ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0667 good E KOG0622 Amino acid transport and metabolism Ornithine decarboxylase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0667 235478 236800 441
(441 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL184w [E] KOG0622 Ornithine decarboxylase 536 e-152
SPAC144.04c [E] KOG0622 Ornithine decarboxylase 365 e-101
Hs4505489 [E] KOG0622 Ornithine decarboxylase 328 1e-89
CE12114 [E] KOG0622 Ornithine decarboxylase 275 1e-73
7304113 [E] KOG0622 Ornithine decarboxylase 253 5e-67
Hs16506287 [E] KOG0622 Ornithine decarboxylase 247 3e-65
HsM7706220 [E] KOG0622 Ornithine decarboxylase 227 2e-59
Hs21361583 [E] KOG0622 Ornithine decarboxylase 227 2e-59
7304112 [E] KOG0622 Ornithine decarboxylase 170 4e-42
CE10982 [E] KOG0622 Ornithine decarboxylase 115 1e-25
At3g14390 [E] KOG0622 Ornithine decarboxylase 65 3e-10
At5g11880 [E] KOG0622 Ornithine decarboxylase 53 1e-06
>YKL184w [E] KOG0622 Ornithine decarboxylase
Length = 466
Score = 536 bits (1382), Expect = e-152
Identities = 258/415 (62%), Positives = 317/415 (76%), Gaps = 11/415 (2%)
Query: 35 LPHQQSHHKIFAALKEKIDSINHETCDAGDENSFFVCDLGEISRLRNYWTQILPRVTPFY 94
LPH+Q+H KIF ALK +I IN+ETCD G+ENSFF+CDLGE+ RL N W + LPR+ PFY
Sbjct: 54 LPHEQAHPKIFQALKARIGRINNETCDPGEENSFFICDLGEVKRLFNNWVKELPRIKPFY 113
Query: 95 AVKCNPNIEIIKRLASMSTNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKN 154
AVKCNP+ +++ LA + NFDCASK EI++VL+ + P+RI+YANPCK +SFIR+AA
Sbjct: 114 AVKCNPDTKVLSLLAELGVNFDCASKVEIDRVLSMNISPDRIVYANPCKVASFIRYAASK 173
Query: 155 GVKKSTFDNIDELYKIKKYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKE 214
V KSTFDN++EL+KIKK+HPES+LLLRI TDDS+AQCRLSTKYGCE+++V VLL+ +KE
Sbjct: 174 NVMKSTFDNVEELHKIKKFHPESQLLLRIATDDSTAQCRLSTKYGCEMENVDVLLKAIKE 233
Query: 215 LGLNLIGVSFHVGSGASDFSTVTQAVKDGRKVFDMAESR-GLPALKMLDVGGGYQFDTIT 273
LGLNL GVSFHVGSGASDF+++ +AV+D R VFD A + GLP LK+LDVGGG+QF++
Sbjct: 234 LGLNLAGVSFHVGSGASDFTSLYKAVRDARTVFDKAANEYGLPPLKILDVGGGFQFESFK 293
Query: 274 EVADVLNAALDYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKRNNSDSESMIYIND 333
E VL AL+ FFP V IAEPGRY I KR S++E+MIY ND
Sbjct: 294 ESTAVLRLALEEFFP--VGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTND 351
Query: 334 GVYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACN-------YKVSIWGPT 386
GVYGNMNCILFDHQEP PR LYH FHY D S++ A D+ N YKVSIWGPT
Sbjct: 352 GVYGNMNCILFDHQEPHPRTLYHNLEFHYDDFESTT-AVLDSINKTRSEYPYKVSIWGPT 410
Query: 387 CDGLDCVSKEYYMKYDLDIGDWVHFDNIGAYTCSAATPFNGFEQTVDIIFIDSAL 441
CDGLDC++KEYYMK+D+ +GDW +F +GAYT SAAT FNGFEQT DI++IDS L
Sbjct: 411 CDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSSAATQFNGFEQTADIVYIDSEL 465
>SPAC144.04c [E] KOG0622 Ornithine decarboxylase
Length = 432
Score = 365 bits (936), Expect = e-101
Identities = 185/403 (45%), Positives = 255/403 (62%), Gaps = 16/403 (3%)
Query: 40 SHHKIFAALKEKIDSINHETC--DAGDENSFFVCDLGEISRLRNYWTQILPRVTPFYAVK 97
