ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0795 good K KOG1474 Transcription Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0795 282503 284485 661
(661 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR399c [K] KOG1474 Transcription initiation factor TFIID subuni... 612 e-175
YDL070w [K] KOG1474 Transcription initiation factor TFIID subuni... 350 3e-96
SPAC631.02 [K] KOG1474 Transcription initiation factor TFIID sub... 232 2e-60
CE25214 [K] KOG1474 Transcription initiation factor TFIID subuni... 162 1e-39
Hs4502453 [K] KOG1474 Transcription initiation factor TFIID subu... 160 4e-39
ECU08g1640 [K] KOG1474 Transcription initiation factor TFIID sub... 151 3e-36
Hs11067749 [K] KOG1474 Transcription initiation factor TFIID sub... 129 2e-29
Hs7657218 [K] KOG1474 Transcription initiation factor TFIID subu... 123 1e-27
Hs19718731 [K] KOG1474 Transcription initiation factor TFIID sub... 123 1e-27
Hs4826806 [K] KOG1474 Transcription initiation factor TFIID subu... 120 7e-27
7290870 [K] KOG1474 Transcription initiation factor TFIID subuni... 114 5e-25
At3g01770 [K] KOG1474 Transcription initiation factor TFIID subu... 91 4e-18
At5g63330 [K] KOG1474 Transcription initiation factor TFIID subu... 90 1e-17
At5g10550 [K] KOG1474 Transcription initiation factor TFIID subu... 86 1e-16
CE19384 [K] KOG1474 Transcription initiation factor TFIID subuni... 86 2e-16
CE18761 [K] KOG1474 Transcription initiation factor TFIID subuni... 86 2e-16
CE05993 [K] KOG1474 Transcription initiation factor TFIID subuni... 86 2e-16
At2g34900 [K] KOG1474 Transcription initiation factor TFIID subu... 86 2e-16
At3g27260 [K] KOG1474 Transcription initiation factor TFIID subu... 84 7e-16
At5g14270 [K] KOG1474 Transcription initiation factor TFIID subu... 83 2e-15
YGR252w [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalyti... 82 3e-15
At5g46550 [K] KOG1474 Transcription initiation factor TFIID subu... 79 3e-14
Hs7304921 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI lar... 77 6e-14
7291557 [K] KOG1474 Transcription initiation factor TFIID subuni... 76 1e-13
7302505 [K] KOG1474 Transcription initiation factor TFIID subuni... 75 3e-13
7301208 [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 75 4e-13
Hs7304923 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI lar... 74 5e-13
7291080 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn... 74 7e-13
At1g73150 [K] KOG1474 Transcription initiation factor TFIID subu... 73 2e-12
At1g06230 [K] KOG1474 Transcription initiation factor TFIID subu... 73 2e-12
Hs4758056 [K] KOG1778 CREB binding protein/P300 and related TAZ ... 72 4e-12
At5g65630 [K] KOG1474 Transcription initiation factor TFIID subu... 72 4e-12
Hs4557557 [K] KOG1778 CREB binding protein/P300 and related TAZ ... 70 8e-12
7301065 [K] KOG1474 Transcription initiation factor TFIID subuni... 69 2e-11
Hs20149648 [R] KOG0644 Uncharacterized conserved protein contain... 69 3e-11
At1g17790 [K] KOG1474 Transcription initiation factor TFIID subu... 69 3e-11
Hs13899209 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catal... 68 4e-11
At1g20670 [R] KOG0955 PHD finger protein BR140/LIN-49 68 5e-11
CE18461 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 67 7e-11
CE28069 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn... 67 1e-10
CE21117 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn... 67 1e-10
Hs7304919 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI lar... 65 3e-10
Hs16445438 [R] KOG0644 Uncharacterized conserved protein contain... 65 3e-10
Hs16445436 [R] KOG0644 Uncharacterized conserved protein contain... 65 3e-10
ECU10g1430 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catal... 65 3e-10
Hs14971411 [O] KOG2177 Predicted E3 ubiquitin ligase 64 6e-10
CE24921 [R] KOG1632 Uncharacterized PHD Zn-finger protein 64 7e-10
CE15910 [R] KOG1632 Uncharacterized PHD Zn-finger protein 64 7e-10
CE15909 [R] KOG1632 Uncharacterized PHD Zn-finger protein 64 7e-10
At1g58025 [K] KOG1474 Transcription initiation factor TFIID subu... 64 1e-09
Hs20555413 [R] KOG0955 PHD finger protein BR140/LIN-49 63 1e-09
SPAC1952.05 [BK] KOG1472 Histone acetyltransferase SAGA/ADA cata... 63 2e-09
7304241 [R] KOG0955 PHD finger protein BR140/LIN-49 62 2e-09
7302099 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 62 2e-09
7295327 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalyti... 62 3e-09
YBR081c [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalyti... 61 5e-09
Hs14971413 [O] KOG2177 Predicted E3 ubiquitin ligase 61 6e-09
CE05310 [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 60 8e-09
SPBC25H2.11c [BK] KOG1472 Histone acetyltransferase SAGA/ADA cat... 60 1e-08
Hs17449320 [O] KOG2177 Predicted E3 ubiquitin ligase 60 1e-08
Hs14971415 [O] KOG2177 Predicted E3 ubiquitin ligase 60 1e-08
Hs14670392 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI la... 59 2e-08
