYDMVVE 941
Query: 493 ALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPS 552
+ L + LD + LT LG++ ++ P++P++A +LI M + + +S P+
Sbjct: 942 SEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPT 1001
Query: 553 VFIRPSKDKKRSDDAKNIFA-HPDGDHLTLLNVYHAFKSDEAYEYGIN----KWCRDNFL 607
F+ K R + FA + DH+ +++V ++ EA + G + ++C L
Sbjct: 1002 PFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYR--EAVQMGASAAEREFCERYSL 1059
Query: 608 NYRSLSAADNIRNQL 622
+ L D R QL
Sbjct: 1060 SNPVLKMTDGARRQL 1074
>7292573 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1280
Score = 172 bits (435), Expect = 2e-42
Identities = 96/242 (39%), Positives = 145/242 (59%), Gaps = 10/242 (4%)
Query: 43 HHDSGEFSGMQRHHTTAADAERLENGSV-NPFTGGSLSEKYFGILKVRRDLPVHAQRDEF 101
H+ G+ S H +A+ EN + F E+Y I+ R+ LP A+ +
Sbjct: 395 HYARGQTSRNDGGHQRNVEAQTRENRRLLQQFVERRKEERYQKIIDGRKQLPAFAEIERI 454
Query: 102 LKIYQENQIMVFVGETGSGKTTQIPQFVLFD------EMP---HLQNTQVACTQPRRVAA 152
L + + + ++V GETG GK+TQ+PQF+L + ++P +L + ++ CTQPRR++A
Sbjct: 455 LALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSA 514
Query: 153 MSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCII 212
+ VA+RVA E ++G+ VGY IR ENK S T L + T G+LLR D L + +I
Sbjct: 515 IGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVI 574
Query: 213 LDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRTHP 272
+DE HER+ +D L+ +LK ++ R DLK+I+MSATL+A F YF AP+L +PGRT P
Sbjct: 575 VDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFP 634
Query: 273 VE 274
V+
Sbjct: 635 VQ 636
Score = 159 bits (403), Expect = 1e-38
Identities = 146/526 (27%), Positives = 230/526 (42%), Gaps = 66/526 (12%)
Query: 232 QVIDRRPDLKIIIMSATLDAEKFQRYFNKA-PLLAVPGRTHPVEIYYTPEFQRDYLDSAI 290
Q P KI TL AE +QRY + P P+ I PE ++S +
Sbjct: 679 QASGEAPGKKIKDEKLTL-AETYQRYAEYSKPTCKSIYLMEPMTI--NPEL----IESVL 731
Query: 291 RTVLQ-IHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPP 349
+ +++ H +G IL+FL G EI+ + D + G + PL+ +L
Sbjct: 732 KYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLL---DNALFSPRAGKFILVPLHSALSG 788
Query: 350 HQQQRIFEPAPESHNGRPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 408
Q +F+ AP PG RK+++STNIAETS+TID V+VVD G K+K ++ +E
Sbjct: 789 EDQALVFKKAP------PGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNME 842
Query: 409 SLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLEL 468
SL + +S+A+ PG C LYT ++ ++ Q PEI R L VL +
Sbjct: 843 SLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRI 902
Query: 469 KKLGI-----DDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDP 523
K L V + ++ P ++++ AL L + LD + LTPLG + P+D
Sbjct: 903 KTLQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDV 962
Query: 524 MLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLN 583
+ +++ F C + +LTI A LS S F+ P + +D K +FA + DHLT+LN
Sbjct: 963 RIGKLMLYGAIFQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLN 1022
Query: 584 VYHAFKS-DEAYEYGINK-WCRDNFLNYRSLSAADNIRNQLERLMVRYNLE--------- 632
Y + Y ++ + ++FL+ +L +++ Q L+V
Sbjct: 1023 AYRKWLDVARRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPIDVPRRRK 1082
Query: 633 ------LNTTDYDSPRYFDNIR---KALAAGFFMQVAKKRSGGKGYI------------- 670
L T + DN R L A + + K + + YI
Sbjct: 1083 NACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGAVPREPSH 1142
Query: 671 -----TVKDNQDVLIHPSTVLGH----DAEWVVYNEFVLTSKNYIR 707
+ + V IHPS+V A ++V+ E V TS YIR
Sbjct: 1143 HDLRFKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIR 1188
>CE29563 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1148
Score = 169 bits (428), Expect = 1e-41
Identities = 98/247 (39%), Positives = 150/247 (60%), Gaps = 13/247 (5%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVAC 144
I K R +LP+ A+ ++ EN + V GETGSGKTTQIPQF L++ + +
