ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0726 check: MH R KOG1539 General function prediction only WD repeat protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0726 254447 257272 942
(942 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR409c [R] KOG1539 WD repeat protein 1249 0.0
SPCC1672.07 [R] KOG1539 WD repeat protein 621 e-177
Hs21281677 [R] KOG1539 WD repeat protein 422 e-117
At4g04940 [R] KOG1539 WD repeat protein 374 e-103
7299761 [R] KOG1539 WD repeat protein 362 2e-99
CE25731 [R] KOG1539 WD repeat protein 137 1e-31
ECU06g0370i [R] KOG1539 WD repeat protein 102 3e-21
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 66 2e-10
CE29339 [S] KOG0295 WD40 repeat-containing protein 65 6e-10
CE11748 [R] KOG0266 WD40 repeat-containing protein 64 1e-09
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 62 3e-09
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 60 1e-08
7290331 [R] KOG0266 WD40 repeat-containing protein 60 2e-08
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 60 2e-08
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 60 2e-08
CE00901 [R] KOG0266 WD40 repeat-containing protein 60 2e-08
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 60 2e-08
Hs13376840 [R] KOG4155 FOG: WD40 repeat 59 3e-08
7299285 [R] KOG4155 FOG: WD40 repeat 59 3e-08
YCR084c [R] KOG0266 WD40 repeat-containing protein 58 6e-08
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 57 1e-07
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 57 2e-07
At3g49660 [R] KOG0266 WD40 repeat-containing protein 56 3e-07
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 56 3e-07
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 55 5e-07
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 55 5e-07
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 55 7e-07
CE06574 [R] KOG0266 WD40 repeat-containing protein 54 9e-07
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 1e-06
7292737 [A] KOG0285 Pleiotropic regulator 1 54 1e-06
At4g02730 [R] KOG0266 WD40 repeat-containing protein 53 2e-06
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 53 3e-06
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 52 3e-06
At3g42660 [R] KOG1274 WD40 repeat protein 52 3e-06
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 52 3e-06
7302720 [R] KOG0266 WD40 repeat-containing protein 52 3e-06
7300458 [R] KOG0275 Conserved WD40 repeat-containing protein 52 3e-06
CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 52 4e-06
7301430 [B] KOG0639 Transducin-like enhancer of split protein (c... 52 4e-06
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 52 6e-06
7302600 [R] KOG4155 FOG: WD40 repeat 52 6e-06
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 51 7e-06
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 51 7e-06
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 51 7e-06
7302708 [J] KOG0650 WD40 repeat nucleolar protein Bop1 involved ... 51 7e-06
HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein... 51 1e-05
Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein... 51 1e-05
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 51 1e-05
At4g29830 [R] KOG4155 FOG: WD40 repeat 51 1e-05
>YLR409c [R] KOG1539 WD repeat protein
Length = 939
Score = 1249 bits (3233), Expect = 0.0
Identities = 614/944 (65%), Positives = 757/944 (80%), Gaps = 8/944 (0%)
Query: 1 MTVDGSLKKRRVGSSGAVRKHASRIFSPYRIVGNVSTGVPYAIGTLGTTFYIVTSVGKSF 60
M++D LKKR+V R S+IFSP+RI+GNVS GVP+A GTLG+TFYIVT VGK+F
Sbjct: 1 MSID--LKKRKVEEDVRSRGKNSKIFSPFRIIGNVSNGVPFATGTLGSTFYIVTCVGKTF 58
Query: 61 QIFDANNLHLLFVSDKETEGDITCLAAHFHYVYASFKNKVGIYKRGKLEHLIELPDPNTV 120
QI+DAN LHLLFVS+KET I L+AHFHYVYA+++NKVGIYKRG EHL+EL + +
Sbjct: 59 QIYDANTLHLLFVSEKETPSSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLEL-ETDAN 117
Query: 121 VTKINVFGEYLIASTDNNVVYIYKKNSPSDKFATELYTNFTIGKLQGGDIVDLVHLPTYV 180
V + +FG+YL ASTD+N ++IYKK+ P DK+ +E YT T+ ++QGG+IV L HL TY+
Sbjct: 118 VEHLCIFGDYLCASTDDNSIFIYKKSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYL 177
Query: 181 NKLLVVTKSNFTLFNVRTGKQLYTSDEFPDEITTAEPAPALDIVAFGTSSGEVILFNLRK 240
NKL VVTKSN LFNVRTGK ++TS+EFPD+ITTAEPAP LDI+A GT +GEVI+FN+RK
Sbjct: 178 NKLTVVTKSNVLLFNVRTGKLVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRK 237
Query: 241 GKKIRTIKTP-TRISSISFRTDGASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNGG 299
GK+IRTIK P +RISS+SFRTDG+SH+SV ++SGDLIFYDLD RSR+ VLK IH+E GG
Sbjct: 238 GKRIRTIKIPQSRISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGG 297
Query: 300 VARASFLNGQPIVVTCGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSRGGHSQPPSSIA 359
V +A+FLNGQPI+VT GGDN LKE+VFDPSLSQG +VV+QP R LRSRGGHSQPPS IA
Sbjct: 298 VTQATFLNGQPIIVTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIA 357
Query: 360 FADDQSHFILSASKDRSLWGFSLRKDAQSQELSQRLHKNKDGNRIGGSTIGEKFPEITSI 419
FAD QSHF+LSASKDRSLW FSLRKDAQSQE+SQRLHK +DG R+GGSTI KFPEI ++
Sbjct: 358 FADSQSHFMLSASKDRSLWSFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVAL 417
Query: 420 VIENNRQGQWENILTVHKGEKFARTWNSRTKRVGRWTIPTNDEGFAKSVAISQCGNFGLV 479
IEN R G+WENI+T HK EKFARTW+ R KRVGRWT T D+GF KSVA+SQCGNFG +
Sbjct: 418 AIENARIGEWENIITAHKDEKFARTWDMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFI 477
Query: 480 GSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFL 539
GSSNG I+++N+QSG RK Y+LHK+AVTGI++DGMNRKMVSCGLDGIVGFYDF+KST L
Sbjct: 478 GSSNGSITIYNMQSGILRKKYKLHKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLL 537
Query: 540 GKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDG 599
GKLKLD+PIT+MVYHR TQ+VVRQLWGHSNRI++FDFSP+G
Sbjct: 538 GKLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEG 597
Query: 600 RWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLATTSVSGNGISLWANR 659
RWIVS+SLDSTIRTWDLPTGGCIDG+ V+NV TN+KFSPNGDLLATT V+GNGI +W NR
Sbjct: 598 RWIVSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNR 657
Query: 660 AQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGAFDTE--EDDSEDLFGKYDSMEQID 717
AQF +VSTR IDE EFA + LP+ S G + L GA ++ ED ++ F Y S+EQID
Sbjct: 658 AQFKTVSTRTIDESEFARMALPSTSVRGNDSMLSGALESNGGEDLNDIDFNTYTSLEQID 717
Query: 718 KDLLTLSLGPRNKMNILLNLDIIKQRSKPKEAPVKPEQAPFFLQLAKDKVGDEASAREGA 777
K+LLTLS+GPR+KMN LL+LD+I++RSKPKEAP K E+ PFFLQL+ +KVGDEAS REG
Sbjct: 718 KELLTLSIGPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFLQLSGEKVGDEASVREGI 777
Query: 778 ENLSLDSSKLQQERNAAKANAASELNKFKPSGKLGAQFESDFTKLLREGSQKNDYSAFLD 837
+ + + + + K +A ++NKFK +G+LG FES FTK LREGSQ DYS+ L
Sbjct: 778 AHETPEEIHRRDQEAQKKLDAEEQMNKFKVTGRLG--FESHFTKQLREGSQSKDYSSLLA 835
Query: 838 ELVQMTPSNIDLEIRSLKAFQPFDELCRFIESLAQGLATNKNFELYEAYITILFRVHGDV 897
L+ +P+ +DLEIRSL +F+PFDE+ FI++L QGL +NKNFELYE ++++LF+ HGDV
Sbjct: 836 TLINFSPAAVDLEIRSLNSFEPFDEIVWFIDALTQGLKSNKNFELYETFMSLLFKAHGDV 895
Query: 898 IHSNNTNQNIKTALQHWDTNHRKGQSLDELVKFCGSVLSFVSTS 941
IH+NN NQ+I +ALQ+W+ H+K LD+LVKFC V +FV+T+
Sbjct: 896 IHANNKNQDIASALQNWEDVHKKEDRLDDLVKFCMGVAAFVTTA 939
>SPCC1672.07 [R] KOG1539 WD repeat protein
Length = 902
Score = 621 bits (1602), Expect = e-177
Identities = 364/945 (38%), Positives = 543/945 (56%), Gaps = 60/945 (6%)
Query: 8 KKRRVGSSGAVRKHASRIFSPYRIVGNVSTGVPYAIGTLGTTFYIVTSVGKSFQIFDANN 67
KKRR + SRI++P+R +G+VS VP+ I GT F + TSVG +FQ +D
Sbjct: 6 KKRRTYENAVKPLRKSRIYAPFRSIGHVSNAVPFDIEARGTHFLVTTSVGNTFQTYDCEK 65
Query: 68 LHLLFVSDKETEGDITCLAAHFHYVYASFKNKVGIYKRGKLEHLIELPDPNTVVTKINVF 127
L+LLFV K+ + +ITCL + ++ + +K+ YKRGK+ I++ + VT ++ F