At5g55040 [R] KOG0955 PHD finger protein BR140/LIN-49 59 2e-08
7294564 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalyti... 59 2e-08
Hs20357588_1 [K] KOG0008 Transcription initiation factor TFIID s... 59 2e-08
Hs20357585_1 [K] KOG0008 Transcription initiation factor TFIID s... 59 2e-08
Hs14670390 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI la... 58 5e-08
CE24372 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalyti... 58 5e-08
CE27187 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large... 56 2e-07
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 55 4e-07
At3g52280 [K] KOG1474 Transcription initiation factor TFIID subu... 54 6e-07
At3g19040 [K] KOG0008 Transcription initiation factor TFIID subu... 54 8e-07
Hs6382076 [BK] KOG1472 Histone acetyltransferase SAGA/ADA cataly... 53 1e-06
CE05190 [K] KOG1828 IRF-2-binding protein CELTIX-1 contains BROM... 53 1e-06
Hs11321642 [R] KOG0955 PHD finger protein BR140/LIN-49 53 2e-06
Hs7019345 [K] KOG1828 IRF-2-binding protein CELTIX-1 contains BR... 52 2e-06
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 52 4e-06
SPBC4B4.03 [BK] KOG1827 Chromatin remodeling complex RSC subunit... 51 5e-06
Hs11426183 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catal... 51 5e-06
Hs10835101 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catal... 51 5e-06
Hs4757866 [R] KOG0955 PHD finger protein BR140/LIN-49 51 6e-06
Hs15295343 [R] KOG0955 PHD finger protein BR140/LIN-49 51 6e-06
>YLR399c [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 686
Score = 612 bits (1578), Expect = e-175
Identities = 331/612 (54%), Positives = 389/612 (63%), Gaps = 15/612 (2%)
Query: 25 AKSEGQA---QPEAESDGASNGGXXXXXXXXXXXXEGEADESIDPAASATEQEQEQKHEL 81
A+ +G A P ++ G G E E Q K E
Sbjct: 55 ARLDGDALTSSPAGLAENGIEGATLAANGENGYNATGSGAEDEQQGLKKEEGGQGTKQED 114
Query: 82 KDESAAADTPKS-DMVPAPAPPQEPDMNXXXXXXXXXXXXXXXXXXXXXXXRLKDAKPFH 140
DE++ + P PAPAPP EPDMN RLKDA+PF
Sbjct: 115 LDENSKQELPMEVPKEPAPAPPPEPDMNNLPQNPIPKHQQKHALLAIKAVKRLKDARPFL 174
Query: 141 KPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKA 200
+PVDPV L+IP YFNYI RPMDLSTIERKLN+ AYE PEQ+T+DFNLMV+N IKFNG A
Sbjct: 175 QPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGPNA 234
Query: 201 VISQMARNIQASFEKHMLNMPAKDAPP--QQPKRTKTHPDQPVVIRRAPSNSGRPKREIH 258
ISQMARNIQASFEKHMLNMPAKDAPP + +R+ D P+VIRRA +++GRPKR IH
Sbjct: 235 GISQMARNIQASFEKHMLNMPAKDAPPVIAKGRRSSAQEDAPIVIRRAQTHNGRPKRTIH 294
Query: 259 PPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTY 318
PPK+KDIYPYES KPKSK+ Q MKFCQ VLKEL++KK++S+NYPFLEPVDPV++N PTY
Sbjct: 295 PPKSKDIYPYESKKPKSKRLQQAMKFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTY 354
Query: 319 FDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVF 378
FD+VKEPMDLGT+ KKLN+W+YQT E+FE DVRLVFKNCY FNP+GTIVNMMGHRLE+VF
Sbjct: 355 FDYVKEPMDLGTIAKKLNDWQYQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVF 414
Query: 379 NSKWADRPVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQITNPAIQYLEQQLERMKIE 438
NSKWADRP + T ITNPAIQYLE+QL RMK+E
Sbjct: 415 NSKWADRPNLDDYDSDEDSRTQGDYDDYESEYSESDIDETIITNPAIQYLEEQLARMKVE 474
Query: 439 LQQLKKQELDRIRKERRAARASMKPXXXXXXXXXXXXXNSKSMGKRRKKNSLKVVVTYDM 498
LQQLKKQEL++IRKERR AR S K N+ S G+R KKN LK VVTYDM
Sbjct: 475 LQQLKKQELEKIRKERRLARGSKK--RGKRSKGRSGSKNASSKGRRDKKNKLKTVVTYDM 532
Query: 499 KRTISERIGDLPEGKLEKAVDIIRKSMPEIGADDEVELDIEQLDETTILTLYNTFFRKYD 558
KR I+ERI DLP KLE+A+DII+KSMP I DDEVELD++ LD TILTLYNTFFR+Y+
Sbjct: 533 KRIITERINDLPTSKLERAIDIIKKSMPNISEDDEVELDLDTLDNHTILTLYNTFFRQYE 592
Query: 559 TSNNGYAGSDDAILSVPSETDLRHNSLSPNXXXXXXXXXXXXALSXXXXXXXXXXXXXXL 618
+S+ G D S +SLSP ALS L
Sbjct: 593 SSSGASNGLDGT-----SGVTRDASSLSP--TSAGSRKRRSKALSQEEQSRQIEKIKNKL 645
Query: 619 ASFNANSPMSPN 630
A ++ SP+S N
Sbjct: 646 AILDSASPLSQN 657
>YDL070w [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 638
Score = 350 bits (899), Expect = 3e-96
Identities = 191/460 (41%), Positives = 267/460 (57%), Gaps = 51/460 (11%)
Query: 132 RLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSN 191
RLKDA+PF KPVDP+ALNIP YFNY+ PMDLS IE KL + Y + EQVT DF MV N
Sbjct: 151 RLKDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDN 210
Query: 192 CIKFNGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHP------DQPVVIRR 245
C+ FNG ++ IS MA+ IQ FEK + MP + P K+T + D P+VIRR
Sbjct: 211 CLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVLPASALKKTSRNRKKNEDMDSPLVIRR 270
Query: 246 APSNS---------------GRPKREIHPPKTKDIYP-YESNKPKSKKHQMEMKFCQQVL 289
+ S + GRPKR IHPPK+KD++ YE++KPKSK Q + + C ++L
Sbjct: 271 SVSTTNDNIGESGNREGVSGGRPKRTIHPPKSKDLFDIYENSKPKSKTLQKKFRTCLKIL 330
Query: 290 KELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHD 349
K L+SKK S N+PFL+PVDP+ALN P YFD VK PMDLGT+ L NW+Y+T ++F D
Sbjct: 331 KVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDD 390