S I A K I+ I + D ++FFV DL + R W LPRV PFYAVK
Sbjct: 39 SRQAIGEAFKNTIEEIERAAVRGEPADSDAFFVADLNGVYRQLLRWHAKLPRVQPFYAVK 98
Query: 98 CNPNIEIIKRLASMSTNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVK 157
CNP+ +++ L T FDCASK E+E++L GV P+RI+YANPCKA +++R+AA G+
Sbjct: 99 CNPDPKVLALLNKFGTGFDCASKGELEQILGLGVSPDRIVYANPCKAITYVRYAASKGIN 158
Query: 158 KSTFDNIDELYKIKKYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKELGL 217
TFDN DELYK+K++HP S LLLRI TDDS++ CRLS K+G LDD LL+ K L L
Sbjct: 159 LMTFDNADELYKVKQHHPNSRLLLRISTDDSNSLCRLSLKFGASLDDTGKLLDIAKSLEL 218
Query: 218 NLIGVSFHVGSGASDFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFDTITEVAD 277
N++GVSFHVGSG+ D S A++ R+VFD RG +LD+GGG+ D+ VAD
Sbjct: 219 NVVGVSFHVGSGSYDPSAFLDAIQRSRQVFDQGLERGF-NFDLLDIGGGFMNDSFDGVAD 277
Query: 278 VLNAALDYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKRNNSDSES-MIYINDGVY 336
++ +ALD +F + I+EPGR+ I KR D E M Y+NDGVY
Sbjct: 278 LIRSALDTYF----DPSIRVISEPGRFFVSSSFTLAVNVIAKRKLDDEEKVMYYVNDGVY 333
Query: 337 GNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVSKE 396
G++NCILFDHQ P RVL +RF Y D+ + + +C IWGPTCD LD ++ +
Sbjct: 334 GSLNCILFDHQHPVARVLKCGSRFVYNDLVGTGQHRC-------FIWGPTCDSLDVIAND 386
Query: 397 YYMKYDLDIGDWVHFDNIGAYTCSAATPFNGFEQTVDIIFIDS 439
++ Y+L++GDW++F++ GAYT +AA+ FNGF +T I+++D+
Sbjct: 387 AHLPYELNVGDWIYFEDAGAYTVAAASCFNGF-KTSRIVYLDT 428
>Hs4505489 [E] KOG0622 Ornithine decarboxylase
Length = 461
Score = 328 bits (841), Expect = 1e-89
Identities = 177/400 (44%), Positives = 242/400 (60%), Gaps = 36/400 (9%)
Query: 49 KEKIDSINHETCDAGDENSFFVCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKRL 108
K+ +D +E + D+++F+V DLG+I + W + LPRVTPFYAVKCN + I+K L
Sbjct: 21 KDILDQKINEVSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTL 80
Query: 109 ASMSTNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELY 168
A+ T FDCASK+EI+ V + GV PERIIYANPCK S I++AA NGV+ TFD+ EL
Sbjct: 81 AATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELM 140
Query: 169 KIKKYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVGS 228
K+ + HP+++L+LRI TDDS A CRLS K+G L +LLE KEL ++++GVSFHVGS
Sbjct: 141 KVARAHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGS 200
Query: 229 GASDFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFD-----TITEVADVLNAAL 283
G +D T QA+ D R VFDM G ++ +LD+GGG+ E+ V+N AL
Sbjct: 201 GCTDPETFVQAISDARCVFDMGAEVGF-SMYLLDIGGGFPGSEDVKLKFEEITGVINPAL 259
Query: 284 DYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKR-------------NNSDSESMIY 330
D +FP + S V IAEPGRY I K+ +S+ M Y
Sbjct: 260 DKYFPSD--SGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYY 317
Query: 331 INDGVYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGL 390
+NDGVYG+ NCIL+DH P + + K D Y SIWGPTCDGL
Sbjct: 318 VNDGVYGSFNCILYDHAHVKPLL--------------QKRPKPDEKYYSSSIWGPTCDGL 363
Query: 391 DCVSKEYYMKYDLDIGDWVHFDNIGAYTCSAATPFNGFEQ 430