Sbjct: 66 LNLLFVG-KQLDKEITCLKSFKDFMLVAAGSKIFAYKRGKIIWDIDVEQEHGTVTHLDAF 124
Query: 128 GEYLIASTDNNVVYIYKKNSPSDKFATELYTNFTIGKLQGGDIVDLVHLPTYVNKLLV-V 186
GE++IA T + VY++K S EL+T F DI L+H TY+NK+L+
Sbjct: 125 GEWIIACTSSRHVYVWKHASKYS--VPELHTTFLPNT--NADITSLLHPSTYLNKILLGF 180
Query: 187 TKSNFTLFNVRTGKQLYTSDEF-PDEITTAEPAPALDIVAFGTSSGEVILFNLRKGKKIR 245
+ ++N+R K+++ EF D IT+ AP LD++A GT SG +++FNL+ G +
Sbjct: 181 SDGALQIWNLRVSKRVHEFQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILM 240
Query: 246 TIKTPTRISSISFRTDGASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNGGVARASF 305
K ++ S SFRTDG ++ ++ GDL F+DL R V H G + + F
Sbjct: 241 EFKQDGQVLSCSFRTDGTPILASSNPIGDLSFWDLSKRRIQNVTYNAHF---GSLPKIQF 297
Query: 306 LNGQPIVVTCGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSRGGHSQPPSSIAFADDQS 365
LNGQPI+VT G DN LKE++FD + R+LRSR GH +PPS + F
Sbjct: 298 LNGQPILVTAGPDNSLKEWIFDS---------MDGAPRILRSRNGHYEPPSFVKFYGKSV 348
Query: 366 HFILSASKDRSLWGFSLRKDAQSQELSQRLHKNKDGNRIGGSTIGEKFPEITSIVIENNR 425
HF++SA+ DRSL SL +D+QS ELSQ +K ++ K PEIT++ N R
Sbjct: 349 HFLISAATDRSLRAVSLYQDSQSTELSQGSVISK-AKKLNVRPEELKLPEITALSSSNTR 407
Query: 426 QGQWENILTVHKGEKFARTWNSRTKRVGRWTIPTNDEGFAKSVAISQCGNFGLVGSSNGG 485
+ W+N+LT HK + ARTWN ++K +G+ +PT+D +SV +S CGNFGL+GSS G
Sbjct: 408 EKYWDNVLTAHKNDSSARTWNWKSKTLGQHVLPTSDGTSVRSVCVSCCGNFGLIGSSKGV 467
Query: 486 ISVHNLQSGQKRKVY---RLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKL 542
+ V+N+QSG KRK + L K VT + +D +NR +V+ LDGI+ F+DF+K + L
Sbjct: 468 VDVYNMQSGIKRKSFGQSSLSGKPVTAVMLDNVNRILVTASLDGILKFWDFNKGNLIDSL 527
Query: 543 KLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWI 602
+ S IT +Y T+K+VR+LWGHSNR++SFDFS GRW+
Sbjct: 528 DVGSSITHAIYQHSSDLVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWL 587
Query: 603 VSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLATTSVSGNGISLWANRAQF 662
V++SLD TIRTWDLPTG ID + +V T++ F+P GD LATT V GISLW N + F
Sbjct: 588 VTASLDGTIRTWDLPTGHLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLSMF 647
Query: 663 ISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGAFDTEE--DDSEDLFGKYDSMEQIDKDL 720
VST+ + ++ V P+VSG+ G + +E A + E +D ED+ Y +M+Q+D +L
Sbjct: 648 KHVSTKALRLDDVVEVSAPSVSGEKGISVVEAALNVESNAEDEEDI--SYRTMDQLDPNL 705
Query: 721 LTLSLGPRNKMNILLNLDIIKQRSKPKEAPVKPEQAPFFLQLAKDKVGDEASAREGAENL 780
TLS PR + L+NL+ IK R+ PKE P PE+APFFL KD
Sbjct: 706 QTLSKLPRTQWQTLINLEAIKARNAPKEVPKVPEKAPFFLPSLKD--------------- 750
Query: 781 SLDSSKLQQERNAAKANAASELNKFKPSGKLGAQFE-SDFTKLLREGSQKNDYSAFLDEL 839
Q E K A+E++ KP+ + ++F+ LL ND AF + L
Sbjct: 751 -------QSEATVPKQPIATEIS--KPTAVASIKVSGTEFSTLL----HGNDDDAFFEYL 797
Query: 840 VQMTPSNIDLEIRSLKAFQPFDELCRFIESLAQGLATNKNFELYEAYITILFRVHGDVIH 899
+ P+ IDLEIRSL A+ P++E FI + + L+ ++FEL +A +++ + H DV+
Sbjct: 798 KSLGPAKIDLEIRSLDAYPPYEEFILFINIMTRRLSKRRDFELVQACMSVFTKSHEDVLL 857
Query: 900 SNNTNQN---IKTALQHWDTNHR-KGQSLDELVKFCGSVLSFVST 940
++T ++ + +L+ W++ H+ + Q L +LV +C +LSF+ T
Sbjct: 858 MHDTPEDTVPVFESLKAWESVHKEENQRLLDLVGYCSGILSFMRT 902
>Hs21281677 [R] KOG1539 WD repeat protein
Length = 951
Score = 422 bits (1084), Expect = e-117
Identities = 280/891 (31%), Positives = 460/891 (51%), Gaps = 64/891 (7%)
Query: 19 RKHASRIFSPYRIVGNVSTGVPYAI--GTLGTTFYIVTSVGKSFQIFDANNLHLLFVSDK 76
R+ AS +F+ +R +G S +P+ + L FY+ T VGKSF +D L L+ VS+
Sbjct: 63 RRTASALFAGFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNS 122
Query: 77 ETEGDITCLAAHFHYVYASFKNKVGIYKRGKLEHLIELPDPNTVVTKINVFGEYLIASTD 136
+ DI C+AA V+A++ N + R K E + + + FG+++I+
Sbjct: 123 VPQ-DICCMAADGRLVFAAYGNVFSAFARNK-EIVHTFKGHKAEIHFLQPFGDHIISVDT 180
Query: 137 NNVVYIYKKNSPSDKFATELYTNFTIGKLQGGDIVDLVHLPTYVNKLLVVTKS-NFTLFN 195
+ ++ I+ ++ E Y T K I ++H TY+NK+L+ ++ + L+N
Sbjct: 181 DGILIIWHI------YSEEEYLQLTFDK-SVFKISAILHPSTYLNKILLGSEQGSLQLWN 233
Query: 196 VRTGKQLYTSDEFPDEITTAEPAPALDIVAFGTSSGEVILFNLRKGKKIRTIKTPTR-IS 254
V++ K LYT + +T + APA+D+VA G SG+VI+ N++ + + + I+
Sbjct: 234 VKSNKLLYTFPGWKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDWGPIT 293
Query: 255 SISFRTDGASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNGGVARASFLNGQPIVVT 314
SISFRTDG ++ S G + +DL+ + + ++ H G+ +FL+ +P++VT
Sbjct: 294 SISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGL---TFLHREPLLVT 350
Query: 315 CGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSRGGHSQPPSSIAFADDQSHFILSASKD 374
G DN L+ ++FD +G RLLR R GHS P ++I + ILSAS+D
Sbjct: 351 NGADNALRIWIFDGPTGEG---------RLLRFRMGHSAPLTNIRYYGQNGQQILSASQD 401
Query: 375 RSLWGFSLRKDAQSQELSQRLHKNKDGNRIG-GSTIGEKFPEITSIVIENNRQGQWENIL 433
+L FS + ++ L L K R G +T+ + P IT E R+ W+ I+
Sbjct: 402 GTLQSFSTVHEKFNKSLGHGLINKKRVKRKGLQNTMSVRLPPITKFAAEEARESDWDGII 461
Query: 434 TVHKGEKFARTWNSRTKRVGRWTIPTN----DEGFAKSVAISQCGNFGLVGSSNGGISVH 489
H+G+ TWN + +G + + D+ A +V I+ CGNF ++G S+G + V+
Sbjct: 462 ACHQGKLSCSTWNYQKSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVY 521
Query: 490 NLQSGQKRKVY---RLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLDS 546
N+QSG R + + HK +V G+A+DG+N+ V+ G +G++ F++F + + L S
Sbjct: 522 NMQSGIHRGSFGKDQAHKGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKNKILIHSVSLSS 581
Query: 547 PITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSS 606
M+ HR T+K+VR+ GH +I+ FSPDGRW++S++
Sbjct: 582 SPNIMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAA 641
Query: 607 LDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLATTSVSGNGISLWANRAQFISVS 666
+D +IRTWDLP+G ID +++ N+ SP GD LAT+ V GI LW+N + + VS
Sbjct: 642 MDCSIRTWDLPSGCLIDCFLLDSAPLNVSMSPTGDFLATSHVDHLGIYLWSNISLYSVVS 701
Query: 667 TRQIDEEEF-ATVMLPNVSGDGGSNFLEGAFDTEEDDSEDLFGKYDSMEQIDKDLLTLSL 725
R + + + VMLP G + +E + +T E E + +YDS EQ+++ L+TLSL
Sbjct: 702 LRPLPADYVPSIVMLP---GTCQTQDVEVSEETVEPSDELI--EYDSPEQLNEQLVTLSL 756
Query: 726 GPRNKMNILLNLDIIKQRSKPKEAPVKPEQAPFFLQLAKDKVGDEASAREGAENLSLDSS 785
P ++ LLNLD+IK+++KPKE P P+ APFF+ V A
Sbjct: 757 LPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYA-------------- 802
Query: 786 KLQQERNAAKANAASELNKFKPSGKLGAQFESDFTKLLREGSQKNDYSAFLDELVQMTPS 845
A + N + +K G L +SDF L EG N Y L+ L + PS
Sbjct: 803 -------APEQNNDPQQSKVVNLGVLAQ--KSDFCLKLEEGLVNNKYDTALNLLKESGPS 853
Query: 846 NIDLEIRSLK--AFQPFDELCRFIESLAQGLATNKNFELYEAYITILFRVH 894
I+ E+RSL + + F++ + L ++FEL +AY+ + ++H
Sbjct: 854 GIETELRSLSPDCGGSIEVMQSFLKMIGMMLDRKRDFELAQAYLALFLKLH 904
>At4g04940 [R] KOG1539 WD repeat protein
Length = 931
Score = 374 bits (959), Expect = e-103
Identities = 277/970 (28%), Positives = 472/970 (48%), Gaps = 96/970 (9%)
Query: 25 IFSPYRIVGNVSTGVPYAIGTLGTTFYIVTSVGKSFQIFDANNLHLLFVSD------KET 78
IF P+R +G +++ VP+++ LGT ++ SVGK+FQI++ L+L+ +S +
Sbjct: 3 IFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISKFFLLLKPKL 62
Query: 79 EGDITCLAAHFHYVYASFKNKVGIYKRGKLEHLIELPDPNTV-VTKINVFGEYLIASTDN 137
I LA++ Y + +F N++ +++R H + + V + VFGE++++
Sbjct: 63 PKKIRALASYRDYTFVAFGNEIAVFRRA---HQVATWSKHVAKVDLLLVFGEHVLSLDVE 119
Query: 138 NVVYIYKKNSPSDKFATELYTNFTIGKLQ-GGDIV--DLVHLPTYVNKLLVVTKSN-FTL 193
++I+ + A IG LQ G +VH TY+NK+LV ++ L
Sbjct: 120 GNMFIWAFKGIEEHLAP-------IGNLQLTGKFTPTSIVHPDTYLNKVLVGSQEGPLQL 172
Query: 194 FNVRTGKQLYTSDEFPDEITTAEPAPALDIVAFGTSSGEVILFNLRKGKKIRTIKTPTR- 252
+N+ T K LY + +T+ +PALD+VA G + G++ + N++ ++I T + +R
Sbjct: 173 WNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRG 232
Query: 253 -ISSISFRTDGASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNGGVARASFLNGQPI 311
++++SF TDG ++ + G + ++L+ + V++ H + + +FL +P+
Sbjct: 233 AVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAH---DSSIISLNFLANEPV 289
