ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0716 check: MH R KOG0017 General function prediction only FOG: Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0716 253904 250485 -1140
(1140 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR410w [R] KOG0017 FOG: Transposon-encoded proteins with TYA re... 1580 0.0
SPCC1672.06c [Z] KOG1057 Arp2/3 complex-interacting protein VIP1... 938 0.0
Hs7662084_1 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/... 369 e-101
Hs7662118 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/As... 359 1e-98
7295640 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1... 357 6e-98
CE26919 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1... 350 9e-96
At3g01310 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/As... 343 1e-93
At5g15070 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/As... 331 5e-90
Hs18547235 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/A... 141 7e-33
>YLR410w [R] KOG0017 FOG: Transposon-encoded proteins with TYA reverse
transcriptase integrase domains in various combinations
Length = 1146
Score = 1580 bits (4091), Expect = 0.0
Identities = 796/1119 (71%), Positives = 907/1119 (80%), Gaps = 22/1119 (1%)
Query: 20 MPPLFLDSNTKKAMESIAPILEGFTPKTSSSENKSLKLPPAGFTSDDDDETNKLVRTLSI 79
M PLFL+ NT+KAM+SIAPILEGF+PKTS+SEN SLKLPP G D +E + TL
Sbjct: 30 MSPLFLNKNTQKAMQSIAPILEGFSPKTSASENMSLKLPPPGIQDDHSEENLTVHDTLQR 89
Query: 80 SSTGSTGRHMTPSVLGTSFDSMNGNKLQRLKSNQSGSA-----SVSAILEGSPSPSPMLE 134
+ + + G G + +++ + L++ S A S S I+ + + + + +
Sbjct: 90 TISTALGN-------GNNTNTVTTSGLKKADSESKSEADPEGLSNSNIVNDADNINSISK 142
Query: 135 EPHAFPFIPQALVSNEAVTTNTDGSTXXXXXXXXXXXXXXXXKPQLPKIGKIGVCAMDAK 194
P +PQ + +A TN ++ KP+LPK+GKIGVCAMDAK
Sbjct: 143 T--GSPHLPQGTM--DAEQTNMGTNSVPTSSASSRKSSTSHPKPRLPKVGKIGVCAMDAK 198
Query: 195 VLSKPCRHILNRLIEHGEFETIIFGDKVILDESIENWPTCDFLISFFSNGFPLEKAIKYV 254
VLSKP RHILNRLIEHGEFET+IFGDKVILDE IENWPTCDFLISFFS+GFPL+KAIKYV
Sbjct: 199 VLSKPMRHILNRLIEHGEFETVIFGDKVILDERIENWPTCDFLISFFSSGFPLDKAIKYV 258
Query: 255 KLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRDGGPKIDDELKSMLAERG 314
KLRKP+IINDLIMQK+LWDRRLCL++L A NVPTPPRLEI+RDGGP+ ++EL++ L E G
Sbjct: 259 KLRKPFIINDLIMQKILWDRRLCLQVLEAYNVPTPPRLEISRDGGPRANEELRAKLREHG 318
Query: 315 VIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSKNGGGGRRLFRK 374
V V V+EP W+MVDDDTLEV+GK MTKPFVEKPVDGEDHNIYIYYHSKNGGGGRRLFRK
Sbjct: 319 VEVKPVEEPEWKMVDDDTLEVDGKTMTKPFVEKPVDGEDHNIYIYYHSKNGGGGRRLFRK 378
Query: 375 VGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDVKAYTVGETFCHAETRKSPVVDGIVR 434
VGNKSSEFDPTL+ PRTEGSYIYE+FMDTDNFEDVKAYT+GE FCHAETRKSPVVDGIVR
Sbjct: 379 VGNKSSEFDPTLVHPRTEGSYIYEQFMDTDNFEDVKAYTIGENFCHAETRKSPVVDGIVR 438
Query: 435 RNTHGKEIRYITELSPEEKEMARQVSKTFAQMICGFDLLRVEGKSYVIDVNGFSFVKDNT 494
RNTHGKE+RYITELS EEK +A +VSK F+QMICGFDLLRV GKSYVIDVNGFSFVKDN
Sbjct: 439 RNTHGKEVRYITELSDEEKTIAGKVSKAFSQMICGFDLLRVSGKSYVIDVNGFSFVKDNK 498
Query: 495 EYYDACAKILRDTFYNAKKLMDLEKRNLPAIQEEKTQKWVFKGLVTVIRHADRTPKQKLK 554
YYD+CA ILR TF AKK MD+EK+NLP I+EEK QKWVFKGL +IRHADRTPKQK K
Sbjct: 499 AYYDSCANILRSTFIEAKKKMDMEKKNLPIIREEKEQKWVFKGLAIIIRHADRTPKQKFK 558
Query: 555 HSFTSPIFLSLLKGHKEEVVIRNINDLQIVLQALKIAQEENAEDPAKLAVLANALEKKIS 614
HSFTSPIF+SLLKGHKEEVVIRN+NDL+IVLQAL+IA +E A +PAK+ VLANALEKK++
Sbjct: 559 HSFTSPIFISLLKGHKEEVVIRNVNDLKIVLQALRIALDEKAGNPAKIKVLANALEKKLN 618
Query: 615 FPGTKIQLKPVLNKDNEVEKVQFILKWGGEPTHSAHFQAEELGEQMRQDFDLLNKNILHN 674
FPGTKIQLKPVLNK+NEVEKVQFILKWGGEPTHSA +QA ELGEQMRQDFDLLNK+IL N
Sbjct: 619 FPGTKIQLKPVLNKENEVEKVQFILKWGGEPTHSAKYQATELGEQMRQDFDLLNKSILQN 678
