ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0749 good J KOG0893 Translation, ribosomal structure and biogenesis 60S ribosomal protein L31
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0749 Similar to YDL075w SP|P04649 RPL43A 60S large
subunit ribosomal protein L31.e {P2.231.f2.1} [INTRON]
(95 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL075w [J] KOG0893 60S ribosomal protein L31 147 2e-36
YLR406c [J] KOG0893 60S ribosomal protein L31 146 5e-36
Hs4506633 [J] KOG0893 60S ribosomal protein L31 97 5e-21
7303874 [J] KOG0893 60S ribosomal protein L31 93 5e-20
SPAC890.08 [J] KOG0893 60S ribosomal protein L31 89 1e-18
At4g26230 [J] KOG0893 60S ribosomal protein L31 88 2e-18
At5g56710 [J] KOG0893 60S ribosomal protein L31 87 5e-18
Hs17441891 [J] KOG0893 60S ribosomal protein L31 86 1e-17
At2g19740 [J] KOG0893 60S ribosomal protein L31 86 1e-17
CE20168 [J] KOG0893 60S ribosomal protein L31 85 2e-17
Hs22058348 [J] KOG0893 60S ribosomal protein L31 80 5e-16
Hs20478217 [J] KOG0893 60S ribosomal protein L31 78 2e-15
Hs22061004 [J] KOG0893 60S ribosomal protein L31 72 1e-13
Hs17446129 [J] KOG0893 60S ribosomal protein L31 72 1e-13
Hs22066240 [J] KOG0893 60S ribosomal protein L31 70 4e-13
Hs22046579 [J] KOG0893 60S ribosomal protein L31 67 5e-12
Hs17446295 [J] KOG0893 60S ribosomal protein L31 61 3e-10
Hs18557360 [J] KOG0893 60S ribosomal protein L31 57 6e-09
Hs22057720 [J] KOG0893 60S ribosomal protein L31 56 7e-09
CE20169 [J] KOG0893 60S ribosomal protein L31 55 2e-08
Hs17454435 [J] KOG0893 60S ribosomal protein L31 53 6e-08
Hs20540529 [J] KOG0893 60S ribosomal protein L31 51 3e-07
Hs17443459 [J] KOG0893 60S ribosomal protein L31 50 4e-07
Hs17442418 [J] KOG0893 60S ribosomal protein L31 50 4e-07
Hs22045530 [J] KOG0893 60S ribosomal protein L31 48 3e-06
Hs20552634 [J] KOG0893 60S ribosomal protein L31 48 3e-06
Hs22044851 [J] KOG0893 60S ribosomal protein L31 39 0.001
Hs18550807 [J] KOG0893 60S ribosomal protein L31 37 0.004
Hs22067774 [J] KOG0893 60S ribosomal protein L31 36 0.010
Hs22047114 [J] KOG0893 60S ribosomal protein L31 34 0.039
Hs17475770 [J] KOG0893 60S ribosomal protein L31 28 2.8
7292540 [Z] KOG3595 Dyneins heavy chain 27 4.8
Hs22061009_1 [J] KOG0893 60S ribosomal protein L31 26 8.2
>YDL075w [J] KOG0893 60S ribosomal protein L31
Length = 113
Score = 147 bits (372), Expect = 2e-36
Identities = 72/93 (77%), Positives = 79/93 (84%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGVSFKKRAP+AVKEIKKFAKLHMGTDDVRL P+LNQ IWKRG+KGV +
Sbjct: 20 LHGVSFKKRAPRAVKEIKKFAKLHMGTDDVRLAPELNQAIWKRGVKGVEYRLRLRISRKR 79
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDED 93
NEEEDAKNPLFSYVEPV+VASAKGL TVVV+ED
Sbjct: 80 NEEEDAKNPLFSYVEPVLVASAKGLQTVVVEED 112
>YLR406c [J] KOG0893 60S ribosomal protein L31
Length = 113
Score = 146 bits (368), Expect = 5e-36
Identities = 71/93 (76%), Positives = 79/93 (84%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGVSFKKRAP+AVKEIKKFAKLHMGT+DVRL P+LNQ IWKRG+KGV +
Sbjct: 20 LHGVSFKKRAPRAVKEIKKFAKLHMGTEDVRLAPELNQAIWKRGVKGVEYRLRLRISRKR 79
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDED 93
NEEEDAKNPLFSYVEPV+VASAKGL TVVV+ED