Query: 312 VVTCGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSRGGHSQPPSSIAFADDQSHFILSA 371
+++ DN LK ++FD + GD RLLR R GHS PP I F + H ILSA
Sbjct: 290 LMSASADNSLKMWIFDTN--DGDP-------RLLRFRSGHSAPPLCIRFYSNGRH-ILSA 339
Query: 372 SKDRSLWGFSLRKDAQSQELSQRLHKNKDGNRIGGSTIGEKFPEITSIVIENNRQGQWEN 431
+DR+ FS+ ++ QS+ELSQR H ++ ++ K + S R+ W N
Sbjct: 340 GQDRAFRLFSVIQEQQSRELSQR-HISRRAKKLRLKEEELKLKPVVSFDCAEIRERDWCN 398
Query: 432 ILTVHKGEKFARTWNSRTKRVGRWTI------PTNDEGFAKS----------VAISQCGN 475
++T H A W + +G + PT +G S AIS CGN
Sbjct: 399 VVTCHMDTAEAYVWRLQNFVLGEHILKPCPENPTPIKGVFVSRNHLLLAILACAISACGN 458
Query: 476 FGLVGSSNGGISVHNLQSGQKRKVY--------RLHKKAVTGIAMDGMNRKMVSCGLDGI 527
F +VG++ G I NLQSG R Y H V G+A D N M+S G G
Sbjct: 459 FAVVGTAGGWIERFNLQSGISRGSYFDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGD 518
Query: 528 VGFYDFSKSTFLGKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHS 587
+ +DF K + + + +VYHR T K+VR+ GH+
Sbjct: 519 LKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHT 578
Query: 588 NRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLATTS 647
+RI+ FS DG+W++SSS+D ++R WD+ IDG+ V+ IT + SPN D+LAT
Sbjct: 579 DRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAH 638
Query: 648 VSGNGISLWANRAQFISVSTRQ--IDEEEFATVMLPNVSGDGGSNFLEGAFDTEEDDSED 705
NG+ LW N++ F + + + ++ V LP+VS S + ++SE
Sbjct: 639 SDQNGVYLWVNQSMFSGLPSVESYASGKDVVNVKLPSVSALTSSEADDDMDRQVLENSEA 698
Query: 706 LFGKYDSMEQID-KDLLTLSLGPRNKMNILLNLDIIKQRSKPKEAPVKPEQAPFFLQLAK 764
L S+ Q +L+TLSL P+++ L+NLDIIK R+KP E P KPE+APFFL
Sbjct: 699 LQASSFSISQKQIPELVTLSLLPKSQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSIP 758
Query: 765 DKVGDEASAREGAENLSLDSSKLQQERNAAKANAASELN--KFKPSGKLGAQFESDFTKL 822
GD + + N ++A+ +E N K + S K ES F+K
Sbjct: 759 SLSGD-----------------ILFKANDSEADGENEENNKKDQNSMKNFDALESPFSKH 801
Query: 823 LREGSQKNDYSAFLDELVQMTPSNIDLEIRSLKAFQ-----------PFDELCRFIESLA 871
L+ + F + + ++PS +D+E+R L+ F + + ++
Sbjct: 802 LKSSWDSKHFLDFTNYMKSLSPSALDMELRMLEIIDEDVEEELIKRPEFILIGQLLDYFI 861
Query: 872 QGLATNKNFELYEAYITILFRVHGDVIHSNNTNQNIKTALQHWDTNHRKGQSLDELVKFC 931
++ +FE +A + + ++HG+ I + + Q + A + +T Q +++L +
Sbjct: 862 NEVSCKNDFEFMQAVVKLFLKIHGETIRCHPSLQ--EKAKKLLETQSLVWQKMEKLFQST 919
Query: 932 GSVLSFVSTS 941
+++F+S S
Sbjct: 920 RCIVTFLSNS 929
>7299761 [R] KOG1539 WD repeat protein
Length = 922
Score = 362 bits (928), Expect = 2e-99
Identities = 271/908 (29%), Positives = 442/908 (47%), Gaps = 77/908 (8%)
Query: 17 AVRKHASRIFSPYRIVGNVSTGVPYAIGTLGTT--FYIVTSVGKSFQIFDANNLHLLFVS 74
+V K +S IF R +G VS VP + ++T +G+SFQ++ AN+ LL VS
Sbjct: 17 SVFKESSCIFRRNRALGYVSNQVPAVTRYVQRRRDTLLITCIGRSFQVYTANHFRLLHVS 76
Query: 75 DKETEGDITCLAAHFHYVYASFKNKVGIYKRGK-LEHLIELPDPNTVVTKINVFGEYLIA 133
+ +IT LA + Y + + ++ GK + H+ + V + FG LIA
Sbjct: 77 GLHPD-EITALATDRLHTYTASNKCIYAWRAGKHIRHVYRGHQKD--VHLLLPFGSSLIA 133
Query: 134 STDNNVVYIYKKNSPSDKFATELYTNFTIGKLQGGDIVDLVHLPTYVNKLLVVTKSN-FT 192
NV+ ++ ++ L F + Q I + H PTY+NK+++ ++
Sbjct: 134 IDRQNVLKVWNISTED----VYLEVPFRSEEFQ---ITAVTHPPTYINKIVLGSQQGQLK 186
Query: 193 LFNVRTGKQLYTSDEFPDEITTAEPAPALDIVAFGTSSGEVILFNLRKGKKIRTIKTPT- 251
+ N++ + T IT EP+PALD+VA G G +IL NL+ + + + +
Sbjct: 187 ILNIKKNSVVCTLSHHDSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDWG 246
Query: 252 RISSISFRTDGASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNGGVARASFLNGQPI 311
+++++SFRTDG + A ++G + F++L+ R L+ H+E V A L +P+
Sbjct: 247 QVTNLSFRTDGPPILVSACSNGYMAFWNLEERKLAGQLQA-HEE---SVTTAICLPSEPV 302
Query: 312 VVTCGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSRGGHSQPPSSIAFADDQSHFILSA 371
V T DN ++ FVFD + G AR LR R GH++PP I + ILS+
Sbjct: 303 VFTTSPDNSMRMFVFD--MPDGG-------ARQLRIREGHTKPPFCIRYHGSSGVSILSS 353
Query: 372 SKDRSLWGFSLRKDAQSQELSQRLHK---NKDGNRIGGSTIGEKFPEITSIVIENNRQGQ 428
+D ++ FS ++ ++ + + + K NR G P I + R+ +
Sbjct: 354 GEDSTMRVFSTISESLNKSMGRATYNPKATKKKNRFEHDKFG--MPPILEFTSDTAREKE 411
Query: 429 WENILTVHKGEKFARTWNSRTKRVGRWTIP---------TNDEGFAKSVAISQCGNFGLV 479
W+NI +H G TW+ R+G + TN + + ++ CGNF ++
Sbjct: 412 WDNIAAIHAGVIQTTTWSFGKNRMGEHRLVPKQFQNSNRTNFQNETTCIVLTHCGNFVII 471
Query: 480 GSSNGGISVHNLQSGQKRKVYR--LHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKST 537
G S+G I N+QSG R Y HK AV G+A D +N+ ++S +G++ F+ F
Sbjct: 472 GYSSGDIERFNIQSGLHRATYGSPAHKMAVRGLASDNLNQTVISGCSEGLLKFWSFKGKV 531
Query: 538 F--LGKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDF 595
L L+L I + HR T+ +VR+ GH+ +++ F
Sbjct: 532 DKPLATLRLADGIALIRQHRESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTF 591
Query: 596 SPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLATTSVSGNGISL 655
SPD RW++++++DSTI+ WD+P+ +D +VE ++ SPNGD LAT V GI L
Sbjct: 592 SPDSRWLITAAMDSTIKVWDIPSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIYL 651
Query: 656 WANRAQFISVSTRQIDEEEFAT-VMLPN-----VSGDGGSNFLEGAFDTEEDDSEDLFGK 709
WAN+ F +S R ID E A V LP + + G LE + E E + K
Sbjct: 652 WANKTLFNQISLRSIDPLEPAPYVGLPTNVCDAMELEDGMKELEIDEEDESKLGELVDTK 711
Query: 710 YDSMEQIDKDLLTLSLGPRNKMNILLNLDIIKQRSKPKEAPVKPEQAPFFLQLAKDKVGD 769
Y++ Q+ ++L+TLS ++ LL+L++IKQR+KPK P P+QAPFFL
Sbjct: 712 YETPTQLSEELITLSGLAASRWQNLLDLELIKQRNKPKAPPKAPKQAPFFLPTV------ 765
Query: 770 EASAREGAENLSLDSSKLQQERNAAKANAASELNKFKPSGKLGAQFESDFTKLLREGSQK 829
G E L D Q+E + ++ AS LN + F +LL E +
Sbjct: 766 -----SGLE-LRFDVENGQKEEDESRIRKASTLNNL-----------TAFGQLLEETADS 808
Query: 830 NDYSAFLDELVQMTPSNIDLEIRSL--KAFQPFDELCRFIESLAQGLATNKNFELYEAYI 887
D+++ + L Q+ PS +D EI+SL +A + +F++ + TN NFEL ++Y+
Sbjct: 809 LDFASAVAHLTQLGPSMVDFEIKSLHPEAGGTLLAMLQFLKLVKFMFGTNLNFELAQSYL 868
Query: 888 TILFRVHG 895
++ R HG
Sbjct: 869 SVFLRSHG 876
>CE25731 [R] KOG1539 WD repeat protein
Length = 897
Score = 137 bits (344), Expect = 1e-31
Identities = 163/751 (21%), Positives = 295/751 (38%), Gaps = 103/751 (13%)
Query: 205 SDEFPDEITT-AEPAPALDIVAFGTSSGEVILFNLRKGKKIRTIKTP--TRISSISFRTD 261
SD+F EIT P+ L+ + G+S+G + + N R GK I + +RI+ I +T
Sbjct: 143 SDDF--EITAICHPSTYLNKIVVGSSTGRMKIINFRTGKVIHEFQRSFDSRITIIE-QTT 199
Query: 262 GASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNGGVARASFLNGQPIVVTCGGDNQL 321
+ V +G+++ +++ + + K N +G+ +VT + +
Sbjct: 200 ALDVVVVGLENGEVMLFNVKMDKIITSFRHDAKITNVAFRD----DGESTMVTADKNGTM 255
Query: 322 KEFVFDPSLSQGDSEVVIQPARLLRSRGGHSQPPSSI---AFADDQSHFILSASKDRSLW 378
+ + S + L S Q + A+ D ++H +S ++ +
Sbjct: 256 AVWDLENS--------PLHWITLCVSGFSTVQMECHVNLSAWKDTRNHVPVSNLLEKITF 307
Query: 379 GFSLRKDA-QSQELSQRLHKNKDGNRIGGSTIGEKFPEITSIVIENNRQGQWENILTVHK 437
+ D + ++S + K G G + ++ + + R+ W N+
Sbjct: 308 CRPEKMDPFRKYDVSSLTMRQKLGTVGQGVKLNKEVQNVAEMAFGWQREAAWNNVFCRQV 367
Query: 438 GEKFARTWNSRTKRVGRWTIPTND--------EGFAKSVAISQCGNFGLVGSSNGGISVH 489
+ TW +R G +T+ + + A ++ +S CGNF +G S G I
Sbjct: 368 NDTKITTWQTRNNTSGAFTLEHDRFKKKVDFIDANATALCVSPCGNFVFIGYSTGHIDQF 427
Query: 490 NLQSGQ------------KRKVYRLHKKA------------------VTGIAMDGMNRKM 519
N QSG+ K K + +K +T +++D +++
Sbjct: 428 NAQSGRHVHSFTASTTVKKSKKSKNPRKGPTKTNGDIHNDTPAADSPITSLSVDQRGKEL 487
Query: 520 VSCGLDGIVGFYDFSKSTFLGKL-KLD--------SPITSMVYHRXXXXXXXXXXXXXXX 570
+S G + F+ S K+ K D P S+V
Sbjct: 488 MSTDAQGHILFWSLSTKAINAKMFKKDVRLGICAPCPSNSLV----ALVAIAENGKESVI 543
Query: 571 XXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENV 630
+V R N++++ FS DG+W++ + DS IR +D+ T ID +
Sbjct: 544 LVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLVADNDSYIRVFDVATSQLIDVLLFSKP 603
Query: 631 ITNIKFSPNGDLLATTSVSGNGISLWANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSN 690
++ ++ G LAT + WAN+ F++ + ++ + +GG+
Sbjct: 604 CISMSYNETGQYLATVHEGERAVYTWANKVLFVAHINIRAHPADYLPSWSMISTEEGGTC 663