D + + + ++ +GDW+ F+N+GAYT +AA+ FNGF++
Sbjct: 364 DRIVERCDLP-EMHVGDWMLFENMGAYTVAAASTFNGFQR 402
>CE12114 [E] KOG0622 Ornithine decarboxylase
Length = 422
Score = 275 bits (702), Expect = 1e-73
Identities = 151/386 (39%), Positives = 219/386 (56%), Gaps = 37/386 (9%)
Query: 64 DENSFFVCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKRLASMSTNFDCASKSEI 123
+++SF + DL +I W + LP + PFYAVKCN ++ +I+ LAS+ FDCASK EI
Sbjct: 38 NDSSFMLVDLDKIIERFQLWKRELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEI 97
Query: 124 EKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPESELLLRI 183
+ V+ GV ERIIYANPCK SFI A VK TFDN +EL KI K HP +E++LRI
Sbjct: 98 DIVMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRI 157
Query: 184 VTDDSSAQCRLSTKYGCE-LDDVPVLLETVKELGLNLIGVSFHVGSGASDFSTVTQAVKD 242
D +A C L+ K+G + + P LL+T E G+N++G+SFHVGSG +D S A++
Sbjct: 158 AVSDPTATCPLNLKFGADPIIAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQH 217
Query: 243 GRKVFDMAESRGLPALKMLDVGGGY----QFDTITEVADVLNAALDYFFPQETHSDVSFI 298
+ + ++ E G + ++D+GGG+ + ++A+ + ALD FFP ++ I
Sbjct: 218 AKNLCEIGEGLGF-KMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPD---TNKRLI 273
Query: 299 AEPGRYXXXXXXXXXXXXI------------GKRNNSDSESMIYINDGVYGNMNCILFDH 346
AEPGR+ I ++ +D M YINDGVYG+ NCILFDH
Sbjct: 274 AEPGRFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNCILFDH 333
Query: 347 QEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMKYDLDIG 406
P L+ +R + +IWGPTCD LD V + M +++G
Sbjct: 334 AHPIGSPLFDTDRNE---------------KFMSTIWGPTCDSLDLVEDKKLMP-KMNVG 377
Query: 407 DWVHFDNIGAYTCSAATPFNGFEQTV 432
+W+++ ++GAYT +AAT FNGF + V
Sbjct: 378 EWLYYPDMGAYTLAAATTFNGFSKPV 403
>7304113 [E] KOG0622 Ornithine decarboxylase
Length = 394
Score = 253 bits (645), Expect = 5e-67
Identities = 144/389 (37%), Positives = 211/389 (54%), Gaps = 29/389 (7%)
Query: 58 ETCDAGD-ENSFFVCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKRLASMSTNFD 116
E CD + + +CDL + R W ++LPR+ PFYAVKCN + +++ LA + FD
Sbjct: 22 EECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLAQLGAGFD 81
Query: 117 CASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPE 176
CASK+E++ VL V PERII+ANPC+ S + +A ++ V T DN E+YK+ ++P
Sbjct: 82 CASKNEVKLVLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPN 141
Query: 177 SELLLRIVTDDSSAQCRLSTKYGCELD-DVPVLLETVKELGLNLIGVSFHVGSGASDFST 235
S L++R ++ AQC L K+GC+ D D L+ K L L + G SFHVGSG S+
Sbjct: 142 SNLIVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQA 201
Query: 236 VTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFD---TITEVADVLNAALDYFFPQETH 292
+A+K + +F G + LD+GGG+ ++A+ +N ++ FP E
Sbjct: 202 YDRAIKKAKNLFKFGALLGYD-MDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDER- 259
Query: 293 SDVSFIAEPGRYXXXXXXXXXXXXIGKRNNSDSES-----MIYINDGVYGNMNCILFDHQ 347
V IAEPGR+ KR + M Y+NDGVYG+ NCIL+DHQ
Sbjct: 260 --VHIIAEPGRFFVAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQ 317
