ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0338 good C KOG1231 Energy production and conversion Proteins containing the FAD binding domain
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0338 114489 112774 -572
(572 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL174c [C] KOG1231 Proteins containing the FAD binding domain 468 e-132
At5g06580 [C] KOG1231 Proteins containing the FAD binding domain 313 6e-85
CE23698_3 [C] KOG1231 Proteins containing the FAD binding domain 274 2e-73
7290268 [C] KOG1232 Proteins containing the FAD binding domain 147 4e-35
YDL178w [C] KOG1232 Proteins containing the FAD binding domain 142 1e-33
YEL071w [C] KOG1232 Proteins containing the FAD binding domain 141 3e-33
At4g36400 [C] KOG1232 Proteins containing the FAD binding domain 140 4e-33
CE26814 [C] KOG1232 Proteins containing the FAD binding domain 138 3e-32
SPBC713.03 [C] KOG1232 Proteins containing the FAD binding domain 133 8e-31
Hs4501993 [R] KOG1233 Alkyl-dihydroxyacetonephosphate synthase 110 4e-24
7303115 [R] KOG1233 Alkyl-dihydroxyacetonephosphate synthase 96 1e-19
CE26144 [R] KOG1233 Alkyl-dihydroxyacetonephosphate synthase 83 1e-15
Hs20561789 [C] KOG1231 Proteins containing the FAD binding domain 68 4e-11
>YDL174c [C] KOG1231 Proteins containing the FAD binding domain
Length = 587
Score = 468 bits (1205), Expect = e-132
Identities = 250/510 (49%), Positives = 338/510 (66%), Gaps = 13/510 (2%)
Query: 71 KQVFPLQSTTPLTALDPPRYGSDE-DLKLCIKEIIQTIGS--DNVKNTEAELDHHTDNGF 127
K++ P+ ST L++LD P Y D + ++++ Q +G+ +N + +++LD H+D F
Sbjct: 81 KKIDPVNSTLKLSSLDSPDYLHDPVKIDKVVEDLKQVLGNKPENYSDAKSDLDAHSDTYF 140
Query: 128 NPTKPQPHQKPRWIVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPG--IV 185
N P P Q+PR I++ +TE+VS ++KI + N+PVVPFSGGTSLEGH TR G I
Sbjct: 141 NTHHPSPEQRPRIILFPHTTEEVSKILKICHDNNMPVVPFSGGTSLEGHFLPTRIGDTIT 200
Query: 186 LNTSK-MNKILAVHHKDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGCDCGPGAHVCGMV 244
++ SK MN ++ DLD +QAG+ W+ LN+YL+ +M GCD GPGA + G +
Sbjct: 201 VDLSKFMNNVVKFDKLDLDITVQAGLPWEDLNDYLSD----HGLMFGCDPGPGAQIGGCI 256
Query: 245 NTNASGIGATRYGSMGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGI 304
+ SG A RYG+M NII++T+VL DGT+VKTKKRPRKSSAGYNL GLFVGSEGTLGI
Sbjct: 257 ANSCSGTNAYRYGTMKENIINMTIVLPDGTIVKTKKRPRKSSAGYNLNGLFVGSEGTLGI 316
Query: 305 VTEVTVKLQVRPPYETVAVVQFPTLKDSTNTVAELFQKGIQLNAVELLDSSMMKCINYSN 364
VTE TVK V+P ETVAVV F T+KD+ + L Q GI LNA+ELLD +MMK IN S
Sbjct: 317 VTEATVKCHVKPKAETVAVVSFDTIKDAAACASNLTQSGIHLNAMELLDENMMKLINASE 376
Query: 365 LVSK-KYDNVPTLFFKISGLNKTVVQEYVKQVKQISQDNHCSKFEFAKNEQEAEELFSTR 423
+ + PT+FFKI G + +V V +VK ++Q NHC+ F+FAK++ E EL+ R
Sbjct: 377 STDRCDWVEKPTMFFKIGGRSPNIVNALVDEVKAVAQLNHCNSFQFAKDDDEKLELWEAR 436
