ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0535 good B KOG1245 Chromatin structure and dynamics Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0535 183718 187074 1119
(1119 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL133w [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 427 e-119
YPL216w [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 367 e-101
At5g08630 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI lar... 67 1e-10
Hs14670392 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI la... 63 2e-09
Hs14670390 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI la... 63 2e-09
CE27187 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 59 6e-08
Hs7304919 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI lar... 52 4e-06
>YGL133w [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1264
Score = 427 bits (1098), Expect = e-119
Identities = 249/584 (42%), Positives = 331/584 (56%), Gaps = 79/584 (13%)
Query: 1 MVLYKRKTITLPDARPLPSNINRKIWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEITGT 60
MVLYKRK I LPD +PLP ++N ++W+I+ETGEWF +Y EFL+R DFY RH+FTCEITGT
Sbjct: 1 MVLYKRKPILLPDPKPLPLDLNVQVWHIEETGEWFSSYEEFLERFDFYTRHHFTCEITGT 60
Query: 61 SCLTFFEALNSEEEQFQYVEKMFPLKLREPVAKFIHFNEIRRLDMLVEQVYARFKNDYFP 120
SCLTFF+AL+SEE QF+YVE FPLKLREPVA+F+HFN IRRLD LVE+VYARFKND+FP
Sbjct: 61 SCLTFFQALDSEETQFKYVEDRFPLKLREPVARFLHFNGIRRLDALVEKVYARFKNDFFP 120
Query: 121 GETVYLRKSKQDSSHDDAEKXXXXXXXXXXXKI----------------YIIKEKAQFNA 164
GE VYLRK K DSS + +I Y+IKEK QFNA
Sbjct: 121 GEVVYLRKQK-DSSTTSSNSQQSTPQPDDMVEINSVGNPGLPQYQYQRRYVIKEKVQFNA 179
Query: 165 VIDRDTRQELVPAHAKYMLQE--AQGSTSIVADEDQIYRDRSCFTKHLIKCFCKITLRRA 222
I+ ++R+ ++PAH KYML E A + S + D+ QIYRDRS FTKHLIKCF KITL+RA
Sbjct: 180 TINPESREIVMPAHTKYMLIEEAASSNKSFIVDQGQIYRDRSTFTKHLIKCFFKITLQRA 239
Query: 223 STKMGAPWCVKDEYLPIYNLTLTWPESMLKYKEDYVDPQYLQQLQ----HMAELNREREA 278
S+KMGAPWCVK EYL +Y LT+ WP+ MLKYKED +P ++ E + +
Sbjct: 240 SSKMGAPWCVKPEYLAMYGLTMEWPKDMLKYKED--EPVVARRSNSANVSSPESEKNKRQ 297
Query: 279 SAAIGEHKREIEIARTETPDQKRIKTEELISESSPSVDHTSNDNNQIT------------ 326
S + G+ + + + +KR TE SE++ S + N +
Sbjct: 298 SKSSGKSNTSNDASNKKETKKKRKPTEVNDSENNSSEEDKKKGQNVTSETHSKKRKKEAN 357
Query: 327 ---------------NGDQQ--SITQITEDLEIPFMAPRPSAINDALLKYSKEYVPI-SN 368
N + Q +IT I +DL +P+ P N E + + S