Query: 348 EPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMKYDLDIGD 407
HY+D N+ S + K IWGP+CD LD +S++ ++ +L+ GD
Sbjct: 318 VVIAE--------HYLD-NAESLP-----HLKSLIWGPSCDALDKISEDLHLP-NLNRGD 362
Query: 408 WVHFDNIGAYTCSAATPFNGFEQTVDIIF 436
+ F N+GAYT A+ FNGFE + F
Sbjct: 363 LLGFRNMGAYTMPIASAFNGFEVPKTLYF 391
>Hs16506287 [E] KOG0622 Ornithine decarboxylase
Length = 460
Score = 247 bits (630), Expect = 3e-65
Identities = 149/398 (37%), Positives = 217/398 (54%), Gaps = 38/398 (9%)
Query: 48 LKEKIDSINHETCDAGDENSFFVCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKR 107
LKE + T D + +FFV DLG I R + + LPRV PFYAVKCN + ++K
Sbjct: 23 LKELTLGASQATTD--EVAAFFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKV 80
Query: 108 LASMSTNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDEL 167
LA + F CA+K+E+E V G+ +II ANPCK + I++AAK+G++ +FDN EL
Sbjct: 81 LAQLGLGFSCANKAEMELVQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMEL 140
Query: 168 YKIKKYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVG 227
K+ K HP ++++L I TDDS + LS K+G L LLE K+ + ++GVSFH+G
Sbjct: 141 AKVVKSHPSAKMVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIG 200
Query: 228 SGASDFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFD-----TITEVADVLNAA 282
SG D Q++ D R VF+M G + +LD+GGG+ E+A V+N+A
Sbjct: 201 SGCPDPQAYAQSIADARLVFEMGTELG-HKMHVLDLGGGFPGTEGAKVRFEEIASVINSA 259
Query: 283 LDYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKR------------NNSDSESMIY 330
LD +FP+ D+ AE GRY I K+ N S S++++Y
Sbjct: 260 LDLYFPEGCGVDI--FAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVY 317
Query: 331 -INDGVYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDG 389
+++GVYG N +LFD+ P+P + K + Y S+WGP DG
Sbjct: 318 HLDEGVYGIFNSVLFDNICPTPIL--------------QKKPSTEQPLYSSSLWGPAVDG 363
Query: 390 LDCVSKEYYMKYDLDIGDWVHFDNIGAYTCSAATPFNG 427
DCV++ ++ L +GDW+ FDN+GAYT +PF G
Sbjct: 364 CDCVAEGLWLP-QLHVGDWLVFDNMGAYTVGMGSPFWG 400
>HsM7706220 [E] KOG0622 Ornithine decarboxylase
Length = 448
Score = 227 bits (579), Expect = 2e-59
Identities = 144/396 (36%), Positives = 210/396 (52%), Gaps = 37/396 (9%)
Query: 52 IDSINHETCDAGDENSFFVCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKRLASM 111
ID+ +E G +N+FFV DLG+I + + W ++ ++ PFY VKCN +++ LA++
Sbjct: 25 IDNYVYEHTLTG-KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAAL 83
Query: 112 STNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIK 171
T F C+SK+E+ V GV PE IIY +PCK S I++AAK GV T DN EL KI
Sbjct: 84 GTGFACSSKNEMALVQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIA 143
Query: 172 KYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVGSGAS 231
+ HP +++LL I T+D+ + K+G L + LLE KEL + +IGV FHV S
Sbjct: 144 RNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACK 203
Query: 232 DFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGY---QFDTITEVADVLNAALDYFFP 288
