ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0561 good R KOG0955 General function prediction only PHD finger protein BR140/LIN-49
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0561 195965 191451 -1505
(1505 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL131c [R] KOG0955 PHD finger protein BR140/LIN-49 834 0.0
SPAC3H1.12c [R] KOG0955 PHD finger protein BR140/LIN-49 125 7e-28
Hs7662304 [R] KOG0957 PHD finger protein 72 9e-12
At2g31640 [BK] KOG1080 Histone H3 (Lys4) methyltransferase compl... 69 6e-11
Hs20555413 [R] KOG0955 PHD finger protein BR140/LIN-49 65 6e-10
At3g14740 [R] KOG0955 PHD finger protein BR140/LIN-49 61 2e-08
Hs7662006 [R] KOG0954 PHD finger protein 60 3e-08
At1g05830_2 [BK] KOG1080 Histone H3 (Lys4) methyltransferase com... 60 3e-08
7298854 [R] KOG0956 PHD finger protein AF10 59 6e-08
Hs4757726 [R] KOG0956 PHD finger protein AF10 58 1e-07
Hs4757866 [R] KOG0955 PHD finger protein BR140/LIN-49 57 2e-07
Hs19923609 [R] KOG0954 PHD finger protein 57 2e-07
Hs5174577 [R] KOG0956 PHD finger protein AF10 57 2e-07
Hs15295343 [R] KOG0955 PHD finger protein BR140/LIN-49 57 3e-07
7304241 [R] KOG0955 PHD finger protein BR140/LIN-49 57 3e-07
YPR031w [R] KOG0955 PHD finger protein BR140/LIN-49 56 4e-07
ECU09g1850 [R] KOG0955 PHD finger protein BR140/LIN-49 55 8e-07
Hs11321642 [R] KOG0955 PHD finger protein BR140/LIN-49 54 1e-06
CE26433 [R] KOG0957 PHD finger protein 54 1e-06
7291926 [R] KOG0954 PHD finger protein 52 6e-06
At3g61740 [BK] KOG1080 Histone H3 (Lys4) methyltransferase compl... 52 7e-06
7295705 [R] KOG0957 PHD finger protein 52 9e-06
>YGL131c [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1403
Score = 834 bits (2155), Expect = 0.0
Identities = 485/1372 (35%), Positives = 734/1372 (53%), Gaps = 121/1372 (8%)
Query: 24 RRRTATKNVSYNEKEADIALAKKIKQLEKANSSKQKSEKGETIKKNGIQKKANNGXXXXX 83
RRR A KNV+YNE E D L ++I+ EK+ + K K +T + K +
Sbjct: 11 RRREAAKNVNYNEMEIDTKLVQQIQIAEKSGA-KTKGSNSQTPRNC----KRTSNPASRN 65
Query: 84 XXXXXXXXLQDKNTPWNFIPSLPNSFKKYARFSTMLDIDEMTVDVSKQLLLSDGSAVLKK 143
L DKNT WNFIP+LP SF+K +RFS +LD+D+ +D+ K L + S +L
Sbjct: 66 EKFKYQKFLHDKNTCWNFIPTLPPSFRKNSRFSNILDLDDAMIDLKKMSLFNTESVLLSA 125
Query: 144 DEHIFMVSEPPGEPYYIGRIVEFVPKKEFRSLISRSLHLATSFPAIYFQLKMNWYYRPRD 203
++ I+M+SEP GEPYY+GR+V FV K EF + I ++ + FPA +FQ++MNW+YRPRD
Sbjct: 126 NDTIYMISEPAGEPYYVGRVVNFVSKPEFSNTIHEAIKTTSVFPAKFFQVRMNWFYRPRD 185
Query: 204 IQERTNSTSSRMLYASLHNDVCPIYSFRGKCNVKFQKE-FTSIDQLTEYVSRPNCFYFNQ 262
IQE N+ + R++YASLH D+CPI S+RGKC++ + E F + E + RPN FYF++
Sbjct: 186 IQEHVNTFNPRLVYASLHQDICPISSYRGKCSIFHKDEVFDVLPNEKECIIRPNIFYFDE 245
Query: 263 LFDRYTLKYYQMEKTDQMAVRVASDLPYFKILTSKFPFIFYEDKFPLDNLLTKYVCGK-- 320
LFDRYTLKYY++ TD++ + S P+ +L +F +I+ E K+PL+N+L KYV +
Sbjct: 246 LFDRYTLKYYKVYSTDKILNKWNSKSPFLYVLNRRFRYIYTEPKYPLENVLKKYVFHELE 305
Query: 321 ----RTEDQSWDLRCGECRDWCHQSSSIKCDDCKISIHLWCMDPPLEKKPAKGVVWICSN 376
D WD RC C++WC Q S+ CD+C + HL+CMDPPL++KP K VVW C +
Sbjct: 306 VNELSPADYQWDKRCQFCKEWCIQKESLSCDECGVCAHLYCMDPPLDRKPNKDVVWTCFS 365
Query: 377 CVGK-QNNQEHITRDKEWEGIE----SSVERLTESLAS---IRDFNTNRENWWFQYLGED 428
