ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII0405   suspect: LH   R     KOG4431  General function prediction only                               Uncharacterized protein, induced by hypoxia

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII0405  135385 134912 -158 
         (158 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YML030w [R] KOG4431 Uncharacterized protein induced by hypoxia        181   3e-46

>YML030w [R] KOG4431 Uncharacterized protein induced by hypoxia
          Length = 159

 Score =  181 bits (460), Expect = 3e-46
 Identities = 91/158 (57%), Positives = 115/158 (72%)

Query: 1   MSYLPSSFDSDADDLDEMPFLDKMIYHCKQQPLVPXXXXXXXXXXXXXXXNVKNGNKRKA 60
           MS +PSSFD    DLD+M F +++IYHCK+QPLVP               NV+ GNK KA
Sbjct: 1   MSRMPSSFDVTERDLDDMTFGERIIYHCKKQPLVPIGCLLTTGAVILAAQNVRLGNKWKA 60

Query: 61  QIWFRWRVALQGFTLIALVAGSYIYGTNKNERESHEEQLRKKAKMREQLWIQELERRDEE 120
           Q +FRWRV LQ  TL+ALVAGS+IYGT+  E ++ EEQL++KAKMRE+LWIQELERR+EE
Sbjct: 61  QYYFRWRVGLQAATLVALVAGSFIYGTSGKELKAKEEQLKEKAKMREKLWIQELERREEE 120

Query: 121 TKLRRQKAELARQKAKEMEQETSKLQQELKDLEERLKK 158
           T+ RR++AELAR K  E E+E   L++EL DLE +L K
Sbjct: 121 TEARRKRAELARMKTLENEEEIKNLEKELSDLENKLGK 158


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.315    0.130    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,637,003
Number of Sequences: 60738
Number of extensions: 325376
Number of successful extensions: 7257
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7256
Number of HSP's gapped (non-prelim): 1
length of query: 158
length of database: 30,389,216
effective HSP length: 97
effective length of query: 61
effective length of database: 24,497,630
effective search space: 1494355430
effective search space used: 1494355430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)