Sbjct: 358 EEPNTENVESVPTPANAEPQAVTITSIMDDLALPYQHPPNIFPNLTYYNEKLECISLGST 417
Query: 369 SLDKPFAHDIGKLLHCYQFLMAFNATLQLSEFSWDDFVNSLRFTDPRQMMDEYVTISYED 428
L +PF GKLL YQFL F + + LS FS D F+ SL+ TDP ++ E V ++
Sbjct: 418 KLSRPF-DSFGKLLQAYQFLNTFGSKICLSHFSLDQFITSLKCTDPYELKGEVVLVNIRT 476
Query: 429 GTGTKVERIN---------------------IW--NESIYKYIDSSNSEKMKFTLSLDTM 465
T + E N W N I I NS+K+++ + D
Sbjct: 477 QTSKEQEIENNGLPMKNKAETTTEEDSENPSDWQRNSFIRDMIMKRNSDKVEYKIVHDDP 536
Query: 466 INDDYLDELKITGTSLIVECFCSLLRLFIDTSGDWTTLVPSEWL 509
+DD LD + G++L++E F +LLRLFI+ GDW+ +V W+
Sbjct: 537 ASDDILDNINHNGSALLIEVFTALLRLFINEEGDWSCIVVENWI 580
Score = 351 bits (901), Expect = 3e-96
Identities = 207/600 (34%), Positives = 328/600 (54%), Gaps = 56/600 (9%)
Query: 539 LEKCLNYRKVKWTDRLSKRQFNNGFWLIVLLGVLQDFMHLPMYKSTIQGFIKNLVPSEHT 598
LEKCLNYR V W +RL+KRQFNN +WLI+LLGVL+D HLPMY I FI+ ++P + +
Sbjct: 659 LEKCLNYRNVNWIERLTKRQFNNSYWLIILLGVLEDCRHLPMYTEFIDSFIEKIIPKDIS 718
Query: 599 PSNISLNRYLWRKFCKDISVEEKVNIMWILVEILSNYSSIIRSAMDDSMELCNQIRSERF 658
+ L + LWR FC+ +S +KVN +WILV+++S++S I++A+DDSMELC QIRSERF
Sbjct: 719 ATQ--LPKQLWRNFCRKLSFSDKVNALWILVDLVSHFSPDIKAAVDDSMELCGQIRSERF 776
Query: 659 RLNRDLKACSNTVAGLKEQFTV------------------SELQQSESSNDNIEL----- 695
++ R+LK + ++ L+ + SES+++ I+L
Sbjct: 777 KVARELKTEAAVLSNLQGDLQAIQEKLNKTDENTPSADGADKKDDSESNSEPIDLIIIEK 836
Query: 696 KENLKKATDQ-LERFQRRKSFFDARLIEADLQRLKPLGYDRYGNKIYWLEYCGVPRP--- 751
K+ L + D+ ++ Q K+F D L E DLQRLKPLG DRYGN+ +WL++ GVP P
Sbjct: 837 KQKLIEEQDKKVQALQSDKNFLDNCLFENDLQRLKPLGLDRYGNRYFWLDHNGVPFPQYP 896
Query: 752 ---NIFSKASHLLS---NRLWIQGPVKEAVLYYFKITEEEYNQWISLANELGKIQATKQV 805
N K+++ LS RL IQGP + ++ +++E+ + W + N G +AT++V
Sbjct: 897 AGMNETPKSNNSLSYHSGRLLIQGPKASSAKFFLNVSDEQLSNWQKIRNSEGISEATREV 956
Query: 806 FHVYRDEKGCYFHYDKEGDIMLINEEGVFNTFIELSPLQRKIIDETPEGLLFTPNDWIFL 865
F + + G Y + + ++ L++ N IEL+P+Q+KI+DETP LL +P+ W +
Sbjct: 957 FGISKTSSGSYNYVENGIEVELLDSNDRVNPLIELTPIQKKIMDETPSRLLLSPDQWYCI 1016
Query: 866 QDPEQLISMTNWWDSWGKREHETLKQLQSVMEPVIETLN------------QYKTQVQDE 913
E L + +W D+WG++EH+ L+Q++ +ME + +L+ + + ++ E
Sbjct: 1017 DKLEDLSRIMDWLDNWGRKEHDLLRQIRPIMERIKSSLSLRDHALSLTAFTKNEEKLLKE 1076
Query: 914 VTXXXXXXXXXXXXXXXXD-------NELXXXXXXXXXXXXXIEGELEKIAQDIMALDDS 966
+ D +E+ I+ +LE IA ++M LDDS
Sbjct: 1077 LENNEFTENELNVDSMDVDDKNSGVKSEVDVQVDAEEKREAVIDEKLEVIADELMKLDDS 1136