Sbjct: 229 IQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQF-LYEAGYASEGELIGI 287
Query: 145 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 204
T+PRRVAA+++AQRV E+ +EV Y IR+E S T + +MTDG+L++E +D
Sbjct: 288 TEPRRVAAIAMAQRVGVELAKP--DEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVM 345
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRP----DLKIIIMSATLDAEKFQRYFNK 260
LK+YS I++DEAHER++ +D+L+G+L +++ R L+++IMSATL + F +
Sbjct: 346 LKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDF-THKKL 404
Query: 261 APLLA-----VPGRTHPVEIYYTPEFQRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEI 315
PLL V R PV +++ DY+ SA R +IH T G IL+F+TG+ E+
Sbjct: 405 FPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQHEV 464
Query: 316 EDAVRKI 322
+ + K+
Sbjct: 465 KQLITKL 471
Score = 132 bits (333), Expect = 2e-30
Identities = 125/463 (26%), Positives = 204/463 (43%), Gaps = 47/463 (10%)
Query: 298 ATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFE 357
A E D F G+ ++ D + S+ C P+ PLY L +Q+R+F+
Sbjct: 539 AAEAFDDYEEFENGDGDLSDGKVENSIGAPPA----DCEPLYCLPLYSLLSMGKQRRVFD 594
Query: 358 PAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK 417
P R ++STN+AETSLTI G+ YV+D GF K+++Y+ V V IS+
Sbjct: 595 ETPAGM-----RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQ 649
Query: 418 ASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLV 477
AS G +RLY+ + ++ ++ + PEIL VL LK + I +V
Sbjct: 650 ASGDQRAGRAGRISAGHAYRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVV 708
Query: 478 HFDFMDPPAPETMMRALEELNFLACLDD-------DGNLTPLGRLASQFPLDPMLAVMLI 530
+F F P + + A + L L L + + +T LG+ + FPL P A +
Sbjct: 709 NFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIA 768
Query: 531 GSPEFSCSEEMLTIVAMLSV-----PSVFIRPSKDKKRSDDAKNIF-------AHPDGDH 578
+ + + + ++++LSV P +R ++ + KN+ +H
Sbjct: 769 MADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEETKELMKNVLKERRRWCSHTGARR 828
Query: 579 LTLLNV-YHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTT- 636
L L V HA E +Y + C L ++L A +R QL ++ + +
Sbjct: 829 LGDLKVLMHAASVAEQIKYNARE-CEKVGLRVKALVEARKLRQQLTNIVNASCKKEHAAA 887
Query: 637 -DYDSPRYFDN----IRKALAAGFFMQVAKK--RSGGK------GYITVKDNQDVLIHP- 682
D D P D +R+ + A F ++A++ RS G+ Y T V I P
Sbjct: 888 LDSDLPPPTDQQAQLLRQMVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPC 947
Query: 683 STVLGHDAEWVVYNEFV-LTSKNYIRTVTSVRPEWLIELAPAY 724
S V + E+V+Y E V + K + +V +V EWL LA +Y
Sbjct: 948 SVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESY 990
>At1g58060 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1453
Score = 166 bits (421), Expect = 1e-40
Identities = 112/304 (36%), Positives = 162/304 (52%), Gaps = 42/304 (13%)
Query: 79 SEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFD--EMPH 136
++KY +LK R LP+ ++ L+ +E ++V GETGSGKTTQ+PQF+L D + H
Sbjct: 601 TQKYKDMLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGH 660
Query: 137 LQNTQVACTQPRRVAAMSVAQRVAEE-------MDVKLGEEVGYSIRFENKTSNKTILKY 189
+ CTQPRR+AA+SVAQRVA+E +D L VGY +R E+ S+KT L +
Sbjct: 661 GGYCNIICTQPRRIAAISVAQRVADERCESSPGLDDSL---VGYQVRLESARSDKTRLLF 717
Query: 190 MTDGMLLREAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRP------DLKII 243
T G+LLR+ D L + II+DE HER+L D L+ +LK +I+++ LK+I
Sbjct: 718 CTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVI 777
Query: 244 IMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEFQR--DYL-----DSAIRTVLQI 296
+MSAT+DA+ F RYF P++ GRTHPV ++ E +YL +A+R+ I
Sbjct: 778 LMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSI 837
Query: 297 -----HATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQ 351
+ +G L L G + D L+ E P V Y S
Sbjct: 838 KDKLGSVNDRRGKKNLVLAGWGD------------DYLLSEDCLNPFYVSSNYNSYSDQT 885
Query: 352 QQRI 355
QQ +
Sbjct: 886 QQNL 889
Score = 161 bits (407), Expect = 4e-39