Query: 424 KNALYLMLDYAFNEIDENAKMWITDCAVPLSNLAATLEELDKITATYPLTHMTLGHVGDG 483
K AL+ +LD A D++AK+W TD AVP+S + E K L + +GH GDG
Sbjct: 437 KVALWSVLD-ADKSKDKSAKIWTTDVAVPVSQFDKVIHETKKDMQASKLINAIVGHAGDG 495
Query: 484 NIHYDIFYE-PDQFEICKQLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVDL 542
N H I Y P++ E C QLV + L EGTC+GEHG+G GKR++L +ELG VDL
Sbjct: 496 NFHAFIVYRTPEEHETCSQLVDRMVKRALNAEGTCTGEHGVGIGKREYLLEELGEAPVDL 555
Query: 543 MRKVKLAIDPKRLLNPDKVLKIDPLDPSNE 572
MRK+KLAIDPKR++NPDK+ K DP +P+N+
Sbjct: 556 MRKIKLAIDPKRIMNPDKIFKTDPNEPAND 585
>At5g06580 [C] KOG1231 Proteins containing the FAD binding domain
Length = 417
Score = 313 bits (801), Expect = 6e-85
Identities = 168/420 (40%), Positives = 252/420 (60%), Gaps = 15/420 (3%)
Query: 146 STEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHHKDLDAV 205
S E+VS ++K N+Y +P+VP+ G TS+EGHT + + G+ ++ S M ++ A+H +D+D +
Sbjct: 4 SEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKRVKALHVEDMDVI 63
Query: 206 LQAGVGWQQLNEYLASVPEYKNMMLGCDCGPGAHVCGMVNTNASGIGATRYGSMGANIIS 265
++ G+GW +LNEYL E + D GPGA + GM T SG A RYG+M N+IS
Sbjct: 64 VEPGIGWLELNEYL----EEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVIS 119
Query: 266 ITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQVRPPYETVAVVQ 325
+ VVL +G VVKT R RKS+AGY+LT L +GSEGTLG++TE+T++LQ P + VAV
Sbjct: 120 LKVVLPNGDVVKTASRARKSAAGYDLTRLIIGSEGTLGVITEITLRLQKIPQHSVVAVCN 179
Query: 326 FPTLKDSTNTVAELFQKGIQLNAVELLDSSMMKCINYSNLVSKKYDNVPTLFFKISGLNK 385
FPT+KD+ + GIQ++ VELLD ++ IN +N K PTL F+ G +
Sbjct: 180 FPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMAN--GKNLTEAPTLMFEFIG-TE 236
Query: 386 TVVQEYVKQVKQISQDNHCSKFEFAKNEQEAEELFSTRKNALYLMLDYAFNEIDENAKMW 445
+E + V+QI+ ++ S F FA+ + +EL+ RK AL +A + +
Sbjct: 237 AYTREQTQIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEAL-----WACYAMAPGHEAM 291
Query: 446 ITDCAVPLSNLAATLEELDKITATYPLTHMTLGHVGDGNIHYDIFYEP---DQFEICKQL 502
ITD VPLS+LA + K L + H GDGN H I ++P +Q ++L
Sbjct: 292 ITDVCVPLSHLAELISRSKKELDASSLLCTVIAHAGDGNFHTCIMFDPSSEEQRREAERL 351
Query: 503 VAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVDLMRKVKLAIDPKRLLNPDKVL 562
+ L +GTC+GEHG+GTGK K+LE ELG + + M+++K +DP ++NP K++
Sbjct: 352 NHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKRIKKTLDPNDIMNPGKLI 411
>CE23698_3 [C] KOG1231 Proteins containing the FAD binding domain
Length = 454
Score = 274 bits (701), Expect = 2e-73
Identities = 166/432 (38%), Positives = 242/432 (55%), Gaps = 19/432 (4%)
Query: 138 PRWIVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAV 197
P ++ T+ E VS ++K+ N IPVVPF GT LEG + ST GI ++T ++ +
Sbjct: 32 PAVVLEPTNVEQVSEILKLCNDRAIPVVPFGTGTGLEGGSMSTLGGICISTQQIIGDPVL 91
Query: 198 HHKDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGCDCGPGAHVCGMVNTNASGIGATRYG 257