Query: 675 IKIFSSSERRVLVSAQIWATALFGADEISSDEISIRKDLLDDSNAAXXXXXXXXXXXXXX 734
IKIFSSSERRVL +AQ W ALFGADE+ SDEISIRKDLLDDSNAA
Sbjct: 679 IKIFSSSERRVLHTAQYWTRALFGADELGSDEISIRKDLLDDSNAAKDLMDKVKKKLKPL 738
Query: 735 XRMGKEAPPQFAWPAKMPEPYLVIKRVVDLMNYHKKIMDHNFATKNVEEMQTCWCCAEDS 794
R GKEAPPQFAWP+KMPEPYLVIKRVV+LMNYHKKIMD+NFA K+V MQT WC +ED
Sbjct: 739 LREGKEAPPQFAWPSKMPEPYLVIKRVVELMNYHKKIMDNNFAKKDVNSMQTRWCTSEDP 798
Query: 795 MLFKERWDKLFKEFVTVDKVDPSKISELYDTMKYDALHNRQFLEHIFMPDDDTEVENEEV 854
LFKERWDKLFKEF +KVDPSKISELYDTMKYDALHNRQFLE+IF P E +E+
Sbjct: 799 SLFKERWDKLFKEFNNAEKVDPSKISELYDTMKYDALHNRQFLENIFDPGLPNEAIADEL 858
Query: 855 CHHSLVDRYPINILARNNFKIPDSSNAQMTXXXXXXXXXXXXXXXLGWVLESVESGSKSP 914
HSLVDRYPIN+LA+NNFKI DS + LGWVLES ++ +
Sbjct: 859 GSHSLVDRYPINVLAKNNFKIIDSHSMN-----NSGKNSSNSVGSLGWVLESGKTSTARN 913
Query: 915 RSSNSTFDDPKFIQLRELFKLSKVLFDFICPQEYGIEDNEKLDIGLLTSLPLAKQIFNDI 974
S+S FD+P+F+QLREL+KL+KVLFDFICP+EYGI D EKLDIGLLTSLPLAKQI NDI
Sbjct: 914 PKSSSQFDEPRFMQLRELYKLAKVLFDFICPKEYGISDAEKLDIGLLTSLPLAKQILNDI 973
Query: 975 DEMKKKDTPACVAYFTKESHIYTLLNIIYESGLPMRIARNALPEFDYLSQINFELYESTD 1034
+MK ++TPACVAYFTKESHIYTLLNIIYESG+PMRIARNALPE DYLSQI FELYESTD
Sbjct: 974 GDMKNRETPACVAYFTKESHIYTLLNIIYESGIPMRIARNALPELDYLSQITFELYESTD 1033
Query: 1035 ASGNKSHAVRLKMSPGCHTQDPLDVQLDDRHYISCIPKISLTRHLDVDHVSQKFRNKFNR 1094
ASG KSH++RLKMSPGCHTQDPLDVQLDDRHYISCIPKISLT+HLD+D+V QK RNKF R
Sbjct: 1034 ASGQKSHSIRLKMSPGCHTQDPLDVQLDDRHYISCIPKISLTKHLDMDYVQQKLRNKFTR 1093
Query: 1095 VILPQKFTPVNITSPNLSF-KRKSITETLNLPTAKEQAA 1132
VI+P KFTPVNITSPNLSF KRK+ +++++ K A+
Sbjct: 1094 VIMPPKFTPVNITSPNLSFQKRKTRRKSVSVEKLKRPAS 1132
>SPCC1672.06c [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved in
regulation of actin cytoskeleton
Length = 920
Score = 938 bits (2425), Expect = 0.0
Identities = 486/931 (52%), Positives = 631/931 (67%), Gaps = 56/931 (6%)
Query: 186 IGVCAMDAKVLSKPCRHILNRLIEHGEFETIIFGDKVILDESIENWPTCDFLISFFSNGF 245
+G+CAMDAK SKPCR+ILNR+I GEFE I+FGD +ILDE++ENWP CD+LI F+S+GF
Sbjct: 35 VGICAMDAKARSKPCRNILNRIIAEGEFEAIVFGDNMILDEAVENWPACDYLICFYSSGF 94
Query: 246 PLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRDGGPKIDDE 305
PL+KA KYV+LRKP+ +ND++ Q++LWDRRL L +L A V TP RL +RDGGPKI+
Sbjct: 95 PLKKAEKYVELRKPFCVNDVVFQELLWDRRLVLNILDAIRVSTPQRLICSRDGGPKINKV 154
Query: 306 LKSMLAER-GVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSKN 364
L+ L + G+ ++ V P +M+D+DTL V+GK++ KP+VEKPV GEDHNIYIY+
Sbjct: 155 LEEKLRRKFGIEITEVPTPEVKMLDEDTLSVDGKIIKKPYVEKPVYGEDHNIYIYFPKSV 214
Query: 365 GGGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDVKAYTVGETFCHAETR 424
GGGGR+LFRKV NKSS++DP L PRTEGS+IYE+FM+ DN EDVK YTVG + HAETR
Sbjct: 215 GGGGRKLFRKVANKSSDYDPDLCAPRTEGSFIYEEFMNVDNAEDVKVYTVGPHYSHAETR 274
Query: 425 KSPVVDGIVRRNTHGKEIRYITELSPEEKEMARQVSKTFAQMICGFDLLRVEGKSYVIDV 484
KSPVVDGIVRRN HGKEIR+IT LS EEK MA ++S F Q +CGFDLLRV G+SYVIDV
Sbjct: 275 KSPVVDGIVRRNPHGKEIRFITNLSEEEKNMASKISIAFEQPVCGFDLLRVSGQSYVIDV 334
Query: 485 NGFSFVKDNTEYYDACAKILRDTFYNAKKLMDLEKRN-LPAIQE------EKTQKWVFKG 537
NG+SFVKDN +YYD A+IL+ F+ A++ +RN +P++QE +++ W K
Sbjct: 335 NGWSFVKDNNDYYDNAARILKQMFHVAER----HRRNRVPSVQEVLNPPPRESEAWRLKS 390
Query: 538 LVTVIRHADRTPKQKLKHSFTSPIFLSLLKGHKEEVVIRNINDLQIVLQALKIAQEENAE 597
LV V+RHADRTPKQK K SFTS F+ LL+GH EEV++RN L VL A +A E E
Sbjct: 391 LVGVLRHADRTPKQKFKFSFTSDPFVKLLQGHTEEVILRN-EQLNSVLAATNLATELKCE 449
Query: 598 DPAKLAVLANALEKKISFPGTKIQLKPVLNKDNEVEKVQFILKWGGEPTHSAHFQAEELG 657
D KL L ALE K PGTK+QLKP + + ++ K+Q I+KWGGE THSA +Q+++LG
Sbjct: 450 DINKLKQLRLALETKKDLPGTKVQLKPAYSPEGKLLKLQLIIKWGGEFTHSARYQSKDLG 509
Query: 658 EQMRQDFDLLNKNILHNIKIFSSSERRVLVSAQIWATALFGADEISSDEISIRKDLLDDS 717
