ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0562 good A KOG2386 RNA processing and modification mRNA capping enzyme, guanylyltransferase (alpha) subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0562 196341 197738 466
(466 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL130w [A] KOG2386 mRNA capping enzyme guanylyltransferase (alp... 661 0.0
SPBC2F12.08c [A] KOG2386 mRNA capping enzyme guanylyltransferase... 213 5e-55
ECU09g0400 [A] KOG2386 mRNA capping enzyme guanylyltransferase (... 102 9e-22
At3g09100 [A] KOG2386 mRNA capping enzyme guanylyltransferase (a... 100 6e-21
At5g28210 [A] KOG2386 mRNA capping enzyme guanylyltransferase (a... 94 6e-19
Hs4506563 [A] KOG2386 mRNA capping enzyme guanylyltransferase (a... 87 4e-17
7292972 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alp... 85 2e-16
CE15578 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alp... 72 2e-12
At5g01290 [A] KOG2386 mRNA capping enzyme guanylyltransferase (a... 51 4e-06
>YGL130w [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 459
Score = 661 bits (1706), Expect = 0.0
Identities = 310/446 (69%), Positives = 377/446 (84%), Gaps = 2/446 (0%)
Query: 4 NRVAPEIPGLRQPGQITNDIRMLMCKLLNSAKPANTFPGSQPVSFHLADIEEKLLAQDYY 63
+RVAPEIPGL QPG +T D++M++CKLLNS KP TFPGSQPVSF +D+EEKLLA DYY
Sbjct: 7 SRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYY 66
Query: 64 VCEKTDGLRALMLIMVNPVTKEQGCFMIDRENNYYMVNGFRFPCLPRANKKELLETLQDG 123
VCEKTDGLR LM I++NPVT EQGCFMIDRENNYY+VNGFRFP LP+ K+ELLETLQDG
Sbjct: 67 VCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDG 126
Query: 124 TLIDGELVMQTNPVTKLKELRYLMFDCLAVNGRSLVQSPTSSRLAHLGKEFFKPYYDLRS 183
TL+DGELV+QTNP+TKL+ELRYLMFDCLA+NGR L QSPTSSRLAHLGKEFFKPY+DLR+
Sbjct: 127 TLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRA 186
Query: 184 YFPDRCSTFPFKISMKHMNFSYDLAKVAKTLDSLPHVSDGLIFTPVQAAYHIGGKDSYLL 243
+P+RC+TFPFKISMKHM+FSY L KVAK+LD LPH+SDGLIFTPV+A Y GGKDS LL
Sbjct: 187 AYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGGKDSLLL 246
Query: 244 KWKPEVENTVDFKLIIEPPVVEDKSLPKSDKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQ 303
KWKPE ENTVDFKLI++ P+VED SLPK D+NR+YYNYDVKP+F LYVWQGG DVN+R++
Sbjct: 247 KWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLK 306
Query: 304 DFEQPFTKSDLELLERTYRKFAEIEIDDKQWNELKAMEEPLNGRIVECSKDQESGAWKLL 363
F+QPF + + E+LERTYRKFAE+ + D++W LK +E+PLNGRIVEC+K+QE+GAW++L
Sbjct: 307 HFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEML 366
Query: 364 RFRDDKLNGNHVSVVQKVLESIGDSVSLDDLEQVVDEMRSRWKEREQGLK--NAQKQFNH 421
RFRDDKLNGNH SVVQKVLESI DSVSL+DLE++V +++ W ER + + + +
Sbjct: 367 RFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSGRPLPSQ 426
Query: 422 QASARSSLSQQHSTEPEQSQDQPKYV 447
+A S S+ ++P + +PKYV