+D ++ LN+ + + + D G A VCGMV T+ASG A RYG
Sbjct: 92 REQDFVCSVKPSTTRIALNDAIKN----SGLFFPVDPGADASVCGMVATSASGTNAIRYG 147
Query: 258 SMGANIISITVVLADGTVVKTKKR---PRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQV 314
+M N++++ VVLADGT++ TK + PRKSSAG+N T LFVGSEGTLGI+TE TVK+
Sbjct: 148 TMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKVHP 207
Query: 315 RPPYETVAVVQFPTLKDSTNTVAELFQKGIQLNAVELLDS-SMMKCINYSNLVSKKYDNV 373
RP + + AV FPT+ ++ +TV E+ Q I + +ELLD+ + C +YS+L ++
Sbjct: 208 RPQFLSAAVCSFPTVHEAASTVVEVLQWNIPVARIELLDTVQIQACNSYSSLNLRE---S 264
Query: 374 PTLFFKISGLNKTVVQEYVKQVKQISQDNHCSKFEFAKNEQEAEELFSTRKNALYLMLDY 433
PTLF + G N+ V + V+ I + + F+ + + L+ R NA Y L
Sbjct: 265 PTLFIEFHGSNEKEVADQTSAVEDICKSHEALDFDSGASPDKRATLWKARHNAYYAAL-- 322
Query: 434 AFNEIDENAKMWITDCAVPLSNLAATLEELDKITATYPLTHMTLGHVGDGNIHYDI-FYE 492
+ A+ + TD VP+S LA + E + + +GHVGDGN H + E
Sbjct: 323 ---AMRTGARGFTTDVCVPISKLADVISETRSDLDEHEILGTVVGHVGDGNFHVILPTIE 379
Query: 493 PDQFEICK--QLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVDLMRKVKLAI 550
D+ E K + L +GTC+GEHGIG GKRK+L +ELG +TV LM +K A+
Sbjct: 380 EDKTEHRKIQSFSDRLVRRALAADGTCTGEHGIGLGKRKYLREELGENTVRLMHTIKHAL 439
Query: 551 DPKRLLNPDKVL 562
DP ++NP KVL
Sbjct: 440 DPNNIMNPGKVL 451
>7290268 [C] KOG1232 Proteins containing the FAD binding domain
Length = 533
Score = 147 bits (371), Expect = 4e-35
Identities = 113/425 (26%), Positives = 201/425 (46%), Gaps = 22/425 (5%)
Query: 146 STEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHHKDLDAV 205
ST +V+A++K N+ + VVP G T L G + IVL+ +++NK+L+V AV
Sbjct: 122 STAEVAAILKYCNERRLAVVPQGGNTGLVGGSVPICDEIVLSLARLNKVLSVDEVTGIAV 181
Query: 206 LQAGVGWQQLNEYLASVPEYKNMMLGCDCGPGAHVCGMVNTNASGIGATRYGSMGANIIS 265
++AG + ++ V + LG H+ G V+TNA G+ RYG++ +++
Sbjct: 182 VEAGCILENFDQRAREVGLTVPLDLGAKAS--CHIGGNVSTNAGGVRVVRYGNLHGSVLG 239
Query: 266 ITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQVRPPYETVAVVQ 325
+ VLA G V+ +K + GY++ LF+GSEGTLG+VT++++ VA +
Sbjct: 240 VEAVLATGQVLDLMSNFKKDNTGYHMKHLFIGSEGTLGVVTKLSMLCPHSSRAVNVAFIG 299
Query: 326 FPTLKDSTNT-VAELFQKGIQLNAVELLDSSMMKCINYSNLVSKKYDNVPT------LFF 378
+ D T V+ G L++ EL+D + + L K+ N P +
Sbjct: 300 LNSFDDVLKTFVSAKRNLGEILSSCELIDERALN----TALEQFKFLNSPISGFPFYMLI 355
Query: 379 KISGLNKTVVQEYVKQ-VKQISQDNHCSKFEFAKNEQEAEELFSTRKNALYLMLDYAFNE 437
+ SG N +E + Q + + + + +E++ R+ +++ +F
Sbjct: 356 ETSGSNGDHDEEKINQFIGDGMERGEIQDGTVTGDPGKVQEIWKIREMVPLGLIEKSF-- 413
Query: 438 IDENAKMWITDCAVPLSNLAATLEELDKITATYPLTHMTLGHVGDGNIHYDIFYEPDQFE 497
+ D ++PL + ++ + + GH+GD N+H ++ E E
Sbjct: 414 ------CFKYDISLPLRDFYNIVDVMRERCGPLATVVCGYGHLGDSNLHLNVSCEEFNGE 467
Query: 498 ICKQLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVDLMRKVKLAIDPKRLLN 557
I K++ + T K +G+ S EHGIG K+ +L + MR++K +DP +LN