EQ +D ++N++ L +++I++SSERRV SA+I+A A + I SD + +RKDLLDDS
Sbjct: 510 EQFHKDLYIMNRDCLKDVEIYTSSERRVSASAEIFAMAFLEQETIPSDLLKVRKDLLDDS 569
Query: 718 NAAXXXXXXXXXXXXXXXRMGKEAPPQFAWPAKMPEPYLVIKRVVDLMNYHKKIMDHNFA 777
NAA R+G A +F WP MP+P V+++VV LM YH+ +M NF
Sbjct: 570 NAAKDTMDKVKKHLKSLLRVGDTARKEFTWPENMPKPCEVMQQVVQLMKYHRAVMRENFI 629
Query: 778 T--KNVEEMQTCWCCAEDSMLFKERWDKLFKEFVTVDKVDPSKISELYDTMKYDALHNRQ 835
VE++Q+ WCC E+ LF+ERW+KLF EF +K DPSK+SELYDT+KYDALHNRQ
Sbjct: 630 ILGPEVEQVQSRWCCNENPALFRERWEKLFSEFCDSEKADPSKVSELYDTLKYDALHNRQ 689
Query: 836 FLEHIFMPDDDTEVENEEVCHHSLVDRYPINILARNNFKIPDSSNAQMTXXXXXXXXXXX 895
FLE IF P ++ SL+ + P SN +
Sbjct: 690 FLERIFTPYQYLKLPQSP----SLIAKEPPQ---------RTDSNGNLVGMT-------- 728
Query: 896 XXXXLGWVLESVESGSKSPRSSNSTFDDPKFIQLRELFKLSKVLFDFICPQEYGIEDNEK 955
+N+ + +L EL+ L+KVLFDF+ PQEYGIE EK
Sbjct: 729 --------------------GANTNHTERPLEKLYELYDLAKVLFDFVSPQEYGIEPKEK 768
Query: 956 LDIGLLTSLPLAKQIFNDIDEMKKKDTPACVAYFTKESHIYTLLNIIYESGLPMRIARNA 1015
L+IGLLTS+PL +QI +DI E + D + YFTKESHIYTLLN I ESGLPM++ RN
Sbjct: 769 LEIGLLTSVPLLRQIIHDIKEARDSDHASTRMYFTKESHIYTLLNCILESGLPMKLPRNQ 828
Query: 1016 LPEFDYLSQINFELYESTDASGNKSHAVRLKMSPGCHTQDPLDVQLDDRHYISCIPKISL 1075
+PE DYL+QI FEL+E T+ SGNK +VR+ +SPGC+ Q PLD+ LD +H IS P+ SL
Sbjct: 829 IPELDYLTQICFELFERTNPSGNKEFSVRITLSPGCYAQCPLDMNLDAKHCISVSPRRSL 888
Query: 1076 TRHLDVDHVSQKFRNKFNRVILPQKFTPVNI 1106
TRHLD+ K + N V LP++F PVNI
Sbjct: 889 TRHLDLQQFITKTEDLCNSVHLPKRFIPVNI 919
>Hs7662084_1 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 1099
Score = 369 bits (947), Expect = e-101
Identities = 261/722 (36%), Positives = 356/722 (49%), Gaps = 103/722 (14%)
Query: 186 IGVCAMDAKVLSKPCRHILNRLIEHGEFETIIFGDKVILDESIENWPTCDFLISFFSNGF 245
+G+CAM K SKP IL RL +I G+ VIL+E +ENWP+C LISF S GF
Sbjct: 57 VGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPSCHCLISFHSKGF 116
Query: 246 PLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRDGGPKIDDE 305
PL+KA+ Y KLR P++INDL MQ + DRR R+L + P + RD P +E
Sbjct: 117 PLDKAVAYSKLRNPFLINDLAMQYYIQDRREVYRILQEEGIDLPRYAVLNRD--PARPEE 174
Query: 306 LKSMLAERGVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSKNG 365
+ E D +EV G V KPFVEKPV EDHN+YIYY S G
Sbjct: 175 CNLIEGE------------------DQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAG 216
Query: 366 GGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDVKAYTVGETFCHAETRK 425
GG +RLFRK+G++SS + P +T GSYIYE+FM TD DVK YTVG + HAE RK
Sbjct: 217 GGSQRLFRKIGSRSSVYSPESSVRKT-GSYIYEEFMPTDG-TDVKVYTVGPDYAHAEARK 274
Query: 426 SPVVDGIVRRNTHGKEIRYITELSPEEKEMARQVSKTFAQMICGFDLLRVEGKSYVIDVN 485
SP +DG V R++ GKEIRY L+ EK +AR+V F Q +CGFDLLR G S+V DVN
Sbjct: 275 SPALDGKVERDSEGKEIRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVN 334
Query: 486 GFSFVKDNTEYYDACAKILRDTF-------YNAKKLMDLEKRNLPAIQEEKTQKWVFKGL 538
GFSFVK++ +YYD CAKIL +T + + E ++P + + +
Sbjct: 335 GFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCV 394
Query: 539 VTVIRHADRTPKQKLKHSFTSPIFLSLLKGH----KEEVVIRNINDLQIVLQALKIAQEE 594
+ +IRH DRTPKQK+K P F +L + H ++ ++ LQ VL ++ E
Sbjct: 395 IAIIRHGDRTPKQKMKMEVKHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAE 454
Query: 595 NAEDP--------AKLAVLANALEKKISFPG--TKIQLKPV---LNKDNEVEKVQ----- 636
++P KL L + LE F G K+QL + NE + Q
Sbjct: 455 LEKEPGGEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASNEGQDPQRETLA 514
Query: 637 ----FILKWGGEPTHSAHFQAEELGEQMRQDFD---------------LLNKNILHNIKI 677
+LKWGGE T + QAEELG R + L+ H++KI
Sbjct: 515 PSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKI 574
Query: 678 FSSSERRVLVSAQIWATALFGAD-EISSDEISIRKDL----LDDSNAAXXXXXXXXXXXX 732
