ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0208 good J KOG0122 Translation, ribosomal structure and biogenesis Translation initiation factor 3, subunit g (eIF-3g)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0208 66792 65986 -269
(269 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR429c [J] KOG0122 Translation initiation factor 3 subunit g (e... 278 6e-75
SPBC18H10.03 [J] KOG0122 Translation initiation factor 3 subunit... 169 4e-42
Hs4503517 [J] KOG0122 Translation initiation factor 3 subunit g ... 149 3e-36
7300614 [J] KOG0122 Translation initiation factor 3 subunit g (e... 121 9e-28
7290336 [J] KOG0122 Translation initiation factor 3 subunit g (e... 118 8e-27
At3g11400 [J] KOG0122 Translation initiation factor 3 subunit g ... 117 1e-26
CE02197 [J] KOG0122 Translation initiation factor 3 subunit g (e... 103 3e-22
At5g06000 [J] KOG0122 Translation initiation factor 3 subunit g ... 99 5e-21
>YDR429c [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 274
Score = 278 bits (711), Expect = 6e-75
Identities = 139/274 (50%), Positives = 184/274 (66%), Gaps = 7/274 (2%)
Query: 1 MSAIPEPRIIENDDGSKTVISFKIQDGKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGA 60
MS + IIEN DGS+++I++KI+DG KYK+TQKVKE+ V EKV+K++A R+NW KYG+
Sbjct: 1 MSEVAPEEIIENADGSRSIITYKIEDGVKYKITQKVKEVKVLEKVHKSVAERKNWHKYGS 60
Query: 61 DKGAAPGPDISTTQLGEELELDLSPNWXXXXXXXXXXXXXNSTQKVITCRICGGAHFTMH 120
+KG+ GP T +LGEE+EL LS NW + T+ + CR+CG H TM+
Sbjct: 61 EKGSPAGPSAVTARLGEEVELRLSRNWKQAEEERIQKEKASLTKTGLQCRLCGNDHMTMN 120
Query: 121 CPYKDTLGK------KPTTSAGLDPAIXXXXXXXXXXXXX-XRYVPPSLRAGARDPSSNA 173
CP+K L + T G++ A +YVPPS RAGARDPSS+A
Sbjct: 121 CPFKTILSELSALEDPATNEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDA 180
Query: 174 YQDQRERDDAKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTF 233
Y+D RERDD T+++ QVNE ADE L+ ELLFPF IPRV VV+N ETG+SRG+A+VTF
Sbjct: 181 YRDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTF 240
Query: 234 QTEEIAAQALKLLEGRGFMNFMLHAEWSKPKPKK 267
+EE+A QAL+ L+GRG+MN +L EWSKPK K+
Sbjct: 241 SSEEVAEQALRFLDGRGYMNLILRVEWSKPKVKE 274
>SPBC18H10.03 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 282
Score = 169 bits (428), Expect = 4e-42
Identities = 97/270 (35%), Positives = 148/270 (53%), Gaps = 12/270 (4%)
Query: 2 SAIPEPRIIENDDGSKTVISFKIQD-GKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGA 60
+ +P + +N DG+KT+I F+I D GKK KVT+ +++ +TE+V +A R+ WKK+G
Sbjct: 17 TGLPSIQTFDNPDGTKTMIEFRIDDNGKKVKVTRVIRKTVITERVQHAVAERKKWKKFGK 76
Query: 61 DKGAAPGPDISTTQLGEELELDLSPNWXXXXXXXXXXXXXNSTQ------KVITCRICGG 114
+ G G D TT +GE ++L L W + + V+ CR C G
Sbjct: 77 EAGKNSGVDARTTSVGENVQLRLQLGWTTTKEEEQDEAALAAAKVKAKGSSVVRCRACKG 136
Query: 115 AHFTMHCPYKDTLGKKPTTSAGLDPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNAY 174
HFT CPYK +G P LD A RY+ P LRAG+ S ++
Sbjct: 137 NHFTAQCPYKSIIG--PVDEPPLD-ASPVSSRASGALGEKGRYIAPHLRAGSGRESGDS- 192
Query: 175 QDQRERDDAKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQ 234
+RERDD+ T+R+T +++ EE L R+L FG I RV++ K+ ETGR++G A+V++
Sbjct: 193 MFKRERDDSATLRVTNLSDDTREEEL-RDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYY 251
Query: 235 TEEIAAQALKLLEGRGFMNFMLHAEWSKPK 264
+ A +A L+G G+ N +L E+SKP+
Sbjct: 252 DRDCAIKARDRLDGYGWNNLILRCEFSKPR 281
>Hs4503517 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 320
Score = 149 bits (377), Expect = 3e-36
Identities = 92/270 (34%), Positives = 146/270 (54%), Gaps = 15/270 (5%)