Query: 967 SKTRKILLKLEQLEAQRDELLAKKKALDGKETENGAKMSRLQRKSLRASRDRKMTVLKKS 1026
SKTR +L ++++LE QRDELL +KK++ + ++R +RK + SR K+ +
Sbjct: 1137 SKTRNVLNRIQELEDQRDELLEQKKSIINSQRPGARILARSERKRTKISRGNKVNKQIEI 1196
Query: 1027 FDKLLNLQRETERISINNWTNRKAIEAFGSELAKCNGNPKTSKNPEPVTVSDTFAEILRQ 1086
L+N + + W N A +GS L K K S E TV D +I+ Q
Sbjct: 1197 LTDLVNYRHFKAMEDVIAWKNVLANSIWGSSLRKNASGNKRSGVIE--TVDDKLKDIVGQ 1254
>YPL216w [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1102
Score = 367 bits (943), Expect = e-101
Identities = 261/954 (27%), Positives = 438/954 (45%), Gaps = 87/954 (9%)
Query: 1 MVLYKRKTITLPDARPLPSNINRKIWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEITGT 60
MVL R+ I + + + W I+E+ E Y L++LDFY+R FTCEI+G
Sbjct: 1 MVLLNRRKIQPKEIGQSADSFSETPWVIKESSERINDYDSDLKKLDFYKRDIFTCEISGK 60
Query: 61 SCLTFFEALNSEEEQFQYVEKMFPLKLREPVAKFIHFNEIRRLDMLVEQVYARFKNDYFP 120
L++F+AL SEE+ + V + P +LR+ +A F +F+ IR++ LVE + RF N +F
Sbjct: 61 DGLSYFKALKSEEQHREKVRYLLPKELRKAIANFANFSPIRKVGHLVESAFQRFSNRFFI 120
Query: 121 GETVYLRKSKQDS--SHDDAE-KXXXXXXXXXXXKIYIIKEKAQFNAVIDRDTRQELVPA 177
G+TV L+ ++++ ++ + E ++++K+ Q N +++ + + P
Sbjct: 121 GDTVCLKTIQKNALITYKEGEPNLVESPTIENNVTLFLVKDVFQSNGMMESEKGEISAPK 180
Query: 178 HAKYMLQEAQGSTS----IVADEDQIYRDRSCFTKHLIKCFCKITLRRASTKMGAPWCVK 233
+ Y++ E S ++ +++I R S F+K +I CF L + S K APW VK
Sbjct: 181 LSLYLITECLNRESKGAALIVGQNEIKRPESHFSKFIIACFLNEILIKVSNKEHAPWRVK 240
Query: 234 DEYLPIYNLTLTWPESMLKYKEDYVDPQYLQQLQHMAELNREREASAAIGEHKREIEIAR 293
EY+ Y++ +M+ Y D ++ + L E+ + K E +
Sbjct: 241 QEYIERYDVNPKCSPNMIDYLPDRMNS---SSSELYTPLTIPPESDVEPADWKETSETSE 297
Query: 294 TETPDQKRIKTEELISESSPSVDHTSNDNNQITNGDQQSITQITEDLEIPFMAPRPSAIN 353
T +IK + E S S DH ++ N + D + +D E+PF P N
Sbjct: 298 TSETSLSKIKA--IDDEISVSFDHIYDNVNSLAYND---LKGTVDDKELPFTGPSIPFEN 352
Query: 354 DALLKYSKEYVPISNSLDKPFAH-DIGKLLHCYQFLMAFNATLQLSEFSWDDFVNSLRFT 412
+ L S EY I K + +LL YQFL F + LS F++D F+ +++ T
Sbjct: 353 ISYLDSSLEYKNIDQKWFKECSQFPTERLLVVYQFLSFFGRFIGLSHFNFDQFLTTIKCT 412
Query: 413 DPRQMMDEYVTIS--------------------YEDGTGTKV---ERINIWNESIYKYID 449
P ++DEYV I+ Y T + V E+ N++N + I
Sbjct: 413 SPEALVDEYVKINFLKTYNSKGSFTNEKPRNEIYNQVTSSNVSQREKANVFNADESQRIP 472
Query: 450 SS---NSEKMKFTLSLDT------------MINDDYLDELKITGTSLIVECFCSLLRLFI 494
S+ N + KF T + NDD + L ++ CSL+ L
Sbjct: 473 SNFTRNQKMRKFITDKSTEFVMYSIFKGKPLKNDDMEFQSYEKVNILYIDIVCSLMCLMT 532