++S E RV ++A +A L + E++ + + K L DS+
Sbjct: 575 YASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDGDSLSSCQHRVKAR 634
Query: 733 XXXRMGKEAPPQFAWPAKMPEPY--LVIKRVVDLMNYHK------KIMDHNFA-----TK 779
+ ++AP F PE Y L R L+N K+ D FA T
Sbjct: 635 LHHILQQDAP--FG-----PEDYDQLAPTRSTSLLNSMTIIQNPVKVCDQVFALIENLTH 687
Query: 780 NVEE-------MQTCWCCAEDSMLFKERWDKLFKEF-VTVDKVDPSKISELYDTMKYDAL 831
+ E + +E L +RW KL ++F + D SKI ++YD +KYD
Sbjct: 688 QIRERMQDPRSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQ 747
Query: 832 HN 833
HN
Sbjct: 748 HN 749
Score = 63.9 bits (154), Expect = 1e-09
Identities = 50/150 (33%), Positives = 69/150 (45%), Gaps = 30/150 (20%)
Query: 931 ELFKLSKVLFDFICPQEYGIEDNEKLDIGLLTSLPLAKQIFNDI-----DEMKKKDTP-- 983
EL +LSK L D + PQEYGI EKL+I + LPL ++I D+ DE K P
Sbjct: 759 ELLRLSKALADVVIPQEYGISREEKLEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLY 818
Query: 984 -----------ACVAYFTKESHIYTLLNIIYESGLPMRIA----------RNALPEFDYL 1022
YFT ESH+++LL++ GL +A+ E +Y+
Sbjct: 819 SRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETQDAQWQRALDYLSAISELNYM 878
Query: 1023 SQINFELYE--STDASGNKSHAVRLKMSPG 1050
+QI LYE + D + V L SPG
Sbjct: 879 TQIVIMLYEDNTQDPLSEERFHVELHFSPG 908
>Hs7662118 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 1243
Score = 359 bits (922), Expect = 1e-98
Identities = 250/716 (34%), Positives = 357/716 (48%), Gaps = 92/716 (12%)
Query: 186 IGVCAMDAKVLSKPCRHILNRLIEHGEFETIIFGDKVILDESIENWPTCDFLISFFSNGF 245
+G+C+M K SKP + IL R+ ++F ++VIL+E +ENWP CD LISF S GF
Sbjct: 46 VGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGF 105
Query: 246 PLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRDGGPKIDDE 305
PL+KA+ Y KLR P++INDL MQ ++ DRR +L A + P + RD P E
Sbjct: 106 PLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRD--PNNPKE 163
Query: 306 LKSMLAERGVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSKNG 365
+ E D +EV G+V KPFVEKPV EDHN+YIYY + G
Sbjct: 164 CNLIEGE------------------DHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAG 205
Query: 366 GGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDVKAYTVGETFCHAETRK 425
GG +RLFRK+G++SS + P R GSYIYE+FM TD DVK YTVG + HAE RK
Sbjct: 206 GGSQRLFRKIGSRSSVYSPES-NVRKTGSYIYEEFMPTDG-TDVKVYTVGPDYAHAEARK 263
Query: 426 SPVVDGIVRRNTHGKEIRYITELSPEEKEMARQVSKTFAQMICGFDLLRVEGKSYVIDVN 485
SP +DG V R++ GKE+RY L+ EK +A +V F Q +CGFDLLR G+SYV DVN
Sbjct: 264 SPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVN 323
Query: 486 GFSFVKDNTEYYDACAKILRDTF-------YNAKKLMDLEKRNLPAIQEEKTQKWVFKGL 538
GFSFVK++ +YYD CAKIL + ++ + LE ++P + + +
Sbjct: 324 GFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCV 383
Query: 539 VTVIRHADRTPKQKLKHSFTSPIFLSLLK---GHKE-EVVIRNINDLQIVLQ-----ALK 589
+ VIRH DRTPKQK+K F L + G+K ++ ++ LQ VL ++
Sbjct: 384 IAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLME 443
Query: 590 IAQEENA---EDPAKLAVLANALEKKISFPG--TKIQLK------PVLNKDNEVEK---- 634
+ Q ++ E+ KL L LE F G K+QL P + + E +
Sbjct: 444 LGQNNDSEIEENKPKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDSRREEP 503
Query: 635 -VQFILKWGGEPTHSAHFQAEELGEQMRQDFD---------------LLNKNILHNIKIF 678
+ +LKWGGE T + QAEELG R + L+ H++KI+
Sbjct: 504 SLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIY 563
Query: 679 SSSERRVLVSAQIWATALFGAD-EISSDEISIRKD-----LLD-DSNAAXXXXXXXXXXX 731
+S E RV ++A +A L + E++ + + K LLD DS++
Sbjct: 564 ASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARL 623
Query: 732 XXXXRMGKEAPPQ-------------FAWPAKMPEPYLVIKRVVDLMNYHKKIMDHNFAT 778
+ ++ + + P +V L+ + H