Query: 350 VRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRPVI---PXXXXXXXXXXXXXXXXX 406
+ LVF NC+ FNPEG V+ MG +L+++FN W + I
Sbjct: 391 LNLVFYNCFQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSS 450
Query: 407 XXXXXXXXXXXTQITNPAIQYLEQQLERMKIELQQLKKQELDRIRKERRAARASMKPXXX 466
ITNPAIQYLEQ+L++M++ELQQLK+QEL ++ KER+
Sbjct: 451 DDEYDDEDINENDITNPAIQYLEQKLKKMEVELQQLKRQELSKLSKERK----------- 499
Query: 467 XXXXXXXXXXNSKSMGKRRKKNSLKVVVTYDMKRTISERIGDLPEGKLEKAVDIIRKSMP 526
K +GK + D+K++I+++I +L + ++ + II+ S+P
Sbjct: 500 -----------RKHLGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGMIRIIKNSLP 548
Query: 527 E----IGADDEVELDIEQLDETTILTLYNTFFRKYDTSNN 562
+DE+E+D++ LDE TI +Y +F K + +N+
Sbjct: 549 ADEILTSNEDEIEIDLDILDEATIARIYERYFEKKNNNNS 588
>SPAC631.02 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 727
Score = 232 bits (591), Expect = 2e-60
Identities = 155/538 (28%), Positives = 239/538 (43%), Gaps = 84/538 (15%)
Query: 33 PEAESDGASNGGXXXXXXXXXXXXEGEADESIDPAA--------SATEQEQEQKHELKDE 84
P + DGASN + EA ES P+A + + +E H DE
Sbjct: 163 PSSLKDGASN----TVTNDASNKIKSEASESASPSALQALDSTAAGSSKEHSSPH---DE 215
Query: 85 SAAADTPKSDMVPAPAPPQEPDMNXXXXXXXXXXXXXXXXXXXXXXXRLKDAKPFHKPVD 144
+ + D P Q ++ R +D+ PF PVD
Sbjct: 216 TVKKEENDKDQYPPMTKEQHKYIHAMLRQLR----------------RGRDSIPFRAPVD 259
Query: 145 PVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQ 204
PV NIP Y I P+DL T+++K + Y + + DD NLM SNC +NG ++ +
Sbjct: 260 PVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGTESPVGV 319
Query: 205 MARNIQASFEKHMLNMPAK-----DAPPQQPKRTKTHPDQPVVIRRAP---SNSGRPKRE 256
M +N+QA+FE+ + +P+ P ++P R+ T P RR SNS RE
Sbjct: 320 MGKNLQATFERQLKQLPSAYVTSYSRPGRRP-RSMTAPKGGARTRRQAAMYSNSSSGIRE 378
Query: 257 IHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCP 316
+Y KP +K EMKFCQ VLKELL K++ ++ YPF +PV+P A CP
Sbjct: 379 T-------MYDL---KPHRRKDAAEMKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCP 428
Query: 317 TYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLED 376
YF +K PMDLGT+Q KLN+ EY + + FE D+ L+FKNCY FN GT V++MG +LE
Sbjct: 429 DYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLES 488
Query: 377 VFNSKWADRPVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQITNPAIQYLEQQLERMK 436
+F WA++P + + + +Q+ +++
Sbjct: 489 IFQKLWANKPDFDSETYMGMSSVNTDYYYGDNEVFDSGDEFLEDDGEEFEAVNRQIHKLQ 548
Query: 437 IELQQLKKQELDRIRKERRAARASMKPXXXXXXXXXXXXXNSKSMGKRRKKNSLKV---- 492
LQ +K + S S+ +R + SL V
Sbjct: 549 STLQAMKSR------------------------------ARSSSVSRRSRSRSLSVDIYP 578
Query: 493 VVTYDMKRTISERIGDLPEGKLEKAVDIIRKSMPEIGADDEVELDIEQLDETTILTLY 550
+TY+M+ ++E+ L +L +I+R ++P + DE+E+D+ + +Y
Sbjct: 579 PITYEMQNELAEQCNYLSADQLSHVAEILRAALPHLRNTDEIEIDVSAMPPDVFYKVY 636
>CE25214 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 851
Score = 162 bits (411), Expect = 1e-39
Identities = 145/550 (26%), Positives = 219/550 (39%), Gaps = 119/550 (21%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
K PF KPVD VAL IPLY + RPMDL TIE +L Y ++ DD + NC
Sbjct: 59 KHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDIETVFQNCY 118
Query: 194 KFNGDKAVISQMARNI---------QASFEKHMLNM--------PAKD------------ 224
FNG + ++ MA+N+ QA E+H +++ PAK
Sbjct: 119 TFNGKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKKPAKSDGGSKSSSSKKN 178
Query: 225 ---APPQQPKR--------TKTHPDQPVVIRRAPSNSGRPKREIHPPKT--KDIYPYESN 271
P + P T P V A S + +P+R++ KT + +
Sbjct: 179 DARGPSEAPSEAGSEVSSVTTASAAAPTVSESA-SVAAKPERKVAGKKTGKRKAESEDDE 237
Query: 272 KP------------KSKKHQM---EMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCP 316
KP K + HQ MK C ++L + +KKY F +PF EPVD L
Sbjct: 238 KPEPLRAKREVAVVKKEVHQPLLPSMKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLH 297
Query: 317 TYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLED 376
Y +KEPMDL +++ K+ + Y+ +FEHDVRL+ +NC+ +NP G V+ G R ++
Sbjct: 298 DYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQE 357
Query: 377 VFNSKWAD---------------RPVIPXXXXXXXXX--------XXXXXXXXXXXXXXX 413
VF+ +WA+ P+ P
Sbjct: 358 VFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKEPKESRKEHKKETTFEASGAK 417
Query: 414 XXXXTQITNPAIQYLEQQLERMKIEL--QQLKKQELDRIRKER-------------RAAR 458
QI N A+ + ++ E++K EL Q K +L ++ R R
Sbjct: 418 SEDLMQINN-ALSMIREREEKLKAELAAAQAIKDKLTSVKNRREDNPNEPFPEKLINETR 476
Query: 459 ASMKPXXXXXXXXXXXXXNSKSMGKRRKKNSL--------------KVVVTYDMKRTISE 504
A + G+ +K S K+ +TY+ KR +S
Sbjct: 477 ALCTTQVGQNASSSSASSAALRNGRSKKAASARLYGYEFDSDDEDNKMALTYEEKRNLSN 536
Query: 505 RIGDLPEGKLEKAVDIIRKS-----MPEIGADDEVELDIEQLDETTILTLYNTFFRKYDT 559
I +LP +L + II++ M + D EVELD E L + + + F + T
Sbjct: 537 LINNLPNNQLNTIISIIQRRERSALMQQQLDDSEVELDFESLGDMCLREM-GAFIKTIPT 595
Query: 560 SNNGYAGSDD 569
N G D+
Sbjct: 596 LNGN--GDDE 603
Score = 67.0 bits (162), Expect = 9e-11
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 274 KSKKHQMEMKFCQQ-VLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQ 332
K +H ++ + VLKE K+ +PF +PVD VAL P Y + V PMDL T++