Sbjct: 468 IYKRVEPFVYEYTSKLKGSISAEHGIGFLKKDYLHYSKDPVAIGYMREMKKLLDPNSILN 527
Query: 558 PDKVL 562
P KVL
Sbjct: 528 PYKVL 532
>YDL178w [C] KOG1232 Proteins containing the FAD binding domain
Length = 530
Score = 142 bits (358), Expect = 1e-33
Identities = 119/442 (26%), Positives = 204/442 (45%), Gaps = 46/442 (10%)
Query: 146 STEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHHKDLDAV 205
S E VS ++ N I VVP G T L G + ++L+ + +NKI +D D V
Sbjct: 110 SVEKVSLILNYCNDEKIAVVPQGGNTGLVGGSVPIFDELILSLANLNKI-----RDFDPV 164
Query: 206 -----LQAGVGWQQLNEYLASVPEYKNMMLGCDCGP--GAHVCGMVNTNASGIGATRYGS 258
AGV + N Y+ +N M D G HV G+V TNA G+ RYGS
Sbjct: 165 SGILKCDAGVILENANNYVME----QNYMFPLDLGAKGSCHVGGVVATNAGGLRLLRYGS 220
Query: 259 MGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQVRPPY 318
+ +++ + VV+ +G +V + RK + GY+L LF+GSEGT+GI+T V++ +P
Sbjct: 221 LHGSVLGLEVVMPNGQIVNSMHSMRKDNTGYDLKQLFIGSEGTIGIITGVSILTVPKPKA 280
Query: 319 ETVAVVQFPTLKDSTNTVAELFQKGIQ-----LNAVELLD--SSMMKCINYSNLVSKKYD 371
V+ + + +D V ++F + Q L+A E +D S ++ + D
Sbjct: 281 FNVSYLSVESFED----VQKVFVRARQELSEILSAFEFMDAKSQVLAKSQLKDAAFPLED 336
Query: 372 NVP-TLFFKISGLNKTVVQEYVKQ-VKQISQDNHCSKFEFAKNEQEAEELFSTRKNALYL 429
P + + SG NK ++ ++ + ++ + A++E E + L+ R+
Sbjct: 337 EHPFYILIETSGSNKDHDDSKLETFLENVMEEGIVTDGVVAQDETELQNLWKWRE----- 391
Query: 430 MLDYAFNEIDENAKMWITDCAVPLSNLAATLEELDKITATYPLT---------HMTLGHV 480
M+ A N ++ D ++PL +L + +E + + L + GHV
Sbjct: 392 MIPEA---SQANGGVYKYDVSLPLKDLYSLVEATNARLSEAELVGDSPKPVVGAIGYGHV 448
Query: 481 GDGNIHYDIFYEPDQFEICKQLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTV 540
GDGN+H ++ I K L + G+ S EHG+G K+ ++ + V
Sbjct: 449 GDGNLHLNVAVREYNKNIEKTLEPFVYEFVSSKHGSVSAEHGLGFQKKNYIGYSKSPEEV 508
Query: 541 DLMRKVKLAIDPKRLLNPDKVL 562
+M+ +K+ DP +LNP K +
Sbjct: 509 KMMKDLKVHYDPNGILNPYKYI 530
>YEL071w [C] KOG1232 Proteins containing the FAD binding domain
Length = 496
Score = 141 bits (355), Expect = 3e-33
Identities = 130/453 (28%), Positives = 204/453 (44%), Gaps = 58/453 (12%)
Query: 141 IVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHHK 200
I+ ST+ VS +MK N + VVP G T L G + IVL+ MNK+ +
Sbjct: 71 ILLPNSTDKVSKIMKYCNDKKLAVVPQGGNTDLVGASVPVFDEIVLSLRNMNKV-----R 125
Query: 201 DLDAV-----LQAGVGWQQLNEYL--------ASVPEYKNMMLGCDCGPGAHVCGMVNTN 247
D D V AGV + +++L +P N +G G+V+TN
Sbjct: 126 DFDPVSGTFKCDAGVVMRDAHQFLHDHDHIFPLDLPSRNNCQVG----------GVVSTN 175
Query: 248 ASGIGATRYGSMGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTE 307
A G+ RYGS+ N++ + VVL +G ++ RK + GY+L LF+G+EGT+G+VT
Sbjct: 176 AGGLNFLRYGSLHGNVLGLEVVLPNGEIISNINALRKDNTGYDLKQLFIGAEGTIGVVTG 235
Query: 308 VTVKLQVRPPYETVAVVQFPTLKDSTNTVAELFQKGIQ-----LNAVELLDSSMMKC-IN 361
V++ +P + + V F ++ +TV +LF K L+A E +D ++C I
