ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0198.1 good Z KOG3430 Cytoskeleton Dynein light chain type 1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0198.1 61651 61454 -66
(66 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR424c [Z] KOG3430 Dynein light chain type 1 110 5e-25
Hs18087855 [Z] KOG3430 Dynein light chain type 1 84 4e-17
CE00788 [Z] KOG3430 Dynein light chain type 1 84 4e-17
7290522 [Z] KOG3430 Dynein light chain type 1 84 4e-17
Hs4505813 [Z] KOG3430 Dynein light chain type 1 82 1e-16
SPAC926.07c [Z] KOG3430 Dynein light chain type 1 79 1e-15
At4g15930 [Z] KOG3430 Dynein light chain type 1 77 4e-15
Hs20542486 [Z] KOG3430 Dynein light chain type 1 69 9e-13
At3g16120 [Z] KOG3430 Dynein light chain type 1 65 1e-11
At1g23220 [Z] KOG3430 Dynein light chain type 1 62 1e-10
At1g52250 [Z] KOG3430 Dynein light chain type 1 61 2e-10
At4g27360 [Z] KOG3430 Dynein light chain type 1 59 1e-09
At5g20110 [Z] KOG3430 Dynein light chain type 1 58 3e-09
CE06194 [Z] KOG3430 Dynein light chain type 1 55 2e-08
Hs5031667 [Z] KOG3430 Dynein light chain type 1 45 2e-05
7303519 [Z] KOG3430 Dynein light chain type 1 42 2e-04
ECU01g0260i [Z] KOG3430 Dynein light chain type 1 32 0.16
YBR196c [G] KOG2446 Glucose-6-phosphate isomerase 26 8.8
>YDR424c [Z] KOG3430 Dynein light chain type 1
Length = 92
Score = 110 bits (274), Expect = 5e-25
Identities = 51/66 (77%), Positives = 57/66 (86%)
Query: 1 MSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAF 60
+S +A Y+LER+IA +KKQLDV G TWHVIVGKNFGSYVTHEKG+FVYFYIGPLAF
Sbjct: 27 ISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYIGPLAF 86
Query: 61 LVFKTA 66
LVFKTA
Sbjct: 87 LVFKTA 92
>Hs18087855 [Z] KOG3430 Dynein light chain type 1
Length = 89
Score = 84.0 bits (206), Expect = 4e-17
Identities = 35/64 (54%), Positives = 48/64 (74%)
Query: 2 SSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFL 61
++ A Y +E++IAAYIKK+ D TWH IVG+NFGSYVTHE +F+YFY+G +A L
Sbjct: 25 ATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAIL 84
Query: 62 VFKT 65
+FK+
Sbjct: 85 LFKS 88
>CE00788 [Z] KOG3430 Dynein light chain type 1
Length = 89
Score = 84.0 bits (206), Expect = 4e-17
Identities = 35/64 (54%), Positives = 48/64 (74%)
Query: 2 SSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFL 61
++ A Y +E++IAAYIKK+ D TWH IVG+NFGSYVTHE +F+YFY+G +A L
Sbjct: 25 ATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAIL 84
Query: 62 VFKT 65
+FK+
Sbjct: 85 LFKS 88
>7290522 [Z] KOG3430 Dynein light chain type 1
Length = 89
Score = 84.0 bits (206), Expect = 4e-17
Identities = 35/64 (54%), Positives = 48/64 (74%)
Query: 2 SSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFL 61
++ A Y +E++IAAYIKK+ D TWH IVG+NFGSYVTHE +F+YFY+G +A L
Sbjct: 25 ATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAIL 84
Query: 62 VFKT 65
+FK+
Sbjct: 85 LFKS 88
>Hs4505813 [Z] KOG3430 Dynein light chain type 1
Length = 89
Score = 82.0 bits (201), Expect = 1e-16
Identities = 34/64 (53%), Positives = 48/64 (74%)
Query: 2 SSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFL 61
++ A Y +E++IAA+IKK+ D TWH IVG+NFGSYVTHE +F+YFY+G +A L
Sbjct: 25 ATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAIL 84
Query: 62 VFKT 65
+FK+
Sbjct: 85 LFKS 88
>SPAC926.07c [Z] KOG3430 Dynein light chain type 1
Length = 85
Score = 79.0 bits (193), Expect = 1e-15
Identities = 32/61 (52%), Positives = 47/61 (76%)
Query: 5 ATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFK 64
A + +E++IAA+IK++ D TWH IVG+NFGS+VTHE +F+YFY+G +AFL+FK
Sbjct: 24 AMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSFVTHESRHFIYFYLGTVAFLLFK 83
Query: 65 T 65
+
Sbjct: 84 S 84
>At4g15930 [Z] KOG3430 Dynein light chain type 1
Length = 103
Score = 77.0 bits (188), Expect = 4e-15
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 4 NATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVF 63
+A Y +E++IA IKK+ D G TWH IVG+NFGSYVTHE +FVYFY+ A L+F
Sbjct: 41 SAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLF 100
Query: 64 KT 65
K+
Sbjct: 101 KS 102
>Hs20542486 [Z] KOG3430 Dynein light chain type 1
Length = 98
Score = 69.3 bits (168), Expect = 9e-13
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 2 SSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFL 61