Sbjct: 624 HEILQKDRDFTAEDYEKLTPSGSISLIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMED 683
Query: 779 KNVEEMQTCWCCAEDSMLFKERWDKLFKEFVTVD-KVDPSKISELYDTMKYDALHN 833
++Q +E L RW KL K+F T + + D SKI ++YD +KYD HN
Sbjct: 684 PKSSDIQLYH--SETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHN 737
Score = 65.1 bits (157), Expect = 6e-10
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 30/150 (20%)
Query: 931 ELFKLSKVLFDFICPQEYGIEDNEKLDIGLLTSLPLAKQIFNDIDEMKKKDTPACV---- 986
EL++LSK L D + PQEYGI EKL+I PL ++I +D+ + DT +
Sbjct: 747 ELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVY 806
Query: 987 --------------AYFTKESHIYTLLNIIYESGLPMRIA----------RNALPEFDYL 1022
YFT ESH+++LL+I+ L N + E +Y+
Sbjct: 807 SRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCNESKDEQWKRAMDYLNVVNELNYM 866
Query: 1023 SQINFELYE--STDASGNKSHAVRLKMSPG 1050
+QI LYE + D S + V L SPG
Sbjct: 867 TQIVIMLYEDPNKDLSSEERFHVELHFSPG 896
>7295640 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 1751
Score = 357 bits (916), Expect = 6e-98
Identities = 262/744 (35%), Positives = 365/744 (48%), Gaps = 113/744 (15%)
Query: 186 IGVCAMDAKVLSKPCRHILNRLIEHGEFETIIFGDKVILDESIENWPTCDFLISFFSNGF 245
+G+CAM K SKP + IL RL E + + F + VIL E ++NWPTCD L+SF S GF
Sbjct: 69 VGICAMAKKTQSKPMKEILTRLGEFEFIKLVTFEENVILREPVQNWPTCDCLVSFHSKGF 128
Query: 246 PLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRDG-GPKIDD 304
PLEKAI+Y +LR P+++N+L MQ + DRR +L + P + RD PK +
Sbjct: 129 PLEKAIEYAQLRNPFVLNNLHMQYDIQDRRRVYAILEKEGIEIPRYAVLDRDSPDPKHHE 188
Query: 305 ELKSMLAERGVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSKN 364
++S +D +EV G KPFVEKPV EDHNIYIYY +
Sbjct: 189 LIES---------------------EDHVEVNGITFNKPFVEKPVSAEDHNIYIYYPTSA 227
Query: 365 GGGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDVKAYTVGETFCHAETR 424
GGG +RLFRK+G++SS + P + R GS+IYE FM TD DVK YTVG + HAE R
Sbjct: 228 GGGSQRLFRKIGSRSSVYSPES-RVRKTGSFIYEDFMPTDG-TDVKVYTVGPDYAHAEAR 285
Query: 425 KSPVVDGIVRRNTHGKEIRYITELSPEEKEMARQVSKTFAQMICGFDLLRVEGKSYVIDV 484
KSP +DG V R++ GKEIRY L+ EK ++R+V F Q +CGFDLLR GKSYV DV
Sbjct: 286 KSPALDGKVERDSEGKEIRYPVILNHSEKLISRKVCLAFKQTVCGFDLLRANGKSYVCDV 345
Query: 485 NGFSFVKDNTEYYDACAKILRDTF-------YNAKKLMDLEKRNLPAIQEEKTQKWVFKG 537
NGFSFVK++ +YYD CAKIL + + + + + P + + +
Sbjct: 346 NGFSFVKNSNKYYDDCAKILGNMILRELTPTLHIPWSVPFQLDDPPIVPTTFGKMMELRC 405
Query: 538 LVTVIRHADRTPKQKLKHSFTSPIFLSLLK---GHK-EEVVIRNINDLQIVLQALKI--- 590
+V VIRH DRTPKQK+K P F + + G+K V ++ LQ +L +
Sbjct: 406 VVAVIRHGDRTPKQKMKVEVRHPKFFEIFEKYDGYKLGHVKLKRPKQLQEILDIARFLLS 465
Query: 591 -----AQEENAEDPAKLAVLANALEKKISFPG--TKIQLK-------------------- 623
A E E +KL L N LE F G K+Q+K
Sbjct: 466 EIHTKAHAEIEEKESKLEQLKNVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDDSKSSRI 525
Query: 624 ------------PVLNKDNEVE-KVQFILKWGGEPTHSAHFQAEELGE---------QMR 661
L D VE + ILKWGGE T + QAEELG Q R
Sbjct: 526 SPNPSASINQSEANLAADQPVEPSLVLILKWGGELTPAGRIQAEELGRIFRCMYPGGQGR 585
Query: 662 QDFD--------LLNKNILHNIKIFSSSERRVLVSAQIWATALFGAD-EISSDEISIRKD 712
D+ L+ H++KI++S E RV ++A +A L + E++ + + K
Sbjct: 586 SDYSGTQGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKS 645
Query: 713 -----LLD---DSNAAXXXXXXXXXXXXXXXRMGKEAPPQFAWPA---KMPEPYLVIKRV 761
LLD DS+ R + + P + + +K
Sbjct: 646 ANTNGLLDNDCDSSKYQNLAKGRLHELMQNDREFSKEDRELINPCNSKSITQALDFVKNP 705
Query: 762 VDLMNY-HKKIMD--HNFATK--NVEEMQTCWCCAEDSMLFKERWDKLFKEFVTVDKV-D 815
VD ++ H I + H + K + + E L + RW+K+ K+F T K+ D
Sbjct: 706 VDCCHHVHLLIRELLHIISIKKDDPKTKDAILYHGETWDLMRCRWEKIEKDFSTKSKLFD 765
Query: 816 PSKISELYDTMKYDALHNRQFLEH 839
SKI ++YD +KYD HN+ L++
Sbjct: 766 ISKIPDIYDCIKYDLQHNQHTLQY 789