Query: 495 DTSGDWTTLVPSEWLXXXXXXXXXXXXXXXXXXXXXXXADLESLLEKCLNYRKVKWTDRL 554
D DW + W +++ +EKCLNY W L
Sbjct: 533 DNEPDWNCNLMDNW-------------TEEKRKEEGNKTEIDIAIEKCLNYGDTSWVKLL 579
Query: 555 SKRQFNNGFWLIVLLGVLQDFMHLPMYKSTIQGFIKNLVPSEHTPSNISLNRYLWRKFCK 614
+ F+NG WLI LLG+LQ H+ Y + K ++P + + ++L LW F K
Sbjct: 580 HNKNFSNGNWLICLLGILQQNTHMIAYSDVAKCITKKILPL--SMNFVNLGDELWDNFRK 637
Query: 615 DISVEEKVNIMWILVEILSNYSSIIRSAMDDSMELCNQIR-------SERFRLNRDLKAC 667
+S+++K++++W+LV+ SN+SS I+ +D +LCN IR E +L R LK
Sbjct: 638 RLSIKDKIDVLWVLVDFASNFSSYIKELVDKVPKLCNGIRLKLDSAKKEYIKLKRQLKTL 697
Query: 668 SNTVAGLKEQFTVSELQQSESSNDNIELKENLKKATDQLERFQRRKSFFDARLIEADLQR 727
+ L +++ E LK + + + +F +A+LI++D++R
Sbjct: 698 TKNRVKLHSNVSMNRYGSDECKGKVNALKVKIAYLMEDI-------AFLEAKLIQSDIKR 750
Query: 728 LKPLGYDRYGNKIYWLEYCGVPRPNIFSKASHLLSN--RLWIQGPVKEAVLYYFKITEEE 785
L+ LG DR GN+ YW++ G + S+ + L N LW+QGP + + + + E
Sbjct: 751 LEILGKDRNGNRYYWMDSNG--SSSAISEKNEELYNCCFLWVQGPSEADINFCLDVDVES 808
Query: 786 YNQWISLANELGKIQATKQVFHVYRDEKGCYFHYDKEGDIMLINEEGVFNTFIELSPLQR 845
+W LA G ATK+VF ++R G Y+ + + M+IN G+ + + +
Sbjct: 809 LKKWELLAKAKGTAYATKEVFSIFRSTDGSYYQIAQGENFMIINSNGILMRPTIPAFIDK 868
Query: 846 KIIDETPEGLLFTPNDWIFLQDPEQLISMTNWWDSWGKREHETLKQLQSVMEPV 899
KII ETPE LL + + W F D E + + + D + E + K L S M+ +
Sbjct: 869 KIISETPEKLLLSHHQWAFFNDIEDIHMLVDRLDDLRENEGQLKKALTSKMDRI 922
>At5g08630 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 723
Score = 67.4 bits (163), Expect = 1e-10
Identities = 87/414 (21%), Positives = 170/414 (41%), Gaps = 88/414 (21%)
Query: 1 MVLYKRKTITLPDARPLPSNINRK--IWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEIT 58
M L K+K+ L + P N+ + ++ ++ T E F Y +L+RL+ YR +TC+ T
Sbjct: 1 MPLLKKKSHKLLEP---PKNLEPQELVYQVRLTNEIFRDYQLYLKRLNLYRNRVWTCKST 57
Query: 59 GTSCLTFFEALNSEEEQFQYVEKMFPLKLREPVAKFIHFNEIRRLDMLVEQVYARFKNDY 118
G + L++ EAL+SE+ + V+ + P +L P + I F+ + D L +++ ++ +
Sbjct: 58 GKTSLSYEEALDSEKLAGKKVQTL-PRELVAPALRIIQFSTLSLKD-LADKIATELQDCF 115
Query: 119 FPGETVYLRKSKQDSSHDDAEKXXXXXXXXXXXKIYIIKEKAQFNAVIDRDTRQELVPAH 178
FPG +Y + + + V D D++ +
Sbjct: 116 FPGAELYGERDGE------------------------LHPCKILRIVSDGDSKPQY---E 148
Query: 179 AKYMLQEAQGSTSIVADEDQIYRDRSCFTKHLIKCFCKITLRRASTKMGAPWCVKDEYLP 238
++ + + + V + + + F+++ +K F R ST PW V D