Identities = 133/475 (28%), Positives = 218/475 (45%), Gaps = 62/475 (13%)
Query: 293 VLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQ 352
+ I T E+G IL+FL G EI + ++ R +G + PL+ S+ +Q
Sbjct: 906 ICHIDDTCEEGAILIFLPGVAEIYMLLDMLAAS----YRFRGPAADWLLPLHSSIASSEQ 961
Query: 353 QRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLV 412
+++F P+ RKVI +TNIAETS+TID +VYV+D G K+ YNP+ ++ S++
Sbjct: 962 RKVFLRPPKGL-----RKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVE 1016
Query: 413 SPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLG 472
IS+A+ +PG CF LYT F+K + PE+LR L L++K LG
Sbjct: 1017 DWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLG 1076
Query: 473 IDDLVHF--DFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLI 530
+ + F ++PP+ M A+ L+ + ++ D LTPLG ++ P+D ++ ML+
Sbjct: 1077 LGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLL 1136
Query: 531 GSPEFSCSEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDG-------------D 577
F C +L+I A LS S FI P +K+ D K +G D
Sbjct: 1137 YGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSD 1196
Query: 578 HLTLLNVYHAFKS--DEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMV-------- 627
HL ++ Y + E ++C FL+ + ++R Q L+
Sbjct: 1197 HLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLP 1256
Query: 628 ---RYNLELNTTDYDSP-----RYFDNIRKALAAGFFMQVA---------------KKRS 664
NL++ +D P + + ++ L AG + +A K+ +
Sbjct: 1257 KTGEENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGN 1316
Query: 665 GGKGYITVKD-NQDVLIHPSTVLGH----DAEWVVYNEFVLTSKNYIRTVTSVRP 714
K Y D ++V IHPS++ + ++V+ E V T+K Y+R T V P
Sbjct: 1317 QTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSP 1371
>Hs7661934 [A] KOG0922 DEAH-box RNA helicase
Length = 576
Score = 164 bits (415), Expect = 5e-40
Identities = 80/188 (42%), Positives = 124/188 (65%), Gaps = 5/188 (2%)
Query: 89 RRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPR 148
R LP+ + L+ +E+Q++V G+TG GK+TQ+PQ++L H VACTQPR
Sbjct: 159 RAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH-----VACTQPR 213
Query: 149 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRY 208
R+A +S+A+RV E + G +VGY IRFE+ S T + ++T G+LLR+ + L +Y
Sbjct: 214 RIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQY 273
Query: 209 SCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPG 268
+I+DE HER L D L+G+L++++ RPDLK+I+MSAT++ F YF+ AP++ VPG
Sbjct: 274 EVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQVPG 333
Query: 269 RTHPVEIY 276
R P+ ++
Sbjct: 334 RLFPITVF 341
Score = 134 bits (336), Expect = 7e-31
Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 8/206 (3%)
Query: 355 IFEPAPESHNGRPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVS 413
+F+ AP PG RK I+STNIAETS+TIDGI +VVD G K+ Y+P+ +++ L
Sbjct: 340 VFDVAP------PGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEF 393
Query: 414 PISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGI 473
IS+AS T PG CFRLY E + PEI R L S VL++K + +
Sbjct: 394 WISQASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSV 452
Query: 474 DDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSP 533
D F F++PP P ++ A+ L LD LTP+G L +Q P+D ++ MLI
Sbjct: 453 GDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGS 512
Query: 534 EFSCSEEMLTIVAMLSVPSVFIRPSK 559
FS E +LTI A LSV S F R ++
Sbjct: 513 MFSLVEPVLTIAAALSVQSPFTRSAQ 538
>At2g47680 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1015
Score = 159 bits (403), Expect = 1e-38
Identities = 147/521 (28%), Positives = 242/521 (46%), Gaps = 76/521 (14%)
Query: 92 LPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVA 151
LP+ A + + EN++ + VGE G GK++Q+PQF+L M + CTQPRR A
Sbjct: 26 LPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANM-----APILCTQPRRFA 80