Sbjct: 36 KPTRHTNKLDYIMTTVLKEAGKHKHV---WPFQKPVDAVALCIPLYHERVARPMDLKTIE 92
Query: 333 KKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRP 386
+L + Y ++E D+ VF+NCY FN + V +M + +V P
Sbjct: 93 NRLKSTYYTCAQECIDDIETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQAP 146
>Hs4502453 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 947
Score = 160 bits (406), Expect = 4e-39
Identities = 135/517 (26%), Positives = 214/517 (41%), Gaps = 105/517 (20%)
Query: 138 PFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFN- 196
PF +PVD V L +P Y+ I PMDL+TI+++L Y + +DFN M SNC +N
Sbjct: 51 PFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNK 110
Query: 197 -GDKAV-------------ISQMAR-----------------NIQASFEKHMLNMPAKDA 225
GD V +SQM + NI S K + A +
Sbjct: 111 PGDDIVLMAQALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEK 170
Query: 226 PPQQPKRTKTHPDQPV----VIRRAPSNSG-----------RPKREIHPPKTKDIY---- 266
+Q + P + V++ A NS + K + P T +
Sbjct: 171 VFKQQEIPSVFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSE 230
Query: 267 -------------PYESNKPKSK--------------KHQMEMKFCQQVLKELLSKKYSS 299
P + N PK+ K +++ C ++LKE+L+KK+ S
Sbjct: 231 FSPTFTEKSVALPPIKENMPKNVLPDSQQQYNVVETVKVTEQLRHCSEILKEMLAKKHFS 290
Query: 300 FNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYA 359
+ +PF PVD AL Y+D VK PMDLGT+++K++N EY+ + F DVRL+F NCY
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYSFAADVRLMFMNCYK 350
Query: 360 FNPEGTIVNMMGHRLEDVFNSKWADRPVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQ 419
+NP V M L+DVF + ++ P+ P
Sbjct: 351 YNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASSEGN 410
Query: 420 ITNPA-------IQYLEQQLERMKIELQQL---------KKQELDRIRKERRAARASMKP 463
++ + + L++QL+ + +LQ L KK+E + K++ S +
Sbjct: 411 SSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVNNSNEN 470
Query: 464 XXXXXXXXXXXXXNSKSMGKRRKKNSLKV---------VVTYDMKRTISERIGDLPEGKL 514
+ ++ K+RK+ + + + YD KR +S I LP KL
Sbjct: 471 PRKMCEQMRLKEKSKRNQPKKRKQQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKL 530
Query: 515 EKAVDIIRKSMPEIGAD--DEVELDIEQLDETTILTL 549
+ V II+ P + DE+E+D E L +T+ L
Sbjct: 531 GRVVHIIQSREPSLSNSNPDEIEIDFETLKASTLREL 567
Score = 81.3 bits (199), Expect = 4e-15
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 257 IHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCP 316
++PP + I N K+ + ++++ Q+V+ + L K SF++PF PVD V L P
Sbjct: 12 VNPPPPEYI-----NTKKNGRLTNQLQYLQKVVLKDLWKH--SFSWPFQRPVDAVKLKLP 64
Query: 317 TYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLED 376
Y+ +K PMDL T++K+L N Y + E D +F NCY +N G + +M LE
Sbjct: 65 DYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEK 124
Query: 377 VFNSKWADRP 386
+F K + P
Sbjct: 125 LFMQKLSQMP 134
Score = 65.5 bits (158), Expect = 3e-10
Identities = 48/185 (25%), Positives = 70/185 (36%), Gaps = 3/185 (1%)
Query: 39 GASNGGXXXXXXXXXXXXEGEADESIDPAASATEQEQEQKHELKDESAAADTPKSDMVPA 98
GAS + +AD + PA SA + E ++S A K +M
Sbjct: 194 GASVNSSSQTAAQVTKGVKRKADTTT-PATSAVKASSEFSPTFTEKSVALPPIKENMPKN 252
Query: 99 PAPPQEPDMNXXXXXXXXXXXXXXXXXXXXXXXR--LKDAKPFHKPVDPVALNIPLYFNY 156
P + N + A PF+ PVD AL + Y++
Sbjct: 253 VLPDSQQQYNVVETVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDV 312
Query: 157 IPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKH 216
+ PMDL TI+ K++ Y+ D LM NC K+N + MAR +Q FE H
Sbjct: 313 VKNPMDLGTIKEKMDNQEYKDAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETH 372
Query: 217 MLNMP 221
+P
Sbjct: 373 FSKIP 377
>ECU08g1640 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 370
Score = 151 bits (381), Expect = 3e-36
Identities = 92/244 (37%), Positives = 128/244 (51%), Gaps = 27/244 (11%)
Query: 132 RLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSN 191
R +A PF +PVDPV L IP Y I PMDLSTI +KL+ YE PE D LM SN
Sbjct: 29 RNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDSKEYEGPEGFDGDMRLMFSN 88
Query: 192 CIKFNGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSG 251
C +N V+ +M + ++A + M MP + P++ K+T + P V G
Sbjct: 89 CYTYNPPGTVVHEMGKGLEAVYTDLMAGMPQE--IPKKRKKT----EMPAV--------G 134
Query: 252 RPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPV 311
RPK+ K D E + +FC + L +L+ K+ ++N+PFLEPVD
Sbjct: 135 RPKQVKRNVKGSDGMKAE-----------DYEFCSETLSDLVKPKHKAYNWPFLEPVDGD 183
Query: 312 ALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMG 371
+ P Y+ +KEPMDL T++ KL YQ+ EEF D+ L+ +NC FN GT V + G
Sbjct: 184 LV--PGYYSVIKEPMDLQTMRSKLEQRRYQSVEEFGRDLELIVENCKKFNAPGTEVYVCG 241
Query: 372 HRLE 375
E
Sbjct: 242 QEFE 245
Score = 104 bits (259), Expect = 5e-22
Identities = 51/106 (48%), Positives = 70/106 (65%), Gaps = 3/106 (2%)
Query: 281 EMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEY 340
++K+C Q+L L K +S PFLEPVDPV L P Y + +K PMDL T++KKL++ EY
Sbjct: 16 QLKYCSQILTRL---KRNSNAPPFLEPVDPVKLGIPDYPEKIKHPMDLSTIRKKLDSKEY 72
Query: 341 QTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRP 386