Sbjct: 427 SQNATLSTSKPVHSQPPSNDKEPKYV 452
>SPBC2F12.08c [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 402
Score = 213 bits (542), Expect = 5e-55
Identities = 142/407 (34%), Positives = 214/407 (51%), Gaps = 53/407 (13%)
Query: 10 IPGLRQPGQITNDIRMLMCKLLNSAKPANTFPGSQPVSF---HLADIEEKLLAQDYYVCE 66
+PG+ P ++ + KLL ++ +TFPGSQPVSF HL ++EK +Y+VCE
Sbjct: 13 VPGVLAPRDDVRVLKTRIAKLLGTSP--DTFPGSQPVSFSKKHLQALKEK----NYFVCE 66
Query: 67 KTDGLRALMLIMVNPVTKEQ-GCFMIDRENNYYMVNGFRFPCL-PRANKKELLETLQDGT 124
K+DG+R L+ + +P + + ++ DR+ N+Y V +P ++ KK ++TL
Sbjct: 67 KSDGIRCLLYMTEHPRYENRPSVYLFDRKMNFYHVEKIFYPVENDKSGKKYHVDTL---- 122
Query: 125 LIDGELVMQTNPVTKLKELRYLMFDCLAVNGRSLVQSPTSSRLAHLGKEFFKPYYDLRSY 184
+DGELV+ P K K+LRYL+FDCLA +G + RL K KP +
Sbjct: 123 -LDGELVLDIYPGGK-KQLRYLVFDCLACDGIVYMSRLLDKRLGIFAKSIQKPLDEYTKT 180
Query: 185 FPDRCSTFPFKISMKHMNFSYDLAKVA-KTLDSLPHVSDGLIFTPVQAAYHIGGKDSYLL 243
+ FPF S+K M + + K+ + + L H +DGLIFT + Y + G D LL
Sbjct: 181 HMRETAIFPFLTSLKKMELGHGILKLFNEVIPRLRHGNDGLIFTCTETPY-VSGTDQSLL 239
Query: 244 KWKPEVENTVDFKLIIEPPVVEDKSLPKSDKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQ 303
KWKP+ NT+DF L +E E+ + +Y P F L VW+G N
Sbjct: 240 KWKPKEMNTIDFMLKLEFAQPEEGDI----------DYSAMPEFQLGVWEGRN------- 282
Query: 304 DFEQPFTKSDLELLERTYRKFAEIEIDDKQWNELKAMEEPLNGRIVECSKDQESGAWKLL 363
Y FA + +D+K+W +LK+ PL+ RIVEC D E+ W+ L
Sbjct: 283 ----------------MYSFFAFMYVDEKEWEKLKSFNVPLSERIVECYLDDEN-RWRFL 325
Query: 364 RFRDDKLNGNHVSVVQKVLESIGDSVSLDDLEQVVDEMRSRWKEREQ 410
RFRDDK + NH+S V+ VL+SI D VS +DL + + +R + R++
Sbjct: 326 RFRDDKRDANHISTVKSVLQSIEDGVSKEDLLKEMPIIREAYYNRKK 372
>ECU09g0400 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 364
Score = 102 bits (255), Expect = 9e-22
Identities = 109/427 (25%), Positives = 177/427 (40%), Gaps = 100/427 (23%)
Query: 12 GLRQPGQITNDIRMLMCKLLNSAKPANT--FPGSQPVSFHLADIEEKLLAQDYYVCEKTD 69
G + P I +R + + L +P + F G PV+ L +I LL D+ VCEK+D
Sbjct: 7 GNKVPPDIAEALRTKIYEELCITEPRSRERFVGCHPVTLTLDNIG-LLLNNDFLVCEKSD 65
Query: 70 GLRALMLIMVNPVTKEQGCF---MIDRENNYYMVNGFRFPCLPRANKKELLETLQDGTLI 126
G+RAL+L VT+E G F DR N++Y ++ FP L+
Sbjct: 66 GVRALLL-----VTEEMGAFRGYFYDRRNDFYELHT-SFPFCSTV-------------LV 106
Query: 127 DGELVMQTNPVTKLKELRYLMFDCLAVNG-----------------------RSLVQSPT 163
DGE++++ V Y +FDCL G +S+ ++ T
Sbjct: 107 DGEVLLEDGTVAT-----YAIFDCLIYEGVPQIAKNLYKRLGYAQMFVERMEKSMERTKT 161
Query: 164 SSRLAHLGKEFFKPYYDLRSYFPDRCSTFPFKISMKHMNFSYDLAKVAKTLDSLPHVSDG 223
+ G+E + ++ S R + +K M SY ++ K + L H +DG
Sbjct: 162 LQKEDEDGRERKRVSIEIDSGESSRIHFY-----VKQMLKSYGFWEIYKKIPELKHGNDG 216
Query: 224 LIFTPVQAAYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSLPKSDKNRFYYNYDV 283
LIFTP Y + GK +LKWKP NT+DF+ + +L S K +D
Sbjct: 217 LIFTPADEPYSV-GKRGAILKWKPASLNTIDFRAVKHKKWSRVYNLVCSGKRGKDVVFDC 275