C+ K Q ++ R E + +E SV + E ++S + N EN WFQYLG
Sbjct: 366 CLQKQQGTKDSHVRFLEEQALELDFIRSVRQKIEEISSKAIKENVGYNTENCWFQYLGIY 425
Query: 429 MCNHLGDPLFDDYIAPFPWKKSRVSLQKGQWSNCNQQ--WVEDPY--SNKPGERGTSASV 484
+H+GD L D P+P+K SRV + K QW+ CN W + Y +N ERG++ +
Sbjct: 426 SISHIGDALNDSMFFPYPFKPSRVGV-KYQWNGCNHNVPWRRNSYISANSEEERGSTKTS 484
Query: 485 EGLWIVNNEKMAESELDEYVKRCKSTIPGNLEVQPEACNFIDIILKLLMQNDYNSEISFL 544
E W+++ K+ +L EY+++CKS I L V+ E CNFID++LK L+ +Y++ +F
Sbjct: 485 ELAWVLDASKITTRKLSEYIEQCKSEICPILNVRGETCNFIDVVLKNLLFTNYDTAEAFK 544
Query: 545 KATEIITRESLKEPTLSQEEIKKFEEGVSLYGSELHPVCKHVGTQSMSMIVRYYYYWKKT 604
K ++R+ LKEP+ + EI+KFEE V +GSEL PVC++VGTQ MSMIVR+YY WKKT
Sbjct: 545 KCKRELSRKFLKEPSFTAVEIRKFEEAVEKFGSELRPVCEYVGTQPMSMIVRFYYNWKKT 604
Query: 605 PNGRRIWGNFKGRAKNRKKQSIXXXXXXXXXXXXXXXXXXRIPKKKAQSTQLLKHIDDSS 664
G + G +KN++K+ I ++ K+IDDSS
Sbjct: 605 ERGLTVRGKLSKLSKNKRKKEIA----------------------NHENDVETKYIDDSS 642
Query: 665 FDSEQISDVKKCFQCMFCSLDYSPLWYRVTGGSEDDHIHRRLTTGVNEKVSGSDSEKAKQ 724
FD+E++S + FQCMFC DYSP+WYRVTGGS+D+ I R+ TGVNEK SEK+
Sbjct: 643 FDTEKLSLAESSFQCMFCKTDYSPMWYRVTGGSDDEKIKIRMQTGVNEKT--EISEKSPA 700
Query: 725 VEKDNEKLNALCIRCARMWRRYGIRWSSPIDVLRQLYGSSSSSVQGAIKDLLEDNDEQAI 784
K NEKL ALCIRCARMWRRY I+W P++ LR++ G+ +S AI+ ++E+N+
Sbjct: 701 HSKKNEKLGALCIRCARMWRRYAIKWVPPLETLRKITGTCQNSFYSAIEGIIEENNTNKF 760
Query: 785 CCSTNQAFSKNLDWELVIDTESITKQRYAATDNPEKLLKMKRNTLSSQAQMNKSVKKLID 844
S QA +K L+WELV D+E I +QR NP +KMKR +++ Q+ K +
Sbjct: 761 TLSPFQAHNKLLEWELVQDSELIIRQRMKVYKNPNSFVKMKRYSMTFHTQLYKMAVRSYR 820
Query: 845 LNSIKPVNLEESLMGYISRIEAQIKRKEEIKFKRQKERALQEQLISEAHMKKSSKSAITT 904
N P ++ L E I+ +E++ +A+ EQ A K
Sbjct: 821 KNEFHPETMQRDL-------ELFIEDNKEVR------KAIPEQKPERAKNTKDEFPVNII 867
Query: 905 KQAQVLVTENKPQITEIQVKQQIVPYASPSVIRKLMPNGEFSINIEFETPTVAPNASITV 964
+Q+ + + + + AS + I K+ I I +T + + S++V
Sbjct: 868 RQSPGTIKTSDTSRNR-KCNDVFIEKASNNNIPKITNASNDLIEISIKTGG-SSSGSVSV 925
Query: 965 NPDFSMVKLSDPIISILRQDREKHMLTEDIXXXXXXXXXXXXXXXLDKSSGFVINKSYIP 1024
+ F VK + LR S V NK
Sbjct: 926 DKGFKFVKFDNKTFQRLR-----------------------------NSLKLVNNK---- 952
Query: 1025 VVKPFQSLRSEILQMYNRIS-------PN---YRHNVVSRKNAKKNPMQK---ASESSTM 1071
+ + ++ ++M N I+ PN Y + V+S ++K ++ S M
Sbjct: 953 -LPKYNEPSTKKIKMINDIALSNPLNEPNGASYNYTVISHSKETSVALEKYHDGNKPSKM 1011
Query: 1072 RDSSQKSNNTWSQTFSDPNENTLVNETRNFCRVCFSDYRSKTTNELSCSNCGMKVHASCY 1131
+ +T ++ +P+ N R FC VC + E+ C NCG+ VH CY
Sbjct: 1012 LEKDMILKHTKNKP-KNPDTAWANNSARTFCSVCKEKFNDNDNYEVVCGNCGLTVHYFCY 1070
Query: 1132 GIKCTN--QYHASLKGKLWLCDPCSNDRNPVVSTNYQCVLCSTRDIHNESAKKVTARSLP 1189
IK + + +LK WLCDPCSND NP++ST YQC +C T+D + + + + P
Sbjct: 1071 AIKLPKDMKKNTNLKTFKWLCDPCSNDLNPIISTTYQCSMCPTKDYDYDRYRSQSFKICP 1130
Query: 1190 NALKCTADGSWCHILCAIYRSMTKFASIETLQPIIGTEXXXXXXXXXXXXXXXXSGGLLV 1249
+ALKCT+ G+W H++C+++ K+ + +++QP + T +GG LV
Sbjct: 1131 DALKCTSLGTWVHLVCSLFNEDIKYGNGQSMQPALNTTAVLIKHSRFTCGVCRINGGGLV 1190
Query: 1250 KCQSCDDQFHPSCGADKEGFFFGFKKQVKSNVTNNSEISFVEDQKDYTASPVILCPKH-- 1307
KC C ++H +C + F F+K+ S T I V+ YT P+++C +H
Sbjct: 1191 KCNKCQYRYHITCAQNSSNFKLMFEKKNMSVDTTLPCIKDVKLNDTYTLRPILICDRHDI 1250
