ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0506 check: MH D KOG4589 Cell cycle control, cell division, chromosome partitioning Cell division protein FtsJ
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0506 174579 173713 -289
(289 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL136c [D] KOG4589 Cell division protein FtsJ 318 7e-87
SPBC2G2.15c [D] KOG4589 Cell division protein FtsJ 163 2e-40
Hs7110661 [DR] KOG1099 SAM-dependent methyltransferase/cell divi... 112 8e-25
CE23932 [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 106 3e-23
SPAC4F10.03c [DR] KOG1099 SAM-dependent methyltransferase/cell d... 102 5e-22
7300552 [D] KOG4589 Cell division protein FtsJ 102 5e-22
CE16052 [D] KOG4589 Cell division protein FtsJ 101 1e-21
SPAC1687.11 [AR] KOG1098 Putative SAM-dependent rRNA methyltrans... 100 2e-21
Hs17017991 [AR] KOG1098 Putative SAM-dependent rRNA methyltransf... 100 4e-21
7300216 [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 99 7e-21
7293173 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 99 7e-21
CE23796 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 96 5e-20
CE23795 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 96 5e-20
ECU09g0920 [DR] KOG1099 SAM-dependent methyltransferase/cell div... 91 2e-18
YBR061c [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 89 6e-18
7300710 [DR] KOG1099 SAM-dependent methyltransferase/cell divisi... 87 2e-17
Hs7019377 [D] KOG4589 Cell division protein FtsJ 86 6e-17
YCL054w [AR] KOG1098 Putative SAM-dependent rRNA methyltransfera... 84 2e-16
At4g25730 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfe... 84 3e-16
At5g01230 [DR] KOG1099 SAM-dependent methyltransferase/cell divi... 82 7e-16
At5g13830 [AR] KOG1098 Putative SAM-dependent rRNA methyltransfe... 77 3e-14
ECU07g1340 [AR] KOG1098 Putative SAM-dependent rRNA methyltransf... 67 4e-11
>YGL136c [D] KOG4589 Cell division protein FtsJ
Length = 320
Score = 318 bits (814), Expect = 7e-87
Identities = 160/297 (53%), Positives = 202/297 (67%), Gaps = 33/297 (11%)
Query: 23 VRYNSNAQNRWLARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQN---QKVLDLG 79
VRYNSN+QNRWL RQ D +TK AK Q RSRAAFKLM IDDKYR F +N Q++LDLG
Sbjct: 21 VRYNSNSQNRWLNRQLKDPYTKEAKVQNLRSRAAFKLMQIDDKYRLFSKNRTDQRILDLG 80
Query: 80 FAPGAWSQVARKRIGSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQL 139
+APGAWSQVAR+R MI+GVD+L C PP GV S+QANIL+K+TH+LIRL F++H QL
Sbjct: 81 YAPGAWSQVARQRSSPNSMILGVDILPCEPPHGVNSIQANILAKRTHDLIRLFFSKHFQL 140
Query: 140 NKHDQLHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQ---------NIERYPVDVV 190
N+HD LHKDHGY Q+M Y+E+F+ DI + E++PVDV+
Sbjct: 141 NRHDDLHKDHGYFQNMLEEELTHVKDTELYREIFTSDDIYETPNTNSTLIEREKFPVDVI 200
Query: 191 LSDM---------------------MANTTGIQSKDHYMSMDLCDAALIVAIDLLKPGGS 229
+SDM MANT+G+ +DHY S+DLCDAAL+ AIDLL+P GS
Sbjct: 201 ISDMYEPWPQTTGFWNNITNQAYFRMANTSGVSIRDHYQSIDLCDAALVTAIDLLRPLGS 260
Query: 230 FTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVARGKKTDIDKLKVF 286
F CKLY G E+ L +KR++ VF V +FKP+ASR+ESKE Y++ KK ++DKL VF
Sbjct: 261 FVCKLYTGEEENLFKKRMQAVFTNVHKFKPDASRDESKETYYIGLKKKRNVDKLDVF 317
>SPBC2G2.15c [D] KOG4589 Cell division protein FtsJ
Length = 218
Score = 163 bits (413), Expect = 2e-40
Identities = 92/253 (36%), Positives = 134/253 (52%), Gaps = 37/253 (14%)
Query: 25 YNSNAQNRWLARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGA 84
+ S W A++ D + K +K FRSRAA+KL++++ KYRF + V+D+GFAPG+
Sbjct: 2 FGSKTLFSWAAKRSKDFYRKKSKIDNFRSRAAYKLIELNSKYRFINKEDVVIDVGFAPGS 61
