ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0227 good U KOG1691 Intracellular trafficking, secretion, and vesicular transport emp24/gp25L/p24 family of membrane trafficking proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0227 73166 72531 -212
(212 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YML012w [U] KOG1691 emp24/gp25L/p24 family of membrane trafficki... 299 2e-81
SPAC23H4.03c [U] KOG1691 emp24/gp25L/p24 family of membrane traf... 162 4e-40
Hs5803201 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 123 2e-28
CE05883 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficki... 110 1e-24
7301252 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficki... 104 8e-23
CE24533 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficki... 83 2e-16
Hs14723535 [U] KOG1690 emp24/gp25L/p24 family of membrane traffi... 80 3e-15
Hs20541596 [U] KOG1690 emp24/gp25L/p24 family of membrane traffi... 75 5e-14
At1g09580 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 75 9e-14
At1g57620 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 74 1e-13
At1g21900 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 71 1e-12
At3g10780 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 69 4e-12
Hs14744678 [U] KOG1691 emp24/gp25L/p24 family of membrane traffi... 69 6e-12
At1g26690 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 67 2e-11
At3g29070 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 64 2e-10
At1g69460 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 63 3e-10
At1g14010 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 59 4e-09
At3g22845 [U] KOG1692 Putative cargo transport protein EMP24 (p2... 59 5e-09
At2g03290 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 53 3e-07
YHR110w [U] KOG1690 emp24/gp25L/p24 family of membrane trafficki... 50 3e-06
>YML012w [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 211
Score = 299 bits (766), Expect = 2e-81
Identities = 146/194 (75%), Positives = 163/194 (83%)
Query: 19 VFAVRFDIPASTKPEQVCIRDFVSEGQLVLIDIETDGSVGDGQQLNLYVRDSNGNEYRRN 78
V + FDI AST PEQVCIRDFV+EGQLV+ DI +DGSVGDGQ+LNL+VRDS GNEYRR
Sbjct: 18 VQGLHFDIAASTDPEQVCIRDFVTEGQLVVADIHSDGSVGDGQKLNLFVRDSVGNEYRRK 77
Query: 79 RDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKL 138
RD AG+VRV FTAP ST+FDVCFEN AQ GRSLSR+IELDIESG+EARDWNKI A+EKL
Sbjct: 78 RDFAGDVRVAFTAPSSTAFDVCFENQAQYRGRSLSRAIELDIESGAEARDWNKISANEKL 137
Query: 139 KPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQ 198
KP+EVELRR+EE+TDEIVDE YLK REERLRDTNESTNRRVRNFS G WQ
Sbjct: 138 KPIEVELRRVEEITDEIVDELTYLKNREERLRDTNESTNRRVRNFSILVIIVLSSLGVWQ 197
Query: 199 VNYMKNFFRAKHII 212
VNY+KN+F+ KHII
Sbjct: 198 VNYLKNYFKTKHII 211
>SPAC23H4.03c [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 216
Score = 162 bits (409), Expect = 4e-40
Identities = 75/197 (38%), Positives = 121/197 (61%), Gaps = 3/197 (1%)
Query: 19 VFAVRFDIPASTKPEQVCIRDFVSEGQLVLIDIETDGSVGDGQQLNLYVRDSNGNEYRRN 78
V A+ FDIPA T PE C+R++V E LV+++++T G++GDGQ L++ + DS+GN +