Sbjct: 236 VSIVAAAKP--KALNAVFFGI--ENFDTVQKLFVKAKSELSEILSAFEFMDRGSIECTIE 291
Query: 362 YSNLVSKKYDNVPTLFFKI--SGLNKTVVQEYVKQ-VKQISQDNHCSKFEFAKNEQEAEE 418
Y + +N + I SG NK E + +K + S+ AK++ + +
Sbjct: 292 YLKDLPFPLENQHNFYVLIETSGSNKRHDDEKLTAFLKDTTDSKLISEGMMAKDKADFDR 351
Query: 419 LFSTRKNALYLMLDYAFNEIDENAKMWITDCAVPLSNL----AATLEELDKI----TATY 470
L++ RK+ Y M+ D ++ L +L AA E L+ A
Sbjct: 352 LWTWRKSVPTACNSY--------GGMYKYDMSLQLKDLYSVSAAVTERLNAAGLIGDAPK 403
Query: 471 PLTHMT-LGHVGDGNIHYDIFYEPDQFEICKQLVAEINAVTLKNEGTCSGEHGIGTGKRK 529
P+ GHVGDGNIH +I +I L + +G+ S EHGIG K+
Sbjct: 404 PVVKSCGYGHVGDGNIHLNIAVREFTKQIEDLLEPFVYEYIASKKGSISAEHGIGFHKKG 463
Query: 530 FLEDELGSDTVDLMRKVKLAIDPKRLLNPDKVL 562
L + M+ +K DP +LNP K +
Sbjct: 464 KLHYTRSDIEIRFMKDIKNHYDPNGILNPYKYI 496
>At4g36400 [C] KOG1232 Proteins containing the FAD binding domain
Length = 524
Score = 140 bits (354), Expect = 4e-33
Identities = 114/424 (26%), Positives = 199/424 (46%), Gaps = 23/424 (5%)
Query: 146 STEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHHKDLDAV 205
+T++VS +++ + + VVP G T L G + +++N MNKIL+ V
Sbjct: 110 NTQEVSQILEYCDSRRLAVVPQGGNTGLVGGSVPVFDEVIVNVGLMNKILSFDEVSGVLV 169
Query: 206 LQAGVGWQQLNEYLASVPEYKNMMLGCDCGP--GAHVCGMVNTNASGIGATRYGSMGANI 263
+AG + E LA+ + K ++ D G H+ G V+TNA G+ RYGS+ +
Sbjct: 170 CEAGC----ILENLATFLDTKGFIMPLDLGAKGSCHIGGNVSTNAGGLRLIRYGSLHGTV 225
Query: 264 ISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQVRPPYETVAV 323
+ + V A+G V+ RK + GY+L LF+GSEG+LGIVT+V++ Q + +A
Sbjct: 226 LGLEAVTANGNVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTQPKLSSVNLAF 285
Query: 324 VQFPTLKDSTNTVAELFQK-GIQLNAVELLDSSMMKCI-NYSNLVSKKYDNVPTLFFKI- 380
+ + E + G L+A E LD++ M + N+ + V + + I
Sbjct: 286 IACKDYLSCQKLLVEAKRNLGEILSAFEFLDNNSMDLVLNHLDGVRNPVSSSENFYILIE 345
Query: 381 -SGLNKTVVQEYVKQVKQISQDNHC-SKFEFAKNEQEAEELFSTRKNALYLMLDYAFNEI 438
+G ++T +E ++ S + S A++ +A + R+ +
Sbjct: 346 TTGSDETNDREKLEAFLLKSLEKGLVSDGVIAQDINQASSFWRIREGIT--------EAL 397
Query: 439 DENAKMWITDCAVPLSNLAATLEELDKITATYPLTHMTLGHVGDGNIHYDIFYEPDQFEI 498
+ ++ D ++P+ + + +L A M GH+GDGN+H +I ++
Sbjct: 398 QKAGAVYKYDLSLPVEEIYNIVNDLRGRLANV----MGYGHLGDGNLHLNISAAEYNDKL 453
Query: 499 CKQLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVDLMRKVKLAIDPKRLLNP 558
+ + T K+ G+ S EHG+G K + +TV LM +K +DPK +LNP
Sbjct: 454 LGLIEPYVYEWTSKHRGSISAEHGLGVMKANEIFYSKSPETVALMASIKKLLDPKGILNP 513
Query: 559 DKVL 562
KVL
Sbjct: 514 YKVL 517
>CE26814 [C] KOG1232 Proteins containing the FAD binding domain
Length = 487
Score = 138 bits (347), Expect = 3e-32
Identities = 123/436 (28%), Positives = 205/436 (46%), Gaps = 32/436 (7%)
Query: 141 IVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHHK 200
++Y STE+VSA++ +K + VVP G T L G + +V++ +K+NK +