Sbjct: 80 NEEEDAKNPLFSYVEPVLVASAKGLQTVVVEED 112
>Hs4506633 [J] KOG0893 60S ribosomal protein L31
Length = 125
Score = 96.7 bits (239), Expect = 5e-21
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGV FKKRAP+A+KEI+KFA MGT DVR+D +LN+ +W +GI+ VP+
Sbjct: 33 IHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKR 92
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDED 93
NE+ED+ N L++ V V V + K L TV VDE+
Sbjct: 93 NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDEN 125
>7303874 [J] KOG0893 60S ribosomal protein L31
Length = 124
Score = 93.2 bits (230), Expect = 5e-20
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H + FKKRAP+A+KEI+KFA+ MGT DVR+D +LN+ IW +GI+ PF
Sbjct: 30 VHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRSTPFRIRVRLARRR 89
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDEDE 94
N++ED+ N L++YV V V++ K L T V+ +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSD 123
>SPAC890.08 [J] KOG0893 60S ribosomal protein L31
Length = 113
Score = 88.6 bits (218), Expect = 1e-18
Identities = 45/92 (48%), Positives = 64/92 (68%), Gaps = 3/92 (3%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
++GVSFKKRAP+A+KEI FA+ HM T +VR+DP LN+E+WKRGI+ VP
Sbjct: 25 LYGVSFKKRAPRAIKEIVAFAQKHMQTKEVRVDPSLNKEVWKRGIRNVPHRLRLRLSRKR 84
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDE 92
++E+D L++YV+ V VA+ K + T VV+E
Sbjct: 85 SDEDD--KALYTYVQAVDVANPK-METTVVEE 113
>At4g26230 [J] KOG0893 60S ribosomal protein L31
Length = 119
Score = 87.8 bits (216), Expect = 2e-18
Identities = 42/96 (43%), Positives = 61/96 (62%), Gaps = 2/96 (2%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H +FKK+APKA+KEI+KFA+ MGT DVR+D KLN++IW +GI+G P
Sbjct: 24 LHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKR 83
Query: 61 NEEEDAKNPLFSY--VEPVVVASAKGLHTVVVDEDE 94
N++EDAK FS V + GL T +++E++
Sbjct: 84 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119
>At5g56710 [J] KOG0893 60S ribosomal protein L31
Length = 119
Score = 86.7 bits (213), Expect = 5e-18
Identities = 43/96 (44%), Positives = 61/96 (62%), Gaps = 2/96 (2%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H +FKK+APKA+KEI+KFA+ MGT DVR+D KLN++IW +GI+G P
Sbjct: 24 LHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKR 83
Query: 61 NEEEDAKNPLFSY--VEPVVVASAKGLHTVVVDEDE 94
N++EDAK FS V + GL T V++E++
Sbjct: 84 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119
>Hs17441891 [J] KOG0893 60S ribosomal protein L31
Length = 114
Score = 85.5 bits (210), Expect = 1e-17
Identities = 41/93 (44%), Positives = 60/93 (64%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGV FKKRAP+A+KEI+KF+ MGT D+ +D +LN+ +W +GI+ VP+
Sbjct: 22 IHGVGFKKRAPQALKEIRKFSMKEMGTPDMCIDTRLNKAVWAKGIRDVPYCIHVCLSRKC 81
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDED 93
NE++D+ N L+ V V + K L TV VDE+
Sbjct: 82 NEDKDSPNKLYPLATYVPVTTFKSLQTVDVDEN 114
>At2g19740 [J] KOG0893 60S ribosomal protein L31
Length = 119
Score = 85.5 bits (210), Expect = 1e-17
Identities = 43/96 (44%), Positives = 59/96 (60%), Gaps = 2/96 (2%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H +FKK+AP A+KEI+KFA MGT DVR+D KLN++IW +GI+G P