Score = 59.3 bits (142), Expect = 3e-08
Identities = 49/159 (30%), Positives = 71/159 (43%), Gaps = 33/159 (20%)
Query: 925 KFIQLRELFKLSKVLFDFICPQEYGIEDNEKLDIGLLTSLPLAKQIFNDI--------DE 976
++ Q EL+ +K L D + PQEYG+ EKL IG PL ++I D+ DE
Sbjct: 788 QYDQAEELYIYAKNLADIVIPQEYGLTPQEKLAIGQGICSPLLRKIKGDLQRNIDEVEDE 847
Query: 977 MKKKDTP-------------ACVAYFTKESHIYTLLNIIYESGLPMRIA----RNAL--- 1016
+ P YFT ESH+++LL ++ GL + R A+
Sbjct: 848 FMNRLNPHYSHGVASPQRHVRTRLYFTSESHVHSLLTVLRYGGLLNVVTDEQWRRAMDYI 907
Query: 1017 ---PEFDYLSQINFELYE--STDASGNKSHAVRLKMSPG 1050
E +Y+SQI LYE + D + + V L SPG
Sbjct: 908 SMVSELNYMSQIVIMLYEDPTKDPTSEERFHVELHFSPG 946
>CE26919 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 1339
Score = 350 bits (897), Expect = 9e-96
Identities = 266/785 (33%), Positives = 383/785 (47%), Gaps = 141/785 (17%)
Query: 186 IGVCAMDAKVLSKPCRHILNRLIE-HGEF-ETIIFGDKVILDESIENWPTCDFLISFFSN 243
IG+CAM+ K SKP R I+ ++I+ +G++ ++ IF ++VI++E +ENWP C L+SF S
Sbjct: 19 IGICAMNRKATSKPMRAIMKKIIDFYGQWVDSFIFPEQVIINEPVENWPLCHCLVSFHST 78
Query: 244 GFPLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRDGGPKID 303
FPLEKAI YVKLR PY+IN+L Q L DRR ++L+ + + P + R + D
Sbjct: 79 EFPLEKAIAYVKLRNPYVINNLDRQYDLLDRRTVFKILSDNGIEHPRHGYVIRGRPNEPD 138
Query: 304 DELKSMLAERGVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSK 363
EL V+ P D +EV G+V KPFVEKP+ EDHN+YIYY S
Sbjct: 139 TEL-------------VEHP-------DHIEVNGEVFNKPFVEKPISSEDHNVYIYYPSS 178
Query: 364 NGGGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDVKAYTVGETFCHAET 423
GGG +RLFRK+ N+SS + P + R EGSYIYE+F+ D DVK Y VG + HAE
Sbjct: 179 VGGGSQRLFRKINNRSSWYSPKS-EVRKEGSYIYEEFIPADG-TDVKVYAVGPFYAHAEA 236
Query: 424 RKSPVVDGIVRRNTHGKEIRYITELSPEEKEMARQVSKTFAQMICGFDLLRVEGKSYVID 483
RK+P +DG V R++ GKE+RY LS +EK++A+++ F Q +CGFDLLR GKSYV D
Sbjct: 237 RKAPGLDGKVERDSDGKEVRYPVILSNKEKQIAKKIVLAFGQTVCGFDLLRANGKSYVCD 296
Query: 484 VNGFSFVKDNTEYYDACAKILRDTF---YNAKK------------LMDLEKRNLPAIQEE 528
VNGFSFVK +T+YY+ AKIL + Y K ++DL + P +
Sbjct: 297 VNGFSFVKTSTKYYEDTAKILGNQIVRHYAKSKNWRVPSDMPQPPILDLGLGDDPPMITT 356
Query: 529 KTQKWV-FKGLVTVIRHADRTPKQKLKHSFTSPIFLSLLKGH----KEEVVIRNINDLQI 583
+ K + +V VIRH DRTPKQK+K T F +L + + K E+ ++ N L
Sbjct: 357 PSGKLAELRCVVAVIRHGDRTPKQKMKLIVTDQRFFALFEKYDGYKKHEIKMKKPNQLME 416
Query: 584 VLQ---ALKIAQEENA---------------------------EDPAKLAVLANALEKKI 613
VL+ AL I ++ + E+ K + LE
Sbjct: 417 VLELARALVIEKQRDRHQILEKLREGTGEEEIHKSEHDLEVCEEEMKKWEQMRTVLEMYG 476
Query: 614 SFPGT--KIQLKPVLNKDNEVEKVQF---------ILKWGGEPTHSAHFQAEELGEQMRQ 662
F G K+Q+K + ++ + + ILKWGGE T + + QAE LG R
Sbjct: 477 HFSGINRKVQMKYLKERETKTSDEELRREGPALLLILKWGGELTTAGNMQAEALGRLFRT 536
Query: 663 --------------------DFDLLNKNILHNIKIFSSSERRVLVSAQIWATALFGAD-E 701
F L+ H++KI++S E RV +A +A L + E
Sbjct: 537 LYPGIRRTDGKSSPEDTQGLGFLRLHSTYRHDLKIYASDEGRVQTTAAAFAKGLLALEGE 596
Query: 702 ISSDEISIRKD-----LLDDSNAAXXXXXXXXXXXXXXXRMGKEAPPQFAWPAKMPEPYL 756
++ + + K LLDD A + ++ PQ + P
Sbjct: 597 LTPILMQMVKSANTDGLLDDDCQARLYQTELKRYLHKALQADRDFTPQ-DYLELNPNGLR 655
Query: 757 VIKRVVDLMNYHKKIMDHNFATKNVEEMQTCWCCAEDSM---------------LFKERW 801
I ++ + +K M H A VE+M C E S L + RW
Sbjct: 656 AITAAMEFIKNPRK-MCHEIA-GYVEKM--CGVIVEYSQTRPTGSTLYLQESMDLAQRRW 711
Query: 802 DKLFKEFVTVDK-----VDPSKISELYDTMKYDALHNRQFLEHIFMPDDDTEVENEEVCH 856
+K +EF +K D SKI ++YD +KYD HN +++ E E VC
Sbjct: 712 NKELREFRRKNKHGEVEFDISKIPDIYDNIKYDMEHNPD-----LCINNEVEFERMYVCV 766
Query: 857 HSLVD 861
++ D
Sbjct: 767 KNMAD 771
Score = 52.0 bits (123), Expect = 5e-06
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Query: 927 IQLRELFKLSKVLFDFICPQEYGIEDNEKLDIGLLTSLPLAKQIFND----IDEMKKKDT 982