Query: 85 WSQVARKRIGSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQ 144
WSQVA+K +G+ G ++G+D+ PP+GV + +I T L +L A
Sbjct: 62 WSQVAKKLVGNKGKVIGIDIQHIAPPEGVLPIYGDIRDPNT--LTKLFEA---------- 109
Query: 145 LHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSK 204
L + + + +I+ VD V+SDM+ TGI+ +
Sbjct: 110 -------------------------LRLLHEPNTNDSIDCRVVDAVISDMLHKATGIRIR 144
Query: 205 DHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRN 264
DH +SM+LC +AL VA+ LK GSF CK Y G ED L+ LK F+ V KP AS
Sbjct: 145 DHALSMELCASALHVALTFLKSNGSFICKFYMGDEDADLQNLLKSHFRFVQVMKPKASLK 204
Query: 265 ESKELYFVARGKK 277
ES+E YFV +K
Sbjct: 205 ESREAYFVCLERK 217
>Hs7110661 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 329
Score = 112 bits (279), Expect = 8e-25
Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 51/243 (20%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRIG 94
++ K D + + AKE +R+R+AFKL+ +D +++ F+ + +DL APG+WSQV ++IG
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 95 S--GGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYL 152
G ++ VDL P GV +Q +I
Sbjct: 65 GQGSGHVVAVDLQAMAPLPGVVQIQGDIT------------------------------- 93
Query: 153 QHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDL 212
+L + +I Q+ + P D+V+ D + TG+ D YM L
Sbjct: 94 ------------------QLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQL 135
Query: 213 CDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFV 272
AAL +A +LKPGG F K++ G + TLL +L+ F V KP +SRN S E + V
Sbjct: 136 LLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAV 195
Query: 273 ARG 275
+G
Sbjct: 196 CQG 198
>CE23932 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 337
Score = 106 bits (265), Expect = 3e-23
Identities = 75/239 (31%), Positives = 109/239 (45%), Gaps = 52/239 (21%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI- 93
+R K D + + AKE ++R+R+AFKLM IDD+++ K ++ +DL APG+WSQV KR+
Sbjct: 5 SRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLY 64
Query: 94 --GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGY 151
I+ +DL P GV LQ +I S T Q+ KH K
Sbjct: 65 EEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTAN----------QVIKHFSGEKS--- 111
Query: 152 LQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMD 211
D+V+ D + TGI S D +M +
Sbjct: 112 ------------------------------------DIVICDGAPDVTGIHSLDEFMQAE 135
Query: 212 LCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELY 270
L AA + +LK GG+F K++ +LL ++KK FKKV KP +SR S E +
Sbjct: 136 LILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAF 194
>SPAC4F10.03c [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 285
Score = 102 bits (255), Expect = 5e-22
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 59/248 (23%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI- 93
++ K D + + AKEQ +R+R+AFKL+ +++++ F+ ++V+DL APG+WSQV + +
Sbjct: 5 SKDKRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQVLSRELL 64
Query: 94 ---------GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQ 144
MI+ VDL P GV +LQ +I T +I F
Sbjct: 65 KNIDTSIAADEKPMIVAVDLQPMAPIDGVCTLQLDITHPNTLSIILSHFGNE-------- 116
Query: 145 LHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSK 204
P D+V+SD + TG+
Sbjct: 117 -----------------------------------------PADLVVSDGAPDVTGLHDL 135
Query: 205 DHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRN 264
D Y+ + AA +A+ +LKPGG F K++ G + +LL +L+ +F+KV KP +SR
Sbjct: 136 DEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYSQLRLMFRKVSCAKPRSSRA 195