Query: 152 AMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH-DLKRYSC 210
++VA+ VA+ + LG E+GY I + + + + T G+LL E ++ + +Y
Sbjct: 81 VVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDKGLNALKYKV 140
Query: 211 IILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRT 270
IILDE HER++ +D+++ +KQ + + DL++++MSAT D +++ YF + GR
Sbjct: 141 IILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKEL------GRG 194
Query: 271 HPVEIYYTPE------FQRDYL---------------------------DSAIRTVLQ-- 295
VE+ P FQR L D+ I+ LQ
Sbjct: 195 ERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNL 254
Query: 296 IHATEEKGDILLFL-TGEDEIEDAV-----RKISLEGDQLIREQGCGPISVYPLYGSLPP 349
IH D++L++ E +IE ++ SLE E V+ L+ S+
Sbjct: 255 IH------DLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVHILHRSIDT 308
Query: 350 HQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVES 409
Q + R RKVI++TNIAE+S+TI + YV+D S Q ++P + ++
Sbjct: 309 EQALAAMKIC------RSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDA 362
Query: 410 LLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVL--- 466
+ + +S++ T G+ +RL AF +L E P IL+ +L VL
Sbjct: 363 VQLVWVSRSQAEQRRGRTGRTCDGEVYRL-VPSAFFNKLEEHEPPSILKLSLRQQVLHIC 421
Query: 467 --ELKKLGIDDLVHFDFMDPPAPETMMRALEELNFLACL--DDDGNLTP--LGRLASQFP 520
E + + + + MDPP P+ + AL L + L G P GRL + FP
Sbjct: 422 CTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFP 481
Query: 521 LDPMLAVMLIGSPEFSCSEE-MLTIVAMLSVPSVFIRPSKD 560
L +++++ E + +L V M ++P P D
Sbjct: 482 LSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGD 522
>Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A
Length = 688
Score = 155 bits (393), Expect = 2e-37
Identities = 138/490 (28%), Positives = 221/490 (44%), Gaps = 69/490 (14%)
Query: 303 GDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
G IL+FL G EI+ + L+ + L + ++PL+ SL +QQ +F P
Sbjct: 150 GAILVFLPGLAEIKMLYEQ--LQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 207
Query: 363 HNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
K+I+STNIAETS+TID +VYV+D G K+K Y+ +ESL + +S+A+
Sbjct: 208 VT-----KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 262
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDL-----V 477
G CF L+T + +L++Q PEI R L L +K L + V
Sbjct: 263 RKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSV 322
Query: 478 HFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVMLIGSPEFSC 537
++PP +++ + L L L D LTPLG + P+D + +++ F C
Sbjct: 323 FSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRC 382
Query: 538 SEEMLTIVAMLSVPSVFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYHAFK--SDEAYE 595
+ LTI A L+ S F+ P K+ ++ K FA + D+L LL Y ++ + E
Sbjct: 383 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVR 442
Query: 596 YGINKWCRDNFLNYRSLSAADNIRNQLERLM-----VRYNLE--------------LNTT 636
N +CR NFL+ R L +++ Q L+ R L L+ T
Sbjct: 443 ASYN-YCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDAT 501
Query: 637 DYDSPRYFDN---IRKALAAGFFMQVAKKRS-GGKGYIT-----------------VKDN 675
++ +N I L A + V + +S GK T K++
Sbjct: 502 GEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSAELKFVTKND 561
Query: 676 QDVLIHPSTV---LGH-DAEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLDHFQ 731
V IHPS+V + H D+ +++Y+E + TS+ +IR + V + Y L F
Sbjct: 562 GYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV----------SVYPLVLFG 611
Query: 732 KGDIKLSLER 741
G + + L+R
Sbjct: 612 GGQVNVQLQR 621
>7302201 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1293
Score = 153 bits (387), Expect = 8e-37
Identities = 87/214 (40%), Positives = 131/214 (60%), Gaps = 7/214 (3%)
Query: 81 KYFGILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQN- 139
+Y L+ R LP+ A R E L +N +++ G TG GKTTQI Q++L D + Q
Sbjct: 373 EYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGG 432