+ A+ D R VFDMA G + MLD+GGG+ +F + EV V++ LD +FP
Sbjct: 204 ESQVYVHALSDARCVFDMAGEIGF-TMNMLDIGGGFTGTEFQ-LEEVNHVISPLLDIYFP 261
Query: 289 QETHSDVSFIAEPGRYXXXXXXXXXXXXIGKR--------------NNSDSESMIYINDG 334
+ S V I+EPG Y I K+ + + M Y+NDG
Sbjct: 262 E--GSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDG 319
Query: 335 VYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVS 394
VYG+ L + P V HK K K D + S+WGP+CD LD +
Sbjct: 320 VYGSFASKLSEDLNTIPEV--HK------------KYKEDEPLFTSSLWGPSCDELDQIV 365
Query: 395 KEYYMKYDLDIGDWVHFDNIGAYTCSAATPFNGFEQ 430
+ + +L++GDW+ FDN+GA + + FN F++
Sbjct: 366 ESCLLP-ELNVGDWLIFDNMGADSFHEPSAFNDFQR 400
>Hs21361583 [E] KOG0622 Ornithine decarboxylase
Length = 448
Score = 227 bits (579), Expect = 2e-59
Identities = 144/396 (36%), Positives = 210/396 (52%), Gaps = 37/396 (9%)
Query: 52 IDSINHETCDAGDENSFFVCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKRLASM 111
ID+ +E G +N+FFV DLG+I + + W ++ ++ PFY VKCN +++ LA++
Sbjct: 25 IDNYVYEHTLTG-KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAAL 83
Query: 112 STNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIK 171
T F C+SK+E+ V GV PE IIY +PCK S I++AAK GV T DN EL KI
Sbjct: 84 GTGFACSSKNEMALVQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIA 143
Query: 172 KYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVGSGAS 231
+ HP +++LL I T+D+ + K+G L + LLE KEL + +IGV FHV S
Sbjct: 144 RNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACK 203
Query: 232 DFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGY---QFDTITEVADVLNAALDYFFP 288
+ A+ D R VFDMA G + MLD+GGG+ +F + EV V++ LD +FP
Sbjct: 204 ESQVYVHALSDARCVFDMAGEIGF-TMNMLDIGGGFTGTEFQ-LEEVNHVISPLLDIYFP 261
Query: 289 QETHSDVSFIAEPGRYXXXXXXXXXXXXIGKR--------------NNSDSESMIYINDG 334
+ S V I+EPG Y I K+ + + M Y+NDG
Sbjct: 262 E--GSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDG 319
Query: 335 VYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVS 394
VYG+ L + P V HK K K D + S+WGP+CD LD +
Sbjct: 320 VYGSFASKLSEDLNTIPEV--HK------------KYKEDEPLFTSSLWGPSCDELDQIV 365
Query: 395 KEYYMKYDLDIGDWVHFDNIGAYTCSAATPFNGFEQ 430
+ + +L++GDW+ FDN+GA + + FN F++
Sbjct: 366 ESCLLP-ELNVGDWLIFDNMGADSFHEPSAFNDFQR 400
>7304112 [E] KOG0622 Ornithine decarboxylase
Length = 339
Score = 170 bits (430), Expect = 4e-42
Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 81/368 (22%)
Query: 70 VCDLGEISRLRNYWTQILPRVTPFYAVKCNPNIEIIKRLASMSTNFDCASKSEIEKVLAC 129
+CDL + R W +++PR+ P YAVKCN + ++K LA + T FDCASK+E++ VL
Sbjct: 35 ICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKLVLGL 94
Query: 130 GVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPESELLLRIVTDDSS 189
GV PERII+A+PC+ +S +R+A + V T DN E+YK++K++P+S
Sbjct: 95 GVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDS------------ 142
Query: 190 AQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVGSGASDFSTVTQAVKDGRKVFDM 249
++ +A++ +F +