Query: 1308 -IRSPELVPFHYRVRDSDISLMKLFIREQKFDPQFETLSTIQLRIHAREQLR 1358
+ EL P Y+ + + +S ++ + R K + S ++LR + +LR
Sbjct: 1251 SLEGNELYPLSYKPQHT-LSYIEQYCRYYKCESDH---SLVELRYFEQLRLR 1298
>SPAC3H1.12c [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1131
Score = 125 bits (313), Expect = 7e-28
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 35/239 (14%)
Query: 140 VLKKDEHIFMVSEPPGEPYYIGRIVEFVPKKEFRSLISRSLHLATSFPAIYFQLKMNWYY 199
+++ ++ + + S PGEP+ I RI+ F ++ R +S +L Y +++NWY+
Sbjct: 104 LIQPNDFVLVNSPFPGEPFQIARIISF---EKSRPCVSTNL---------YDSVRLNWYF 151
Query: 200 RPRDIQERTNSTSSRMLYASLHNDVCPIYSFRGKCNVKFQKEFTSIDQLTEYVSRPNCFY 259
RPRDIQ T +R+L+AS+H+D+ I S + KC VK + + I+ L EY S+ +Y
Sbjct: 152 RPRDIQRHL--TDTRLLFASMHSDIYNIGSVQEKCTVKHRSQ---IENLDEYKSQAKSYY 206
Query: 260 FNQLFDRYTLKYYQMEKTDQMAVRVASDLPYFKILTSKFPFIFYEDKFP-LDNLLTKYVC 318
F++LFD+ K + + Q+ P ED F D ++T+Y
Sbjct: 207 FDRLFDQNINKVFDVVPVTQV---------------KNAPDDVLEDLFKNYDFIVTEYGK 251
Query: 319 GKRTEDQSWDLRCGECRDWCHQSSSIKCDDCKISIHLWCMDPPLEKKPAKGVVWICSNC 377
G+ ++ + C C+ WC S++C DCK H+ C+ PPL KKP G W C+ C
Sbjct: 252 GRALLNEPSN--CKVCKKWCAFDFSVQCADCKKYYHMDCVVPPLLKKPPHGFGWTCATC 308
>Hs7662304 [R] KOG0957 PHD finger protein
Length = 888
Score = 71.6 bits (174), Expect = 9e-12
Identities = 60/237 (25%), Positives = 87/237 (36%), Gaps = 45/237 (18%)
Query: 1053 SRKNAKKNPMQKASESSTMRDSSQKSNNTWSQTFSDPNENTLVNETRN-----------F 1101
S KK + S +S D + +N++ + + S NE++L+ E
Sbjct: 264 SEGGCKKKKSKVLSRNSA--DDEELTNDSLTLSQSKSNEDSLILEKSQNWSSQKMDHILI 321
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKG----KLWLCDPCSNDR 1157
C VC D + C NCG+ VH CYG+ + S + W CD C
Sbjct: 322 CCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDACKCGV 381
Query: 1158 NPVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASI 1217
+P C LC +D K T G W HI+CA+Y F I
Sbjct: 382 SP------SCELCPNQD---------------GIFKETDAGRWVHIVCALYVPGVAFGDI 420
Query: 1218 ETLQPIIGTEXXXXXXXXXXXXX----XXXSGGLLVKCQS--CDDQFHPSCGADKEG 1268
+ L+P+ TE G+ + C + C FH +C A KEG
Sbjct: 421 DKLRPVTLTEMNYSKYGAKECSFCEDPRFARTGVCISCDAGMCRAYFHVTC-AQKEG 476
>At2g31640 [BK] KOG1080 Histone H3 (Lys4) methyltransferase complex subunit SET1
and related methyltransferases
Length = 178
Score = 68.9 bits (167), Expect = 6e-11
Identities = 46/163 (28%), Positives = 61/163 (37%), Gaps = 26/163 (15%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC D + L C C M VHA CYG G LWLC+ C R
Sbjct: 29 CNVCHMDEEYENNLFLQCDKCRMMVHAKCYGEL------EPCDGALWLCNLC---RPGAP 79
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIETLQ 1221
+C LC + A+K T DG W H+ CAI+ T + ++ ++
Sbjct: 80 DMPPRCCLCPV---------------VGGAMKPTTDGRWAHLACAIWIPETCLSDVKKME 124
Query: 1222 PIIGTEXXXXXXXXXXXXXXXXSGGLLVKC--QSCDDQFHPSC 1262
PI G S G ++C SC +HP C
Sbjct: 125 PIDGVNKVSKDRWKLMCTICGVSYGACIQCSNNSCRVAYHPLC 167
>Hs20555413 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1205
Score = 65.5 bits (158), Expect = 6e-10
Identities = 59/252 (23%), Positives = 98/252 (38%), Gaps = 33/252 (13%)
Query: 1022 YIPVVKPFQSLRSEILQMYNRISPNYRHNVVSRKNAKKNPMQKASESSTMRDSSQKSNNT 1081