Sbjct: 70 VLYPKSTEEVSAILAYCSKNKLAVVPQGGNTGLVGGSIPVHDEVVISMNKINKQFS--FD 127
Query: 201 DLDAVLQAGVGW--QQLNEYLASVPEYKNMMLGCDCGP--GAHVCGMVNTNASGIGATRY 256
D +L+ G+ + L+ LA + M+ D G + G + T A GI RY
Sbjct: 128 DTMGILKCDSGFILEDLDNKLAKL----GYMMPFDLGAKGSCQIGGNIATCAGGIRLIRY 183
Query: 257 GSMGANIISITVVLAD--GTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQV 314
GS+ A+++ +TVVL D GTV+ RK + + LF+GSEG LG++T VT+
Sbjct: 184 GSLHAHLLGLTVVLPDEHGTVLHLGSSIRKDNTTLHTPHLFLGSEGQLGVITSVTMTAVP 243
Query: 315 RPPYETVAVVQFPTLKDSTNTVAELFQKGIQ--LNAVELLDSSMMKCINYSNLVSKKYDN 372
+P A++ + K V +L + + L++ ELLD + M+C+ +NL N
Sbjct: 244 KPKSVQSAMLGIESFKKCCE-VLKLAKSSLTEILSSFELLDDATMECLK-TNLGLHPVLN 301
Query: 373 VPTLF---FKISGLNKTVVQEYVKQ-VKQISQDNHCSKFEFAKNEQEAEELFSTRKNALY 428
PT F + SG N+ E + + + N A + EA +++ R++A
Sbjct: 302 APTPFSILVETSGSNEDHDMEKMSAFLDECLSKNLIIDGVLAGSSAEATKMWQLRESAPL 361
Query: 429 LMLDYAFNEIDENAKMWITDCAVPLSNLAATLEELDKITATYPLTHMTLGHVGDGNIHYD 488
+ + ++ D ++PL N + + + +T GH+GDGN H +
Sbjct: 362 --------AVTRDGYVYKHDVSLPLENYYELTNVMKERCGSLAKRIVTYGHLGDGNTHLN 413
Query: 489 IFYEPDQFEICKQLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVD--LMRKV 546
I E E+ K L + + + G+ S EHGIG K + G D + L +K+
Sbjct: 414 ITSEKHNEELEKLLYPFLYEWVVDHGGSISAEHGIGQLKLPY--STFGKDPEERLLTKKL 471
Query: 547 KLAIDPKRLLNPDKVL 562
K DP +LNP K +
Sbjct: 472 KNIFDPNGILNPYKTI 487
>SPBC713.03 [C] KOG1232 Proteins containing the FAD binding domain
Length = 526
Score = 133 bits (334), Expect = 8e-31
Identities = 133/497 (26%), Positives = 221/497 (43%), Gaps = 42/497 (8%)
Query: 88 PRYG--SDEDLKLCIKEIIQTIGS--DNV-KNTE-AELDHHTDNGFNPT--KPQPHQKPR 139
P+Y S++D+++ K II GS D + K+T+ A+LD + N K Q KP+
Sbjct: 46 PKYAKLSEQDVQV-FKSIIGKDGSLIDGLDKSTDPADLDAFNIDWMNKYRGKTQLALKPK 104
Query: 140 WIVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTYSTRPGIVLNTSKMNKILAVHH 199
+T+ VS ++K N+ + VVP G T L G + IVLN MN+I
Sbjct: 105 ------TTQQVSEILKYCNQKKLAVVPQGGNTGLVGGSVPVFDEIVLNLGLMNQIHTFDE 158
Query: 200 KDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGCDCGP--GAHVCGMVNTNASGIGATRYG 257
L +GV + + +LA K M D G V G T A G+ RYG
Sbjct: 159 ISGVITLDSGVILENADNFLAE----KGYMFPLDLGAKGSCQVGGCAATAAGGLRLLRYG 214
Query: 258 SMGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVKLQVRPP 317
S+ +I+ + VL DGT++ RK + G ++ LF+GSEG LG++T+++V RP
Sbjct: 215 SLHGSILGMEAVLPDGTILDNLVTLRKDNTGLDIKQLFIGSEGYLGVITKLSVICPKRPS 274
Query: 318 YETVAVVQFPTLKDSTNTVAELFQKGIQ-LNAVELLDSSMMKCIN-YSNLVSKKYDNVP- 374
VA P+ ++ +E + L+A EL+D++ ++ YS D P
Sbjct: 275 STNVAFFGVPSYENVLKAFSETRSHLTEILSAFELMDNTSQTLVDKYSGTQRPLEDEHPF 334
Query: 375 TLFFKISGLNKT-VVQEYVKQVKQISQDNHCSKFEFAKNEQEAEELFSTRKNALYLMLDY 433
+ + G NK Q+ V+ + + S A++E + L+ R+ +
Sbjct: 335 YVLVETQGSNKEHDEQKITALVEDLLEKEIISDGVLAQDESQLRVLWERREGITECL--- 391
