ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII0696   suspect: LH   S     KOG3131  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII0696  247590 246733 -286 
         (286 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YLR412w [S] KOG3131 Uncharacterized conserved protein                 174   1e-43

>YLR412w [S] KOG3131 Uncharacterized conserved protein
          Length = 274

 Score =  174 bits (441), Expect = 1e-43
 Identities = 92/254 (36%), Positives = 140/254 (54%), Gaps = 14/254 (5%)

Query: 24  RSFDEQIDEARNAIRGSELLQSLHQSLTPF--QVTHVRCLALGNFHQDFPARFQXXXXXX 81
           ++F+E +   R+ ++ S  L  L ++L P    +  +RC+A+GNF +DFPA +Q      
Sbjct: 21  KAFEEIVQTNRDVLKKSAFLSDLLENLQPHLNNIKKIRCVAIGNFKEDFPATYQFALLLE 80

Query: 82  XXXXXKVSR-----CSFYDPVFDDEDLAYINGNGS-WSVDESSPFLD-VNPSQIMFFLPH 134
                K         S YDP+F  E++ Y+   GS W ++E     D ++   +++FLPH
Sbjct: 81  ITDYIKSEDERDVVVSLYDPIFTKEEIQYLKSLGSKWLIEEEFSENDAIDYESVLYFLPH 140

Query: 135 APLDLTEKVIAEESPKVWLANHLLQHTDRLTKVQLYDKYPLLCKLVNYINSNTATKIRSA 194
           APLDLTE +++ + P +WLAN+++ HTDR TK +L + YP L KLV+Y+ +N   +++ A
Sbjct: 141 APLDLTENILSSQRPHLWLANNMISHTDRYTKAKLCENYPNLSKLVHYLQTNAPPEVKKA 200

Query: 195 TDTDEDGFQTFTXXXXXXXXXXXXXXETV---IEYDVIESYFNDCKIINDFENGSLLANK 251
            D   DGF TF               +     I+YD I   F  C+I+ DF+ G  L  K
Sbjct: 201 HDV--DGFATFIPKRKRKNRNNSSKLKVTPSDIDYDSIAPKFKSCQILTDFDEGKYLKEK 258

Query: 252 IWLNSFSDLALHVI 265
            W+NSFSDL LH I
Sbjct: 259 PWINSFSDLTLHAI 272


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,585,190
Number of Sequences: 60738
Number of extensions: 591561
Number of successful extensions: 1150
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1146
Number of HSP's gapped (non-prelim): 1
length of query: 286
length of database: 30,389,216
effective HSP length: 105
effective length of query: 181
effective length of database: 24,011,726
effective search space: 4346122406
effective search space used: 4346122406
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)