Sbjct: 19 VHALNFDIPAKTNPEPFCLREYVGEKNLVIVNLKTTGNMGDGQTLSMMITDSSGNTHSSI 78
Query: 79 RDIAGEVRVVFTAPQSTSFDVCFENV---AQVNGRSLSRSIELDIESGSEARDWNKIQAS 135
+++ GE V F S D+CF N + RS++L+ G++A D++ +Q +
Sbjct: 79 QNVLGEKSVAFDVDASAMLDICFLNTLTPGAIESEHKKRSVKLEFTVGADADDYSSLQKA 138
Query: 136 EKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXG 195
L+PVE ++RR + +EI + YL+ RE R R+TNESTN RV+NF+
Sbjct: 139 NNLEPVEADIRRARDFIEEIKGKIYYLQAREARFRNTNESTNERVKNFAYLTFISLFVLV 198
Query: 196 AWQVNYMKNFFRAKHII 212
WQ+ Y+++FF+ KH+I
Sbjct: 199 IWQILYLRSFFQRKHLI 215
>Hs5803201 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 219
Score = 123 bits (308), Expect = 2e-28
Identities = 73/196 (37%), Positives = 112/196 (56%), Gaps = 8/196 (4%)
Query: 19 VFAVRFDIPASTKPEQVCIRDFVSEGQLVL--IDIETDGSVGDGQQLNLYVRDSNGNEYR 76
V A+ F +P +++ C+R+ + + LV +I G + +L + DS G+
Sbjct: 29 VLAISFHLPINSRK---CLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILY 85
Query: 77 RNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASE 136
D A + + FT F+VCFE+ GR + + LD++ G EA+++ +I E
Sbjct: 86 SKED-ATKGKFAFTTEDYDMFEVCFESKG--TGRIPDQLVILDMKHGVEAKNYEEIAKVE 142
Query: 137 KLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGA 196
KLKP+EVELRR+E+L++ IV++F Y+K REE +RDTNESTN RV FS
Sbjct: 143 KLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLAT 202
Query: 197 WQVNYMKNFFRAKHII 212
WQV Y++ FF+AK +I
Sbjct: 203 WQVFYLRRFFKAKKLI 218
>CE05883 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 204
Score = 110 bits (276), Expect = 1e-24
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 21 AVRFDIPASTKPEQVCIRDFVSEGQLVLIDIETDGSVGDGQQLNLYVRDSNGNE-YRRNR 79
++RF +P E+ C+++ + + V++ E + S G +++V D+ G+ Y+R
Sbjct: 16 SLRFYVPPK---EKKCLKEEIHKN--VVVTGEYEFSQGIQYTGSIHVTDTRGHTLYKREN 70
Query: 80 DIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLK 139
+ + FTA + F++C EN R + L ++ G EA++++ I +EKLK
Sbjct: 71 FADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDDIAKAEKLK 130
Query: 140 PVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQV 199
P+EVELRR+E++ D I +F +++ REE +R+TNESTN RV S WQV
Sbjct: 131 PLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLCLLGLAIWQV 190
Query: 200 NYMKNFFRAKHII 212
+++N+F++K +I
Sbjct: 191 LFLRNYFKSKKLI 203
>7301252 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 195
Score = 104 bits (260), Expect = 8e-23
Identities = 61/192 (31%), Positives = 105/192 (53%), Gaps = 6/192 (3%)
Query: 21 AVRFDIPASTKPEQVCIRDFVSEGQLVLIDIETDGSVGDGQQLNLYVRDSNGNEYRRNRD 80
AV F + +T Q C+++ + QLV+ + E S GQ ++ RD+ G+ +
Sbjct: 9 AVMFKLSPNT---QKCLKEDIQANQLVMGEFEV--SDVPGQIIDYIARDTKGHILSQKEH 63
Query: 81 IAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKP 140
I + + F + ++++CF + + R + + + L + G E + + I + KLKP
Sbjct: 64 IT-KGKFSFMSEVYDTYEICFISKVPAHQRGVIQEVSLLTKKGVETKSYEGIGEASKLKP 122
Query: 141 VEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVN 200
+EV+L+R+E+L+D IV +F ++ REE +RDTNE TN RV FS WQV
Sbjct: 123 LEVDLKRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLLGLATWQVL 182