Y + KP + L +E+ + + V ++ + + A + D +K +
Sbjct: 138 YRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVSADTFELLVDRLEKES-- 195
Query: 1082 WSQTFSDPNENTLVNETRNFCRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHA 1141
+ ++ S + +L++E FC VC D + L C C + VH CYG+ +
Sbjct: 196 YLESRSSGAQQSLIDEDA-FCCVCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQ- 253
Query: 1142 SLKGKLWLCDPCSNDRNPVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWC 1201
WLC C + V C+LC + A K T+DG W
Sbjct: 254 ------WLCRCCLQSPSRPVD----CILCPNKG---------------GAFKQTSDGHWA 288
Query: 1202 HILCAIYRSMTKFASIETLQPIIGTEXXXXXXXXXXXXXXXXSG-GLLVKCQ--SCDDQF 1258
H++CAI+ FA+ L+PI G + G G ++C +C F
Sbjct: 289 HVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAF 348
Query: 1259 HPSCGADKEGFF 1270
H +C A + G F
Sbjct: 349 HVTC-AQRAGLF 359
>At3g14740 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 343
Score = 60.8 bits (146), Expect = 2e-08
Identities = 55/240 (22%), Positives = 92/240 (37%), Gaps = 26/240 (10%)
Query: 1043 ISPNYRHNVVSRKNAKKNPMQKASESSTMRDSSQKSNNTWSQTFS-DPNENTLVNETRNF 1101
++ Y+ V + KK+ + S D +++ + + + D ++ + +E
Sbjct: 93 LNVEYKPYVEEKSIEKKSTLNVESSLEVEEDDDKENIDPLGKGKALDLSDREVEDEDGIM 152
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC S + C C + VHASCYG N ++ W C C + +N
Sbjct: 153 CAVCQSTDGDPLNPIVFCDGCDLMVHASCYG----NPLVKAIPEGDWFCRQCLSSKNR-- 206
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIETLQ 1221
+ C LC+T+ A+K T DG W HI CA++ F E +
Sbjct: 207 EKIFSCCLCTTKG---------------GAMKPTNDGRWAHITCALFVPEVYFEDPEGRE 251
Query: 1222 PIIGTEXXXXXXXXXXXXXXXXSGGLLVKCQS--CDDQFHPSCGADKEGFFFGFKKQVKS 1279
I +E G +++C C FH +CG KE +++ KS
Sbjct: 252 GICCSEVLSKRWKDRCYLCKVRR-GCVIECSEMRCKLAFHVTCGL-KEDLCIEYREGKKS 309
>Hs7662006 [R] KOG0954 PHD finger protein
Length = 823
Score = 59.7 bits (143), Expect = 3e-08
Identities = 67/285 (23%), Positives = 104/285 (35%), Gaps = 55/285 (19%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC S + + + C C + VH +CYGI + WLC C V+
Sbjct: 203 CDVCRSPDSEEGNDMVFCDKCNVCVHQACYGI-------LKVPEGSWLCRSC------VL 249
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGS-WCHILCAIYRSMTKFASIETL 1220
QCVLC + ALK T G+ W H+ CA++ A E +
Sbjct: 250 GIYPQCVLCPKKG---------------GALKTTKTGTKWAHVSCALWIPEVSIACPERM 294
Query: 1221 QPIIGTEXXXXXXXXXXXXXXXXSGGLLVKC--QSCDDQFHPSCGADKEGFFFGFKKQVK 1278
+PI G ++C +SC FH +C F ++K
Sbjct: 295 EPITKISHIPPSRWALVCNLCKLKTGACIQCSIKSCITAFHVTCA-------FEHGLEMK 347
Query: 1279 SNVTNNSEISFVEDQKDYTASPVILCPKHIRSPELV-----PFHYRVRDSDISLMKLFIR 1333
+ + E+ F K Y C KH ++ + + P H S K +R
Sbjct: 348 TILDEGDEVKF----KSY-------CLKHSQNRQKLGEAEYPHHRAKEQSQAKSEKTSLR 396
Query: 1334 EQKF-DPQFETLSTIQLRIHAREQLRKMLSVSMDYSVSKESKITN 1377
QK + + E S +++ A E L+V Y+ K + +N
Sbjct: 397 AQKLRELEEEFYSLVRVEDVAAELGMPTLAVDFIYNYWKLKRKSN 441
>At1g05830_2 [BK] KOG1080 Histone H3 (Lys4) methyltransferase complex subunit SET1
and related methyltransferases
Length = 582
Score = 59.7 bits (143), Expect = 3e-08
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 24/126 (19%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC D + L C C M VH CYG + H G LWLC+ C R +
