ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0618 good C KOG2258 Energy production and conversion Glycerophosphoryl diester phosphodiesterase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0618 217762 216797 -322
(322 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL206c [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 283 2e-76
SPAC4D7.02c [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 103 3e-22
CE21178 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 59 1e-08
CE24259 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 58 2e-08
CE11152 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 58 2e-08
Hs13236540 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 55 1e-07
CE28154 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 53 7e-07
CE13982 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 51 2e-06
At5g08030 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase 50 4e-06
>YPL206c [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 321
Score = 283 bits (725), Expect = 2e-76
Identities = 132/300 (44%), Positives = 201/300 (67%), Gaps = 5/300 (1%)
Query: 6 MLQVIGHRGFKAKYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDINTERVWDQN 65
M++++GHR FKA+YPENTLL +EKA+ AG++VIETDLQ+T DG +V+NHD +T R+WD+N
Sbjct: 1 MVEIVGHRAFKARYPENTLLAFEKAYAAGADVIETDLQMTSDGMVVVNHDSDTGRMWDKN 60
Query: 66 VVIGETNLDELLLLKSKINPEIRITTFKDALQWLKEHPTMKFMLDIKPTNDKVLLIKAIL 125
+VIGE+ +E+ L+ K + + + T K+ L W HP K MLDIK TN+K+++IK +
Sbjct: 61 LVIGESTWEEVKRLRCKEDGSLAMMTLKEILTWAVCHPGAKLMLDIKFTNEKIIMIKTFV 120
Query: 126 EMRAVVDDLDFWRQRLMFGLWQLDWYKYGVTTATLKGFKIVAILPFTAMATKFVEYSKSL 185
M V +DL FW++R+ +GLW LDWY +G+ T LK FK++ I +A++FV+ S +L
Sbjct: 121 IMLEVKNDLKFWQERITWGLWLLDWYDFGIETGVLKDFKVIVISLSLDIASQFVKRSLTL 180
Query: 186 SDDNYKLHGVSLHFINSWKPDFKKTVLPYLQENNLAVYLWTVNSEIDIKYISSMTITGII 245
+D +YKL G+S+HF++SW F+ +LP L +N++ VYLWTVN ID KY+ + I G I
Sbjct: 181 NDPHYKLFGISVHFVSSWTSQFRLRLLPVLMKNDIKVYLWTVNKPIDFKYLCELPIHGAI 240
Query: 246 VDDPVASVSIRDEYIRKAVP-----FVPPIFNSSEGFRLYLRLRVFEVAERILSSRWATV 300
DDP+ + + D + P FV P S +G R + ++V+ + +L S+W +
Sbjct: 241 TDDPIKARKLCDGHTVAKKPTAEKKFVAPSLASVDGLRFHAFIKVYNILCTLLYSKWVHI 300
>SPAC4D7.02c [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 319
Score = 103 bits (257), Expect = 3e-22
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 37/267 (13%)
Query: 2 TTSKMLQVIGHRG--------FKAKYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMN 53
T SK VI HRG +KAKYPENT+L +++A +AG++ +ETD++LTKD + +
Sbjct: 27 TFSKPPLVIAHRGKCLTYVYRYKAKYPENTILAFQQAVKAGADCVETDVRLTKDEVVCIL 86
Query: 54 HDINTERVWDQNVVIGETNLD-ELLLLKSKINPEIRITTFKDALQWLKEHPTMKFMLDIK 112
HD N RV+ +V + + + + + ++ P + T++ L L +HP + ++DIK
Sbjct: 87 HDRNLNRVFGVDVDVRDLDYELDNGHFRTIQEPHEPLPTYEQFLHELTKHPGVNLLVDIK 146
Query: 113 PTNDKVLLIKAILEMRAVVDDLDFWRQRLMFGLWQ------LDWYKYGVTTATLKGFKIV 166
P ND +++ + + M V DLDFW+ ++ F LW D Y + + GF
Sbjct: 147 PVNDLLIIPRMVDAMLRVNSDLDFWKDKVSFCLWSHRFIPACDRYAPSIPLYHI-GFN-- 203
Query: 167 AILPFTAMATKFVEYSKSLSDDNYKLHGVSLH---FINSWKPDFKKTVLPYLQENNLAVY 223