Query: 201 YMKNFFRAKHII 212
Y++ +F+AK +I
Sbjct: 183 YLRRYFKAKKLI 194
>CE24533 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 211
Score = 83.2 bits (204), Expect = 2e-16
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 84 EVRVVFTAPQSTSFDVCF--ENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPV 141
E R FT+ +C + A NG L + LDI++G A+D+ +I +KL +
Sbjct: 83 EGRFTFTSNTPGEHVICIYSNSTAWFNGAQLR--VHLDIQAGDHAQDYAQIAQKDKLNEL 140
Query: 142 EVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNY 201
++ +R++ + D+I E NY + REER R T+ESTN RV +S GAWQ+ +
Sbjct: 141 QLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVLAITGAWQMRH 200
Query: 202 MKNFFRAKHII 212
++ FF AK ++
Sbjct: 201 LRGFFEAKKLV 211
>Hs14723535 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 214
Score = 79.7 bits (195), Expect = 3e-15
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 79 RDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSR------SIELDIESGSEARDWNKI 132
R E R FT+ +C + N S + LDI+ G A D+ +I
Sbjct: 79 RQYGSEGRFTFTSHTPGEHQICLHS----NSTKFSLFAGGMLRVHLDIQVGEHANDYAEI 134
Query: 133 QASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXX 192
A +KL +++ +R++ E ++I E NY + REER R T+ESTN+RV +S
Sbjct: 135 AAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILV 194
Query: 193 XXGAWQVNYMKNFFRAKHII 212
G WQ+ ++K+FF AK ++
Sbjct: 195 AIGVWQMRHLKSFFEAKKLV 214
>Hs20541596 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 227
Score = 75.5 bits (184), Expect = 5e-14
Identities = 47/157 (29%), Positives = 82/157 (51%), Gaps = 7/157 (4%)
Query: 60 GQQLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQSTSFDVCFEN----VAQVNGRSLSRS 115
G +++ V+D +G +R E R FT+ +C + +A G L
Sbjct: 74 GLGMHVEVKDPDGKVVL-SRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLR-- 130
Query: 116 IELDIESGSEARDWNKIQASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNES 175
+ LDI+ G A ++ +I A +KL +++ R++ + ++I E +Y + REER R T+ES
Sbjct: 131 VHLDIQVGEHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSES 190
Query: 176 TNRRVRNFSXXXXXXXXXXGAWQVNYMKNFFRAKHII 212
TN+RV +S G WQ+ ++K+FF AK ++
Sbjct: 191 TNQRVLWWSIAQTVILILTGIWQMRHLKSFFEAKKLV 227
>At1g09580 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 217
Score = 74.7 bits (182), Expect = 9e-14
Identities = 56/196 (28%), Positives = 93/196 (46%), Gaps = 12/196 (6%)
Query: 21 AVRFDIPAS-TKPEQVCIRDFVSEGQLVLID---IETDGSVGDGQQLNLYVRDSNGNEYR 76
AV D+P + TK C+ + + +VL D I D V +++ V GN
Sbjct: 30 AVWLDVPPTGTK----CVSEEIQSNVVVLADYLIISEDHEVMP--TISVKVTSPYGNNLH 83
Query: 77 RNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASE 136
++ + FT +S ++ CF + +G + SI +D +G A+DW I E
Sbjct: 84 NMENVT-HGQFAFTTQESGNYLACFWADEKSHGNK-NVSINIDWRTGIAAKDWASIAKKE 141
Query: 137 KLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGA 196
K++ VE+E+R++E + I + YL+ RE +R +E TN RV +S
Sbjct: 142 KIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWYSIMSLGVCIAVSG 201
Query: 197 WQVNYMKNFFRAKHII 212
+QV Y+K +F K +I