++ A Y +E + AA+IKK+ D TW I+G+NFGSY+THE +F+YFY+G +A L
Sbjct: 35 AAQALEKYNIE-DTAAHIKKEFDKKYNPTWSCIMGRNFGSYLTHETKHFIYFYLGQVAIL 93
Query: 62 VFKTA 66
+FK++
Sbjct: 94 LFKSS 98
>At3g16120 [Z] KOG3430 Dynein light chain type 1
Length = 93
Score = 65.5 bits (158), Expect = 1e-11
Identities = 28/52 (53%), Positives = 36/52 (68%)
Query: 15 IAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFKTA 66
IAA+IKK+ D G W +VG NFG + TH KG F+YF++G L FL+FK A
Sbjct: 40 IAAHIKKEFDERYGSGWQCVVGTNFGCFFTHSKGTFIYFHLGTLNFLIFKGA 91
>At1g23220 [Z] KOG3430 Dynein light chain type 1
Length = 129
Score = 62.4 bits (150), Expect = 1e-10
Identities = 30/63 (47%), Positives = 38/63 (59%)
Query: 4 NATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVF 63
NAT + +A +KK D + G WH IVG +FGSYVTH G F+YF I + L+F
Sbjct: 60 NATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKVYVLLF 119
Query: 64 KTA 66
KTA
Sbjct: 120 KTA 122
>At1g52250 [Z] KOG3430 Dynein light chain type 1
Length = 94
Score = 61.2 bits (147), Expect = 2e-10
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 13 REIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFKTA 66
+ IA +IKK+ D G W +VG NFG + TH KG F+YF + L FL+FK A
Sbjct: 38 KSIAGHIKKEFDERYGSGWQCVVGSNFGCFFTHSKGTFIYFQLETLKFLIFKGA 91
>At4g27360 [Z] KOG3430 Dynein light chain type 1
Length = 96
Score = 58.9 bits (141), Expect = 1e-09
Identities = 26/51 (50%), Positives = 35/51 (67%)
Query: 14 EIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFK 64
+IA +IKK+ D S G W IVG +FGS+VTH G F++F +G L L+FK
Sbjct: 32 QIARFIKKEFDRSYGSGWQCIVGTHFGSFVTHCSGCFIHFSVGSLTILLFK 82
>At5g20110 [Z] KOG3430 Dynein light chain type 1
Length = 209
Score = 57.8 bits (138), Expect = 3e-09
Identities = 25/53 (47%), Positives = 34/53 (63%)
Query: 13 REIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFKT 65
+ +A +KK+ D G WH IVG +FGS+VTH G F+YF + L L+FKT
Sbjct: 149 KHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLLFKT 201
>CE06194 [Z] KOG3430 Dynein light chain type 1
Length = 91
Score = 55.1 bits (131), Expect = 2e-08
Identities = 21/43 (48%), Positives = 34/43 (78%)
Query: 9 YKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFV 51
Y +++++AA++K++LD G TWHVI GK FGS V++E G+F+
Sbjct: 32 YNIDKDVAAFVKEELDKKFGATWHVICGKCFGSRVSYEMGHFI 74
>Hs5031667 [Z] KOG3430 Dynein light chain type 1
Length = 105
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 16 AAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYI-GPLAFLVFK 64
A IK+ +D G +WHV++G+ FG +THE +Y Y G LA V+K
Sbjct: 54 AKMIKETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFGGTLAVCVWK 103
>7303519 [Z] KOG3430 Dynein light chain type 1
Length = 104
Score = 41.6 bits (96), Expect = 2e-04
Identities = 25/66 (37%), Positives = 37/66 (55%), Gaps = 2/66 (3%)
Query: 1 MSSNATANYKLEREIAA-YIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVY-FYIGPL 58
+S A Y E AA IK+ +D G WHV+VG+ FG V++E +Y F+ G L
Sbjct: 37 LSITACEKYSSNYEHAAKIIKENMDKKFGIYWHVVVGEGFGFEVSYETENILYLFFAGNL 96
Query: 59 AFLVFK 64
A +++K
Sbjct: 97 AIVLWK 102
>ECU01g0260i [Z] KOG3430 Dynein light chain type 1
Length = 71
Score = 32.0 bits (71), Expect = 0.16
Identities = 15/51 (29%), Positives = 23/51 (44%)
Query: 14 EIAAYIKKQLDVSQGETWHVIVGKNFGSYVTHEKGYFVYFYIGPLAFLVFK 64
+I +K LD G+ W V G +F T E+ YF G + +F+
Sbjct: 15 KICETLKSMLDSKFGKGWCVFAGGHFAGSCTFEEKYFAQISFGVYSITIFR 65
>YBR196c [G] KOG2446 Glucose-6-phosphate isomerase
Length = 554
Score = 26.2 bits (56), Expect = 8.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 1 MSSNATANYKLEREIAAYIKKQ-LDVSQGETWHV 33
MS+N+ N+KL E+ A+ K Q + SQG+T V
Sbjct: 1 MSNNSFTNFKLATELPAWSKLQKIYESQGKTLSV 34
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,814,070
Number of Sequences: 60738
Number of extensions: 126767
Number of successful extensions: 264
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 247
Number of HSP's gapped (non-prelim): 18
length of query: 66
length of database: 30,389,216
effective HSP length: 42
effective length of query: 24
effective length of database: 27,838,220
effective search space: 668117280
effective search space used: 668117280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)