Query: 4 IPEPRIIENDDGSKTVISFKI-QDGKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGADK 62
+P P+ + N + KTV +KI +DGKK+K+ + + T K +K +A R+NWKK+G +
Sbjct: 53 LPPPKEVINGN-IKTVTEYKIDEDGKKFKIVRTFR--IETRKASKAVARRKNWKKFGNSE 109
Query: 63 GAAPGPDISTTQLGEELELD-LSPNWXXXXXXXXXXXXXNSTQKVITCRICGGAHFTMHC 121
PGP+++TT + +++ + ++ QK+++CRIC G H+T C
Sbjct: 110 FDPPGPNVATTTVSDDVSMTFITSKEDLNCQEEEDPMNKLKGQKIVSCRICKGDHWTTRC 169
Query: 122 PYKDTLG---KKPTTSAGL-----DPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNA 173
PYKDTLG K+ GL + +YVPPSLR GA +
Sbjct: 170 PYKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGA-SRRGES 228
Query: 174 YQDQRERDDAKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTF 233
Q R DD TIR+T ++E E L+ EL PFG I R+++ K+ TG+S+G A+++F
Sbjct: 229 MQPNRRADDNATIRVTNLSEDTRETDLQ-ELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
Query: 234 QTEEIAAQALKLLEGRGFMNFMLHAEWSKP 263
E A+A+ + G G+ + +L+ EW+KP
Sbjct: 288 HRREDRARAIAGVSGFGYDHLILNVEWAKP 317
>7300614 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 273
Score = 121 bits (304), Expect = 9e-28
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 17 KTVISFKIQD-GKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGADKGAAPGPDISTTQL 75
K V +K D GKK KV + K + V K +A RRNW K+G + PGP+ TT
Sbjct: 32 KYVTEYKFNDDGKKVKVVRTFK--IEKQIVPKAVARRRNWVKFGDSRSDKPGPNSQTTMA 89
Query: 76 GEELELDLSPNWXXXXXXXXXXXXXNSTQKVITCRICGGAHFTMHCPYKDTLGKKPTTSA 135
EE+ + + + + + CRIC G H++++CPYK T T
Sbjct: 90 SEEIFMQFIGS---KDFDQTHETQLDPGKNIAKCRICNGEHWSVNCPYKGTSMDSKTVME 146
Query: 136 GLDPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNAYQDQRERDDAKTIRLTQVNELA 195
A +YVPP ++ G S + R+RDD+ +R++ ++E
Sbjct: 147 --TKANAAAAAAISDPSKTGKYVPPFMKDGGGISGSKNWGRGRDRDDSSAVRISNLSESM 204
Query: 196 DEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQTEEIAAQALKLLEGRGFMNFM 255
E L+ EL+ G ++++ + +G +G AYV F+ + AA A+++L G G+ + +
Sbjct: 205 TETDLE-ELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLI 263
Query: 256 LHAEWSKPKP 265
L EWSKP+P
Sbjct: 264 LCVEWSKPQP 273
>7290336 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 269
Score = 118 bits (296), Expect = 8e-27
Identities = 78/261 (29%), Positives = 124/261 (46%), Gaps = 18/261 (6%)
Query: 5 PEPRIIENDDGSKTVISFKI-QDGKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGADKG 63
P +EN G K V +K +D KK KV + K + V K +A RR W K+G K
Sbjct: 24 PTTETVEN--GQKYVTEYKYNKDDKKTKVVRTYK--ISKQVVPKTVAKRRTWTKFGDSKN 79
Query: 64 AAPGPDISTTQLGEELELDLSPNWXXXXXXXXXXXXXNSTQKVITCRICGGAHFTMHCPY 123
PGP+ TT + EE+ + + + T+ + CRIC G H++++CPY
Sbjct: 80 DKPGPNSQTTMVSEEIIMQFLNS---KEDEKANDPLLDPTKNIAKCRICNGEHWSVNCPY 136
Query: 124 KDTLGKKPTTSAGLDPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNAYQDQRERDDA 183
K T + ++ +YVPP L+ S R RDD
Sbjct: 137 KGTA----MDTNMMEKKASAAAAAAVDAPKSGKYVPPFLK-----DSQKGALGMRGRDDT 187
Query: 184 KTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQTEEIAAQAL 243
IR++ ++E E L+ EL+ G ++++ ++ TG +G AYV F+ + AA A+
Sbjct: 188 AAIRISNLSESMTEADLE-ELVKKIGPQSKMYLARDKNTGLCKGFAYVHFKQRKDAAAAI 246
Query: 244 KLLEGRGFMNFMLHAEWSKPK 264
++L G G+ + +L EWSKP+
Sbjct: 247 EILNGHGYDHLILSVEWSKPQ 267
>At3g11400 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 294
Score = 117 bits (294), Expect = 1e-26
Identities = 84/269 (31%), Positives = 123/269 (45%), Gaps = 12/269 (4%)
Query: 5 PEPRIIENDDGSKTVISFKIQDGK-KYKVTQKVK-EITVTEKVNKNIALRRNWKKYGADK 62
P+ I +++G KT I +K D + K K+T + + + ++NK RRNW K+G
Sbjct: 29 PKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAA 88