Sbjct: 143 -----------------------------------------NEVEAYDRAIEKAENIFKV 161
Query: 250 AESRGLPALKMLDVGGGY---QFDTITEVADVLNAALDYFFPQETHSDVSFIAEPGRYXX 306
E G +++LDVGGG+ + E+A +N +++ FP + + I+EPGR+
Sbjct: 162 GEMIG-HKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELRFPDKR---IRIISEPGRFFV 217
Query: 307 XXXXXXXXXXIGKRNNSDSES-----MIYINDGVYGNMNCILFDHQEPSPRVLYHKNRFH 361
KR + M Y+NDG++G + + +E +P +
Sbjct: 218 EAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPEL-------- 269
Query: 362 YMDINSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMKYDLDIGDWVHFDNIGAYTCSA 421
Y+D S K IWGP+CD +D +S + +L+ GD + F N+GAYT
Sbjct: 270 YLDEAESLP------KLKSVIWGPSCDAMDKISD--LLLPNLNPGDLLGFRNMGAYTMPI 321
Query: 422 ATPFNGFE 429
A+PFNGF+
Sbjct: 322 ASPFNGFD 329
>CE10982 [E] KOG0622 Ornithine decarboxylase
Length = 477
Score = 115 bits (289), Expect = 1e-25
Identities = 97/400 (24%), Positives = 175/400 (43%), Gaps = 44/400 (11%)
Query: 38 QQSHHKIFAALKEKIDSINHETCDAGDENSFFVCDLGEISRLRNYWTQILPRVTPFYAVK 97
+QS + A + I+ H G FFV D+ I R +LPRV P YAV
Sbjct: 27 EQSIAVLSGAYRNPIEMARHVAARCGSYQPFFVMDVAAIERRLEALRVMLPRVRPNYAVA 86
Query: 98 CNPNIEIIKRLA-SMSTNFDCASKSEIEKVLACGVDPERIIYANPCKASSFIRFAAKNGV 156
CN + + + L+ ++ NF+ ++ +E+E +++ V+P R ++ + I+ A G
Sbjct: 87 CNADPVLARVLSNNIDVNFEVSNTAELE-LVSMNVEPSRAVFCSQLMTRKAIKNAVLAGC 145
Query: 157 KKSTFDNIDELYKIKKYHPESELLLRIVTDDSSAQCRLSTKYGCELDDVPVLLETVKELG 216
++ ++ + PE+E++L + S+ + +GC +D++ +L+ LG
Sbjct: 146 STFVVESEKQVTDVMNASPEAEIILAVCLPYSTGE----VPFGCSVDEIEEILDMAHLLG 201
Query: 217 LNLIGVSFHVGSGASDFSTVTQAVKDGRKVFDMAESRGLPA-------LKMLDVGGGYQF 269
N+ G+ +G A+ +T +V D R +F+ A+ + L L + G
Sbjct: 202 ANVTGIYLELGLRATLEDYIT-SVHDARSIFETADQKFLTLRRVCFGNLSVPTGADGAVN 260
Query: 270 DTITEVADVLNAALDYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKR--------- 320
+ + LN +D F S++ F A GR+ IGKR
Sbjct: 261 NEFMSFCNSLNNVIDDLF----ESNIDFSASIGRFLVTNAFTLCTNVIGKRAMDAKFITN 316
Query: 321 -NNSDSESMIY-INDGVYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNY 378
+ D +Y NDGVYG+ C D K +D+ + S+ + +
Sbjct: 317 DDFDDGVGFVYQTNDGVYGSFGCKQMD----------IKPLCKPLDVENDSEEQL----H 362
Query: 379 KVSIWGPTCDGLDCVSKEYYMKYDLDIGDWVHFDNIGAYT 418
+I GPT DG D V++ L +G+W+ ++ +GA+T
Sbjct: 363 FGTILGPTLDGTD-VAQRLMKSRQLRVGEWLVWEQMGAFT 401
>At3g14390 [E] KOG0622 Ornithine decarboxylase
Length = 484
Score = 64.7 bits (156), Expect = 3e-10
Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 49/386 (12%)
Query: 64 DENSFFVCDLGEISRLRNYWTQILPRVTPF--YAVKCNPNIEIIKRLASMSTNFDCASKS 121
+ F++ +I+R + + L V+ YA+K N N++I++ L S+ S +
Sbjct: 90 ERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGN 149
Query: 122 EIEKVLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPESEL-- 179
E+ L G DP + I+ K+ + AA+ GV F N+D + + S +
Sbjct: 150 ELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGV----FVNVDSEFDLNNIVEASRISG 205
Query: 180 -----LLRIVTDDSS------AQCRLSTKYGCELDDVPVLLETVK--ELGLNLIGVSFHV 226