F FV + ++ GVS+ F+ DF + + V+
Sbjct: 204 ----FAYAERHFVMHP--------RVKGVSMAVALFLLPHSQDF----VDLVHAQGKQVF 247
Query: 224 LWTVNSEIDIKYISSMTITGIIVDDPV 250
WT+N+ I G++ DDPV
Sbjct: 248 AWTLNTPSSIYLALIRGCDGLLSDDPV 274
>CE21178 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 356
Score = 58.5 bits (140), Expect = 1e-08
Identities = 61/269 (22%), Positives = 114/269 (41%), Gaps = 36/269 (13%)
Query: 11 GHRGFKAKYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDINTERVWDQNVVIGE 70
GHRG +PEN++ + +A G+++IE D+ LTKDGK V+ HD + +R D I +
Sbjct: 67 GHRGAPKSFPENSMAGFAQAKADGADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRD 126
Query: 71 TNLDEL-------LLLKSKINPEIRITT--------FKDALQWLKEHPTMKFMLDIKPTN 115
EL ++ R+ T +D ++W E+ T + + D+K ++
Sbjct: 127 KTRAELDRCDISATFKRTAPGDHCRLATVSRERVPDMEDVVKWAVENNT-RMLFDVKDSD 185
Query: 116 DKV------LLIKAILEMRAVVDDLDFW--------RQRLMFGL-WQLDWYKYGVTTATL 160
+++ L K L +A+V W Q+++ GL W+L ++ Y
Sbjct: 186 NELVDQIANLFQKYNLYDKAIVCSFFPWVVYRIKKGDQKILTGLTWRLKFWSYHDIENIR 245
Query: 161 KGFKIVAILPFTAMATKFVEYSKSLSDDNYKLHGVSLHFINSWKPDFKKTVLPYLQENNL 220
+ + F + V K ++ G L N+ D + ++ + +
Sbjct: 246 PRYSGPKQMLFEMIDVAHVWLLKKVTP---WYLGADLLLTNNL--DISQALIMDQRRRGM 300
Query: 221 AVYLWTVNSEIDIKYISSMTITGIIVDDP 249
V +WTVN ++ ++ I+ D P
Sbjct: 301 RVAVWTVNDMAEMHWMLKTLNIPILTDYP 329
>CE24259 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 298
Score = 58.2 bits (139), Expect = 2e-08
Identities = 46/173 (26%), Positives = 82/173 (46%), Gaps = 31/173 (17%)
Query: 11 GHRGFKAKYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDINTERVWDQNVVIGE 70
GHRG +PEN++ + +A G+++IE D+ LTKDGK V+ HD + +R D I +
Sbjct: 67 GHRGAPKSFPENSMAGFAQAKADGADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRD 126
Query: 71 TNLDEL-------LLLKSKINPEIRITT--------FKDALQWLKEHPTMKFMLDIKPTN 115
EL ++ R+ T +D ++W E+ T + + D+K ++
Sbjct: 127 KTRAELDRCDISATFKRTAPGDHCRLATVSRERVPDMEDVVKWAVENNT-RMLFDVKDSD 185
Query: 116 DKV------LLIKAILEMRAVVDDLDFW--------RQRLMFGL-WQLDWYKY 153
+++ L K L +A+V W Q+++ GL W+L ++ Y
Sbjct: 186 NELVDQIANLFQKYNLYDKAIVCSFFPWVVYRIKKGDQKILTGLTWRLKFWSY 238
>CE11152 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 296
Score = 58.2 bits (139), Expect = 2e-08
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 5 KMLQVIGHRGFKAKYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDINTERVWDQ 64
K L GHRG + PENT+ +KA E G +++E D+ ++ DG ++ HD TER +
Sbjct: 29 KKLNFGGHRGSPKRAPENTIESLKKAKEDGCDLVEFDIHMSSDGVPLLMHDDTTERTGNA 88
Query: 65 NVVIGETNLDEL--LLLKSKINPEIRITTFKDALQWLKEHPTMKFMLDIKPTNDKVLLIK 122
+ + + +L ++L +I +A+ + E+ +K + D+K ND + L++
Sbjct: 89 KLKVEHSTWQQLEAVVLNPVNGVNAKIPRLNEAIDFCVEN-GLKMLFDMK--NDNLKLME 145
Query: 123 AILE 126
A+ E
Sbjct: 146 AVSE 149
>Hs13236540 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 256
Score = 55.5 bits (132), Expect = 1e-07
Identities = 55/241 (22%), Positives = 107/241 (43%), Gaps = 28/241 (11%)
Query: 35 SEVIETDLQLTKDGKIVMNHDINTERVWDQNVVIGETNLDELLLLKSKI----------- 83
S+++E D QLT+D +V++HD N R N +G + ++L L K K+