Sbjct: 24 LHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKR 83
Query: 61 NEEEDAKNPLFSY--VEPVVVASAKGLHTVVVDEDE 94
N++EDAK FS V + GL T V++E+E
Sbjct: 84 NDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119
>CE20168 [J] KOG0893 60S ribosomal protein L31
Length = 122
Score = 84.7 bits (208), Expect = 2e-17
Identities = 42/94 (44%), Positives = 58/94 (61%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+ G+ KKRAP+A+ EIKKFAK+ M T+DVR+D KLN+ IW +GIK VP+
Sbjct: 29 IRGIGSKKRAPRAIDEIKKFAKIQMKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRR 88
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDEDE 94
NE+ED+ L++ V + GL V VD +E
Sbjct: 89 NEDEDSAQKLYTLCTYVPCTNFHGLTNVNVDSEE 122
>Hs22058348 [J] KOG0893 60S ribosomal protein L31
Length = 164
Score = 80.1 bits (196), Expect = 5e-16
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H V FKKRAP+A+KEI+KFA MGT DVR+D + N+ +W +GI+ VP+
Sbjct: 33 IHAVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRFNKAVWAKGIRNVPYPTHVRLSRKC 92
Query: 61 NEEEDAKNPLFSYVEP 76
NE+ED+ N L++ P
Sbjct: 93 NEDEDSPNKLYTLGSP 108
>Hs20478217 [J] KOG0893 60S ribosomal protein L31
Length = 125
Score = 77.8 bits (190), Expect = 2e-15
Identities = 39/88 (44%), Positives = 53/88 (59%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGV FKKR+P A KEI KFA MGT DVR+D +LN+ +W +GI+ V
Sbjct: 32 IHGVGFKKRSPWACKEIWKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVQDLIRMRLSRKH 91
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTV 88
NE+ED+ N L++ V V V + K L +
Sbjct: 92 NEDEDSPNKLYTLVTNVPVTAFKNLQAM 119
>Hs22061004 [J] KOG0893 60S ribosomal protein L31
Length = 142
Score = 72.4 bits (176), Expect = 1e-13
Identities = 37/93 (39%), Positives = 57/93 (60%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGV FKKRAP+A++EI KFA + T VR+D + N+ + +GI+ VP+
Sbjct: 50 IHGVRFKKRAPRALREIPKFAIKEVETLSVRIDSRFNKALCAKGIRNVPYRIRVQLSRKR 109
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGLHTVVVDED 93
NE+ED+ N ++ V V V++ K + TV V E+
Sbjct: 110 NEDEDSPNKRYTLVTYVPVSTFKNVQTVHVHEN 142
>Hs17446129 [J] KOG0893 60S ribosomal protein L31
Length = 105
Score = 72.0 bits (175), Expect = 1e-13
Identities = 34/83 (40%), Positives = 49/83 (58%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGV FKKRAP+A+KE++K A MGT D D +LN+ +W +GI V +
Sbjct: 14 IHGVGFKKRAPQALKELRKLALKEMGTPDAHFDTRLNKAVWAKGISNVSYCIHVRLSRKC 73
Query: 61 NEEEDAKNPLFSYVEPVVVASAK 83
NE++D N L++ V V V + K
Sbjct: 74 NEDKDLPNKLYTLVAYVPVTTLK 96
>Hs22066240 [J] KOG0893 60S ribosomal protein L31
Length = 124
Score = 70.5 bits (171), Expect = 4e-13
Identities = 33/83 (39%), Positives = 49/83 (58%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+HGV FKKR+P+A+KE++K A MGT D D +LN+ +W +GI V +
Sbjct: 33 IHGVGFKKRSPQALKELRKLALKEMGTPDAHFDTRLNKAVWAKGISNVSYCIHVRLSRKC 92
Query: 61 NEEEDAKNPLFSYVEPVVVASAK 83
NE++D N L++ V V V + K
Sbjct: 93 NEDKDLPNKLYTSVAYVPVTTLK 115
>Hs22046579 [J] KOG0893 60S ribosomal protein L31
Length = 110
Score = 66.6 bits (161), Expect = 5e-12
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H V FKKRAP+A+KEI+K+A MGT D+ +D +LN+ +W +GI
Sbjct: 33 IHEVGFKKRAPRALKEIQKYAMKEMGTLDMHIDTRLNKAVWAKGI----------SHTMS 82