Query: 140 -TQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKT-ILKYMTDGMLLR 197
+ TQPRR++A+SVA+RVA E +LG+ VGYS+RFE+ + + T G+LLR
Sbjct: 433 YANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLR 492
Query: 198 EAMEDHDLKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRY 257
+ + L+ S II+DE HER + +D L+ +L+ ++D PDL +I+MSAT+D KF +Y
Sbjct: 493 KL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKY 550
Query: 258 FNKAPLLAVPGRTHPVEIYYTPEF--QRDYLDSA 289
F P+L VPGR PV+ ++ + D++ SA
Sbjct: 551 FGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSA 584
Score = 119 bits (298), Expect = 2e-26
Identities = 101/410 (24%), Positives = 188/410 (45%), Gaps = 34/410 (8%)
Query: 293 VLQIHATEEKGDILLFLTGEDEIEDAVRKI---SLEGDQLIREQGCGPISVYPLYGSLPP 349
++ I + G IL+FL G + I ++ + ++ GD + P + +P
Sbjct: 644 LMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDT-------SQYQILPCHSQIPR 696
Query: 350 HQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVES 409
+Q+++FEP PE K+I+STNIAETS+TID IV+V+D ++ K++ + S
Sbjct: 697 DEQRKVFEPVPEGVT-----KIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTS 751
Query: 410 LLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELK 469
SK + RPG CF L + F + L + PE+ R+ L L +K
Sbjct: 752 YATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARF-QALEDNLTPEMFRTPLHEMALTIK 810
Query: 470 KLGIDDLVHF--DFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAV 527
L + + HF ++PP + ++ A L + CLD + LTPLGRL ++ P++P L
Sbjct: 811 LLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGK 870
Query: 528 MLIGSPEFSCSEEMLTIVAMLSVPS-VFIRPSKDKKRSDDAKNIFAHPDGDHLTLLNVYH 586
M++ F C++ M + + S S VF ++ ++ K + DH+ ++
Sbjct: 871 MMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQ 930
Query: 587 AFKSD-EAYEYGINKWCRDNFLNYRSLSAADNIRNQL----------ERLMVRYNLELNT 635
++ + + E+ ++C L +++ + + QL E M+ + ++
Sbjct: 931 MWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVD-ER 989
Query: 636 TDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKDNQDVLIHPSTV 685
D D P D L G + + + K + +++ L+H ++V
Sbjct: 990 IDGDDP-VLDVSLALLCLGLYPNICVHKE--KRKVLTTESKAALLHKTSV 1036
>At2g30800 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1299
Score = 151 bits (382), Expect = 3e-36
Identities = 75/197 (38%), Positives = 123/197 (62%), Gaps = 4/197 (2%)
Query: 85 ILKVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNT-QVA 143
I K+R LP+ + +D + NQ+++ GETG GKTTQ+PQ++L + T ++
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 144 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 203
CTQPRR++AMSV++R++ E +GE +GY +R ++K + + + T+G+LLR +
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG 299
Query: 204 DLKRYSCI---ILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNK 260
+ S I I+DE HER +D ++ +++ ++ P L++I+MSATLDAE+F YF
Sbjct: 300 SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGG 359
Query: 261 APLLAVPGRTHPVEIYY 277
P++ VPG T+PV Y
Sbjct: 360 CPVVRVPGFTYPVRTLY 376
Score = 124 bits (312), Expect = 4e-28
Identities = 103/380 (27%), Positives = 179/380 (47%), Gaps = 27/380 (7%)
Query: 295 QIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQR 354
+I E G IL+FL G D+I +++ LE + L+ +P +Q++
Sbjct: 544 KICGDSEDGAILVFLPGWDDINKTRQRL-LENPFFADS---AKFDIICLHSMVPAGEQKK 599
Query: 355 IFEPAPESHNGRPG-RKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVS 413
+F P PG RK++++TNIAE+++TID +VYV+D G K+K Y+P V +L S
Sbjct: 600 VFNRPP------PGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSS 653
Query: 414 PISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLG- 472
+SKA+ +PG C+ LY+ + + PEI R + L++K L
Sbjct: 654 WVSKANAKQRQGRAGRCQPGICYHLYS-RLRAASMPDFKVPEIKRMPVEELCLQVKILDP 712
Query: 473 ---IDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAVML 529