Sbjct: 5 SDLLELDCQLTRDRVVVVSHDENLCRQSGLNRDVGSLDFEDLPLYKEKLEVYFSPGHFAH 64
Query: 84 NPEIRITTFKDALQWLKEHPTMKFMLDIKPTNDKVLLIKAILEMRAVVDDLDFW--RQRL 141
+ R+ +D Q P ++IK N++++ A L R +++ W +
Sbjct: 65 GSDRRMVRLEDLFQ---RFPRTPMSVEIKGKNEELIREIAGLVRRYDRNEITIWASEKSS 121
Query: 142 MFGLWQLDWYKYGVTTATLKGFKI-----VAILPFTAMATKFVE-YSKSLSDDNYKLHGV 195
+ + + ++ +GF + + +LPF + KF + ++ + Y
Sbjct: 122 VMKKCKAANPEMPLSFTISRGFWVLLSYYLGLLPFIPIPEKFFFCFLPNIINRTYFPFSC 181
Query: 196 S-----LHFINSWKPDFKKTVLPYLQENNLAVYLWTVNSEIDIKYISSMTITGIIVDDPV 250
S L ++ W +K+++ +L+E + V W +N E D + S+ TG+I D P
Sbjct: 182 SCLNQLLAVVSKWL-IMRKSLIRHLEERGVQVVFWCLNEESDFEAAFSVGATGVITDYPT 240
Query: 251 A 251
A
Sbjct: 241 A 241
>CE28154 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 375
Score = 52.8 bits (125), Expect = 7e-07
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 11 GHRGFKAK-YPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDINTERVWDQNVVIG 69
GHRG PEN+L + G ++ E D+Q+T DG V+ HD NT RV + I
Sbjct: 122 GHRGSAHDDIPENSLEAFSAVKREGGQLAEMDIQITLDGVPVICHDANTVRVTGVDKDIS 181
Query: 70 ETNLDELLLLKSKINPEIRITTFKDALQWLKEHPTMKFMLDIKPTNDKVLLIKAILEMRA 129
N+ E L+ I + TF++A+ + + M + D+K D+ LL + +++M+
Sbjct: 182 TMNITEFRKLRF-TGTNISLPTFEEAVSYCVANDIM-MIWDVKNV-DENLLKQFVIQMKT 238
Query: 130 VVDDLDFWRQRLMFGLWQLDWYK 152
+ + + L+ G +D YK
Sbjct: 239 ----HNLYSKVLVSGFNPIDTYK 257
>CE13982 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 325
Score = 51.2 bits (121), Expect = 2e-06
Identities = 41/142 (28%), Positives = 70/142 (48%), Gaps = 8/142 (5%)
Query: 11 GHRGFKA-KYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDINTERVWDQNVVIG 69
GHRG PEN+L + G ++ E D+Q+T DG V+ HD NT RV + I
Sbjct: 72 GHRGSAHDNIPENSLEAFSAVKSEGGQLAEMDIQITMDGVPVICHDSNTVRVTGVDKEIS 131
Query: 70 ETNLDELLLLKSKINPEIRITTFKDALQWLKEHPTMKFMLDIKPTNDKVLLIKAILEMRA 129
N+ E L+ I + + TF++A+ + M + D+K D+ LL + ++++R
Sbjct: 132 AMNITEFRKLRF-IGTNVSLPTFEEAVAHCVANNIM-MIWDVKNV-DENLLKQFVIQIRT 188
Query: 130 VVDDLDFWRQRLMFGLWQLDWY 151
+ + + L+ G +D Y
Sbjct: 189 ----YNLYSKVLVSGFNPIDTY 206
>At5g08030 [C] KOG2258 Glycerophosphoryl diester phosphodiesterase
Length = 372
Score = 50.1 bits (118), Expect = 4e-06
Identities = 25/66 (37%), Positives = 37/66 (55%), Gaps = 5/66 (7%)
Query: 3 TSKMLQV-----IGHRGFKAKYPENTLLCYEKAHEAGSEVIETDLQLTKDGKIVMNHDIN 57
T K LQ + HRG + PE T Y +A E G++ IETD+ +KDG ++ +HD+N
Sbjct: 35 TKKPLQTSRPYNLAHRGSNGELPEETAPAYMRAIEEGADFIETDILSSKDGVLICHHDVN 94
Query: 58 TERVWD 63
+ D
Sbjct: 95 LDDTTD 100
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.323 0.138 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,944,581
Number of Sequences: 60738
Number of extensions: 718049
Number of successful extensions: 1720
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1709
Number of HSP's gapped (non-prelim): 11
length of query: 322
length of database: 30,389,216
effective HSP length: 106
effective length of query: 216
effective length of database: 23,950,988
effective search space: 5173413408
effective search space used: 5173413408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)