Query: 691 FLEGAFDTEEDDSEDLFG---KYDSMEQIDKDLLTLSLGPRNKMNILLNLDIIKQRSKPK 747
+ D +EDD L K QID++L+T S P ++ L +L +IK+R+KP
Sbjct: 664 DI----DDDEDDLTTLMDQDIKAMKELQIDENLVTFSGLPSSRWANLPDLALIKERNKPT 719
Query: 748 EAPVKPEQAPFFLQLAKDKVGDEASAREGAENLSLDSSKLQQERNAAKANAASELNKFKP 807
+A K +QAPFFL + G E + + DS + +RN
Sbjct: 720 DAVKKIKQAPFFLSASATLDGFEFETENIGDEMDGDSRYITSKRNL-------------- 765
Query: 808 SGKLGAQFESDFTKLLREGSQKNDYSAFLDELVQMTPSNIDLEIRSLKAFQPFDELCRFI 867
+ ES FT LLR ++ L M+ S ID +IR+L + F
Sbjct: 766 -----LELESSFTTLLRNAKTRDHLLDAFKTLQNMSLSAIDFQIRTLNP----KTIPIFF 816
Query: 868 ESLAQGLATNKNFELYEAYITILFRVHGDVI 898
L + L T NFEL +AY ++H ++
Sbjct: 817 RMLLEVLKTKTNFELVQAYAATATKIHRTIM 847
Score = 75.9 bits (185), Expect = 3e-13
Identities = 63/274 (22%), Positives = 129/274 (46%), Gaps = 21/274 (7%)
Query: 18 VRKHASRIFSPYRIVGNVSTGVPYAIGTL----GTTFYIVTSVGKSFQIFDANNLHLLFV 73
+++ S +F+PYR +G V+ V +I + + ++ + ++ L + +
Sbjct: 1 MKRIQSELFAPYRFLGVVTGDVAPSIRSTFVAKKSALSVLCPIDNVIMQYNGKKLRAIGM 60
Query: 74 SDKETEGDITCLAAHFHYVYASFKNKVGIYKRGKLEHLIELPDPNTVVTKINVF---GEY 130
S+ ++ ++ +A+ V+A+ + L ++ D + KI + G
Sbjct: 61 SEPLSD-KVSAVASSSTSVFAAHGTNIT-----SLAFCRDIKDSIDLGAKIKIMTLIGTQ 114
Query: 131 LIASTDNNVVYIYKKNSPSDKFATELYTNFTIGKLQGGDIVDLVHLPTYVNKLLVVTKSN 190
LIA ++ +++ D L + + +I + H TY+NK++V + +
Sbjct: 115 LIAVDISSGIHVI------DTSEGGLQMSLLMEGSDDFEITAICHPSTYLNKIVVGSSTG 168
Query: 191 -FTLFNVRTGKQLYTSDE-FPDEITTAEPAPALDIVAFGTSSGEVILFNLRKGKKIRTIK 248
+ N RTGK ++ F IT E ALD+V G +GEV+LFN++ K I + +
Sbjct: 169 RMKIINFRTGKVIHEFQRSFDSRITIIEQTTALDVVVVGLENGEVMLFNVKMDKIITSFR 228
Query: 249 TPTRISSISFRTDGASHISVASTSGDLIFYDLDH 282
+I++++FR DG S + A +G + +DL++
Sbjct: 229 HDAKITNVAFRDDGESTMVTADKNGTMAVWDLEN 262
>ECU06g0370i [R] KOG1539 WD repeat protein
Length = 749
Score = 102 bits (254), Expect = 3e-21
Identities = 94/403 (23%), Positives = 171/403 (42%), Gaps = 52/403 (12%)
Query: 18 VRKHASRIFSPYRIVGNVSTGVPYAIGTLGTTFYIVTSVGKSFQIFDANNLHLLFVSDKE 77
++ + S +F YR+ +++G+P + T +I ++ S+ ++D +++LF
Sbjct: 15 MKNNESDLFKRYRVANQMASGIPLMVRDANGTVHITSATDTSYIVYDVRKMNVLFCGPMF 74
Query: 78 TEGDITCLAAHFHYVYASFKNKVGIYKRGKLEHLIELPDPNT---------------VVT 122
I C+ VY V + RG + LP V+
Sbjct: 75 NR--IHCVHQRKDAVYVGSYRDVYVTTRGDVVRCFTLPTGPAQSNKRVRVSEETMEGVIR 132
Query: 123 KINVFGEYLIASTDNNVVYIYKKNSPSDKFATELYTNFTIGKLQGGDIVDLVHLPTYVNK 182
+I FGE ++ T N + F TE + I K++ I L H TY+NK
Sbjct: 133 QILGFGETILILTQNEL------------FVTEDLSE--IYKVEHDGIERLFHPHTYINK 178
Query: 183 LLVVTKSN-FTLFNVRTGKQLYTSDEFPDEITTAEPAPALDIVAFGTSSGEVILFNLRKG 241
++ V K LFNV + +++Y F IT E +P +D+V G +G V +FNLR
Sbjct: 179 VVKVLKGGRMVLFNVSSRREIYVYRAFEAMITAIEQSPVVDVVGIGLENGTVHIFNLRTD 238
Query: 242 KKIRTIKTPTRISSISFRTDGASHISVASTSGDLIFYDLDHRSRVQVLKGIHKEVNG--- 298
K + + K R+S +SF G +++ S G IF DLD + ++ ++ NG
Sbjct: 239 KILFSFKVDGRVSELSF---GGNYLMAISRKGMFIF-DLDGKKKIVAVENSAGGPNGREE 294
Query: 299 ----GVARASFLNGQPIVVTCGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSR--GGHS 352
V FL+G+ +VV+ + E QG + +I+ R + G
Sbjct: 295 CPGREVLSGRFLDGKSLVVSTKDSLTVYEI-------QGYTLELIKRRRTYNDKIIGMEF 347
Query: 353 QPPSSIAFADDQSHFILSASKDRSLWGFSLRKDAQSQELSQRL 395
++ ++ F ++ KD + F + D + ++++ +
Sbjct: 348 IDEKNVLLFGPRNVFSMNMYKDEQNFMFKFKGDVEMMDVNKNI 390
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 66.2 bits (160), Expect = 2e-10
Identities = 35/73 (47%), Positives = 44/73 (59%)
Query: 576 TQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIK 635
TQKV GH I S DFS +GR+IVS S D T R WD+ TG CI +++EN +T I
Sbjct: 391 TQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIA 450
Query: 636 FSPNGDLLATTSV 648
SPN +A S+
Sbjct: 451 ISPNDQFIAVGSL 463
Score = 52.4 bits (124), Expect = 3e-06
Identities = 34/153 (22%), Positives = 69/153 (44%), Gaps = 1/153 (0%)
Query: 464 FAKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCG 523
+ +++A S G + + G+ + I + +L + + R V+ H++ + + R +VS
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 524 LDGIVGFYDFSKSTFLGKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQL 583
D +D + KL++++ +T++ + +V +L
Sbjct: 422 GDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERL 480
Query: 584 WGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDL 616
GH + S FSPD ++S SLD TI+ W+L
Sbjct: 481 EGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 64.7 bits (156), Expect = 6e-10
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 42/178 (23%)
Query: 481 SSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLG 540
S + I V + ++GQ + + H AV IA+D +++VSC D + +DF +
Sbjct: 125 SEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ----- 179
Query: 541 KLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGR 600
T ++ L GH + +SS F P G
Sbjct: 180 -----------------------------------TYDCLKSLKGHEHTVSSVTFLPTGD 204
Query: 601 WIVSSSLDSTIRTWDLPTGGCIDGMKVEN-VITNIKFSPNGDLLATTSVSGNGISLWA 657
+++S+S D TI+ WD+ TG C+ + N + I+ S +G L A+ S+ +++W+
Sbjct: 205 FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLD-QTVTVWS 261
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 63.5 bits (153), Expect = 1e-09
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 7/244 (2%)
Query: 457 IPTNDEGFAKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMN 516
IP + + S G + GS++ I + + ++ + H+ + + +
Sbjct: 102 IPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMG-HRLGINEFSWSSDS 160
Query: 517 RKMVSCGLDGIVGFYDFSKSTFLGKLKLDSP-ITSMVYHRXXXXXXXXXXXXXXXXXXXX 575
+ +VSC D +V +D S + LK + + ++
Sbjct: 161 KLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCAR 220
Query: 576 TQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN--VITN 633
+ + GH + +SS F+ DG ++ S S D +R WD TG C+ + E IT+
Sbjct: 221 NGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITH 280
Query: 634 IKFSPNGDLLATTSVSGNGISLWANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLE 693
+KFSPNG + ++++ N + LW Q + V E + N S GG +
Sbjct: 281 VKFSPNGKYILASNLN-NTLKLW--DYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVS 337
Query: 694 GAFD 697
G+ D
Sbjct: 338 GSED 341
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 62.4 bits (150), Expect = 3e-09
Identities = 57/235 (24%), Positives = 99/235 (41%), Gaps = 8/235 (3%)
Query: 467 SVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDG 526
SV S G + S++ I + G+ K HK ++ +A + +VS D
Sbjct: 50 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 527 IVGFYDFSKSTFLGKLKLDSP-ITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWG 585
+ +D S L LK S + ++ T K ++ L
Sbjct: 110 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169
Query: 586 HSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN--VITNIKFSPNGDLL 643
HS+ +S+ F+ DG IVSSS D R WD +G C+ + ++ ++ +KFSPNG +
Sbjct: 170 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 229
Query: 644 ATTSVSGNGISLW-ANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGAFD 697
++ N + LW ++ + + T +E+ + N S GG + G+ D
Sbjct: 230 LAATLD-NTLKLWDYSKGKCLKTYTGHKNEK---YCIFANFSVTGGKWIVSGSED 280
Score = 54.7 bits (130), Expect = 7e-07
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 503 HKKAVTGIAMDGMNRKMVSCGLDGIV---GFYDFSKSTFLGKLKLDSPITSMVYHRXXXX 559
H KAV+ + + S D ++ G YD + KL I+ + +
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSNL 101
Query: 560 XXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTG 619
+ K ++ L GHSN + +F+P IVS S D ++R WD+ TG
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG 161
Query: 620 GCIDGMKV-ENVITNIKFSPNGDLLATTSVSG 650
C+ + + ++ + F+ +G L+ ++S G