++ ++ K + D + PQEYGI+ K+ I PL ++I ND ++ + ++T
Sbjct: 757 VEFERMYVCVKNMADIVVPQEYGIKTENKMVIAQRVCTPLLRKIRNDLHRCLENKESEET 816
Query: 983 PACV------------------AYFTKESHIYTLLNIIYESGL------PMRIARNAL-- 1016
+ YFT ESHI+TL+N+I L + A N L
Sbjct: 817 QTRLDPRASQGIATPFRHVRTRLYFTSESHIHTLMNLIRYGNLCSVDDKKWQRAMNFLSG 876
Query: 1017 -PEFDYLSQINFELYEST-----DASGNKSHAVRLKMSPGCH 1052
EF+Y++Q+ +YE + +A + + SPG +
Sbjct: 877 VTEFNYMTQVVLMVYEDSRKENDEADTGPRFHIEILFSPGLY 918
>At3g01310 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 1015
Score = 343 bits (879), Expect = 1e-93
Identities = 252/724 (34%), Positives = 349/724 (47%), Gaps = 141/724 (19%)
Query: 218 FGDKVILDESIENWPTCDFLISFFSNGFPLEKAIKYVKLRKPYIINDLIMQKVLWDRRLC 277
FGDKVIL++ IE+WP CD LI+F S+G+PLEKA Y LRKP+++N+L Q +L DRR
Sbjct: 17 FGDKVILEDPIESWPICDCLIAFHSSGYPLEKAQAYAALRKPFLVNELDPQYLLHDRRKV 76
Query: 278 LRLLAASNVPTPPRLEITRDGGPKIDDELKSMLAERGVIVSTVQEPNWRMVDDDTLEVEG 337
L +P P + R K+ + Q+ ++ + ++D +EV G
Sbjct: 77 YEHLEMYGIPVPRYACVNR----KVPN----------------QDLHYFVEEEDFVEVHG 116
Query: 338 KVMTKPFVEKPVDGEDHNIYIYYHSKNGGGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIY 397
+ KPFVEKPV+G+DH+I IYY S GGG + LFRK+GN+SSEF P + + R EGSYIY
Sbjct: 117 ERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKELFRKIGNRSSEFHPDVRRVRREGSYIY 176
Query: 398 EKFMDTDNFEDVKAYTVGETFCHAETRKSPVVDGIVRRNTHGKEIRYITELSPEEKEMAR 457
E+FM T DVK YTVG + HAE RKSPVVDG+V RNT GKE+RY L+P EK+MAR
Sbjct: 177 EEFMATGG-TDVKVYTVGPEYAHAEARKSPVVDGVVMRNTDGKEVRYPVLLTPAEKQMAR 235
Query: 458 QVSKTFAQMICGFDLLRVEGKSYVIDVNGFSFVKDNTEYYDACAKILRDTFYNAK--KLM 515
+V F Q +CGFDLLR EG SYV DVNG+SFVK++ +YYD A +LR +AK L
Sbjct: 236 EVCIAFRQAVCGFDLLRSEGCSYVCDVNGWSFVKNSYKYYDDAACVLRKMCLDAKAPHLS 295
Query: 516 DLEKRNLPAIQEEKT------------------QKWVFKGLVTVIRHADRTPKQKLKHSF 557
LP E Q + ++ V+RH DRTPKQK+K
Sbjct: 296 STLPPTLPWKVNEPVQSNEGLTRQGSGIIGTFGQSEELRCVIAVVRHGDRTPKQKVKLKV 355
Query: 558 TSPIFLSLLKGH-----KEEVVIRNINDLQIVLQALKI--------AQEENAEDPAKLAV 604
T L+L+ + + E +++ LQ +L A ++ + E+ E KL
Sbjct: 356 TEEKLLNLMLKYNGGKPRAETKLKSAVQLQDLLDATRMLVPRRESDSDAEDLEHAEKLRQ 415
Query: 605 LANALEKKISFPG--TKIQLKPV-------LNKDNEVEK---VQFILKWGGEPTHSAHFQ 652
+ LE+ F G K+QLKP+ + D E E+ +LK+GG TH+ Q
Sbjct: 416 VKAVLEEGGHFSGIYRKVQLKPLKWVKIPKSDGDGEEERPVEALMVLKYGGVLTHAGRKQ 475
Query: 653 AEELGEQMRQDFD--------LLNKNILHNIKIFSSSERRVLVSAQIWATALFGAD---- 700
AEELG R + L+ H++KI+SS E RV +SA +A L +
Sbjct: 476 AEELGRYFRNNMYPGEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLT 535
Query: 701 EISSDEISIRKDLLDDSNAAXXXXXXXXXXXXXXXRMGKE-------APPQFAW---PAK 750
I +S +LD + A G + + F W A
Sbjct: 536 PILVSLVSKDSSMLDGLDNASIEMEAAKARLNEIVTSGTKMIDDDQVSSEDFPWMTDGAG 595
Query: 751 MPEPYLVIKRVVDLMNYHKKIMDHNFATKNVEEMQTCWCCAEDS---------------- 794
+P N H+ + + TKNV E ED
Sbjct: 596 LPP------------NAHELLRELVKLTKNVTEQVRLLAMDEDENLTEPYDIIPPYDQAK 643
Query: 795 -----------------------MLFKERWDKLFKEFVT--VDKVDPSKISELYDTMKYD 829
+L RW KL ++ D+ D ++I ++YD+ KYD
Sbjct: 644 ALGKTNIDSDRIASGLPCGSEGFLLMFARWIKLARDLYNERKDRFDITQIPDVYDSCKYD 703
Query: 830 ALHN 833
LHN
Sbjct: 704 LLHN 707
>At5g15070 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 1030
Score = 331 bits (848), Expect = 5e-90
Identities = 242/701 (34%), Positives = 343/701 (48%), Gaps = 122/701 (17%)
Query: 230 NWPTCDFLISFFSNGFPLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTP 289
+WP CD LI+F+S+G+PLEK Y LRKP+++N+L Q +L DRR L +P P
Sbjct: 46 SWPICDCLIAFYSSGYPLEKVQAYSSLRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVP 105
Query: 290 PRLEITRDGGPKIDDELKSMLAERGVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPV 349