Query: 265 ESKELYFV 272
S E + V
Sbjct: 196 SSIESFVV 203
>7300552 [D] KOG4589 Cell division protein FtsJ
Length = 250
Score = 102 bits (255), Expect = 5e-22
Identities = 70/261 (26%), Positives = 110/261 (41%), Gaps = 40/261 (15%)
Query: 21 RLVRYNSNAQNRWLARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGF 80
R ++ S + WL RQ D + + A+ +R R+AFKL++IDDKY + VL+ G
Sbjct: 29 RNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYGILRPGDTVLECGA 88
Query: 81 APGAWSQVARKRIGSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLN 140
APG+W+QVA +R + G P V+S+
Sbjct: 89 APGSWTQVAVERTNANGK------QERAPQGAVFSID----------------------- 119
Query: 141 KHDQLHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTG 200
L H + +Q + + ++ V+ VLSDM N TG
Sbjct: 120 -----------LLHFHAVPGATIFGGMDFTSSLAQKRLREALQDRKVNCVLSDMAPNATG 168
Query: 201 IQSKDHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPN 260
++ D +LC L A+ + P K++ + LE+ + + ++KV R KP
Sbjct: 169 VRMLDQESITNLCYEVLRFALAMSAPQAHLVVKVWDNGDVPKLERDMLRFYEKVKRVKPR 228
Query: 261 ASRNESKELYFVARGKKTDID 281
ASR +S E + VAR K D
Sbjct: 229 ASRGDSAEHFLVARNFKGATD 249
>CE16052 [D] KOG4589 Cell division protein FtsJ
Length = 214
Score = 101 bits (252), Expect = 1e-21
Identities = 74/252 (29%), Positives = 110/252 (43%), Gaps = 55/252 (21%)
Query: 31 NRWLARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVAR 90
++++ RQ D F A+E +R+R+AFKL++I++K++F K V+D+G APG+W QV
Sbjct: 12 HKYIQRQSTDEFAVKAREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVV 71
Query: 91 KRIGSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHG 150
++ G GVDL P +G L LS T ++L
Sbjct: 72 QKC-PNGYASGVDLQNVLPIRGADILS---LSDITDPAVKL------------------- 108
Query: 151 YLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSM 210
I + + VDVVLSDM N TG + DH +
Sbjct: 109 --------------------------KIREKLAHRQVDVVLSDMAPNPTGDNATDHLRLI 142
Query: 211 DLCDAALIV-----AIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNE 265
+LC + + I+L+K G + CK++ GS + L F V KP A R+
Sbjct: 143 ELCRSVFRLFSVENEIELVK-NGVYLCKIWDGSARAEFVRELSDRFSTVKTVKPTACRDN 201
Query: 266 SKELYFVARGKK 277
S ELY R K
Sbjct: 202 SAELYLFCRNFK 213
>SPAC1687.11 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 802
Score = 100 bits (250), Expect = 2e-21
Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 49/243 (20%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRIG 94
A+ + D + K AKEQ +RSRAAFKL+ ++ KY F ++ + ++DL APG W QVA K
Sbjct: 9 AKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASKTCK 68
Query: 95 SGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQH 154
G +I+GVDL P ++ +I S K +R GYL
Sbjct: 69 PGSLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLR-------------------GYL-- 107
Query: 155 MXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLCD 214
+ + DVVL D N +D Y L
Sbjct: 108 ----------------------------KTWKADVVLHDGAPNVGSAWLQDAYGQAQLVL 139
Query: 215 AALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVAR 274
++ +A + L GG+F K++ + L K++F KV+ KP +SRN S E++ V R
Sbjct: 140 MSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIFVVCR 199
Query: 275 GKK 277
G K
Sbjct: 200 GYK 202
>Hs17017991 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 847
Score = 99.8 bits (247), Expect = 4e-21
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 49/242 (20%)
Query: 34 LARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI 93
+ + + D F AKE +RSR+AFKL+ ++ +++F ++ + +LDL APG W QVA K +
Sbjct: 7 VGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFM 66