+ E F+ D+RL+F NCY +NP GT+V+ MG LE V+ A P
Sbjct: 73 EGPEGFDGDMRLMFSNCYTYNPPGTVVHEMGKGLEAVYTDLMAGMP 118
Score = 52.0 bits (123), Expect = 3e-06
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 138 PFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNG 197
PF +PVD +P Y++ I PMDL T+ KL Y++ E+ D L+V NC KFN
Sbjct: 175 PFLEPVDGDL--VPGYYSVIKEPMDLQTMRSKLEQRRYQSVEEFGRDLELIVENCKKFNA 232
Query: 198 DKAVISQMARNIQASFEKHMLNMPAKD 224
+ + + + + HM + D
Sbjct: 233 PGTEVYVCGQEFEKAVKMHMQKVSPHD 259
>Hs11067749 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 726
Score = 129 bits (323), Expect = 2e-29
Identities = 99/376 (26%), Positives = 165/376 (43%), Gaps = 64/376 (17%)
Query: 226 PPQQPKRTKTHPDQPVVIRRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQME--MK 283
P PK+ K VV RR + GRP I PPK KD+ E + KK ++ ++
Sbjct: 266 PLSDPKQAK------VVARR--ESGGRP---IKPPK-KDLEDGEVPQHAGKKGKLSEHLR 313
Query: 284 FCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTS 343
+C +L+E+LSKK++++ +PF +PVD AL Y D +K PMDL TV++K++ EY +
Sbjct: 314 YCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDA 373
Query: 344 EEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWA-------DRPVIPXXXXXXX 396
+ F DVRL+F NCY +NP V M +L+DVF ++A + P +P
Sbjct: 374 QGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPVEAPALPAPAAPMV 433
Query: 397 XXXXXXXXXXXXXXXXXXXXXTQ----------------------------ITNPAIQYL 428
++ + P +
Sbjct: 434 SKGAESSRSSEESSSDSGSSDSEEERATRLAELQEQLKAVHEQLAALSQAPVNKPKKKKE 493
Query: 429 EQQLERMKIELQQLKKQELDRIRKERRAARASMKPXXXXXXXXXXXXXNSKSMGKRRKKN 488
+++ E+ K + ++ K++ + +E++A A ++ + G++ KK
Sbjct: 494 KKEKEKKKKDKEKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAGRQLKKG 553
Query: 489 SLK-------------VVVTYDMKRTISERIGDLPEGKLEKAVDIIRKSMPEI--GADDE 533
+ + ++YD KR +S I LP KL + V II+ P + DE
Sbjct: 554 GKQASASYDSEEEEEGLPMSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDE 613
Query: 534 VELDIEQLDETTILTL 549
+E+D E L TT+ L
Sbjct: 614 IEIDFETLKPTTLREL 629
Score = 83.6 bits (205), Expect = 9e-16
Identities = 46/141 (32%), Positives = 71/141 (49%), Gaps = 7/141 (4%)
Query: 246 APSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFL 305
AP+ ++PP P SN K + ++++ Q V+ + L K F +PF
Sbjct: 8 APAGIPATPGPVNPPP-----PEVSNPSKPGRKTNQLQYMQNVVVKTLWKH--QFAWPFY 60
Query: 306 EPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGT 365
+PVD + LN P Y +K PMD+GT++K+L N Y ++ E D +F NCY +N
Sbjct: 61 QPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTD 120
Query: 366 IVNMMGHRLEDVFNSKWADRP 386
+ +M LE +F K A P
Sbjct: 121 DIVLMAQALEKIFLQKVAQMP 141
Score = 71.6 bits (174), Expect = 4e-12
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF+KPVD AL + Y + I PMDLST++RK++ Y + D LM SNC K+
Sbjct: 331 AWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKY 390
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSN 249
N + MAR +Q FE MP D P + P P P+V + A S+
Sbjct: 391 NPPDHEVVAMARKLQDVFEMRFAKMP--DEPVEAP--ALPAPAAPMVSKGAESS 440
Score = 65.5 bits (158), Expect = 3e-10
Identities = 34/98 (34%), Positives = 54/98 (54%), Gaps = 2/98 (2%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF++PVD + LN+P Y I PMD+ TI+++L + Y + + DFN M +NC +
Sbjct: 56 AWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIY 115
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAP--PQQPK 231
N I MA+ ++ F + + MP ++ P PK
Sbjct: 116 NKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPK 153
>Hs7657218 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 722
Score = 123 bits (308), Expect = 1e-27
Identities = 104/389 (26%), Positives = 158/389 (39%), Gaps = 62/389 (15%)
Query: 221 PAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPK-----------REIHPPKTKDIYPYE 269
P K + K T P I PS PK R + PPK KD+ P
Sbjct: 281 PVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPK-KDV-PDS 338
Query: 270 SNKP---KSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPM 326
P KS K ++K C +LKE+ +KK++++ +PF +PVD AL Y D +K PM
Sbjct: 339 QQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPM 398
Query: 327 DLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRP 386
D+ T++ KL EY+ ++EF DVRL+F NCY +NP V M +L+DVF ++A P
Sbjct: 399 DMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMP 458
Query: 387 --------------VIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQITNPAIQYLEQQL 432
V P + + L++QL
Sbjct: 459 DEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQL 518
Query: 433 ERMKIEL------QQLKKQELDRIRKERRAARASMKPXXXXXXXXXXXXXNSKSMGKRRK 486
+ + +L QQ K ++ ++ +KE++ + K K K
Sbjct: 519 KAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNS 578
Query: 487 KNS---------LK---------------VVVTYDMKRTISERIGDLPEGKLEKAVDIIR 522
NS +K ++Y+ KR +S I LP KL + V II+
Sbjct: 579 SNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQ 638
Query: 523 KSMPEI--GADDEVELDIEQLDETTILTL 549
P + DE+E+D E L +T+ L
Sbjct: 639 SREPSLKNSNPDEIEIDFETLKPSTLREL 667
Score = 85.1 bits (209), Expect = 3e-16