Sbjct: 202 FQVLYLKQYFEKKKLI 217
>At1g57620 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 212
Score = 74.3 bits (181), Expect = 1e-13
Identities = 40/124 (32%), Positives = 66/124 (52%), Gaps = 1/124 (0%)
Query: 89 FTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVELRRI 148
FT +S ++ CFE A+ +G SI +D ++G A+DW+ I EK++ VE+E +++
Sbjct: 90 FTTQESGTYLACFEADAKSHGNK-DFSINIDWKTGIAAKDWDSIARKEKIEGVELEFKKL 148
Query: 149 EELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMKNFFRA 208
E + I + YL+ RE +R +E TN RV +S Q+ Y+K +F
Sbjct: 149 EGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYSIMSLGICIVVSGLQILYLKQYFEK 208
Query: 209 KHII 212
K +I
Sbjct: 209 KKLI 212
>At1g21900 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 216
Score = 70.9 bits (172), Expect = 1e-12
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 36 CIRDFVSEGQLVLID--IETDGSVGDGQQLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQ 93
C+ + + +VL D + + + + ++ V GN ++ + FT +
Sbjct: 40 CVSEEIQSNVVVLADYYVVDEHNPENTPAVSSKVTSPYGNNLHHQENVT-HGQFAFTTQE 98
Query: 94 STSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVELRRIEELTD 153
+ ++ CF + + + ++ +D + G A+DW+ + EK++ VE++LRR+E L
Sbjct: 99 AGNYLACFW-IDSSHHLANPITLGVDWKMGIAAKDWDSVAKKEKIEGVELQLRRLEGLVL 157
Query: 154 EIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMKNFFRAKHII 212
I + NY+K RE +R+ +E+TN RV FS Q+ Y+K +F K +I
Sbjct: 158 SIRENLNYIKDREAEMREVSETTNSRVAWFSIMSLGVCVVVVGSQILYLKRYFHKKKLI 216
>At3g10780 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 217
Score = 69.3 bits (168), Expect = 4e-12
Identities = 51/189 (26%), Positives = 85/189 (43%), Gaps = 7/189 (3%)
Query: 30 TKPE--QVCIRDFVSEGQLVLIDIET--DGSVGDGQQLNLYVRDSNGNEYRRNRDIAGEV 85
T PE + C+ + + +V++D D G L++ V G E + ++
Sbjct: 30 TVPESGERCVYEEIQANVVVVLDYICIDDAFTQLGPTLDVRVTSPYGKELYKIANVT-HG 88
Query: 86 RVVFTAPQSTSFDVCFENVAQVNGRSLSRSI--ELDIESGSEARDWNKIQASEKLKPVEV 143
+ FT +S +F C + S++ S+ LD + G A+DW+ + EK++ +E+
Sbjct: 89 QAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRAKDWDSVAKKEKIEAMEL 148
Query: 144 ELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMK 203
E+RR E I YL+ RE +R+ NE TN RV QV Y+K
Sbjct: 149 EIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLMSLGVAIVVSISQVLYLK 208
Query: 204 NFFRAKHII 212
+F K +I
Sbjct: 209 RYFLKKKLI 217
>Hs14744678 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 199
Score = 68.6 bits (166), Expect = 6e-12
Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 36 CIRDFVSEGQLVLIDIE-TDGSVGDGQQLN-LYVRDSNGNEYRRNRDIAGEVRVVFTAPQ 93
C + + + LV E +D S G G + L + DS G+ + ++ + + FT
Sbjct: 43 CFHEEIHKDLLVTGTYEISDQSGGTGGLCSHLKITDSAGHIFYSKKNTT-KGKFAFTTED 101
Query: 94 STSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVELRRIEELTD 153
F+VCFE+ + G+ + + LD++ G E +++ +I EKLKP+EV+LR +E+L++
Sbjct: 102 YDMFEVCFES--KETGQIPDQLVILDMKHGVEVKNYREIAKVEKLKPLEVKLRHLEDLSE 159
Query: 154 EIVDEFNYLKGREERL 169
IV++F Y+K REE +
Sbjct: 160 SIVNDFAYMKKREEEM 175
>At1g26690 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 169