Query: 94 GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQ 153
+I+GVDL+ P V +LQ +I +++ + +R
Sbjct: 67 PVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALR----------------------- 103
Query: 154 HMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLC 213
+ ++ + VDVVL+D N D Y L
Sbjct: 104 --------------------------KELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLT 137
Query: 214 DAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVA 273
AL +A D L GGSF K++ + L +++F++V KP ASR+ES E++ V
Sbjct: 138 LMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVC 197
Query: 274 RG 275
+G
Sbjct: 198 QG 199
>7300216 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 302
Score = 99.0 bits (245), Expect = 7e-21
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 57/247 (23%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI- 93
++ K D + + AK++ +R+R+AFKL+ +D+ Y Q+ +DL APG+WSQV +++
Sbjct: 5 SKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 94 --------GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQL 145
S I+ VDL P +G+ LQ +I + T E I H N+ QL
Sbjct: 65 DTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAI----IGHFGGNEKAQL 120
Query: 146 HKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKD 205
V+ D + TG+ D
Sbjct: 121 --------------------------------------------VVCDGAPDVTGVHEMD 136
Query: 206 HYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNE 265
YM L AAL +A +L+ GG+F K++ G+ +LL +++ FKK D +KP +SR
Sbjct: 137 EYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKKFDIYKPPSSRPS 196
Query: 266 SKELYFV 272
S E + V
Sbjct: 197 SIEAFVV 203
>7293173 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 817
Score = 99.0 bits (245), Expect = 7e-21
Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 49/242 (20%)
Query: 34 LARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI 93
+ + + D F + AKE RSRAAFKL+ ++ K+ F +Q+Q LDL APG W QVA++ +
Sbjct: 7 VGKTRKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNM 66
Query: 94 GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQ 153
+++GVDL P G L +I ++K +
Sbjct: 67 PVSSIVIGVDLFPIRPIAGCIGLVEDITTEKCRQ-------------------------- 100
Query: 154 HMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLC 213
+++ ++ + DVVL D N D Y + L
Sbjct: 101 -----------------------SLTKELQSWKADVVLHDGAPNVGRNWLYDAYQQICLT 137
Query: 214 DAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVA 273
AL ++ L+ GG F K++ + L LK++FKKV KP+ASR ES E++ V
Sbjct: 138 LNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASRKESAEIFVVC 197
Query: 274 RG 275
+G
Sbjct: 198 QG 199
>CE23796 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 719
Score = 96.3 bits (238), Expect = 5e-20
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 49/239 (20%)
Query: 34 LARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI 93
+ +Q+ D + K AKE +RSRAAFKL+ ++ ++ F ++++ +DL APG W QVA + +
Sbjct: 7 IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFM 66
Query: 94 GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQ 153
+I+GVDL P K +LQ +I + +T I+
Sbjct: 67 PVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIK----------------------- 103
Query: 154 HMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLC 213
+ ++ + D VL D N D + L
Sbjct: 104 --------------------------KELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLT 137
Query: 214 DAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFV 272
+AL +A +L+ GG+F K++ ++ + L + +K+FK+V +KP ASR ES E++ V