+D + +DPP +++ AL L + L LT LG P+ P+++ ML
Sbjct: 713 NCKTNDFLQ-KLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKML 771
Query: 530 IGSPEFSCSEEMLTIVAMLSVPSVFIRPSK--DKKRSDDAKNIFAH---PDGDHLTLLNV 584
+ +C + LT+ F P +++++ AK A D DHL ++
Sbjct: 772 FFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAA 831
Query: 585 YHAFKSDEAYEYGIN-KWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDSPRY 643
+ +K+ A G++ ++C F++ ++ D +R+QLE + R+ + N S
Sbjct: 832 FECWKN--AKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNS 889
Query: 644 FDN--IRKALAAGFFMQVAK 661
D +R LA G + V +
Sbjct: 890 RDPGILRAVLAVGLYPMVGR 909
>At1g06670 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1576
Score = 150 bits (380), Expect = 5e-36
Identities = 101/346 (29%), Positives = 176/346 (50%), Gaps = 28/346 (8%)
Query: 3 KRRFSNEHVSAVETSIPEHAAEIAEKLTKDHPP----PAAEPLIHHDSGEFSG------M 52
K R S + + V S P A + L +PP L + +G +
Sbjct: 123 KTRISPKKLKCV--SFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTTGNVNSNWKDDFF 180
Query: 53 QRHHTTAADAERLENGSVNPFTGGSLSEKYFGILKVRRDLPVHAQRDEFLKIYQENQIMV 112
++ H T D +EN V+ + + I + R LP+ + RD + + NQ+++
Sbjct: 181 KKPHMTKHD---IENNVVSLSSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVL 237
Query: 113 FVGETGSGKTTQIPQFVLFDEMPHLQNT--QVACTQPRRVAAMSVAQRVAEEMDVKLGEE 170
GETG GKTTQ+PQ++L D M H + ++ CTQPRR++A+SV+ R++ E +G
Sbjct: 238 IAGETGCGKTTQVPQYLL-DHMWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRT 296
Query: 171 VGYSIRFENKTSNKTILKYMTDGMLLREAME---DHDLKRYSCIILDEAHERTLATDILM 227
VGY +R +++ ++ + + T+G+LLR + + + + II+DE HER +D ++
Sbjct: 297 VGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFML 356
Query: 228 GLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLLAVPGRTHPVEIYYTPEF------ 281
+L+ ++ P L++I+MSATLDAE+F YF P++ VPG T+PV ++ +
Sbjct: 357 MILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNS 416
Query: 282 -QRDYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEG 326
+ +L SA++ + + + DE + V +S EG
Sbjct: 417 DKNSHLLSAVKRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEG 462
Score = 120 bits (300), Expect = 1e-26
Identities = 97/383 (25%), Positives = 182/383 (47%), Gaps = 23/383 (6%)
Query: 290 IRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPP 349
++ + +I + + G IL+FL G +EI K L D+ + L+ +P
Sbjct: 563 VKLMKKICSDSKDGAILVFLPGWEEISKTKEK--LLDDRFFAHSA--KFIILCLHSRVPA 618
Query: 350 HQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVES 409
+Q+++F P R RK++++TNIAE+++TID +VYV+D G K+K Y+P V +
Sbjct: 619 EEQKKVFNRPP-----RGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVST 673
Query: 410 LLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELK 469
L S +SKA+ + G C+ LY+ + L E PE++R + L++K
Sbjct: 674 LQSSWVSKANAKQRAGRAGRCQAGICYHLYS-KLRAASLPEYRVPEVMRMPVDELCLQVK 732
Query: 470 KL----GIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPML 525
L ++D + MDPP +++ AL L + L + LT LG+ Q P+ P +
Sbjct: 733 MLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRI 791
Query: 526 AVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRPSK--DKKRSDDAKNIFAHPDG---DHLT 580
+ M+ + +C + L + F P D+K++ AK+ A G DHL
Sbjct: 792 SKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLA 851
Query: 581 LLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVRYNLELNTTDYDS 640
+ + +K+ +A ++C F++ + D++ +L+ + R+ + +++ S
Sbjct: 852 TVAAFQCWKNAKASGQA-KEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCS 910
Query: 641 PRYFDN--IRKALAAGFFMQVAK 661
D +R +A G + + +
Sbjct: 911 LNAHDPGILRAVIAVGLYPMLGR 933
>CE05718 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1425
Score = 145 bits (366), Expect = 2e-34
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 87 KVRRDLPVHAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQ 146