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 60.5 bits (145), Expect = 1e-08
Identities = 38/147 (25%), Positives = 64/147 (42%), Gaps = 2/147 (1%)
Query: 503 HKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLD-SPITSMVYHRXXXXXX 561
H AV +A D +++ G++ +D ++ + S +++ +H
Sbjct: 87 HTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLA 146
Query: 562 XXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGC 621
+ ++ GHS IS+ F+PDGRW+VS LD+ ++ WDL G
Sbjct: 147 SGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKL 206
Query: 622 IDGMKV-ENVITNIKFSPNGDLLATTS 647
+ K E I ++ F P LLAT S
Sbjct: 207 LHEFKFHEGPIRSLDFHPLEFLLATGS 233
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 60.1 bits (144), Expect = 2e-08
Identities = 56/235 (23%), Positives = 100/235 (41%), Gaps = 8/235 (3%)
Query: 467 SVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDG 526
+V S G + S++ I + G+ K HK ++ +A +R +VS D
Sbjct: 77 AVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDK 136
Query: 527 IVGFYDFSKSTFLGKLKLDSP-ITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWG 585
+ ++ S L LK S + ++ T K ++ L
Sbjct: 137 TLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 196
Query: 586 HSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN--VITNIKFSPNGDLL 643
HS+ +S+ F+ DG IVSSS D R WD +G C+ + ++ ++ +KFSPNG +
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 256
Query: 644 ATTSVSGNGISLW-ANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGAFD 697
++ N + LW ++ + + T +E+ + N S GG + G+ D
Sbjct: 257 LAATLD-NTLKLWDYSKGKCLKTYTGHKNEK---YCIFANFSVTGGKWIVSGSED 307
Score = 57.8 bits (138), Expect = 8e-08
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 15/204 (7%)
Query: 457 IPTNDEGFAKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRL------HKKAVTGI 510
+PT G S+ + G G SSN S N S + Y L H KAV+ +
Sbjct: 22 LPTAPSG-PNSLQPNSVGQPGATTSSNSSAS--NKSSLSVKPNYTLKFTLAGHTKAVSAV 78
Query: 511 AMDGMNRKMVSCGLDGIV---GFYDFSKSTFLGKLKLDSPITSMVYHRXXXXXXXXXXXX 567
+ S D ++ G YD + KL I+ + +
Sbjct: 79 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG--ISDVAWSSDSRLLVSGSDDK 136
Query: 568 XXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKV 627
T K ++ L GHSN + +F+P IVS S D ++R WD+ TG C+ +
Sbjct: 137 TLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 196
Query: 628 -ENVITNIKFSPNGDLLATTSVSG 650
+ ++ + F+ +G L+ ++S G
Sbjct: 197 HSDPVSAVHFNRDGSLIVSSSYDG 220
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 59.7 bits (143), Expect = 2e-08
Identities = 48/193 (24%), Positives = 85/193 (43%), Gaps = 8/193 (4%)
Query: 464 FAKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRL---HKKAVTGIAMDGMNRKMV 520
+ +SVA S G + G + I + ++ +++VYRL H++ + + + +V
Sbjct: 336 YVRSVAFSPDGKYLATGVEDQQIRIWDIA---QKRVYRLLTGHEQEIYSLDFSKDGKTLV 392
Query: 521 SCGLDGIVGFYDFSKSTFLGKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVV 580
S D V +D L D +T++++ + +V
Sbjct: 393 SGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTS-SGTLV 451
Query: 581 RQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLP-TGGCIDGMKVENVITNIKFSPN 639
QL GH + S FSPDG+++VS SLD+TI+ W+L M E I F+ +
Sbjct: 452 EQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGH 511
Query: 640 GDLLATTSVSGNG 652
D + + +VS +G
Sbjct: 512 KDFILSVTVSPDG 524
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 59.7 bits (143), Expect = 2e-08
Identities = 56/235 (23%), Positives = 98/235 (40%), Gaps = 8/235 (3%)
Query: 467 SVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDG 526
SV S G + S++ I + G+ K H ++ +A + ++VS D
Sbjct: 46 SVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDK 105
Query: 527 IVGFYDFSKSTFLGKLKLDSP-ITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWG 585
+ +D L LK S + ++ T K ++ L
Sbjct: 106 TLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSA 165
Query: 586 HSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN--VITNIKFSPNGDLL 643
HS+ +S+ F+ G IVS S D R WD +G C+ + ++ ++ +KFSPNG +
Sbjct: 166 HSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYI 225
Query: 644 ATTSVSGNGISLW-ANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGAFD 697
T ++ N + LW +R + + T Q +E+ + N S GG + G+ D
Sbjct: 226 LTATLD-NTLKLWDYSRGRCLKTYTGQKNEK---YCIFANFSVTGGKWIVSGSED 276
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 59.7 bits (143), Expect = 2e-08
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Query: 462 EGFAKSVA---ISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRK 518
EG KS++ S CG + S++ + + N+ + HK V IA +R
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRC 143
Query: 519 MVSCGLDGIVGFYDFSKSTFLGKLK-LDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQ 577
+VS D + ++ S LK ++ + ++ T
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG 203
Query: 578 KVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN--VITNIK 635
++ L HS+ +S+ F+ DG I S S D +R WD G CI + + + +K
Sbjct: 204 MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVK 263
Query: 636 FSPNGDLLATTSVSGNGISLW 656
FSPNG + +++ + LW
Sbjct: 264 FSPNGKYILASNLDST-LKLW 283
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 59.7 bits (143), Expect = 2e-08
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 503 HKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLD-SPITSMVYHRXXXXXX 561
H V +A + +++ G++ +D +S + S +++ +H
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA 65
Query: 562 XXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGC 621
+ ++ GH+ IS+ +FSPDGRW+VS LD+ ++ WDL G
Sbjct: 66 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL 125
Query: 622 IDGMKV-ENVITNIKFSPNGDLLATTS 647
+ K E I ++ F P LLAT S
Sbjct: 126 LHEFKCHEGPIRSLDFHPLEFLLATGS 152
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 59.3 bits (142), Expect = 3e-08
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 171 VDLVH-LPTYVNKLLVVTKSNFTLFNVRTGKQLYTSDEFPDEITTAEPAPALDIVAFGTS 229
VD+ H LP + L ++ L+++ GKQ+ + D P + T +P +A GT
Sbjct: 70 VDISHTLPIAASSSL---DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH 126
Query: 230 SGEVILFNLRKGKKIRTIKTPTR-ISSISFRTDGASHISVASTSGDLIFYDLDHRSRVQV 288
G+V +F + GKK ++ T + I SI++ DG +++ + G + +D+ +
Sbjct: 127 VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHT 185
Query: 289 LKGIHKEVNGGVARASFLNGQPIVVTCGGDNQLKEFVFDPSLSQGDSEVVIQPARLLRSR 348
L+G + +F ++VT D +K ++D +Q A L +
Sbjct: 186 LEGHAMPIRS----LTFSPDSQLLVTASDDGYIK--IYD-----------VQHANLAGTL 228
Query: 349 GGHSQPPSSIAFADDQSHFILSAS-KDRSLWGFSLR 383
GH+ ++AF D +HF+ S+S K +W R
Sbjct: 229 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Score = 58.2 bits (139), Expect = 6e-08
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 465 AKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGL 524
A ++A S + G+ G +++ ++SG+K K + IA + + S +
Sbjct: 109 AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 525 DGIVGFYDFSKSTFLGKLKLDS-PITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQL 583
DGI+ +D + L L+ + PI S+ + + L
Sbjct: 169 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 228
Query: 584 WGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDG-MKVENVITNIKFSPNGDL 642
GH++ + + F PD VSSS D +++ WD+ T C+ ++ + +K++ NG
Sbjct: 229 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK 288
Query: 643 LAT 645
+ +
Sbjct: 289 IVS 291
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 59.3 bits (142), Expect = 3e-08
Identities = 40/184 (21%), Positives = 82/184 (43%), Gaps = 3/184 (1%)
Query: 467 SVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHK-KAVTGIAMDGMNRKMVSCGLD 525