Sbjct: 149 VGFLDKNKEVDDNTVLFGEDLSWKKFPFSRNFLKSFI-----RDSTCHSIPWVVNDYLAK 203
Query: 239 IYNLTLTWPESMLKYKEDYVDPQYLQQLQHMAELNREREASAAIGEHKREIEIARTETPD 298
+ +T P+ + +Y+ Q EL ++R+ G R+
Sbjct: 204 AHEITRKIPKEL--------QNKYVFQ---NGELVQQRKQEDKTGRENRK---------- 242
Query: 299 QKRIKTEELISESSPSVDHTSNDNNQITNGDQQSITQITEDLEI---PFMAPRPSAINDA 355
+KR + + ++E + + ++ ++++I EDL + P + RPS D
Sbjct: 243 RKRAENGKHVAEET---------DREVNGSEEEAINYPIEDLLLPPDPDVTQRPSPSRDF 293
Query: 356 LLKYSKEYVPISNSLDKPFAHDIGKLLHCYQFLMAFNATLQLSEFSWDDFVNSL 409
VP+ +G LL + F +F L L FS +DF N++
Sbjct: 294 -------SVPMD---------CVGDLLMVWDFCTSFGRQLHLWRFSLEDFENAV 331
>Hs14670392 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1483
Score = 63.2 bits (152), Expect = 2e-09
Identities = 67/296 (22%), Positives = 114/296 (37%), Gaps = 50/296 (16%)
Query: 12 PDARPLPSNINRKIWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEITGTSCLTFFEALNS 71
P +PLP ++ I T E F T E+ RL+ Y +TC+ TG+S LT EA
Sbjct: 11 PLVKPLPGE--EPLFTIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEE 68
Query: 72 EEEQFQYVEKMFPLKLREPVAKFIHFNEIRRLDMLVEQVYARFKNDYFPGETVYLRKSKQ 131
E+E + +++ FP + V + +H N L+ LV+ + Y GE K+
Sbjct: 69 EQEVAELLKEEFPAWYEKLVLEMVHHN-TASLEKLVDTAWLEIMTKYAVGEECDFEVGKE 127
Query: 132 -----------------------------DSSHDDAEKXXXXXXXXXXXKIYIIKEKAQF 162
DS D E + + +++ +
Sbjct: 128 KMLKVKIVKIHPLEKVDEEATEKKSDGACDSPSSDKENSSQIAQDHQKKETVVKEDEGRR 187
Query: 163 NAVIDRDTRQ-----------ELVPAHAKYMLQ----EAQGSTSIVAD--EDQIYRDRSC 205
++ DR R E A K++ + Q I+++ D + R
Sbjct: 188 ESINDRARRSPRKLPTSLKKGERKWAPPKFLPHKYDVKLQNEDKIISNVPADSLIRTERP 247
Query: 206 FTKHLIKCFCKITLRRASTKMGAPWCVKDEYLPIYNLTLTWPESML-KYKEDYVDP 260
K +++ F + RA T APW V+DE + Y+L + + +L YK ++P
Sbjct: 248 PNKEIVRYFIRHNALRAGTGENAPWVVEDELVKKYSLPSKFSDFLLDPYKYMTLNP 303
>Hs14670390 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1483
Score = 63.2 bits (152), Expect = 2e-09
Identities = 67/296 (22%), Positives = 114/296 (37%), Gaps = 50/296 (16%)
Query: 12 PDARPLPSNINRKIWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEITGTSCLTFFEALNS 71
P +PLP ++ I T E F T E+ RL+ Y +TC+ TG+S LT EA
Sbjct: 11 PLVKPLPGE--EPLFTIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEE 68
Query: 72 EEEQFQYVEKMFPLKLREPVAKFIHFNEIRRLDMLVEQVYARFKNDYFPGETVYLRKSKQ 131
E+E + +++ FP + V + +H N L+ LV+ + Y GE K+