Sbjct: 138 LSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVV 196
>CE23795 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 833
Score = 96.3 bits (238), Expect = 5e-20
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 49/239 (20%)
Query: 34 LARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI 93
+ +Q+ D + K AKE +RSRAAFKL+ ++ ++ F ++++ +DL APG W QVA + +
Sbjct: 7 IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFM 66
Query: 94 GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQ 153
+I+GVDL P K +LQ +I + +T I+
Sbjct: 67 PVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIK----------------------- 103
Query: 154 HMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLC 213
+ ++ + D VL D N D + L
Sbjct: 104 --------------------------KELKTWSADCVLHDGAPNVGLNWVHDAFQQNCLT 137
Query: 214 DAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFV 272
+AL +A +L+ GG+F K++ ++ + L + +K+FK+V +KP ASR ES E++ V
Sbjct: 138 LSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVV 196
>ECU09g0920 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 237
Score = 90.9 bits (224), Expect = 2e-18
Identities = 63/244 (25%), Positives = 104/244 (41%), Gaps = 53/244 (21%)
Query: 37 QKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRI--- 93
+K D + + AK+ ++R+R+ +KLM ID+++ F+ + V+DL APG+WSQ A +++
Sbjct: 5 EKRDVYYRLAKKNKYRARSVYKLMHIDEEHDIFRDVEGVVDLCAAPGSWSQYASEKLLKR 64
Query: 94 GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQ 153
G I+ VD+ P +GV ++ +I S E I R
Sbjct: 65 NRGARIVSVDIQDIVPIEGVMCIKDDITSASCLEKILEVLGR------------------ 106
Query: 154 HMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLC 213
P D+V+ D + TGI D Y+ ++L
Sbjct: 107 --------------------------------PADLVICDGAPDITGIHEIDEYLQIELL 134
Query: 214 DAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVA 273
+AL ++ + +PG SF K G + +K + V KP ASR +S E +
Sbjct: 135 KSALATSLRVSRPGSSFVGKYLRGECTPYIAGHFRKFYGGVTLLKPKASRTDSMECFLYC 194
Query: 274 RGKK 277
G K
Sbjct: 195 TGMK 198
>YBR061c [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 310
Score = 89.4 bits (220), Expect = 6e-18
Identities = 69/251 (27%), Positives = 113/251 (44%), Gaps = 59/251 (23%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQN--QKVLDLGFAPGAWSQVARKR 92
++ K D + + AKEQ +R+R+AFKL+ ++D++ F ++V+DL APG+WSQV ++
Sbjct: 5 SKDKRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSWSQVLSRK 64
Query: 93 I--------GSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQ 144
+ I+ VDL +P V +LQA+I KT AR ++L +++
Sbjct: 65 LFDESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKT-------LARILKLFGNEK 117
Query: 145 LHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSK 204
D V SD + TG+
Sbjct: 118 ------------------------------------------ADFVCSDGAPDVTGLHDL 135
Query: 205 DHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRN 264
D Y+ L +AL + +LK GG+F K++ G + +L +L +F K+ KP +SR
Sbjct: 136 DEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYSQLGYLFDKIVCAKPRSSRG 195
Query: 265 ESKELYFVARG 275
S E + V G
Sbjct: 196 TSLEAFIVCLG 206
>7300710 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 320
Score = 87.4 bits (215), Expect = 2e-17
Identities = 67/240 (27%), Positives = 110/240 (44%), Gaps = 41/240 (17%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRIG 94
++ K D F + AKEQ +R+R+AFKL+ D+ ++ + + +DL APG+WSQ
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQ------- 57
Query: 95 SGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQH 154
+L+K+ +E + +++ D LQ