Score = 66.6 bits (161), Expect = 2e-11
Identities = 37/151 (24%), Positives = 76/151 (49%), Gaps = 3/151 (1%)
Query: 62 QLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIE 121
++++ V S GN Y D+ + FTA +S + C+ V + ++ SI+ D
Sbjct: 22 KISIRVTSSYGNTYHHAEDVESG-QFAFTAVESGDYMACYTAVD--HKPEVTLSIDFDWR 78
Query: 122 SGSEARDWNKIQASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVR 181
+G +++ W+ + +++ +E +++R+ E + I +E YL+ REE +++ N +TN ++
Sbjct: 79 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 138
Query: 182 NFSXXXXXXXXXXGAWQVNYMKNFFRAKHII 212
S Q ++K FF K +I
Sbjct: 139 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 169
>At3g29070 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 204
Score = 63.5 bits (153), Expect = 2e-10
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 36 CIRD-----FVSEGQLVLIDIETDGSVGDGQQLNLYVRDSNGNEYRRNRDIAGEVRVVFT 90
CI D +++ G +++ + +L + V G + ++ + VFT
Sbjct: 26 CISDDIKTNYMTVGTYSIVNPNEGHHLPPSHKLFVTVSSPKGKSHHHAENVESG-KFVFT 84
Query: 91 APQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVELRRIEE 150
A ++ + CF VA + +++ + +SG EA+DW I ++ +EVE+R++ +
Sbjct: 85 AEETGDYMTCF--VAPGYRPTAKFAVDFEWKSGVEAKDWTTIAKRGQITMLEVEVRKLLD 142
Query: 151 LTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMKNFFRAKH 210
+T+ I +E L RE +++ N STN R+ S Q+ ++K+F K
Sbjct: 143 VTETIHEEMFQLIEREREMQELNRSTNSRMAALSLLSFVVTMSVAGLQLRHLKSFLERKK 202
Query: 211 II 212
++
Sbjct: 203 LL 204
>At1g69460 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 204
Score = 62.8 bits (151), Expect = 3e-10
Identities = 35/151 (23%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 62 QLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIE 121
++++ V ++GN Y + + F+A ++ + CF V + +S SI+ + +
Sbjct: 57 KISVKVTSNSGNNYHHAEQVDSG-QFAFSAVEAGDYMACFTAVD--HKPEVSLSIDFEWK 113
Query: 122 SGSEARDWNKIQASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVR 181
+G +++ W + +++ +E E++ + + + I +E YL+ REE ++D N STN ++
Sbjct: 114 TGVQSKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNTKMA 173
Query: 182 NFSXXXXXXXXXXGAWQVNYMKNFFRAKHII 212
S Q ++K FF K +I
Sbjct: 174 WLSVLSFFVCIGVAGMQFLHLKTFFEKKKVI 204
>At1g14010 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 212
Score = 59.3 bits (142), Expect = 4e-09
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 44 GQLVLIDIETDGSVGDGQQLNLYVRDSNGNEYRRNRDIAGEVRVVFTAPQSTSFDVCFEN 103
G+ +I+ D + ++ + V G Y + + + F A ++ + CF
Sbjct: 47 GKYSIINPHEDHPLPSSHKVTVRVTSPQGTAYHESDGVESG-QFSFVAVETGDYISCFSA 105
Query: 104 VAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVELRRIEELTDEIVDEFNYLK 163
V +L I+ D +G +DW+ + +++ +E E++++ E + I DE YL+
Sbjct: 106 VDHKPETTLI--IDFDWRTGIHTKDWSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLR 163
Query: 164 GREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMKNFFRAKHII 212
REE + + N +TN ++ S Q ++K FF+ K +I
Sbjct: 164 DREEEMHNLNIATNSKMAWLSFVSLAVCLSVAGLQFWHLKTFFQKKKLI 212
>At3g22845 [U] KOG1692 Putative cargo transport protein EMP24 (p24 protein