+V S C + + G ++G IS++++++G+ + K IA + + S +D
Sbjct: 132 TVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAID 191
Query: 526 GIVGFYDFSKSTFLGKLKLDS-PITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLW 584
GI+ +D + + L+ + P+ S+ + VV L
Sbjct: 192 GIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLS 251
Query: 585 GHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGM-KVENVITNIKFSPNGDLL 643
GH++ + FS DG+ SSS D++++ WD C+ + + + +++SP D +
Sbjct: 252 GHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKV 311
Query: 644 ATTS 647
A+ S
Sbjct: 312 ASAS 315
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 58.2 bits (139), Expect = 6e-08
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 577 QKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKF 636
+K+V L GH I S D+ P G +VS S D T+R WDL TG C + +E+ +T +
Sbjct: 475 RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV 534
Query: 637 SP-NGDLLATTSVSGNGISLWANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGA 695
SP +G +A S+ + +W + F+ ++D E N SG G + +
Sbjct: 535 SPGDGKYIAAGSLD-RAVRVWDSETGFL---VERLDSE--------NESGTGHKDSVYSV 582
Query: 696 FDTEEDDS 703
T + S
Sbjct: 583 VFTRDGQS 590
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 57.4 bits (137), Expect = 1e-07
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 13/172 (7%)
Query: 489 HNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLDSP- 547
H+ Q+G R H A T +N +VSC DG V + S+ + +G+L+
Sbjct: 245 HSSQAG----CARFHPGAFTQNDYSSLN--VVSCSYDGTVLLWSLSQESPIGELEQHPQR 298
Query: 548 ITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSL 607
++ + +H T+K + GHS ++ F PDG ++
Sbjct: 299 VSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGH 358
Query: 608 DSTIRTWDLPTGGCI---DGMKVENVITNIKFSPNGDLLATTSVSGNGISLW 656
D R WD+ TG CI DG E I ++++ PNG + T S S N + +W
Sbjct: 359 DCYGRVWDMRTGRCIMFLDGHTKE--IHSVEWMPNGYEMITGS-SDNSMKVW 407
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 56.6 bits (135), Expect = 2e-07
Identities = 30/72 (41%), Positives = 42/72 (57%), Gaps = 1/72 (1%)
Query: 580 VRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN-VITNIKFSP 638
VR L GH+N +SS DF+P G +VS S D T+R W+L G C+ + + I ++ S
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISA 190
Query: 639 NGDLLATTSVSG 650
+G L AT S G
Sbjct: 191 DGTLCATASYDG 202
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 55.8 bits (133), Expect = 3e-07
Identities = 32/101 (31%), Positives = 56/101 (54%), Gaps = 4/101 (3%)
Query: 576 TQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVEN--VITN 633
T K ++ L HS+ +++ DF+ DG IVSSS D R WD TG C+ + + ++
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSF 203
Query: 634 IKFSPNGDLLATTSVSGNGISLW-ANRAQFISVSTRQIDEE 673
++FSPNG + ++ N + LW + A+F+ T ++ +
Sbjct: 204 VRFSPNGKFILVGTLD-NTLRLWNISSAKFLKTYTGHVNAQ 243
Score = 54.7 bits (130), Expect = 7e-07
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 13/158 (8%)
Query: 503 HKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSK---------STFLGKLKLDSPITSMVY 553
H +AV+ + R + S D + Y + F G ++ I+ + +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGH---ENGISDVAF 79
Query: 554 HRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRT 613
T +++ L GH+N +F+P IVS S D T+R
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 614 WDLPTGGCIDGMKV-ENVITNIKFSPNGDLLATTSVSG 650
WD+ TG C+ + + +T + F+ +G L+ ++S G
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG 177
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 55.8 bits (133), Expect = 3e-07
Identities = 68/341 (19%), Positives = 128/341 (36%), Gaps = 39/341 (11%)
Query: 430 ENILTVHKGEKFARTWNSRTKRVGRWTIPTNDEGFAKSVAISQCGNFGLVGSSNGGISVH 489
+N L + + WN T R T D G+ I +G+VG+ +G + +
Sbjct: 417 DNTLLMSTSHSEVKIWNPSTGSCLR----TIDSGYGLCSLIVPQNKYGIVGTKSGVLEII 472
Query: 490 NLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLG-----KLKL 544
++ S K + + H + I + V+ D V F+++ + L +K+
Sbjct: 473 DIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQATKKLTVSNVKSMKM 532
Query: 545 DSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVS 604
+ + ++ + K L+GH + D S DG IV+
Sbjct: 533 NDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVT 592
Query: 605 SSLDSTIRTWDLPTGGC----------IDGMK-VENVITNIKFSPNGDLLA--------- 644
S D ++ W L G C + G+K V N T+ FS D L
Sbjct: 593 GSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRN--THYLFSIGKDRLVKYWDADKFE 650
Query: 645 -TTSVSGNGISLW----ANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEGAFDTE 699
++ G+ +W +NR F+ + + P + LE F++E
Sbjct: 651 HLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKEKRLEELFESE 710
Query: 700 EDDSEDLFGKYDSMEQIDKDLLTLSLGPRNKMNILLNLDII 740
D++ D ++ ME+I ++ + +L + +++L D I
Sbjct: 711 IDNAAD--DRHGPMEEIPEEGVA-ALAGKKTIDVLSAADSI 748
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 55.1 bits (131), Expect = 5e-07
Identities = 42/162 (25%), Positives = 65/162 (39%), Gaps = 9/162 (5%)
Query: 500 YRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKS----TFLGKLKLDSPITSMVYHR 555
YR H V + VSC D + + F+G L S + + +H
Sbjct: 488 YRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHL---SDVDCVQFHP 544
Query: 556 XXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWD 615
T + VR + GH +SS FS GR++ S S+D I WD
Sbjct: 545 NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWD 604
Query: 616 LPTGGCIDG-MKVENVITNIKFSPNGDLLATTSVSGNGISLW 656
L G + ++ + +T I FS +G +LA + N ++LW
Sbjct: 605 LSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLD-NNLTLW 645
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 55.1 bits (131), Expect = 5e-07
Identities = 28/83 (33%), Positives = 49/83 (58%), Gaps = 3/83 (3%)
Query: 576 TQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPT-GGCIDGMKVE-NVITN 633
+QK+ L GH + + DF+P G ++VS S D+T+R WD+ CI + + + +
Sbjct: 91 SQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNS 150
Query: 634 IKFSPNGDLLATTSVSGNGISLW 656
+KFSP+G +A+ + G+ I +W
Sbjct: 151 VKFSPDGLWIASAGLEGS-ILIW 172
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 54.7 bits (130), Expect = 7e-07
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 23/215 (10%)
Query: 443 RTWNSRTKRVGRWTIPTNDEGFAKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYR- 501
+ WN +T + I T + G+A + G ++G+ NG + + +L S
Sbjct: 415 KIWNIKTHKC----IRTFECGYALTCKFLPGGLLVILGTRNGELQLFDLASSSLLDTIED 470
Query: 502 LHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDF---------SKSTFLGKLKLDSPITSMV 552
H A+ + + +++V+ D V F+DF +K+ FL LKL T +
Sbjct: 471 AHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLEL 530
Query: 553 YHRXXXXXXXXXXXXXXXXXXXXTQKVV--------RQLWGHSNRISSFDFSPDGRWIVS 604
T KV L+GH + S D S D + I++
Sbjct: 531 TDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIIT 590
Query: 605 SSLDSTIRTWDLPTGGCIDGMKV-ENVITNIKFSP 638
SS D I+ W L G C + ++ I N+KF P
Sbjct: 591 SSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLP 625
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 54.3 bits (129), Expect = 9e-07
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 7/210 (3%)
Query: 453 GRWTIPTNDEGFAKSVAI---SQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTG 509
G +++ G KSV++ S CG + GS++ I V N + H+ +
Sbjct: 201 GEFSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGIND 260
Query: 510 IAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLDSP-ITSMVYHRXXXXXXXXXXXXX 568
+ ++ + S D V +D L ++ + + ++
Sbjct: 261 FSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDET 320
Query: 569 XXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVE 628