Query: 434 AFNEIDENAKMWITDCAVPLSNLAATLEELDKITATYPLTHMT----------LGHVGDG 483
+ ++ D ++PL L + + K + L T GH+GDG
Sbjct: 392 ----AKAGSGVYKYDVSLPLPVLYDLVNDTKKRLIEFNLLDDTPEHPVIDVVGFGHMGDG 447
Query: 484 NIHYDIFYEPDQFEICKQLVAEINAVTLKNEGTCSGEHGIGTGKRKFLEDELGSDTVDLM 543
N+H +I + K L + ++ G+ S EHG+G K+ F+ + + LM
Sbjct: 448 NLHLNIAVRQFDKRVEKCLEPWVYEWVSRHRGSISAEHGLGLLKKPFVGYSKSKEMIHLM 507
Query: 544 RKVKLAIDPKRLLNPDK 560
+ +K DP ++ P K
Sbjct: 508 KTLKNVFDPNGIMLPYK 524
>Hs4501993 [R] KOG1233 Alkyl-dihydroxyacetonephosphate synthase
Length = 658
Score = 110 bits (276), Expect = 4e-24
Identities = 106/463 (22%), Positives = 197/463 (41%), Gaps = 48/463 (10%)
Query: 138 PRWIVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTY----STRPGIVLNTSKMNK 193
P +++ T +DV ++ + KYN+ ++P GGTS+ TR I L+TS+MN+
Sbjct: 206 PDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNR 265
Query: 194 ILAVHHKDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGC--DCGPGAHVCGMVNTNASGI 251
IL V +L A ++AG+ Q+L L G D + V G V+T ASG+
Sbjct: 266 ILWVDENNLTAHVEAGITGQELERQLKE----SGYCTGHEPDSLEFSTVGGWVSTRASGM 321
Query: 252 GATRYGSMGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVK 311
YG++ ++ I +V G + K+ + PR S+ G ++ +GSEGTLG++TE T+K
Sbjct: 322 KKNIYGNIEDLVVHIKMVTPRGIIEKSCQGPRMST-GPDIHHFIMGSEGTLGVITEATIK 380
Query: 312 LQVRPPYETVAVVQFPTLKDSTNTVAELFQKGIQLNAVELLDSSMMKCINYSNLVSKKYD 371
++ P Y+ V FP + + E+ ++ ++ L+D+ K + + + +
Sbjct: 381 IRPVPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRLMDN---KQFQFGHALKPQVS 437
Query: 372 NVPTLFFKISGLNKTVV---------------------QEYVKQVKQISQDNHCSKFEFA 410
++ T F + GL K + +E V Q ++ D A
Sbjct: 438 SIFTSF--LDGLKKFYITKFKGFDPNQLSVATLLFEGDREKVLQHEKQVYDIAAKFGGLA 495
Query: 411 KNEQEAEELFSTRKNALYL----MLDYAFNEIDENAKMW---ITDCAVPLSNLAATLEEL 463
E + + Y+ + Y E E + W + C + +E
Sbjct: 496 AGEDNGQRGYLLTYVIAYIRDLALEYYVLGESFETSAPWDRVVDLCRNVKERITRECKEK 555
Query: 464 DKITATYPLTHMTLGHVGDGNIHYDIFYE----PDQFEICKQLVAEINAVTLKNEGTCSG 519
A + +T + I++ + D + +Q A L N G+ S
Sbjct: 556 GVQFAPFSTCRVTQTYDAGACIYFYFAFNYRGISDPLTVFEQTEAAAREEILANGGSLSH 615
Query: 520 EHGIGTGKRKFLEDELGSDTVDLMRKVKLAIDPKRLLNPDKVL 562
HG+G ++++L++ + +++ VK +DP + +L
Sbjct: 616 HHGVGKLRKQWLKESISDVGFGMLKSVKEYVDPNNIFGNRNLL 658
>7303115 [R] KOG1233 Alkyl-dihydroxyacetonephosphate synthase
Length = 631
Score = 96.3 bits (238), Expect = 1e-19
Identities = 63/223 (28%), Positives = 118/223 (52%), Gaps = 11/223 (4%)
Query: 138 PRWIVYATSTEDVSAVMKIINKYNIPVVPFSGGTSLEGHTY----STRPGIVLNTSKMNK 193
P +V+ ++V ++++ NK+N+ +VPF GGTS+ G +R L+TS+MN+
Sbjct: 159 PDLVVWPRCHDEVVQLVRLANKHNVMLVPFGGGTSVSGAITCPQNESRMICALDTSQMNR 218
Query: 194 ILAVHHKDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGC--DCGPGAHVCGMVNTNASGI 251