family)
Length = 214
Score = 58.9 bits (141), Expect = 5e-09
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 30 TKPEQVCIRDFVS------EGQLVLIDIETDGSVGDGQQLNLYVRDSNGNEYRRNRDIAG 83
T ++ C++++V G V++D + D L+ V GN + + +G
Sbjct: 31 TVNDEECVQEYVLYEGDTVSGNFVVVDHDIFWG-SDHPGLDFTVTSPAGNIVQTLKGTSG 89
Query: 84 EVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEV 143
+ + F AP+S + CF N S ++ I G + + + E L PV V
Sbjct: 90 D-KFEFKAPKSGMYKFCFHNPY-----STPETVSFYIHVGHIPNE-HDLAKDEHLDPVNV 142
Query: 144 ELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMK 203
++ + E + +V E YLK R+ R R TNEST +RV ++ QV Y++
Sbjct: 143 KIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIR 202
Query: 204 NFF 206
F
Sbjct: 203 KLF 205
>At2g03290 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 213
Score = 52.8 bits (125), Expect = 3e-07
Identities = 42/202 (20%), Positives = 95/202 (46%), Gaps = 14/202 (6%)
Query: 18 QVFAVRFDIPASTKPEQVCIRDFVSE-----GQLVLIDIETDGS-VGDGQQLNLYVRDSN 71
+ ++R+++ +S + CI + + E G+ +++ D + D ++ + V
Sbjct: 19 RTLSMRYELKSS---KTKCIGEEIHENAMSIGKYFIVNPNEDNHPLPDSHKIIVKVMPPQ 75
Query: 72 G-NEYRRNRDIAGEVRVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWN 130
G N + ++ AG+ FTA ++ S+ C + +L+ I+ D ++G +++W
Sbjct: 76 GKNLHEADKVEAGQFS--FTAYENGSYVACITAIDYKPETTLT--IDFDWKTGVHSKEWT 131
Query: 131 KIQASEKLKPVEVELRRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXX 190
+ ++ +E +++ + + I +E YL+ REE +++ N STN ++ S
Sbjct: 132 NVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLREREEEMQELNRSTNSKMAWLSFGSLVV 191
Query: 191 XXXXGAWQVNYMKNFFRAKHII 212
Q ++K FF K +I
Sbjct: 192 CLSVAGLQFWHLKTFFEKKKLI 213
>YHR110w [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 212
Score = 49.7 bits (117), Expect = 3e-06
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 33 EQVCIRDFVSEGQLVLID----IETDGSVGDGQQ--LNLYVRDSNGNEYR-RNRDIAGEV 85
E C + +S G L++ D +E DG + + L + V ++ N++R N+ +
Sbjct: 30 ETKCFYEHLSRGNLLIGDLDLYVEKDGLFEEDPESSLTITVDETFDNDHRVLNQKNSHTG 89
Query: 86 RVVFTAPQSTSFDVCFENVAQVNGRSLSRSIELDIESGSEARDWNKIQASEKLKPVEVEL 145
V FTA + CF +L IEL+I EA D K E + ++ +
Sbjct: 90 DVTFTALDTGEHRFCFTPFYSKKSATLRVFIELEI-GNVEALDSKK---KEDMNSLKGRV 145
Query: 146 RRIEELTDEIVDEFNYLKGREERLRDTNESTNRRVRNFSXXXXXXXXXXGAWQVNYMKNF 205
++ + I E + ++ +E R+ +ES N ++ +S A+Q+ Y+KNF
Sbjct: 146 GQLTQRLSSIRKEQDAIREKEAEFRNQSESANSKIMTWSVFQLLILLGTCAFQLRYLKNF 205
Query: 206 FRAKHII 212
F + ++
Sbjct: 206 FVKQKVV 212
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,809,385
Number of Sequences: 60738
Number of extensions: 428497
Number of successful extensions: 1458
Number of sequences better than 1.0e-05: 20
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1436
Number of HSP's gapped (non-prelim): 20
length of query: 212
length of database: 30,389,216
effective HSP length: 102
effective length of query: 110
effective length of database: 24,193,940
effective search space: 2661333400
effective search space used: 2661333400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)