Sbjct: 41 CNVCHMDEEYENNLFLQCDKCRMMVHTRCYG---QLEPH---NGILWLCNLC---RPVAL 91
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIETLQ 1221
+C LC + A+K T DG W H+ CAI+ T ++ ++
Sbjct: 92 DIPPRCCLCPV---------------VGGAMKPTTDGRWAHLACAIWIPETCLLDVKKME 136
Query: 1222 PIIGTE 1227
PI G +
Sbjct: 137 PIDGVK 142
>7298854 [R] KOG0956 PHD finger protein AF10
Length = 657
Score = 58.9 bits (141), Expect = 6e-08
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 29/126 (23%)
Query: 1102 CRVCFSDYRSKTTNEL---SCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRN 1158
C VC SD R N L NC + VH +CYGI ++ W C C +
Sbjct: 8 CCVC-SDERGWPENPLVYCDGQNCTVAVHQACYGI-------VTVPTGPWYCRKCESQER 59
Query: 1159 PVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIE 1218
++ +C LC +RD ALK T + W H++CA+Y +F ++
Sbjct: 60 ---TSRVRCELCPSRD---------------GALKKTDNSGWAHVVCALYIPEVRFGNVT 101
Query: 1219 TLQPII 1224
T++PII
Sbjct: 102 TMEPII 107
>Hs4757726 [R] KOG0956 PHD finger protein AF10
Length = 1027
Score = 58.2 bits (139), Expect = 1e-07
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 29/126 (23%)
Query: 1102 CRVCFSDYRSKTTNELSCSN---CGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRN 1158
C VC SD R N L + C + VH +CYGI + W C C +
Sbjct: 25 CCVC-SDERGWAENPLVYCDGHGCSVAVHQACYGI-------VQVPTGPWFCRKCESQER 76
Query: 1159 PVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIE 1218
+ +C LC +D ALK T +G W H++CA+Y +FA++
Sbjct: 77 ---AARVRCELCPHKD---------------GALKRTDNGGWAHVVCALYIPEVQFANVS 118
Query: 1219 TLQPII 1224
T++PI+
Sbjct: 119 TMEPIV 124
>Hs4757866 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1214
Score = 57.4 bits (137), Expect = 2e-07
Identities = 51/203 (25%), Positives = 75/203 (36%), Gaps = 33/203 (16%)
Query: 1071 MRDSSQKSNNTWSQTFSDPNENTLVNETRNFCRVCFSDYRSKTTNELSCSNCGMKVHASC 1130
+ D +K + S DPN LV+E C +C + L C C ++VH C
Sbjct: 248 LMDRLEKESYFESHNKGDPN--ALVDEDA-VCCICNDGECQNSNVILFCDMCNLEVHQEC 304
Query: 1131 YGIKCTNQYHASLKGKLWLCDPCSNDRNPVVSTNYQCVLCSTRDIHNESAKKVTARSLPN 1190
YG+ + WLC C + V C LC +
Sbjct: 305 YGVPYIPEGQ-------WLCRRCLQSPSRAVD----CALCPNKG---------------G 338
Query: 1191 ALKCTADGSWCHILCAIYRSMTKFASIETLQPIIGTEXXXXXXXXXXXXXXXXSG-GLLV 1249
A K T DG W H++CA++ FA+ L+PI E G G +
Sbjct: 339 AFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACI 398
Query: 1250 KCQ--SCDDQFHPSCGADKEGFF 1270
+C +C FH +C A + G +
Sbjct: 399 QCHKANCYTAFHVTC-AQQAGLY 420
>Hs19923609 [R] KOG0954 PHD finger protein
Length = 509
Score = 57.4 bits (137), Expect = 2e-07
Identities = 52/216 (24%), Positives = 78/216 (36%), Gaps = 51/216 (23%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC S + C C + VH +CYGI + WLC C+ P
Sbjct: 206 CDVCQSPDGEDGNEMVFCDKCNICVHQACYGI-------LKVPEGSWLCRTCALGVQP-- 256
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGS-WCHILCAIYRSMTKFASIETL 1220
+C+LC + A+K T G+ W H+ CA++ S E +
Sbjct: 257 ----KCLLCPKKG---------------GAMKPTRSGTKWVHVSCALWIPEVSIGSPEKM 297
Query: 1221 QPIIGTEXXXXXXXXXXXXXXXXSGGLLVKC--QSCDDQFHPSCGADKEGFFFGFKKQVK 1278
+PI G ++C ++C FH +C D+ ++K