KVR LP D+ LK +++ G TG GKTTQ+PQF+L + + ++ +V TQ
Sbjct: 176 KVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVMVTQ 235
Query: 147 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLK 206
PRR+AA+S+A+RVA E +G VGY +R +++ S+ T+L Y T G+LLR D
Sbjct: 236 PRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPVAS 295
Query: 207 RYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDA--EKFQRYF--NKAP 262
+ I++DE HER + TD L+ L++ + RPDLK+I+MSAT++ + F YF +
Sbjct: 296 GITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNYFENHSMD 355
Query: 263 LLAVPGRTHPVEIYY 277
++ + R V+++Y
Sbjct: 356 VIRIESRAFDVKVFY 370
Score = 132 bits (333), Expect = 2e-30
Identities = 115/431 (26%), Positives = 200/431 (45%), Gaps = 59/431 (13%)
Query: 303 GDILLFLTGEDEIEDAVRKISLEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPES 362
G IL+FL G ++I+ ++ I + L + + V PL+ + IF+ P+
Sbjct: 645 GTILVFLPGYEDIQQMLKAIDCWKNSLKNMKN---VIVLPLHSQMTSINHGDIFKSVPKD 701
Query: 363 HNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASXXX 422
RK+I++TNIAE S+TI+ +++VVD G K+K ++ ++ +L V PI++++
Sbjct: 702 T-----RKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQ 756
Query: 423 XXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFM 482
G C RLYTE+ + + E E+ R+ + L K L +F+
Sbjct: 757 RSGRAGRVANGYCIRLYTEQEY-NSMPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFL 815
Query: 483 ----DPPAPETMMRALEELNFLACL-------DDDGN--------------------LTP 511
+PP E++++A+ L + D+ GN LT
Sbjct: 816 SLAPEPPEKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEEAENSENPEDPELTD 875
Query: 512 LGRLASQFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRP-SKDKKRSDDAKNI 570
LGRL ++ PLDP L+ ML+ C ++ +VA+L+ ++ S+D+ K
Sbjct: 876 LGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSKMKFE 935
Query: 571 FAHPD-GDHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLMVR- 628
A D DHL + + + F S + N++CRD+FLN+ ++ R QL R +VR
Sbjct: 936 MAQQDLSDHLLYIRLCNEFCSKNNSQQ--NQFCRDHFLNFSTMRMVQGTRRQLLRELVRA 993
Query: 629 --YNLELN------TTDYDSPRY---FDNIRKALAAGF--FMQVAKKRSGGKGYITVKDN 675
N+ N TD+ ++ + I+ +AAG F+ V+ S K T D
Sbjct: 994 KLINISPNRDVLTVLTDHHFNQFSQCWPMIQAVIAAGCYPFIGVSASESNLKKVQTFND- 1052
Query: 676 QDVLIHPSTVL 686
+ +HPS+++
Sbjct: 1053 KPAFLHPSSMV 1063
>HsM13375825 [A] KOG0922 DEAH-box RNA helicase
Length = 294
Score = 99.4 bits (246), Expect = 2e-20
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 17/222 (7%)
Query: 518 QFPLDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIR---PSKDKKRSDDAKNIFAHP 574
+FPL P L +I + C + +L I AMLSV +VFIR P K+ + + A
Sbjct: 3 EFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKA 62
Query: 575 DG--DHLTLLNVYHAFKSDEAYEYGINKWCRDNFLNYRSLSAADNIRNQLERLM--VRYN 630
G D TL ++ KS A WC+ +++++R L +A + QL L+ ++
Sbjct: 63 GGFNDFATLAVIFEQCKSSGAPA----SWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQ 118
Query: 631 LELNTTDYDSPRYFDNIRKALAAGFFMQVAKKRSGGKGYITVKD-NQDVLIHPSTVLGHD 689
+ ++ P++ + +R+ L AG+F VA +RS G+ + T+ V IHPS+ L
Sbjct: 119 SDFPKETFEGPKH-EVLRRCLCAGYFKNVA-RRSVGRTFCTMDGRGSPVHIHPSSALHEQ 176
Query: 690 ---AEWVVYNEFVLTSKNYIRTVTSVRPEWLIELAPAYYDLD 728
EW++++E ++T+K Y R V +R EW+ +L P ++ +
Sbjct: 177 ETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFN 218
>Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 324
Score = 73.6 bits (179), Expect = 1e-12
Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 74/257 (28%)
Query: 146 QPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSN-KTILKYMTDGMLLREAMEDHD 204
QPRR++A+SVA+RVA E + G+ GY++R E+ + + T G+
Sbjct: 122 QPRRISAVSVAERVAFERGEETGKSCGYTVRIESVLPRFHASITFCTVGI---------- 171
Query: 205 LKRYSCIILDEAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNKAPLL 264
S + + E HER + TD L+ +L+ V P++ I++MSAT+D