LLRI D A ++K+G + + L+ VK L L+G H+
Sbjct: 206 KQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHL 265
Query: 227 GSGASDFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFD------TITEVADVLN 280
GS + A + D +G + L++GGG D + D++N
Sbjct: 266 GSTITKVDIFRDAAVLMIEYIDEIRRQGF-EVSYLNIGGGLGIDYYHAGAVLPTPMDLIN 324
Query: 281 AALDYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKRNNSDSESMIYINDGVYGNMN 340
+ + D++ I EPGR G + N +++ I I+ + +
Sbjct: 325 TVRELVLSR----DLNLIIEPGRSLIANTCCFVNHVTGVKTNG-TKNFIVIDGSMAELIR 379
Query: 341 CILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMK 400
L+D Y I S +A K + GP C+ D + K+ +
Sbjct: 380 PSLYD---------------AYQHIELVSPPPAEAEVTKFDVVGPVCESADFLGKDRELP 424
Query: 401 YDLDIGDWVHFDNIGAYTCSAATPFN 426
G + + GAY S A+ +N
Sbjct: 425 TPPQ-GAGLVVHDAGAYCMSMASTYN 449
>At5g11880 [E] KOG0622 Ornithine decarboxylase
Length = 496
Score = 52.8 bits (125), Expect = 1e-06
Identities = 86/393 (21%), Positives = 149/393 (37%), Gaps = 56/393 (14%)
Query: 64 DENSFFVCDLGEISRLRNYWTQILPRVTPF--YAVKCNPNIEIIKRLASMSTNFDCASKS 121
++ F++ +I+R + + L V YA+K N N++I++ L S+ S +
Sbjct: 95 EKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGN 154
Query: 122 EIEKVLAC------GVDP-ERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYH 174
E+ L GVD R I+ K+ + AA+ GV F N+D + +
Sbjct: 155 ELRLALLAVFDHVFGVDEMNRCIFNGNGKSLEDLVLAAQEGV----FVNVDSEFDLNNIV 210
Query: 175 PESEL-------LLRIVTDDSS------AQCRLSTKYGCELDDVPVLLETVK--ELGLNL 219
S + LLRI D A ++K+G + + L+ VK L L
Sbjct: 211 EASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKL 270
Query: 220 IGVSFHVGSGASDFSTVTQAVKDGRKVFDMAESRGLPALKMLDVGGGYQFD------TIT 273
+G H+GS + A + D +G + L++GGG D +
Sbjct: 271 VGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGF-EVSYLNIGGGLGIDYYHAGAVLP 329
Query: 274 EVADVLNAALDYFFPQETHSDVSFIAEPGRYXXXXXXXXXXXXIGKRNNSDSESMIYIND 333
D++N + + D++ I EPGR G + N +++ I I+
Sbjct: 330 TPMDLINTVRELVLSR----DLNLIIEPGRSLIANTCCFVNHVTGVKTNG-TKNFIVIDG 384
Query: 334 GVYGNMNCILFDHQEPSPRVLYHKNRFHYMDINSSSKAKCDACNYKVSIWGPTCDGLDCV 393
+ + L+D Y I S +A K + GP C+ D +
Sbjct: 385 SMAELIRPSLYD---------------AYQHIELVSPTPPEAEVTKFDVVGPVCESADFL 429
Query: 394 SKEYYMKYDLDIGDWVHFDNIGAYTCSAATPFN 426
K+ + G + + GAY S A+ +N
Sbjct: 430 GKDRELPTPPQ-GAGLVVHDAGAYCMSMASTYN 461
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,658,202
Number of Sequences: 60738
Number of extensions: 1126124
Number of successful extensions: 2643
Number of sequences better than 1.0e-05: 12
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2593
Number of HSP's gapped (non-prelim): 13
length of query: 441
length of database: 30,389,216
effective HSP length: 109
effective length of query: 332
effective length of database: 23,768,774
effective search space: 7891232968
effective search space used: 7891232968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)