T V+ + HS+ I+S ++ DG + +SS D IR WD +G C+ +
Sbjct: 321 VRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDT 380
Query: 629 N--VITNIKFSPNGDLLATTSVSGNGISLW 656
+ +T + FSPNG L + + + + LW
Sbjct: 381 DHAPVTFVCFSPNGKYLLSAQLD-SSLKLW 409
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 53.5 bits (127), Expect = 1e-06
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 3/156 (1%)
Query: 503 HKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLK-LDSPITSMVYHRXXXXXX 561
H V + ++ +V+ G + +D + L L L + I S+ +H
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHPYGEFVA 121
Query: 562 XXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGC 621
+ V + GHS + FSPDG+W+ S++ D T++ WDL G
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 622 IDGMKVENVITN-IKFSPNGDLLATTSVSGNGISLW 656
+ N ++F PN LLA+ S G I W
Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDGT-IRFW 216
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 53.5 bits (127), Expect = 1e-06
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 7/161 (4%)
Query: 463 GFAKSVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSC 522
G+ + +A+ + G+ + I + +L SG+ + H V G+A+ + + SC
Sbjct: 173 GWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSC 232
Query: 523 GLDGIVGFYDFSKSTFL----GKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQK 578
G D V +D + + G L S + S+ H T+
Sbjct: 233 GEDRQVKCWDLEYNKVIRHYHGHL---SAVYSLALHPTIDVLATSGRDSTARIWDMRTKA 289
Query: 579 VVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTG 619
V L GH+N ++S I++ S DST+R WDL G
Sbjct: 290 NVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAG 330
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 53.1 bits (126), Expect = 2e-06
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 580 VRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENV-ITNIKFSP 638
++ L GH+N + +F+P IVS S D TIR W++ TG C+ +K ++ I+++ F+
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 639 NGDLLATTSVSGN 651
+G L+ + S G+
Sbjct: 181 DGSLIVSASHDGS 193
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 52.8 bits (125), Expect = 3e-06
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 11/200 (5%)
Query: 467 SVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAM------DGMNR-KM 519
S A S+ + L S +G + ++ + ++ R H V G+A+ D N M
Sbjct: 266 SAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAM 325
Query: 520 VSCGLDGIVGFYDFSKSTFLGKLKLDSP--ITSMVYHRXXXXXXXXXXXXXXXXXXXXTQ 577
S G DG V + F+ + + P ++ + +H +
Sbjct: 326 ASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQK 385
Query: 578 KVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVE-NVITNIKF 636
V GH+ + + DG +V+ LD+ R WDL TG CI ++ + + F
Sbjct: 386 TEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDF 445
Query: 637 SPNGDLLATTSVSGNGISLW 656
SPNG +AT S N +W
Sbjct: 446 SPNGFHIATGS-QDNTCKIW 464
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 52.4 bits (124), Expect = 3e-06
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 585 GHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKV-ENVITNIKFSPNGDLL 643
GH+ ++ F+PDGRWIVS D+ ++ WDL G + K E I ++ F P+ LL
Sbjct: 234 GHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLL 293
Query: 644 ATTS 647
AT S
Sbjct: 294 ATGS 297
>At3g42660 [R] KOG1274 WD40 repeat protein
Length = 951
Score = 52.4 bits (124), Expect = 3e-06
Identities = 44/181 (24%), Positives = 69/181 (37%), Gaps = 11/181 (6%)
Query: 475 NFGLVGSSNGGISVHN--LQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYD 532
+F SS+ ISVH+ S + R H+ VT +A+ + + S +D V Y
Sbjct: 31 HFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYK 90
Query: 533 FSKSTFLGKL-KLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRIS 591
F F + + PI + ++ +VR L GH ++
Sbjct: 91 FPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVT 150
Query: 592 SFDFSPDGRWIVSSSLDSTIRTWDLPTG-------GCIDGMKVENVITNI-KFSPNGDLL 643
DF P+G + S T+ W+L G G I NI ++SP+G L
Sbjct: 151 GLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTL 210
Query: 644 A 644
A
Sbjct: 211 A 211
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 52.4 bits (124), Expect = 3e-06
Identities = 44/197 (22%), Positives = 74/197 (37%), Gaps = 13/197 (6%)
Query: 443 RTWNSRTKRVGRWTIPTNDEGFAKSVAISQCGNFGLVGSS-NGGISVHNLQSGQKRKVYR 501
R WN+RT ++ + + C L+ +S + + V N Q G R
Sbjct: 53 RVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLR 112
Query: 502 LHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLDSPITSMVYHRXXXXXX 561
H+ V +A ++ S GLD + +D + T L ++ TS +
Sbjct: 113 THRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASN-NTVTTSSLTGSKDSIYS 171
Query: 562 XXXXXXXXXXXXXXTQKVVR-----------QLWGHSNRISSFDFSPDGRWIVSSSLDST 610
T+ ++R +L GH+ + SPDG +VS S D T
Sbjct: 172 LAMNPSGTVIVSGSTENILRIWDPRTCMRRMKLRGHTENVRCLVVSPDGNQVVSGSSDGT 231
Query: 611 IRTWDLPTGGCIDGMKV 627
I+ W+L C+ + V
Sbjct: 232 IKVWNLGQQRCVQTIHV 248
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 52.4 bits (124), Expect = 3e-06
Identities = 29/83 (34%), Positives = 49/83 (58%), Gaps = 3/83 (3%)
Query: 576 TQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGM-KVENV-ITN 633
T K ++ + H + I+S DF DG V+SS D +R WD TG + + V+N+ +
Sbjct: 170 TGKTLKIVHAHQDPITSVDFHRDGNIFVTSSYDGLVRLWDSSTGHVLKTLVDVDNIPVGY 229
Query: 634 IKFSPNGDLLATTSVSGNGISLW 656
+KFSPNG + +++++ N + LW
Sbjct: 230 VKFSPNGRYILSSTLN-NTLRLW 251
Score = 51.6 bits (122), Expect = 6e-06
Identities = 37/155 (23%), Positives = 64/155 (40%), Gaps = 2/155 (1%)
Query: 503 HKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLDSPITSMVYHRXXXXXXX 562
H VTG+ +VS D ++ +D S + + L + V
Sbjct: 55 HSGCVTGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSAAGLIAS 114
Query: 563 XXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCI 622
++ V+ L GHS S F+P + S+S D T+R WD+ TG +
Sbjct: 115 CSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKTL 174
Query: 623 DGMKV-ENVITNIKFSPNGDLLATTSVSGNGISLW 656
+ ++ IT++ F +G++ T+S G + LW
Sbjct: 175 KIVHAHQDPITSVDFHRDGNIFVTSSYDGL-VRLW 208
>7300458 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 486
Score = 52.4 bits (124), Expect = 3e-06
Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 32/231 (13%)
Query: 474 GNFGLVGSSNGGISVHNLQSGQKRK--------VYRLHKKAVTGIAMDGMNRKMVSCGLD 525
G + + GS +G + V N +G+ RK + + ++AV + + + S D
Sbjct: 203 GQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQD 262
Query: 526 GIVGFYDFSKSTFLGKLKL--DSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQL 583
G + + L K + IT + + R + K++++
Sbjct: 263 GQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEF 322
Query: 584 WGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLL 643
GHS+ ++ F+PDG ++S+S D T++ W L T C+ + P G+ L
Sbjct: 323 KGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECV-----------ATYKPLGNEL 371
Query: 644 ATTSVSGNGISLWANRAQFISVSTRQIDEEEFATVMLPNVSGDGGSNFLEG 694
A +V + L N FI + TV++ N+ G +F G
Sbjct: 372 AVNTV----LILPKNPEHFIVCNRSN-------TVVIMNMQGQIVRSFSSG 411
>CE11192 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 925
Score = 52.0 bits (123), Expect = 4e-06
Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 6/180 (3%)
Query: 474 GNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDF 533
G+ G+ +G + + N +S + H VT + R ++S LDG V +D
Sbjct: 372 GSLMATGAEDGKVKIWNSRSSFCTVTFDEHTSGVTAVKWTQSGRAILSASLDGTVRAHDL 431
Query: 534 SKSTFLGKLKLDSPI---TSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRI 590
+ L P T V T ++ L GH + I