+ R K+ DE E ++D +EV+G+ KPFVEKPV
Sbjct: 106 RYACVNR----KVPDEDLDYFVE----------------EEDFVEVKGERFWKPFVEKPV 145
Query: 350 DGEDHNIYIYYHSKNGGGGRRLFRKVGNKSSEFDPTLIQPRTEGSYIYEKFMDTDNFEDV 409
+G+DH+I IYY S GGG + LFRKVGN+SSEF P + + R EGSYIYE+FM T DV
Sbjct: 146 NGDDHSIMIYYPSSAGGGMKELFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGG-TDV 204
Query: 410 KAYTVGETFCHAETRKSPVVDGIVRRNTHGKEIRYITELSPEEKEMARQVSKTFAQMICG 469
K YTVG + HAE RKSPVVDG+V RN GKE+RY L+P EK+MAR+V F Q +CG
Sbjct: 205 KVYTVGPEYAHAEARKSPVVDGVVMRNPDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCG 264
Query: 470 FDLLRVEGKSYVIDVNGFSFVKDNTEYYDACAKILRDTFYNAK--------------KLM 515
FDLLR EG SYV DVNG+SFVK++ +YYD A +LR F +AK K+
Sbjct: 265 FDLLRSEGSSYVCDVNGWSFVKNSYKYYDDAACVLRKMFLDAKAPHLSSTIPPILPWKIN 324
Query: 516 DLEKRNLPAIQEEK------TQKWVFKGLVTVIRHADRTPKQKLKHSFTSPIFLSLLKGH 569
+ + N ++ Q + ++ ++RH DRTPKQK+K T L+L+ +
Sbjct: 325 EPVQSNEGLTRQGSGIIGTFGQSEELRCVIAIVRHGDRTPKQKVKLKVTEEKLLNLMLKY 384
Query: 570 -----KEEVVIRNINDLQIVLQALKI-----------AQEENAEDPAKLAVLANALEKKI 613
+ E ++ LQ +L A ++ + E+ E KL + LE+
Sbjct: 385 NGGKPRAETKLKTAVQLQDLLDATRMLIPRARSGESDSDAEDLEHADKLRQVKAVLEEGG 444
Query: 614 SFPG--TKIQLKP-----VLNKDNEVEKVQ-----FILKWGGEPTHSAHFQAEELGEQMR 661
F G K+QLKP V D E E+ + +LK+GG TH+ QAEELG R
Sbjct: 445 HFSGIYRKVQLKPLKWVNVPKSDGEGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFR 504
Query: 662 QDFD--------LLNKNILHNIKIFSSSERRVLVSAQIWATALF---------------- 697
+ L+ H++KI+SS E RV +SA +A L
Sbjct: 505 NNMYPGEGTGLLRLHSTYRHDLKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSK 564
Query: 698 ------GADEISSDEISIRKDLLDDSNAAXXXXXXXXXXXXXXXRMGKEAPPQFAWPAKM 751
G D SS+ + + L + A G PP A
Sbjct: 565 DSSMLDGLDNASSEMEAAKAQLNEIITAGSKMVHDHVSSELPWMTDGAGLPPH----ADE 620
Query: 752 PEPYLVIKRVVDL-MNYHKKIMDHN-------------FATKNVEEMQTCW---CCAEDS 794
P LV ++V L + H+ + + + N++ + C +E
Sbjct: 621 HLPELVTEQVRLLAQDEHENLAEPSAYDVVPPYDQAKALGKSNIDVGRIAAGLPCGSEGF 680
Query: 795 MLFKERWDKLFKEFVTV--DKVDPSKISELYDTMKYDALHN 833
+L RW KL ++ ++ D ++I ++YD+ KYD LHN
Sbjct: 681 LLMFARWRKLERDLYNERRERFDITQIPDVYDSCKYDLLHN 721
>Hs18547235 [Z] KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1 involved
in regulation of actin cytoskeleton
Length = 440
Score = 141 bits (355), Expect = 7e-33
Identities = 76/196 (38%), Positives = 109/196 (54%), Gaps = 22/196 (11%)
Query: 186 IGVCAMDAKVLSKPCRHILNRLIEHGEFETIIFGDKVILDESIENWPTCDFLISFFSNGF 245
+G+C+M K SKP + IL + ++F ++VIL E +ENWP CD L S S GF
Sbjct: 43 VGICSMAKKSKSKPMKEILEWVSLFKYITVVVFEEEVILREPVENWPLCDCLFSLHSKGF 102
Query: 246 PLEKAIKYVKLRKPYIINDLIMQKVLWDRRLCLRLLAASNVPTPPRLEITRD-GGPKIDD 304
PL+K + Y KLR P++INDL MQ ++ D R +L A + P + RD PK +
Sbjct: 103 PLDKVVAYAKLRNPFVINDLNMQYLIQDWREVYSILQAEVILLPCYAILNRDPNNPKECN 162
Query: 305 ELKSMLAERGVIVSTVQEPNWRMVDDDTLEVEGKVMTKPFVEKPVDGEDHNIYIYYHSKN 364
++ +D +EV +V KPFVEKPV EDHN+YIYY +
Sbjct: 163 LIEG---------------------EDHVEVNEEVFQKPFVEKPVSAEDHNVYIYYPTSA 201
Query: 365 GGGGRRLFRKVGNKSS 380
G G +RLFRK+G++++
Sbjct: 202 GSGSQRLFRKIGSRNT 217
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,127,538
Number of Sequences: 60738
Number of extensions: 3102864
Number of successful extensions: 8157
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8078
Number of HSP's gapped (non-prelim): 31
length of query: 1140
length of database: 30,389,216
effective HSP length: 117
effective length of query: 1023
effective length of database: 23,282,870
effective search space: 23818376010
effective search space used: 23818376010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)