Sbjct: 69 EQEVAELLKEEFPAWYEKLVLEMVHHN-TASLEKLVDTAWLEIMTKYAVGEECDFEVGKE 127
Query: 132 -----------------------------DSSHDDAEKXXXXXXXXXXXKIYIIKEKAQF 162
DS D E + + +++ +
Sbjct: 128 KMLKVKIVKIHPLEKVDEEATEKKSDGACDSPSSDKENSSQIAQDHQKKETVVKEDEGRR 187
Query: 163 NAVIDRDTRQ-----------ELVPAHAKYMLQ----EAQGSTSIVAD--EDQIYRDRSC 205
++ DR R E A K++ + Q I+++ D + R
Sbjct: 188 ESINDRARRSPRKLPTSLKKGERKWAPPKFLPHKYDVKLQNEDKIISNVPADSLIRTERP 247
Query: 206 FTKHLIKCFCKITLRRASTKMGAPWCVKDEYLPIYNLTLTWPESML-KYKEDYVDP 260
K +++ F + RA T APW V+DE + Y+L + + +L YK ++P
Sbjct: 248 PNKEIVRYFIRHNALRAGTGENAPWVVEDELVKKYSLPSKFSDFLLDPYKYMTLNP 303
>CE27187 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1427
Score = 58.5 bits (140), Expect = 6e-08
Identities = 38/123 (30%), Positives = 63/123 (50%), Gaps = 5/123 (4%)
Query: 13 DARPLPSNINRK--IWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEITGTSCLTFFEALN 70
+ + +P + R ++Y + T E FLT+ E+ R+ ++C +T S LT+FEA+
Sbjct: 25 EPQSVPDGVTRDTPVFYCKATKEVFLTHEEYFNRMILLNSTAWSCSLTRKSNLTYFEAIA 84
Query: 71 SEEEQFQYVEKMFPLKLREPVAKFIH-FNEIRRLDMLVEQVYARFKNDYFPGETV-YLRK 128
SE E Q + FP L P+ +H + R + LV +Y K+ +F E V Y K
Sbjct: 85 SEREAEQELCN-FPTALEIPITLIVHKYTNRGRFEDLVNDIYHILKDRFFNNEEVAYAEK 143
Query: 129 SKQ 131
S++
Sbjct: 144 SRK 146
>Hs7304919 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1674
Score = 52.4 bits (124), Expect = 4e-06
Identities = 35/112 (31%), Positives = 55/112 (48%), Gaps = 6/112 (5%)
Query: 13 DARPLPSNINRKIWYIQETGEWFLTYAEFLQRLDFYRRHYFTCEITGTSCLTFFEALNSE 72
D RP + +++Y + T E F Y +F +R ++C +TG LT+ EAL SE
Sbjct: 167 DLRP-----DEEVFYCKVTNEIFRHYDDFFERTILCNSLVWSCAVTGRPGLTYQEALESE 221
Query: 73 EEQFQYVEKMFPLKLREPVAKFIHFNEIRRLDMLVEQVYARFKNDYFPGETV 124
++ Q ++ FP L PV RL + + ++A K+ YF ETV
Sbjct: 222 KKARQNLQS-FPEPLIIPVLYLTSLTHRSRLHEICDDIFAYVKDRYFVEETV 272
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,326,179
Number of Sequences: 60738
Number of extensions: 2706024
Number of successful extensions: 9491
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9464
Number of HSP's gapped (non-prelim): 15
length of query: 1119
length of database: 30,389,216
effective HSP length: 117
effective length of query: 1002
effective length of database: 23,282,870
effective search space: 23329435740
effective search space used: 23329435740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)