Sbjct: 58 -------------------------VLAKRLYEPLPPEEREKVKIIAVD--------LQG 84
Query: 155 MXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLCD 214
M KE ++ I + +V+SD ++TG+ D Y+ +L
Sbjct: 85 MAPIEGVKQLRADISKESTAEA-IIEFFGGEKAQIVVSDGAPDSTGMHDFDSYVQGELLL 143
Query: 215 AALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVAR 274
+AL ++ +L+ GGSF K+Y + L +LK+ FK V FKP+ASRN S E + VAR
Sbjct: 144 SALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVCVFKPSASRNSSIEAFVVAR 203
>Hs7019377 [D] KOG4589 Cell division protein FtsJ
Length = 246
Score = 85.9 bits (211), Expect = 6e-17
Identities = 42/86 (48%), Positives = 56/86 (64%)
Query: 188 DVVLSDMMANTTGIQSKDHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRL 247
DV+LSDM N TG + DH + LC L V D+L+PGG+F CK +AGS+ L++RL
Sbjct: 149 DVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRL 208
Query: 248 KKVFKKVDRFKPNASRNESKELYFVA 273
+ F+ V KP ASR ES E+YF+A
Sbjct: 209 TEEFQNVRIIKPEASRKESSEVYFLA 234
Score = 80.5 bits (197), Expect = 3e-15
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 9/112 (8%)
Query: 27 SNAQNRWLARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWS 86
+ A++ WL R D F KAAK + +R R+AFKL++++++++ + +VLD G APGAWS
Sbjct: 28 TGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWS 87
Query: 87 QVARKRIGSG--------GMIMGVDLLRCTPPKG-VYSLQANILSKKTHELI 129
QVA +++ + G ++GVDLL P +G + A++ +T + I
Sbjct: 88 QVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRI 139
>YCL054w [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 841
Score = 84.3 bits (207), Expect = 2e-16
Identities = 64/239 (26%), Positives = 107/239 (43%), Gaps = 50/239 (20%)
Query: 40 DHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKV-LDLGFAPGAWSQVARKRIGSGGM 98
D + AKE+ +R+R++FK++ I++KY F + KV +DL APG+W QVA K +
Sbjct: 14 DRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVASKLCPVNSL 73
Query: 99 IMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQHMXXX 158
I+GVD++ P V + Q++I ++ +R GY+
Sbjct: 74 IIGVDIVPMKPMPNVITFQSDITTEDCRSKLR-------------------GYM------ 108
Query: 159 XXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLCDAALI 218
+ + D VL D N +D + L AL
Sbjct: 109 ------------------------KTWKADTVLHDGAPNVGLGWVQDAFTQSQLTLQALK 144
Query: 219 VAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFVARGKK 277
+A++ L G+F K++ + L +++F+KV+ KP ASRN S E++ V +G K
Sbjct: 145 LAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFK 203
>At4g25730 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 821
Score = 83.6 bits (205), Expect = 3e-16
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 46/237 (19%)
Query: 36 RQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRIGS 95
+ + D + + AKE+ FRSRA++KL+ +D KY VLDL APG W QVA +++
Sbjct: 7 KHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPV 66
Query: 96 GGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYLQHM 155
G +++G+DL+ P +G ++ +I + I+ Q+ + HG
Sbjct: 67 GSLVLGIDLVPILPVRGCVTMTQDITRTECKSKIK-------------QVMEQHGV---- 109
Query: 156 XXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDLCDA 215
++VL D N G +++ L
Sbjct: 110 -----------------------------SAFNLVLHDGSPNVGGAWAQEAMSQNALVID 140
Query: 216 ALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNASRNESKELYFV 272
++ +A + L G+ K+ LL L ++F+KV+ FKP ASR+ S E Y V
Sbjct: 141 SVRLATEFLARNGNLVTKMCVPEPFFLLAFLLVQLFEKVEVFKPPASRSASAETYLV 197
>At5g01230 [DR] KOG1099 SAM-dependent methyltransferase/cell division protein
FtsJ
Length = 287
Score = 82.4 bits (202), Expect = 7e-16