Sbjct: 432 KRYRNFRTLVCPEPTQLATLAVDKAGDLVIAGAKEVFNIYIWSFETGHLLDILSGHESAI 491
Query: 591 SSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLATTSVSG 650
SS D G IVS S D TI+ W + + ++V + ++KFSP GD +A + G
Sbjct: 492 SSIDIH--GNHIVSGSWDRTIKMWTIVDSQA-ETVEVSHEALDVKFSPAGDEIAVLTSDG 548
>7301430 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 719
Score = 52.0 bits (123), Expect = 4e-06
Identities = 25/66 (37%), Positives = 38/66 (56%)
Query: 579 VVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSP 638
+VRQ GH++ S D SPDG + + LD+T+R+WDL G + + I ++ + P
Sbjct: 557 LVRQFQGHTDGASCIDISPDGSRLWTGGLDNTVRSWDLREGRQLQQHDFSSQIFSLGYCP 616
Query: 639 NGDLLA 644
GD LA
Sbjct: 617 TGDWLA 622
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 585 GHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKV-ENVITNIKFSPNGDLL 643
GH+ ++ F+PDGRW+VS D+ ++ WDL G + K E I ++ F P+ LL
Sbjct: 141 GHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLL 200
Query: 644 ATTS 647
AT S
Sbjct: 201 ATGS 204
Score = 51.2 bits (121), Expect = 7e-06
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 516 NRKMVSCGLDGIVGFYDFSK-STFLGKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXX 574
+R +V+ G D V + K + L S I S+ +
Sbjct: 29 SRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDL 88
Query: 575 XTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNI 634
K+VR L GH + S DF P G + S SLD+ ++ WD+ GCI K N+
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV 148
Query: 635 -KFSPNG 640
+F+P+G
Sbjct: 149 LRFTPDG 155
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 51.6 bits (122), Expect = 6e-06
Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 3/187 (1%)
Query: 481 SSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLG 540
S + I++ +L SG+ R H+ V+GI + G ++S GLD + +D T L
Sbjct: 533 SEDASIAITDLASGKLRHRITHHRGPVSGIVVAGACDVLISGGLDRTICVWDLDNFTLLN 592
Query: 541 KLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFSPDGR 600
+++ S + + T K + L GH ++I S D +
Sbjct: 593 TMQMTSAVLRIDISWNSVFLLALCEDNALYVRTLATGKELHTLKGHKSKIRSISIGKDSQ 652
Query: 601 WIVSSSLDSTIRTWDLPTGGCIDGMKVE-NVITNIKFSPNGDLLATTSVSGNGISLWANR 659
V D+ +D+ G + + +T + N D L T V GN I+ ++ R
Sbjct: 653 RCVVGCDDTRALIYDMHAGKLVRSLPPNPGPVTAVHAMDNDDFLVT--VGGNKITFYSFR 710
Query: 660 AQFISVS 666
+ + V+
Sbjct: 711 NEELYVN 717
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 51.2 bits (121), Expect = 7e-06
Identities = 53/235 (22%), Positives = 95/235 (39%), Gaps = 16/235 (6%)
Query: 424 NRQGQWENILTVHKGEKFARTWNSRT---KRVGRWTIPTNDEGFAKSVAISQCGNFGLVG 480
N+ G+W + G+ W S + K+ G + TN S+A S G+ +
Sbjct: 311 NQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFD-STN------SLAYSPDGSRVVTA 363
Query: 481 SSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSK----S 536
S +G I V ++ SG + H +VT + + M S LDG V +D +
Sbjct: 364 SEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFR 423
Query: 537 TFLGKLKLDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWGHSNRISSFDFS 596
TF G ++ + V T +++ L GH +S FS
Sbjct: 424 TFTGTERIQFNCLA-VDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFS 482
Query: 597 PDGRWIVSSSLDSTIRTWDL-PTGGCIDGMKVENVITNIKFSPNGDLLATTSVSG 650
+ + S+S D TIR W + ++ ++V + + + P+G +A +++ G
Sbjct: 483 QENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMRPDGKEVAVSTLKG 537
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 51.2 bits (121), Expect = 7e-06
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 580 VRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVE-NVITNIKFSP 638
VR GH + S FSP+G+++ S+ D ++ WDL +G ++ + IT++ FSP
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 520
Query: 639 NGDLLATTSVSGNGISLWANRAQFIS 664
+ L+A+ S+ N + +W R + S
Sbjct: 521 DSGLIASASMD-NSVRVWDIRNTYCS 545
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 51.2 bits (121), Expect = 7e-06
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 576 TQKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENV-ITNI 634
T ++ L+GHS + FSPD +++SSS D T+R W L T C+ G K N + +
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 591
Query: 635 KFSPNG 640
+FSP G
Sbjct: 592 QFSPYG 597
>7302708 [J] KOG0650 WD40 repeat nucleolar protein Bop1 involved in ribosome
biogenesis
Length = 784
Score = 51.2 bits (121), Expect = 7e-06
Identities = 22/71 (30%), Positives = 39/71 (53%)
Query: 585 GHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKFSPNGDLLA 644
GH++ + S P G ++VS S D T++ W++ TG CI ++ + V+ + + PN L
Sbjct: 445 GHTDLVRSVSVEPKGEYLVSGSDDKTVKIWEIATGRCIRTIETDEVVRCVAWCPNPKLSI 504
Query: 645 TTSVSGNGISL 655
+GN + L
Sbjct: 505 IAVATGNRLLL 515
>HsM4827028 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 50.8 bits (120), Expect = 1e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 577 QKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKF 636
Q +VRQ GH++ S D S DG + + LD+T+R+WDL G + + I ++ +
Sbjct: 606 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY 665
Query: 637 SPNGDLLATTSVSGNGISLWANR 659
P G+ LA S N L N+
Sbjct: 666 CPTGEWLAVGMESSNVEVLHVNK 688
>Hs21541824 [B] KOG0639 Transducin-like enhancer of split protein (contains
WD40 repeats)
Length = 770
Score = 50.8 bits (120), Expect = 1e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 577 QKVVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVENVITNIKF 636
Q +VRQ GH++ S D S DG + + LD+T+R+WDL G + + I ++ +
Sbjct: 606 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY 665
Query: 637 SPNGDLLATTSVSGNGISLWANR 659
P G+ LA S N L N+
Sbjct: 666 CPTGEWLAVGMESSNVEVLHVNK 688
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 50.8 bits (120), Expect = 1e-05
Identities = 36/181 (19%), Positives = 75/181 (40%), Gaps = 2/181 (1%)
Query: 467 SVAISQCGNFGLVGSSNGGISVHNLQSGQKRKVYRLHKKAVTGIAMDGMNRKMVSCGLDG 526
S++ + G+ + GS + + V + +G+K + H ++ + + +++ +D
Sbjct: 141 SLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDK 200
Query: 527 IVGFYDFSKSTFLGKLK-LDSPITSMVYHRXXXXXXXXXXXXXXXXXXXXTQKVVRQLWG 585
+D + + L D I + T+K + +L G
Sbjct: 201 TCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEG 260
Query: 586 HSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGGCIDGMKVE-NVITNIKFSPNGDLLA 644
H IS F+P G +++ S D T R WD TG C+ ++ + I + F+ G+++
Sbjct: 261 HEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVI 320
Query: 645 T 645
T
Sbjct: 321 T 321
>At4g29830 [R] KOG4155 FOG: WD40 repeat
Length = 321
Score = 50.8 bits (120), Expect = 1e-05
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 504 KKAVTGIAMDGMNRKMVSCG-LDGIVGFYDFSKSTFLGKLK-LDSPITSMVYHRXXXXXX 561
KK V +A N K ++CG +DG + +D +S L +L+ + P+ S+V+
Sbjct: 158 KKFVLSVAWSP-NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVL 216
Query: 562 XXXXXXXXXXXXXXTQK-VVRQLWGHSNRISSFDFSPDGRWIVSSSLDSTIRTWDLPTGG 620
K ++ + GH++ + S D SPDG I + S D T+R WDL
Sbjct: 217 FSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRA 276
Query: 621 CIDGMKVEN-VITNIKFSPNG 640
I M N + ++ F P G
Sbjct: 277 AIQTMSNHNDQVWSVAFRPPG 297
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,525,453
Number of Sequences: 60738
Number of extensions: 2450620
Number of successful extensions: 9259
Number of sequences better than 1.0e-05: 49
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 8928
Number of HSP's gapped (non-prelim): 225
length of query: 942
length of database: 30,389,216
effective HSP length: 116
effective length of query: 826
effective length of database: 23,343,608
effective search space: 19281820208
effective search space used: 19281820208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)