Query: 63 GAAPGPDISTTQLGEEL-ELDLSPNWXXXXXXXXXXXXXNSTQK---VITCRICG--GAH 116
G ++ E L E +P + ++ CRIC G H
Sbjct: 89 NEEAGSHLTMVSTEEILLERPRAPGTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDH 148
Query: 117 FTMHCPYKDTLGKKPTTSAGLDPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNAYQD 176
+T CPYKD L P YVPPS+RAGA S D
Sbjct: 149 WTSKCPYKD-LAAPTDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGA--DRSAVGSD 205
Query: 177 QRERDDAKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQTE 236
R R+D ++R+T ++E E L EL PFG + RV+V + +TG SRG +V F +
Sbjct: 206 MRRRNDENSVRVTNLSEDTREPDLM-ELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSR 264
Query: 237 EIAAQALKLLEGRGFMNFMLHAEWSKPKP 265
E A +A+ L G G+ N +L EW+ P+P
Sbjct: 265 EDAQRAINKLNGYGYDNLILRVEWATPRP 293
>CE02197 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 256
Score = 103 bits (257), Expect = 3e-22
Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 30/261 (11%)
Query: 7 PRIIENDDGSKTVISFKIQDGKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGADKGAAP 66
P I E DG++T +F DG ++KV + K + ++V K +A R+ W K+G+ KG
Sbjct: 20 PHIQEGADGTRTETAFTEVDGVRWKVVTQFK--VINKRVPKVVADRKKWVKFGSCKGEPA 77
Query: 67 GPDISTTQLGEELELDLSPNWXXXXXXXXXXXXXNSTQKVIT---CRIC-GGAHFTMHCP 122
GP ++TT + EE+++ + N T K + CR C G H++ HCP
Sbjct: 78 GPQVATTYVAEEVDMQFTRN--RAGEQILDVQEDKQTAKTTSREHCRHCKGNDHWSTHCP 135
Query: 123 YKDTLGKKPTTSAGLDPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNAYQDQRERDD 182
YK A D + G R + Q R R D
Sbjct: 136 YKVMYQLDEEADADKDTE------------------KDRMAMGMR---PDGRQIDRNRSD 174
Query: 183 AKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQTEEIAAQA 242
T R+T + + +E+ L R+L G + R+F+ ++ TG +G A+VTF++ + AA+A
Sbjct: 175 ENTCRVTNLPQEMNEDEL-RDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233
Query: 243 LKLLEGRGFMNFMLHAEWSKP 263
+ L + +L EW++P
Sbjct: 234 IAELNDIRMYHMVLKVEWTRP 254
>At5g06000 [J] KOG0122 Translation initiation factor 3 subunit g (eIF-3g)
Length = 308
Score = 99.4 bits (246), Expect = 5e-21
Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 20/268 (7%)
Query: 5 PEPRIIENDDGSKTVISFKI-QDGKKYKVTQKVKEITVTEKVNKNIALRRNWKKYGADKG 63
P+ I + +G K VI +K ++ KK K+T + + K RR+W K+G D
Sbjct: 30 PKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTR--VQKRALTKQAVERRSWNKFG-DAA 86
Query: 64 AAPGPDISTTQLGEELELDL-----SPNWXXXXXXXXXXXXXNSTQKVITCRICG--GAH 116
T + E++ L+ S ++ CR+C G H
Sbjct: 87 HEESSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSMSQLGKPGAVLMVCRLCQKKGDH 146
Query: 117 FTMHCPYKDTLGKKPTTSAGLDPAIXXXXXXXXXXXXXXRYVPPSLRAGARDPSSNAYQD 176
+T CP KD L +P YVPPS+R GA + + D
Sbjct: 147 WTSRCPQKDLLSLMD------EPLTAETSTSTITGTGRAAYVPPSMREGADRKAGGS--D 198
Query: 177 QRERDDAKTIRLTQVNELADEEVLKRELLFPFGEIPRVFVVKNPETGRSRGVAYVTFQTE 236
R R D ++R+T ++E L EL PFG + R V + +T SRG +V+F +
Sbjct: 199 MRSRHDENSVRVTNLSEDTRGPDLM-ELFRPFGAVTRCHVAIDQKTSMSRGFGFVSFVSR 257
Query: 237 EIAAQALKLLEGRGFMNFMLHAEWSKPK 264
E A +A+ L G G+ N +L EWS PK
Sbjct: 258 EDAQRAINKLNGYGYDNLILRVEWSTPK 285
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,732,259
Number of Sequences: 60738
Number of extensions: 578815
Number of successful extensions: 1681
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1649
Number of HSP's gapped (non-prelim): 9
length of query: 269
length of database: 30,389,216
effective HSP length: 105
effective length of query: 164
effective length of database: 24,011,726
effective search space: 3937923064
effective search space used: 3937923064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)