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 61/221 (27%)
Query: 35 ARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQV------ 88
+R K D + + AKE+ +R+R+AFKL+ ID+++ F+ ++V+DL APG+WSQV
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLY 64
Query: 89 ------ARKRIGSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNKH 142
A + G +I+ +DL P +GV +Q +I + +T E++ RH K
Sbjct: 65 LPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVV----IRHFDGCK- 119
Query: 143 DQLHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQ 202
D+V+ D + TG+
Sbjct: 120 --------------------------------------------ADLVVCDGAPDVTGLH 135
Query: 203 SKDHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLL 243
D ++ L A L + +LK GG F K++ G + +LL
Sbjct: 136 DMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLL 176
>At5g13830 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 224
Score = 77.0 bits (188), Expect = 3e-14
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 77/264 (29%)
Query: 40 DHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAPGAWSQVARKRIG---SG 96
D F + A+ + +R+AFKL+ I +Y+ K VLDLG APGAW QVA + +G SG
Sbjct: 8 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 67
Query: 97 GMIMGVDLLRCTPP----KGVYSLQANILSKKTHELIRLCFARHIQLNKHDQLHKDHGYL 152
G+++G+D+ + P V ++ A++L+ ++
Sbjct: 68 GIVVGMDIKKVKVPPQCDSRVQTIAADVLNFPRQKI------------------------ 103
Query: 153 QHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGIQSKDHYMSMDL 212
+EL Q + V+LSDM + +GI ++D +S +L
Sbjct: 104 -----------------RELSPQ--------QLGFSVILSDMCHSVSGITTRDAALSAEL 138
Query: 213 CDAALIVAI---------------------DLLKPGGSFTCKLYAGSEDTLLEKRLKKVF 251
AL +A+ +L+ GG KL + + K +F
Sbjct: 139 GMRALDLAVGQAAISQSPNDDDGGPNESRPGVLRHGGHLVIKLLESEDAQDFARICKPIF 198
Query: 252 KKVDRFKPNASRNESKELYFVARG 275
K +P A+R S+E+Y + +G
Sbjct: 199 NKASWLRPKATRPSSREIYLICQG 222
>ECU07g1340 [AR] KOG1098 Putative SAM-dependent rRNA methyltransferase SPB1
Length = 573
Score = 66.6 bits (161), Expect = 4e-11
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 28 NAQNRWLARQKN------DHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFA 81
N Q ++ + K+ D + AKE+ +R+R+AFKL+ ++ KY F + ++DL A
Sbjct: 18 NYQQSFMGKSKSTGKTRLDKYYSLAKEKGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAA 77
Query: 82 PGAWSQVARKRIGSGGMIMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQLNK 141
PG+WSQVA + + I+ +DL P K + + + T E ++L +
Sbjct: 78 PGSWSQVAAQEMPLRRKIVAIDL---EPIKFIGDVDTIVEDITTDEC-------RLKLRE 127
Query: 142 HDQLHKDHGYLQHMXXXXXXXXXXXXXYKELFSQTDISQNIERYPVDVVLSDMMANTTGI 201
HK DVVL D N
Sbjct: 128 ILGTHK---------------------------------------ADVVLHDGAPNVGTS 148
Query: 202 QSKDHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKPNA 261
D + L + +A + L+ GG F K++ + L L ++F V+ KP +
Sbjct: 149 WENDAFNQNLLVLHSARLAAEFLRKGGVFVTKVFRSQDYFSLLNVLSQLFGSVETSKPLS 208
Query: 262 SRNESKELYFVARG 275
SR++S E++ V G
Sbjct: 209 SRSQSAEIFLVCLG 222
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,399,356
Number of Sequences: 60738
Number of extensions: 637938
Number of successful extensions: 1569
Number of sequences better than 1.0e-05: 22
Number of HSP's better than 0.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1514
Number of HSP's gapped (non-prelim): 44
length of query: 289
length of database: 30,389,216
effective HSP length: 105
effective length of query: 184
effective length of database: 24,011,726
effective search space: 4418157584
effective search space used: 4418157584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)