Identities = 46/128 (35%), Positives = 72/128 (55%), Gaps = 9/128 (7%)
Query: 259 PPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTY 318
PP+T + NKPK + +Q++ + VLK L +++ +PF +PVD V LN P Y
Sbjct: 47 PPETSN-----PNKPKRQTNQLQY-LLRVVLKTLWKHQFA---WPFQQPVDAVKLNLPDY 97
Query: 319 FDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVF 378
+ +K PMD+GT++K+L N Y ++E D +F NCY +N G + +M LE +F
Sbjct: 98 YKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Query: 379 NSKWADRP 386
K + P
Sbjct: 158 LQKINELP 165
Score = 74.3 bits (181), Expect = 5e-13
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF+KPVD AL + Y + I PMD+STI+ KL Y ++ D LM SNC K+
Sbjct: 373 AWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKY 432
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKR 255
N + MAR +Q FE MP P++PVV +P+ P +
Sbjct: 433 NPPDHEVVAMARKLQDVFEMRFAKMP-------------DEPEEPVVAVSSPA-VPPPTK 478
Query: 256 EIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQV 288
+ PP + D S+ S E + Q++
Sbjct: 479 VVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRL 511
Score = 63.2 bits (152), Expect = 1e-09
Identities = 31/89 (34%), Positives = 50/89 (55%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF +PVD V LN+P Y+ I PMD+ TI+++L + Y ++ DFN M +NC +
Sbjct: 80 AWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIY 139
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKD 224
N I MA ++ F + + +P ++
Sbjct: 140 NKPGDDIVLMAEALEKLFLQKINELPTEE 168
>Hs19718731 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 1362
Score = 123 bits (308), Expect = 1e-27
Identities = 104/389 (26%), Positives = 158/389 (39%), Gaps = 62/389 (15%)
Query: 221 PAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPK-----------REIHPPKTKDIYPYE 269
P K + K T P I PS PK R + PPK KD+ P
Sbjct: 281 PVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPK-KDV-PDS 338
Query: 270 SNKP---KSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPM 326
P KS K ++K C +LKE+ +KK++++ +PF +PVD AL Y D +K PM
Sbjct: 339 QQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPM 398
Query: 327 DLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRP 386
D+ T++ KL EY+ ++EF DVRL+F NCY +NP V M +L+DVF ++A P
Sbjct: 399 DMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMP 458
Query: 387 --------------VIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQITNPAIQYLEQQL 432
V P + + L++QL
Sbjct: 459 DEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQL 518
Query: 433 ERMKIEL------QQLKKQELDRIRKERRAARASMKPXXXXXXXXXXXXXNSKSMGKRRK 486
+ + +L QQ K ++ ++ +KE++ + K K K
Sbjct: 519 KAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNS 578
Query: 487 KNS---------LK---------------VVVTYDMKRTISERIGDLPEGKLEKAVDIIR 522
NS +K ++Y+ KR +S I LP KL + V II+
Sbjct: 579 SNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQ 638
Query: 523 KSMPEI--GADDEVELDIEQLDETTILTL 549
P + DE+E+D E L +T+ L
Sbjct: 639 SREPSLKNSNPDEIEIDFETLKPSTLREL 667
Score = 85.1 bits (209), Expect = 3e-16
Identities = 46/128 (35%), Positives = 72/128 (55%), Gaps = 9/128 (7%)
Query: 259 PPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTY 318
PP+T + NKPK + +Q++ + VLK L +++ +PF +PVD V LN P Y
Sbjct: 47 PPETSN-----PNKPKRQTNQLQY-LLRVVLKTLWKHQFA---WPFQQPVDAVKLNLPDY 97
Query: 319 FDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVF 378
+ +K PMD+GT++K+L N Y ++E D +F NCY +N G + +M LE +F
Sbjct: 98 YKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157
Query: 379 NSKWADRP 386
K + P
Sbjct: 158 LQKINELP 165
Score = 74.3 bits (181), Expect = 5e-13
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF+KPVD AL + Y + I PMD+STI+ KL Y ++ D LM SNC K+
Sbjct: 373 AWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKY 432
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKR 255
N + MAR +Q FE MP P++PVV +P+ P +
Sbjct: 433 NPPDHEVVAMARKLQDVFEMRFAKMP-------------DEPEEPVVAVSSPA-VPPPTK 478
Query: 256 EIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQV 288
+ PP + D S+ S E + Q++
Sbjct: 479 VVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRL 511
Score = 63.2 bits (152), Expect = 1e-09
Identities = 31/89 (34%), Positives = 50/89 (55%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF +PVD V LN+P Y+ I PMD+ TI+++L + Y ++ DFN M +NC +
Sbjct: 80 AWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIY 139
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKD 224
N I MA ++ F + + +P ++
Sbjct: 140 NKPGDDIVLMAEALEKLFLQKINELPTEE 168
>Hs4826806 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 801
Score = 120 bits (301), Expect = 7e-27
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 14/171 (8%)
Query: 221 PAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQM 280
PA +PK + P +RR SGRP I PP+ KD+ + SKK ++
Sbjct: 299 PASPPGSLEPKAARLPP-----MRR---ESGRP---IKPPR-KDLPDSQQQHQSSKKGKL 346
Query: 281 --EMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNW 338