Query: 284 KPLFHLYVWQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAEIEIDDKQWNELKAMEEP 343
+ G +++ +I +F + D W+ ++E
Sbjct: 276 -------FFCSGEEIDGKICEF--------------------LYDCDGYYWD----LDEL 304
Query: 344 LNGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGDSVSLDDLEQVVDEMRS 403
+ + G WKL + R DK N++ VV +LES+ D+++++ L MR
Sbjct: 305 V----------LKKGGWKLYKIRTDKDTPNNIRVVCNILESLRDNLTIEKLSTFYSVMRE 354
Query: 404 RWKEREQ 410
K RE+
Sbjct: 355 NSKRREK 361
>At3g09100 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 653
Score = 100 bits (248), Expect = 6e-21
Identities = 94/330 (28%), Positives = 143/330 (42%), Gaps = 54/330 (16%)
Query: 56 KLLAQDYYVCE-KTDGLRALMLIMVNPVTKEQGCFMIDRENNYYMVNGFRFPCLPRANKK 114
+LL Q YY K DG R +ML+ + GC+++DR + V RFP R +
Sbjct: 353 QLLRQRYYYATWKADGTRYMMLLTTD------GCYIVDRSFRFRRVQ-MRFPF--RHPTE 403
Query: 115 ELLETLQDGTLIDGELVMQTNPVTKLKELRYLMFDCLAVNGRSLVQSPTSSRLAHLGKEF 174
+ + + TL+DGE+++ T P + +E RYL++D +A+NG+S+V+ P R L KE
Sbjct: 404 GISDKVHHFTLLDGEMIIDTLPDKQKQERRYLIYDMVAINGQSVVERPFYERWKMLEKEV 463
Query: 175 FKP--YYDLRSYFPDRCSTFPFKISMKHMNFSYDLAKVAK-TLDSLPHVSDGLIFTPVQA 231
P + RS+ R PF++ K + KV K + SL H +DGLIF
Sbjct: 464 IDPRNHEKARSHI-YRYDLEPFRVRRKDFWLLSAVEKVLKGFIPSLSHEADGLIFQGWDD 522
Query: 232 AYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSLPKSDKNRFYYNYDVKPLFHLYV 291
Y + LLKWK N+VD F Y D
Sbjct: 523 PY-VPRTHEGLLKWKYPEMNSVD----------------------FLYEQD--------- 550
Query: 292 WQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAEIEIDDKQWNELKAMEEPLNGRIVEC 351
+ G + + + ++ + + AE DD E +G+IVEC
Sbjct: 551 -ESGRGMLSLFERGKKKHMDGNSVVFRELQATNAETATDDSDPAE-------YSGKIVEC 602
Query: 352 SKDQESGAWKLLRFRDDKLNGNHVSVVQKV 381
S DQ+ W +R R DK N ++ +KV
Sbjct: 603 SWDQDEKVWVSMRVRVDKSTPNDINTFRKV 632
>At5g28210 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 625
Score = 93.6 bits (231), Expect = 6e-19
Identities = 105/374 (28%), Positives = 159/374 (42%), Gaps = 80/374 (21%)
Query: 40 FPGSQPVSFHLADIEEKLLAQDYYVCE-KTDGLRALMLIMVNPVTKEQGCFMIDRENNYY 98
FPGS P+S ++ LL Q YY K DG R +ML+ GC++++RE +
Sbjct: 293 FPGSHPLSLGREALQ--LLRQRYYYATWKADGTRYMMLLT------RDGCYLVNREYRFR 344
Query: 99 MVNGFRFPCLPRANKKELLETLQDGTLIDGELVMQT--NPVTKLKELRYLMFDCLAVNGR 156
V RFPC + ++ TL+DGE+V+ T T+ RYL++D +A+NG+
Sbjct: 345 RVQ-MRFPCEYEPSDYKV----HHYTLLDGEMVVDTIKEGETQRHVRRYLVYDLVAINGQ 399
Query: 157 SLVQSPTSSRLAHLGKEFFKPYYD---LRSYFPDRCSTFPFKISMKHMNFSYDLAKVA-- 211
+ + P S R L +E KP D +R ++ R PF + +K + K
Sbjct: 400 FVAERPFSERWNILERELIKPRNDEKKVRDHW-YRYDKEPFGVRIKAFCLLSAVEKKVFN 458
Query: 212 KTLDSLPHVSDGLIFTPVQAAYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSLPK 271
+ + L H SDGLIF Y + G + LLKWK T+DF
Sbjct: 459 ELIPLLSHESDGLIFQGWDNPY-VFGPNKDLLKWK--FVETLDF---------------- 499