Sbjct: 172 ----SHVTVGEIHERDINTDFLLIVLRDVFQAYPEVHIVLMSATIDTN------------ 215
Query: 265 AVPGRTHPVEIYYTPEFQRDY-LDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKIS 323
Y T +Y L+ IR + ++K +D+ +D
Sbjct: 216 ---------ITYLTGSSLAEYFLEDCIRMTHFVPPPKDK-------KKKDKDDDGG---- 255
Query: 324 LEGDQLIREQGCGPISVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVIVSTNIAETSLT 383
E D + EQ Q+++ +P P KVI STNIAETS+T
Sbjct: 256 -EDDYIPPEQ------------------QRKVLDPVPVGVT-----KVIFSTNIAETSIT 291
Query: 384 IDGIVYVVDPGFSKQKV 400
I+ +VYV+ G +QKV
Sbjct: 292 INDVVYVI--GSCQQKV 306
>Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 688
Score = 66.6 bits (161), Expect = 1e-10
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 11/183 (6%)
Query: 351 QQQRIFEPAPESHNGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESL 410
+Q+++F+P P KVI+STNIAETS+ I+ VYVVD K K++ + +
Sbjct: 298 EQRKVFDPVPVGVT-----KVILSTNIAETSIIIND-VYVVDSCKQKVKLFATHNNMTNY 351
Query: 411 LVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKK 470
SK + RPG CF L + F++ L PE+ ++ L L +K
Sbjct: 352 ATVWGSKTNLEQWKGQPGRIRPGFCFHLCSRARFER-LETHMTPEMFQTPLHEVALSIKL 410
Query: 471 ---LGIDDLVHFDFMDPPAPETMMRALEELNFLACLDDDGNLTPLGRLASQFPLDPMLAV 527
+GI + P + ++ A L L LD + +LTPLGR+ + ++P
Sbjct: 411 PCLVGIGQFLAKAIETLPL-DAVIEAEHTLRELDALDANDDLTPLGRILANLLIEPRFGK 469
Query: 528 MLI 530
M+I
Sbjct: 470 MMI 472
>7291655_1 [A] KOG0920 ATP-dependent RNA helicase A
Length = 514
Score = 65.1 bits (157), Expect = 4e-10
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 95 HAQRDEFLKIYQENQIMVFVGETGSGKTTQIPQFVLFDEMPHLQNTQVACTQPRRVAAMS 154
H+ DE L+ ++++V+ K+ +P +L D N ++ C + + + A
Sbjct: 151 HSLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAILATY 210
Query: 155 VAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLKRYSCIILD 214
+QR A +LGE VG + + + S+ T + Y T LR ++ + S ++++
Sbjct: 211 NSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLR-SLTSQQFRNISHLVVN 269
Query: 215 EAHERTLATDILMGLLKQVIDRRPDLKIIIMSATLDAEKFQRYFNK 260
+ H TDIL+ ++ + +L+++++S + +KF +F +
Sbjct: 270 DVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGE 315
>Hs17433962 [A] KOG0920 ATP-dependent RNA helicase A
Length = 155
Score = 55.8 bits (133), Expect = 2e-07
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 407 VESLLVSPISKASXXXXXXXXXXTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVL 466
+ SL+ + +SKAS R G CF YT E ++ ++ S PEIL L L
Sbjct: 1 MSSLVETFVSKASALQCEGRAGQDRDGFCFWGYTREKYEG-FMDYSVPEILHVPLEKLCL 59
Query: 467 ELKKLGID--DLVHFDFMDPPAPETMMRALEELNFL----ACLDDDGNLTPLGRLASQFP 520
+ + D + + F +DPP + ++ NFL AC ++ LTPLG+ + P
Sbjct: 60 HIMRCNHDSPEDILFKALDPPQLPVISHSM---NFLQKTGACKLNEPQLTPLGQHLAALP 116
Query: 521 LDPMLAVMLIGSPEFSCSEEMLTIVAMLSVPSVFIRP 557
+ LI F C + + T+ A+++ S F P
Sbjct: 117 VYVKTGKTLIFGTVFGCLDPVATLAAVITEKSPFTTP 153
>CE27331 [O] KOG0731 AAA+-type ATPase containing the peptidase M41 domain
Length = 223
Score = 52.0 bits (123), Expect = 3e-06
Identities = 23/44 (52%), Positives = 30/44 (67%)
Query: 284 DYLDSAIRTVLQIHATEEKGDILLFLTGEDEIEDAVRKISLEGD 327
DY SA+ TV+ IH E GDIL+FLTG+DE+ED K+ G+
Sbjct: 148 DYCQSAVNTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELGE 191
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,811,455
Number of Sequences: 60738
Number of extensions: 2036139
Number of successful extensions: 6169
Number of sequences better than 1.0e-05: 92
Number of HSP's better than 0.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5544
Number of HSP's gapped (non-prelim): 134
length of query: 767
length of database: 30,389,216
effective HSP length: 114
effective length of query: 653
effective length of database: 23,465,084
effective search space: 15322699852
effective search space used: 15322699852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)