+L ++ ++L ++G+ Q L L S + + +G D + + G V T ASG+
Sbjct: 219 LLWLNRENLTVCFESGIVGQDLERVLRS----EGLTVGHEPDSYEFSTLGGWVATRASGM 274
Query: 252 GATRYGSMGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTEVTVK 311
YG++ ++ + +V GT+ + PR S G + + +GSEGTLG++TEV +K
Sbjct: 275 KKNVYGNIEDLVVRVRMVTPSGTLERECSAPRVS-CGPDFNHVILGSEGTLGVITEVVLK 333
Query: 312 LQVRPPYETVAVVQFPTLKDSTNTVAELFQKGIQLNAVELLDS 354
++ P + FP + + E+ ++ Q +V L+D+
Sbjct: 334 VRPLPSLRRYGSLAFPNFEQGVLFMREVARRRCQPASVRLMDN 376
>CE26144 [R] KOG1233 Alkyl-dihydroxyacetonephosphate synthase
Length = 597
Score = 82.8 bits (203), Expect = 1e-15
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 28/300 (9%)
Query: 138 PRWIVYATSTEDVSAVMKIINKYNIPVVPFSGGTS----LEGHTYSTRPGIVLNTSKMNK 193
P +V+ S ++ +++ +N ++P GGTS L+ R I ++ + ++K
Sbjct: 135 PDIVVWPKSEHEIVKIIEGAMSHNCAIIPIGGGTSVTNALDTPETEKRAVISMDMALLDK 194
Query: 194 ILAVHHKDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGCDCGPG------AHVCGMVNTN 247
IL + ++L QAG+ Q L L G CG + + G V+T
Sbjct: 195 ILWIDRENLTCRAQAGIVGQSLERQLNKK--------GFTCGHEPDSIEFSTLGGWVSTR 246
Query: 248 ASGIGATRYGSMGANIISITVVLADGTVVKTKKRPRKSSAGYNLTGLFVGSEGTLGIVTE 307
ASG+ +YG++ ++ + V G + K + PR SS G ++ + +GSEGTLG+V+E
Sbjct: 247 ASGMKKNKYGNIEDLVVHLNFVCPKGIIQKQCQVPRMSS-GPDIHQIILGSEGTLGVVSE 305
Query: 308 VTVKLQVRPPYETVAVVQFPTLKDSTNTVAELFQKGIQLNAVELLDSSMMKCINYSNLVS 367
VT+K+ P + FP + N E+ + Q ++ L+D+ + S
Sbjct: 306 VTIKIFPIPEVKRFGSFVFPNFESGVNFFREVAIQRCQPASLRLMDNDQFVMGQALKVAS 365
Query: 368 KKYDNVPTLFFKISGLNKTVVQEYVKQVKQISQDNHCSKFEFAKNEQEAEELFSTRKNAL 427
+ + L +V + Y+ K D C+ + +E + R N L
Sbjct: 366 DSW---------WADLKSSVSKMYITSWKGFKVDEICAATCVYEGNREEVDQHEERLNKL 416
>Hs20561789 [C] KOG1231 Proteins containing the FAD binding domain
Length = 230
Score = 67.8 bits (164), Expect = 4e-11
Identities = 37/107 (34%), Positives = 59/107 (54%), Gaps = 4/107 (3%)
Query: 177 TYSTRPGIVLNTSKMNKILAVHHKDLDAVLQAGVGWQQLNEYLASVPEYKNMMLGCDCGP 236
T + G+ +N + M++IL ++ +D V++ GV + LN +L + D G
Sbjct: 125 TCPNQGGVCVNLTHMDRILELNQEDFSVVVEPGVTRKALNAHLRD----SGLWFPVDPGA 180
Query: 237 GAHVCGMVNTNASGIGATRYGSMGANIISITVVLADGTVVKTKKRPR 283
A +CGM T ASG A RYG+M N++++ VVL DG ++ T R R
Sbjct: 181 DASLCGMAATGASGTNAVRYGTMRDNVLNLEVVLPDGRLLHTAGRGR 227
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,445,840
Number of Sequences: 60738
Number of extensions: 1399447
Number of successful extensions: 3647
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3597
Number of HSP's gapped (non-prelim): 17
length of query: 572
length of database: 30,389,216
effective HSP length: 112
effective length of query: 460
effective length of database: 23,586,560
effective search space: 10849817600
effective search space used: 10849817600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)