Query: 272 SDKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAE---IE 328
LF + + + L L ER K E +E
Sbjct: 500 --------------LFDM-----------------DKYGRQMLFLQERGRMKLMEGFAVE 528
Query: 329 IDDKQW-NELKAMEEPLNGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGD 387
W N+L + G+IVECS D+E W LR R DK N + + V++ I D
Sbjct: 529 FRGDGWDNDLAS----YCGKIVECSWDKEKKVWVSLRIRVDKSKPNGIGTGRSVIKCIED 584
Query: 388 SVSLDDLEQVVDEM 401
++ + L + + E+
Sbjct: 585 DLTKEVLLKEIKEI 598
>Hs4506563 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 597
Score = 87.4 bits (215), Expect = 4e-17
Identities = 108/367 (29%), Positives = 163/367 (43%), Gaps = 78/367 (21%)
Query: 40 FPGSQPVSFHLADIEEKLL-AQDYYVCEKTDGLRALMLIMVNPVTKEQGCFMIDRENNYY 98
FPG+QPVS +I KLL + Y V K DG R +MLI T E FMIDR+N+ +
Sbjct: 268 FPGAQPVSMDKQNI--KLLDLKPYKVSWKADGTRYMMLI---DGTNE--VFMIDRDNSVF 320
Query: 99 MVNGFRFPCLPRANKKELLETLQDGTLIDGELVMQTNPVTKLKELRYLMFDCLAVNGRSL 158
V+ FP +K+L L + TL+DGE+++ V RYL++D + N + +
Sbjct: 321 HVSNLEFPF-----RKDLRMHLSN-TLLDGEMIIDR--VNGQAVPRYLIYDIIKFNSQPV 372
Query: 159 VQSPTSSRLAHLGKEFFKPYYD-LRSYFPDRCSTFPFKISMKHMNFSYDLAKVAKTLDS- 216
+ RL + +E P ++ +++ D+ PF + K +D+ K L+
Sbjct: 373 GDCDFNVRLQCIEREIISPRHEKMKTGLIDKTQE-PFSVRNKPF---FDICTSRKLLEGN 428
Query: 217 ----LPHVSDGLIFTPVQAAYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSLPKS 272
+ H DGLIF P Y G D +LKWKP N+VDF+L I E P
Sbjct: 429 FAKEVSHEMDGLIFQPT-GKYKPGRCDD-ILKWKPPSLNSVDFRLKITRMGGEGLLPPN- 485
Query: 273 DKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAEIEIDDK 332
+ LYV GG +E+P FA+I++
Sbjct: 486 -------------VGLLYV--GG---------YERP---------------FAQIKVT-- 504
Query: 333 QWNELKAMEEPLNGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGDSVSLD 392
ELK + +I+EC E+ +W +R R DK N + V SI + V+ +
Sbjct: 505 --KELKQYD----NKIIECK--FENNSWVFMRQRTDKSFPNAYNTAMAVCNSISNPVTKE 556
Query: 393 DLEQVVD 399
L + +D
Sbjct: 557 MLFEFID 563
>7292972 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 649
Score = 85.1 bits (209), Expect = 2e-16
Identities = 102/365 (27%), Positives = 159/365 (42%), Gaps = 76/365 (20%)
Query: 38 NTFPGSQPVSFHLADIEEKLLAQDYYVCEKTDGLRALMLIMVNPVTKEQGCFMIDRENNY 97
N FPG+QPVS +I+ +L Y V K DG R +MLI + DR ++
Sbjct: 301 NGFPGAQPVSMDRENIK-RLSEIPYRVSWKADGTRYMMLI-----DGRDEVYFFDRNHSC 354
Query: 98 YMVNGFRFPCLPRANKKELLETLQDGTLIDGELVMQTNPVTKLKELRYLMFDCLAVNGRS 157
+ V F + L E L DGTL+DGE+V+ + + + RYL++D + ++ R
Sbjct: 355 FQVENVTF-----VESRNLNEHL-DGTLVDGEMVL--DKIGETVTPRYLIYDIVRLSNRD 406
Query: 158 LVQSPT-SSRLAHLGKEFFKPYY--DLRSYFPDRCSTFPFKISMKHMNFSYDLAKVAKTL 214
+ P +RL ++ E P R F S++ +F +D+ A+ L
Sbjct: 407 VRDEPFYPNRLDYIKTEVIGPRILGMKHGIINQRLQAF----SVRGKDF-WDIWMSARLL 461
Query: 215 D-----SLPHVSDGLIFTPVQAAYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSL 269