++K C +LKELLSKK++++ +PF +PVD AL Y D +K PMDL TV++K+ N
Sbjct: 347 SEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENR 406
Query: 339 EYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRPVIP 389
+Y+ ++EF DVRL+F NCY +NP V M +L+DVF ++A P P
Sbjct: 407 DYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEP 457
Score = 77.8 bits (190), Expect = 5e-14
Identities = 43/141 (30%), Positives = 71/141 (49%), Gaps = 4/141 (2%)
Query: 246 APSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFL 305
+P+ + P ++ P P SN K + ++++ +V+ + L K F +PF
Sbjct: 45 SPTMASVPALQLTPANPPP--PEVSNPKKPGRVTNQLQYLHKVVMKALWKH--QFAWPFR 100
Query: 306 EPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGT 365
+PVD V L P Y +K+PMD+GT++++L N Y + E D +F NCY +N
Sbjct: 101 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 160
Query: 366 IVNMMGHRLEDVFNSKWADRP 386
+ +M LE +F K A P
Sbjct: 161 DIVLMAQTLEKIFLQKVASMP 181
Score = 69.3 bits (168), Expect = 2e-11
Identities = 37/92 (40%), Positives = 49/92 (53%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF+KPVD AL + Y + I PMDLST++RK+ Y ++ D LM SNC K+
Sbjct: 369 AWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKY 428
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPP 227
N + MAR +Q FE MP + P
Sbjct: 429 NPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 460
Score = 64.3 bits (155), Expect = 6e-10
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 88 ADTPKSDMVPAPAPPQEPDMNXXXXXXXXXXXXXXXXXXXXXXXRLKDAKPFHKPVDPVA 147
A P + PA PP E N + + A PF +PVD V
Sbjct: 49 ASVPALQLTPANPPPPEVS-NPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVK 107
Query: 148 LNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQMAR 207
L +P Y I +PMD+ TI+R+L + Y + DFN M +NC +N I MA+
Sbjct: 108 LGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQ 167
Query: 208 NIQASFEKHMLNMPAKD 224
++ F + + +MP ++
Sbjct: 168 TLEKIFLQKVASMPQEE 184
>7290870 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 1998
Score = 114 bits (285), Expect = 5e-25
Identities = 52/108 (48%), Positives = 75/108 (69%)
Query: 282 MKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQ 341
+K C ++LKEL SKK+S + +PF +PVD L Y D +K+PMDLGTV++K++N EY+
Sbjct: 481 LKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYK 540
Query: 342 TSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRPVIP 389
++ EF DVRL+F NCY +NP V MG +L+DVF ++A+ P P
Sbjct: 541 SAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDEP 588
Score = 77.4 bits (189), Expect = 6e-14
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 300 FNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYA 359
F++PF +PVD LN P Y +K+PMD+GT++K+L N Y +++E D +F NCY
Sbjct: 55 FSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYV 114
Query: 360 FNPEGTIVNMMGHRLEDVFNSKWADRP 386
+N G V +M LE VF K P
Sbjct: 115 YNKPGEDVVVMAQTLEKVFLQKIESMP 141
Score = 63.5 bits (153), Expect = 1e-09
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF+KPVD L + Y + I +PMDL T++RK++ Y++ + D L+ +NC K+
Sbjct: 500 AWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKY 559
Query: 196 NGDKAVISQMARNIQASFEKHMLNMP 221
N + M R +Q FE N+P
Sbjct: 560 NPPDHDVVAMGRKLQDVFEMRYANIP 585
Score = 62.8 bits (151), Expect = 2e-09
Identities = 29/87 (33%), Positives = 51/87 (58%)
Query: 138 PFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNG 197
PF +PVD LN+P Y I +PMD+ TI+++L + Y + ++ DFN M +NC +N
Sbjct: 58 PFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNK 117
Query: 198 DKAVISQMARNIQASFEKHMLNMPAKD 224
+ MA+ ++ F + + +MP ++
Sbjct: 118 PGEDVVVMAQTLEKVFLQKIESMPKEE 144
>At3g01770 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 601
Score = 91.3 bits (225), Expect = 4e-18
Identities = 53/152 (34%), Positives = 74/152 (47%), Gaps = 9/152 (5%)
Query: 237 PDQPVVIRRAPSNSGRPKR----EIHPPKTKDIYPYESNKPK--SKKHQMEMKFCQQVLK 290
P +V SN RPK K + P+ + KP+ + + MK C+ +LK
Sbjct: 79 PISKIVTSTPASNVSRPKSFGMSRCSTGPGKRVLPFTATKPEPVTTSTMLRMKQCESLLK 138
Query: 291 ELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDV 350
L+S+++ + F PVD V LN P YF +K PMDLGTV+ KL + Y + EF DV
Sbjct: 139 RLMSQQHC---WLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADV 195
Query: 351 RLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
RL F+N +NP V L F +W
Sbjct: 196 RLTFRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
Score = 56.2 bits (134), Expect = 2e-07
Identities = 28/76 (36%), Positives = 39/76 (50%)
Query: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
F+ PVD V LNIP YF I PMDL T++ KL Y +P + + D L N + +N
Sbjct: 149 FNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPS 208
Query: 199 KAVISQMARNIQASFE 214
+ + A + FE
Sbjct: 209 DNNVYRFADTLSKFFE 224
>At5g63330 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 477
Score = 90.1 bits (222), Expect = 1e-17
Identities = 48/116 (41%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 267 PYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPM 326