Sbjct: 298 EPITKVSHIPSSRWALVCSLCNEKFGASIQCSVKNCRTAFHVTCAFDR-------GLEMK 350
Query: 1279 SNVTNNSEISFVEDQKDYTASPVILCPKHI--RSPE 1312
+ + N E+ F K Y CPKH R PE
Sbjct: 351 TILAENDEVKF----KSY-------CPKHSSHRKPE 375
>Hs5174577 [R] KOG0956 PHD finger protein AF10
Length = 1093
Score = 57.0 bits (136), Expect = 2e-07
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 29/126 (23%)
Query: 1102 CRVCFSDYRSKTTNELSCSN---CGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRN 1158
C VC SD R N L + C + VH +CYGI + W C C +
Sbjct: 8 CCVC-SDERGWAENPLVYCDGHACSVAVHQACYGI-------VQVPTGPWFCRKCESQER 59
Query: 1159 PVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIE 1218
+ +C LC +D ALK T +G W H++CA+Y +FA++
Sbjct: 60 ---AARVRCELCPHKD---------------GALKRTDNGGWAHVVCALYIPEVQFANVL 101
Query: 1219 TLQPII 1224
T++PI+
Sbjct: 102 TMEPIV 107
>Hs15295343 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1214
Score = 56.6 bits (135), Expect = 3e-07
Identities = 51/203 (25%), Positives = 74/203 (36%), Gaps = 33/203 (16%)
Query: 1071 MRDSSQKSNNTWSQTFSDPNENTLVNETRNFCRVCFSDYRSKTTNELSCSNCGMKVHASC 1130
+ D +K + S DPN LV+E C +C + L C C + VH C
Sbjct: 248 LMDRLEKESYFESHNKGDPN--ALVDEDA-VCCICNDGECQNSNVILFCDMCNLAVHQEC 304
Query: 1131 YGIKCTNQYHASLKGKLWLCDPCSNDRNPVVSTNYQCVLCSTRDIHNESAKKVTARSLPN 1190
YG+ + WLC C + V C LC +
Sbjct: 305 YGVPYIPEGQ-------WLCRRCLQSPSRAVD----CALCPNKG---------------G 338
Query: 1191 ALKCTADGSWCHILCAIYRSMTKFASIETLQPIIGTEXXXXXXXXXXXXXXXXSG-GLLV 1249
A K T DG W H++CA++ FA+ L+PI E G G +
Sbjct: 339 AFKQTDDGRWAHVVCALWIPEVCFANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACI 398
Query: 1250 KCQ--SCDDQFHPSCGADKEGFF 1270
+C +C FH +C A + G +
Sbjct: 399 QCHKANCYTAFHVTC-AQQAGLY 420
>7304241 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1430
Score = 56.6 bits (135), Expect = 3e-07
Identities = 44/172 (25%), Positives = 62/172 (35%), Gaps = 30/172 (17%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C +C T L C C + VH CYG+ + WLC C + V
Sbjct: 286 CCICLDGECQNTNVILFCDMCNLAVHQDCYGVPYIPEGQ-------WLCRRCLQSPSKPV 338
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIETLQ 1221
+ CVLC A K T G W H++CA++ +FA+ L+
Sbjct: 339 N----CVLCPNAG---------------GAFKQTDHGQWAHVVCALWIPEVRFANTVFLE 379
Query: 1222 PIIGTEXXXXXXXXXXXXXXXXSG-GLLVKC--QSCDDQFHPSCGADKEGFF 1270
PI E G G ++C SC FH +C A + G +
Sbjct: 380 PIDSIETIPPARWRLTCYVCKEKGLGACIQCHRNSCYAAFHVTC-AQQAGLY 430
>YPR031w [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 748
Score = 56.2 bits (134), Expect = 4e-07
Identities = 42/185 (22%), Positives = 69/185 (36%), Gaps = 29/185 (15%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC + C C + VH CYGI + GK WLC C +N
Sbjct: 266 CAVCLGTDSDNLNTIVFCDGCDIAVHQECYGIIFIPE------GK-WLCRRCMISKNNFA 318
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIETLQ 1221
+ C++C + A K T GSW H +CA++ F+++ ++
Sbjct: 319 T----CLMCPSHT---------------GAFKQTDTGSWVHNICALWLPELYFSNLHYME 359
Query: 1222 PIIGTEXXXXXXXXXXXXXXXXSGGLLVKC--QSCDDQFHPSCGADKEGFFFGFKKQVKS 1279
PI G + G ++C ++C +H +C A + G + K
Sbjct: 360 PIEGVQNVSVSRWKLNCYICKKKMGACIQCFQRNCFTAYHVTC-ARRAGLYMSKGKCTIQ 418