Query: 61 NEEEDAKNPLFSYVEPVVVASAKGL 85
NE ED+ N L++ V V V + K L
Sbjct: 83 NEAEDSPNKLYTLVTYVPVTTFKNL 107
>Hs17446295 [J] KOG0893 60S ribosomal protein L31
Length = 138
Score = 60.8 bits (146), Expect = 3e-10
Identities = 25/46 (54%), Positives = 36/46 (77%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIK 46
+HGV FKK AP+A+KE++KFA MGT D R+D +LN+ +W +GI+
Sbjct: 62 IHGVGFKKCAPRALKELRKFAMKEMGTPDARIDIRLNKAVWAKGIR 107
>Hs18557360 [J] KOG0893 60S ribosomal protein L31
Length = 105
Score = 56.6 bits (135), Expect = 6e-09
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H V FKK P A++EI+KFA MGT DV ++ + N+ +W +GI+ VP+
Sbjct: 21 IHRVGFKKCVPGALREIRKFAMKEMGTPDVCVNTRFNKAVWAKGIRNVPYRICVQLFRKC 80
Query: 61 NEE 63
NEE
Sbjct: 81 NEE 83
>Hs22057720 [J] KOG0893 60S ribosomal protein L31
Length = 100
Score = 56.2 bits (134), Expect = 7e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPF 50
+HGV FKK AP+A+ EI KFA MGT DV D +LN+ + +G++ VP+
Sbjct: 32 IHGVGFKKSAPRALSEIWKFAIKDMGTTDVHTDTRLNKAVLTKGLRNVPY 81
>CE20169 [J] KOG0893 60S ribosomal protein L31
Length = 70
Score = 54.7 bits (130), Expect = 2e-08
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 25 MGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXXNEEEDAKNPLFSYVEPVVVASAKG 84
M T+DVR+D KLN+ IW +GIK VP+ NE+ED+ L++ V + G
Sbjct: 1 MKTNDVRVDTKLNKFIWSKGIKNVPYRVRVRLSRRRNEDEDSAQKLYTLCTYVPCTNFHG 60
Query: 85 LHTVVVDEDE 94
L V VD +E
Sbjct: 61 LTNVNVDSEE 70
>Hs17454435 [J] KOG0893 60S ribosomal protein L31
Length = 206
Score = 53.1 bits (126), Expect = 6e-08
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXX 60
+H V FKK AP+A+KEI+KFA MGT V +D +LN+ +W + I+ V
Sbjct: 142 IHEVGFKKCAPRALKEIQKFAMKEMGTPVVLIDTRLNKAVWAKRIRNVTNRIHLCLSRKC 201
Query: 61 NEEED 65
NE+++
Sbjct: 202 NEDKE 206
>Hs20540529 [J] KOG0893 60S ribosomal protein L31
Length = 201
Score = 50.8 bits (120), Expect = 3e-07
Identities = 27/72 (37%), Positives = 37/72 (50%)
Query: 14 VKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXXNEEEDAKNPLFSY 73
+KEI KFA MG DV +D +LN+ +W + IK VP+ N ED+ N L +
Sbjct: 130 LKEILKFAMKEMGAPDVHIDTRLNKAVWAKRIKNVPYRIRVRLPRKRNAGEDSPNKLHTL 189
Query: 74 VEPVVVASAKGL 85
V V + K L
Sbjct: 190 VTYVPFTTFKNL 201
>Hs17443459 [J] KOG0893 60S ribosomal protein L31
Length = 125
Score = 50.4 bits (119), Expect = 4e-07
Identities = 23/49 (46%), Positives = 33/49 (66%)
Query: 2 HGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPF 50
HGV FKK AP A+KEI+KFA M D+ + +LN+ +W +GI+ V +
Sbjct: 34 HGVRFKKCAPWALKEIRKFAMKEMVAPDMCVATRLNKAVWAKGIRNVSY 82
>Hs17442418 [J] KOG0893 60S ribosomal protein L31
Length = 100
Score = 50.4 bits (119), Expect = 4e-07
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 7 KKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXXNEEEDA 66
KK A A KEI+KFA + MGT DV +D +LN+ I +GI+ VP N++E++
Sbjct: 18 KKHALWAFKEIQKFA-MKMGTPDVCIDTRLNKAIRAKGIRNVPHHVHVRLFRKHNKDENS 76
Query: 67 KNPLFSYVEPVVVASAKGL 85
N L + V + V + K L
Sbjct: 77 PNKLNTVVTCIPVTTFKNL 95
>Hs22045530 [J] KOG0893 60S ribosomal protein L31
Length = 777
Score = 47.8 bits (112), Expect = 3e-06
Identities = 20/49 (40%), Positives = 31/49 (62%)