+L H DGLIF P + Y G S + KWKP N+VDF+L K +
Sbjct: 462 GEKFSRTLAHEPDGLIFQPSKQPY-TAGTCSDVFKWKPHELNSVDFRL---------KII 511
Query: 270 PKSDKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAEIEI 329
+ + K + LYV GG+D P+ + ++R ++ E
Sbjct: 512 TERGEGLL-----TKKVGFLYV--GGHDA---------PYGR-----MQRLTKETRE--- 547
Query: 330 DDKQWNELKAMEEPLNGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGDSV 389
L+ RIVEC+ +Q G W +R R DK N N + + V++SI V
Sbjct: 548 --------------LDNRIVECTMNQ-FGNWDFMRERTDKKNPNSYNTARSVVDSIKHPV 592
Query: 390 SLDDL 394
+ + L
Sbjct: 593 TKEYL 597
>CE15578 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 585
Score = 71.6 bits (174), Expect = 2e-12
Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 29/245 (11%)
Query: 25 MLMCKLLNSAK-PANTFPGSQPVSFHLADIEEKLLAQD-YYVCEKTDGLRALMLIMVNPV 82
ML K+ N K FPG QPVS +I LL Q+ Y V K DG+R ++ I V
Sbjct: 269 MLQAKIKNLCKYNKQGFPGLQPVSLSRGNIN--LLEQESYMVSWKADGMRYIIYINDGDV 326
Query: 83 TKEQGCFMIDRENNYYMVNGFRFPCLPRANKKELLETLQDGTLIDGELVMQTNPVTKLKE 142
+ DR+N + + F N L+ETL D +I ++ + +
Sbjct: 327 ------YAFDRDNEVFEIENLDFVT---KNGAPLMETLVDTEVIIDKVEING---AMCDQ 374
Query: 143 LRYLMFDCLAVNGRSLVQSPTSSRLAHLGKEFFKPYYDLRS--YFPDRCSTFPFKISMKH 200
R L++D + N ++++ P R + E D+R+ + R +S++
Sbjct: 375 PRMLIYDIMRFNSVNVMKEPFYKRFEIIKTEII----DMRTAAFKTGRLKHENQIMSVRR 430
Query: 201 MNFSYDLAKVAKT-----LDSLPHVSDGLIFTPVQAAYHIGGKDSYLLKWKPEVENTVDF 255
+F YDL AK + + H DGLIF P + Y G D +LKWKP N+VDF
Sbjct: 431 KDF-YDLEATAKLFGPKFVQHVGHEIDGLIFQPKKTKYETGRCDK-VLKWKPPSHNSVDF 488
Query: 256 KLIIE 260
L +E
Sbjct: 489 LLKVE 493
>At5g01290 [A] KOG2386 mRNA capping enzyme guanylyltransferase (alpha) subunit
Length = 607
Score = 50.8 bits (120), Expect = 4e-06
Identities = 45/136 (33%), Positives = 64/136 (46%), Gaps = 10/136 (7%)
Query: 124 TLIDGELVMQTNPVTKLKELR--YLMFDCLAVNGRSLVQSPTSSRLAHLGKEFFKP--YY 179
TL+DGE+V+ T P + E R YL++D +A+NG S+V+ R +E P
Sbjct: 361 TLLDGEMVIDT-PTGEQGEARRRYLVYDMVAINGESVVERTFCERWNMFVREVIGPRAAE 419
Query: 180 DLRSYFPDRCSTFPFKISMKHMNFSYDLAKVAKTLDSLPHVSDGLIFTPVQAAYHIGGKD 239
LRS+ C + + S + T+ SL H +DGLIF Y +
Sbjct: 420 KLRSH----CYRYDLEPFAGFWLLSTVEKLLKNTIPSLSHEADGLIFQGWDDPY-VPRTH 474
Query: 240 SYLLKWKPEVENTVDF 255
LLKWK N+VDF
Sbjct: 475 KGLLKWKYAEMNSVDF 490
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,271,423
Number of Sequences: 60738
Number of extensions: 1313963
Number of successful extensions: 3937
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3912
Number of HSP's gapped (non-prelim): 13
length of query: 466
length of database: 30,389,216
effective HSP length: 110
effective length of query: 356
effective length of database: 23,708,036
effective search space: 8440060816
effective search space used: 8440060816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)