Query: 1280 NVTNN 1284
+ +N
Sbjct: 419 ELASN 423
>ECU09g1850 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 402
Score = 55.1 bits (131), Expect = 8e-07
Identities = 39/172 (22%), Positives = 59/172 (33%), Gaps = 34/172 (19%)
Query: 1097 ETRNFCRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSND 1156
E +FC +C + + C C + VH SCYGI+ + + WLC C
Sbjct: 131 EPSSFCDICTKHTSTHNEALVVCQGCEICVHESCYGIQDLSSF--------WLCRKCIYG 182
Query: 1157 RNPVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFAS 1216
+ +C C + D K T+D W H+LCA++ F
Sbjct: 183 EYQI-----RCSFCISSD---------------GIFKQTSDNRWGHVLCAMFNRFLSFGH 222
Query: 1217 IETLQPIIGTEXXXXXXXXXXXXXXXXSGGLLVKCQ--SCDDQFHPSCGADK 1266
+ + PI GG + C C ++H C DK
Sbjct: 223 LLSKDPI----DVSSYLEESGCLFCNEFGGTAIHCSYFMCTRKYHVGCALDK 270
>Hs11321642 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1058
Score = 54.3 bits (129), Expect = 1e-06
Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 33/213 (15%)
Query: 1061 PMQKASESSTMRDSSQKSNNTWSQTFSDPNENTLVNETRNFCRVCFSDYRSKTTNELSCS 1120
P S + D +K ++ +Q + + +L++E C +C + L C
Sbjct: 179 PAVSQSMFEFLMDRFEKESHCENQKQGE--QQSLIDEDA-VCCICMDGECQNSNVILFCD 235
Query: 1121 NCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVVSTNYQCVLCSTRDIHNESA 1180
C + VH CYG+ + WLC C R + CVLC +
Sbjct: 236 MCNLAVHQECYGVPYIPEGQ-------WLCRHCLQSR----ARPADCVLCPNKG------ 278
Query: 1181 KKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIETLQPIIGTEXXXXXXXXXXXXX 1240
A K T D W H++CA++ FA+ ++PI G
Sbjct: 279 ---------GAFKKTDDDRWGHVVCALWIPEVGFANTVFIEPIDGVRNIPPARWKLTCYL 329
Query: 1241 XXXSG-GLLVKCQ--SCDDQFHPSCGADKEGFF 1270
G G ++C +C FH +C A K G +
Sbjct: 330 CKQKGVGACIQCHKANCYTAFHVTC-AQKAGLY 361
>CE26433 [R] KOG0957 PHD finger protein
Length = 613
Score = 54.3 bits (129), Expect = 1e-06
Identities = 68/331 (20%), Positives = 113/331 (33%), Gaps = 64/331 (19%)
Query: 1056 NAKKNPMQKASESSTMRDSSQKSNNTWSQTFSDPNENTLVNETRN-------------FC 1102
N +N + SE+ + DS + S+ S+ + E E+ C
Sbjct: 49 NPAENDAKTGSEADSGSDSQENSDEEESEDEENDEEEAESAESSEKPERTPSAEKDAVIC 108
Query: 1103 RVCFSDYRSKTTNE-LSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
VC + + L C CG+ VH SCYG AS W C+PC +
Sbjct: 109 GVCINQRNIVAAGDFLQCQKCGINVHESCYGTLPGGSDDAS-----WYCEPCLYG----L 159
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKFASIET-- 1219
+ C C +R + K+ R G W H +CA+Y +A T
Sbjct: 160 TLPPHCEFCPSR---FGAFKRADIR-----------GRWAHAICALYTHGVNYAQTHTRC 205
Query: 1220 ---LQPIIGTEXXXXXXXXXXXXXXXXSGGLLVKCQS--CDDQFHPSCGADKEGFFFGFK 1274
+ + G+ +C+S C + H +C A K G
Sbjct: 206 GVSWEHLDNNAHFGRRTCTACTDKIEARFGIASRCESGMCKEYLHVTC-AQKLGLL---- 260
Query: 1275 KQVKSNVTNNSEISFVEDQKDYTASPVILCPKHIRSPELVPFHYRVRDSDISLMKLFIRE 1334
V N++EI+ + C KH L P+ + D + S +
Sbjct: 261 --VDETDDNDTEIAVMR---------YFFCKKHTNRDNLKPYQRKFDDWEKSEARRITVN 309
Query: 1335 QKFD----PQFETLSTIQLRIHAREQLRKML 1361
++ + E +LR+ RE++ K++
Sbjct: 310 RRLRSGELEKNEQKEHKELRVKMREEIDKVI 340
>7291926 [R] KOG0954 PHD finger protein
Length = 3201
Score = 52.4 bits (124), Expect = 6e-06
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 29/123 (23%)