Query: 2 HGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPF 50
H V KK P A+KEI+K A MG DV +D ++N+ +W +G++ V +
Sbjct: 135 HRVDLKKCGPWALKEIQKLAMKEMGIPDVHIDTRINKALWAKGMRSVSY 183
>Hs20552634 [J] KOG0893 60S ribosomal protein L31
Length = 130
Score = 47.8 bits (112), Expect = 3e-06
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 25 MGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXXNEEEDAKNPLFSYVEPVVVASAKG 84
MGT DV +D + N+ +W +GI+ VP+ NE+ED+ N ++ V V V + G
Sbjct: 4 MGTPDVHIDTRFNKAVWAKGIRNVPYQIHVRLSRKRNEDEDSPNKHYTLVTYVPVTTHSG 63
>Hs22044851 [J] KOG0893 60S ribosomal protein L31
Length = 93
Score = 39.3 bits (90), Expect = 0.001
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 6 FKKRAPKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGV 48
FKKR +A++EI+KFA M D+ D LN+ + +GI+ +
Sbjct: 28 FKKRVSQALREIQKFATKEMAIPDMHTDASLNKAVRAKGIRNI 70
>Hs18550807 [J] KOG0893 60S ribosomal protein L31
Length = 97
Score = 37.4 bits (85), Expect = 0.004
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 6 FKKRAPKAV-KEIKKFAKLHMGTDDVRLDPKLNQEIWKR 43
F+K AP+A+ K+I KFAK MGT D D + ++ +W +
Sbjct: 58 FRKCAPRALSKDIWKFAKKEMGTPDAHTDTRFDKAVWPK 96
>Hs22067774 [J] KOG0893 60S ribosomal protein L31
Length = 140
Score = 35.8 bits (81), Expect = 0.010
Identities = 20/70 (28%), Positives = 36/70 (50%)
Query: 10 APKAVKEIKKFAKLHMGTDDVRLDPKLNQEIWKRGIKGVPFXXXXXXXXXXNEEEDAKNP 69
+P + KF+ +GT ++ D +LN+ I +GI+ +P+ NE+E++ N
Sbjct: 69 SPDKPSLVWKFSMKKIGTLNMCTDTELNKAIGAKGIRNIPYHIHVWLSRKINEDENSPNK 128
Query: 70 LFSYVEPVVV 79
L + V V V
Sbjct: 129 LCTLVTYVPV 138
>Hs22047114 [J] KOG0893 60S ribosomal protein L31
Length = 123
Score = 33.9 bits (76), Expect = 0.039
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 1 MHGVSFKKRAPKAVKEIKKFAKLHMGTDDVRLD 33
+H V FKK P KEI KFA MG DV +D
Sbjct: 64 IHEVGFKKHPPWTFKEIWKFAMKEMGIPDVCID 96
>Hs17475770 [J] KOG0893 60S ribosomal protein L31
Length = 208
Score = 27.7 bits (60), Expect = 2.8
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 4 VSFKKRAPKAVKEIKKFAKLHMGTDDV 30
V FKK +A+KEI KFA MGT V
Sbjct: 35 VGFKKLVFQALKEIWKFAMKEMGTPAV 61
>7292540 [Z] KOG3595 Dyneins heavy chain
Length = 4680
Score = 26.9 bits (58), Expect = 4.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 64 EDAKNPLFSYVEPVVVASAKGLHTVVVD 91
E+ K+PL+ Y E V + ++ L TV++D
Sbjct: 4377 ENIKDPLYRYFEREVTSGSRLLQTVILD 4404
>Hs22061009_1 [J] KOG0893 60S ribosomal protein L31
Length = 78
Score = 26.2 bits (56), Expect = 8.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 3 GVSFKKRAPKAVKEIKKFAKLHMG 26
GV+FKK P ++EI KFA G
Sbjct: 34 GVNFKKHVPLELREIWKFAMKQEG 57
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,434,713
Number of Sequences: 60738
Number of extensions: 174254
Number of successful extensions: 239
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 205
Number of HSP's gapped (non-prelim): 33
length of query: 95
length of database: 30,389,216
effective HSP length: 71
effective length of query: 24
effective length of database: 26,076,818
effective search space: 625843632
effective search space used: 625843632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)