Query: 1102 CRVCFSDYRSKTTNELSCSNCGMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVV 1161
C VC S + + C NC + VH +CYGI ++ WLC CS P
Sbjct: 315 CDVCRSPDSEEANEMVFCDNCNICVHQACYGI-------TAIPSGQWLCRTCSMGIKP-- 365
Query: 1162 STNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGS-WCHILCAIYRSMTKFASIETL 1220
CVLC + A+K G W H+ CA++ ++ +
Sbjct: 366 ----DCVLCPNKG---------------GAMKSNKSGKHWAHVSCALWIPEVSIGCVDRM 406
Query: 1221 QPI 1223
+PI
Sbjct: 407 EPI 409
>At3g61740 [BK] KOG1080 Histone H3 (Lys4) methyltransferase complex subunit SET1
and related methyltransferases
Length = 902
Score = 52.0 bits (123), Expect = 7e-06
Identities = 81/370 (21%), Positives = 128/370 (33%), Gaps = 76/370 (20%)
Query: 1019 NKSYIPVVKPFQSLRSEILQMYNRI----SPNY--RHNVVSRKNAKKN--------PMQK 1064
N Y P K L IL+ N + SP+ RH K K + P++K
Sbjct: 394 NNYYCPDCKVQHELTPTILEEQNSVFKKQSPSEWERHTGCRAKKWKYSVRVKDTMLPLEK 453
Query: 1065 --ASESSTMRDSSQKSNNTWSQTFSDPNENTLVNETRNFCRVCFSDYRSKTTNELSCSNC 1122
A S+ ++ + E T C VC + + C+ C
Sbjct: 454 WIAEFSTYTLETQMLDKQKMLSLLEEKYEPVRAKWTTERCAVCRWVEDWEENKMIICNRC 513
Query: 1123 GMKVHASCYGIKCTNQYHASLKGKLWLCDPCSNDRNPVVSTNYQCVLCSTRDIHNESAKK 1182
+ VH CYG+ + + W+C C C LC +
Sbjct: 514 QVAVHQECYGVSKSQDLTS------WVCRACETP-----DIERDCCLCPVKG-------- 554
Query: 1183 VTARSLPNALKCT-ADGSWCHILCAIYRSMTKFASIETLQPIIGTEXXXXXXXXXXXXXX 1241
ALK + +G W H+ CA +R F + E ++P +G
Sbjct: 555 -------GALKPSDVEGLWVHVTCAWFRPEVGFLNHENMEPAVG-------LFKIPANSF 600
Query: 1242 XXSGGLLVKCQSCDDQFHPSCGADKEGFFFGFKKQVKSNVTNNSEISFV-EDQKDYTASP 1300
+ G V C C FH C A + G+ N E+S + Q D +
Sbjct: 601 LKTHGSCVHCCKCATHFHAMC-ASRAGY-------------NMEEVSLLFISQPDPDSVV 646
Query: 1301 VILCPKHI-RSPELVPFHY-RVRDSDISLMKLFIREQKFDPQ--------FETLSTIQLR 1350
V+ P + S L+ Y R + S + L K ++ F Q F++LS + R
Sbjct: 647 VVHTPSGVFGSRNLLQNQYGRAKGSRLVLTKK-MKLPGFQTQTQAEQSRVFDSLSAARCR 705
Query: 1351 IHAREQLRKM 1360
I++R +K+
Sbjct: 706 IYSRSNTKKI 715
>7295705 [R] KOG0957 PHD finger protein
Length = 1008
Score = 51.6 bits (122), Expect = 9e-06
Identities = 32/129 (24%), Positives = 51/129 (38%), Gaps = 25/129 (19%)
Query: 1099 RNFCRVCFSDYRSKTTNEL-SCSNCGMKVHASCYGIK---CTNQYHASLKGKLWLCDPCS 1154
+ C VC + RS NE+ C +CG+ VH CYG+ + +++ + W C+ C
Sbjct: 118 KRMCCVCLGE-RSDDVNEIVECDSCGVSVHEGCYGVSDNVSISSTNSTCSTEPWFCEACR 176
Query: 1155 NDRNPVVSTNYQCVLCSTRDIHNESAKKVTARSLPNALKCTADGSWCHILCAIYRSMTKF 1214
+ C LC + K T G W H++CA+Y F
Sbjct: 177 -----AGVSEPDCELCPNKG---------------GIYKETDVGKWVHLICALYVPGVAF 216
Query: 1215 ASIETLQPI 1223
+E L +
Sbjct: 217 GEVEQLSSV 225
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,344,809
Number of Sequences: 60738
Number of extensions: 3793406
Number of successful extensions: 13349
Number of sequences better than 1.0e-05: 22
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13275
Number of HSP's gapped (non-prelim): 58
length of query: 1505
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1386
effective length of database: 23,161,394
effective search space: 32101692084
effective search space used: 32101692084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)