P N P S MK C+ +L L S K +PF PVDPV LN P YF+ +K PM
Sbjct: 147 PSRLNVPTSYTVASVMKECETLLNRLWSHKSG---WPFRTPVDPVMLNIPDYFNVIKHPM 203
Query: 327 DLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
DLGT++ +L EY + +F DVRL F N A+NP G + M + F S W
Sbjct: 204 DLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGW 259
Score = 66.6 bits (161), Expect = 1e-10
Identities = 42/117 (35%), Positives = 51/117 (42%), Gaps = 3/117 (2%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
K PF PVDPV LNIP YFN I PMDL TI +L Y +P D L SN I
Sbjct: 176 KSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSI 235
Query: 194 KFNGDKAVISQMARNIQASFEKHMLNMPAK---DAPPQQPKRTKTHPDQPVVIRRAP 247
+N MA+ I FE ++ K PP P + + + AP
Sbjct: 236 AYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVAP 292
>At5g10550 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 678
Score = 86.3 bits (212), Expect = 1e-16
Identities = 84/321 (26%), Positives = 133/321 (41%), Gaps = 36/321 (11%)
Query: 267 PYESNKPKSKKH-----------QMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNC 315
P+ +++P K+H + M C Q+L +L+ K+S + FL PVD V L
Sbjct: 224 PFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLMKHKWS---WVFLNPVDVVGLGL 280
Query: 316 PTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLE 375
Y V +PMDLGTV+ L Y++ +F DVRL F N ++NP+G V +M +L
Sbjct: 281 HDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLL 340
Query: 376 DVFNSKWADRPVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQITN----PAIQYLEQQ 431
F+ W + P + N P + ++
Sbjct: 341 SQFD-VWFN-PTLKRFEAQEVKVMGSSSRPGPEDNQRVWNQNNVAENARKGPEQISIAKK 398
Query: 432 LERMKIELQQLKKQELDRIRKERRAARASM----------KPXXXXXXXXXXXXXNSKSM 481
L+ +K L L + I ++ + + +P N
Sbjct: 399 LDSVKPLLPTLPPPPVIEITRDPSPPPSPVQPPPPPSPPPQPVNQVEASLEVRETNKGRK 458
Query: 482 GKRRK---KNSLKVVVTYDMKRTISERIGDLPEGKLEKAVDIIRKSMPEIGAD-DEVELD 537
GK K K+ K +T D K + + +LP KL + + I+RK ++ D DE+ELD
Sbjct: 459 GKLPKPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELD 518
Query: 538 IEQLDETTI--LTLYNTFFRK 556
IE LD T+ L + T +RK
Sbjct: 519 IEALDNETLWELDRFVTNYRK 539
>CE19384 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 374
Score = 85.9 bits (211), Expect = 2e-16
Identities = 40/102 (39%), Positives = 58/102 (56%)
Query: 281 EMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEY 340
E+K C +LKE + SF +PF +PVD V L Y + +K+PMD+ T++KKL EY
Sbjct: 118 ELKKCLSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEY 177
Query: 341 QTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
T+ EF+ D +L+ NC +N EG V + F +KW
Sbjct: 178 DTAVEFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKW 219
Score = 64.7 bits (156), Expect = 4e-10
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 138 PFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNG 197
PF KPVD V L + Y I +PMD+STI +KL + Y+T + +DF LM++NC+ +N
Sbjct: 140 PFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAVEFKEDFKLMINNCLTYNN 199
Query: 198 DKAVISQMARNIQASF 213
+ ++ A + F
Sbjct: 200 EGDPVADFALQFRKKF 215
>CE18761 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 1087
Score = 85.5 bits (210), Expect = 2e-16
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 176 ETPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQP-KRTK 234
E+ + DD + V + + D + A + S + ++N K + Q P K+ K
Sbjct: 444 ESVDDNNDDESSKVDSINFDDDDDTATEKDAESRAESVQPEVVNEEPKPSTSQPPSKKRK 503
Query: 235 THPDQPVVIRR----APSNSGRPKREIHPPKTKD-IYPYESNKPKSKKHQME-MKFCQQV 288
+P V + A + P+ E K + + ++ P+ + E KFC ++
Sbjct: 504 AENGEPAVAVKIATPATPVAAHPQEETPRRKNPNTLIEWKHLVPRWQGKIPEWQKFCSKL 563
Query: 289 LKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEH 348
L E+ S K F F PVDP+ L Y + + PMDL T++KKL+ +Y EEF H
Sbjct: 564 LNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVH 623
Query: 349 DVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
D+ L+ NC +NP+G+ + L F +W
Sbjct: 624 DINLMVDNCCKYNPKGSPAHSNALELRSFFEQRW 657
Score = 68.9 bits (167), Expect = 2e-11
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A+ F+ PVDP+ L I Y I PMDL TI++KL+ Y PE+ D NLMV NC K+
Sbjct: 576 AQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKY 635
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPP 227
N + A +++ FE+ P P
Sbjct: 636 NPKGSPAHSNALELRSFFEQRWKLFPRPGVDP 667
Score = 68.9 bits (167), Expect = 2e-11
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 8/220 (3%)
Query: 9 LKEAHETGIFDTKPVDAKSEG-QAQPEAESDGASNGGXXXXXXXXXXXXEGEADESIDPA 67
++E E + + D K E + ++ES G+ +G E E ++ A
Sbjct: 181 MEEVEEPIVASEEVPDKKPESVKESTDSESSGSEHG---FEKMDTAEKVEDECNDDEVAA 237
Query: 68 ASATEQEQEQKHELKDESAAADTPKSDMVPAPAPPQ-EPDMNXXXXXXXXXXXXXXXXXX 126
++ TE E E + D +TP+ + V P+ EP
Sbjct: 238 SNGTE-EPEPGDKAADTVNPWETPRQEPVDGVVQPRTEPPAGKPTRHTNCLDFVLFTVVK 296
Query: 127 XXXXXRLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFN 186
+ K + PF PVD + L IP Y N + PMDL TIE++L Y E D N
Sbjct: 297 DAL--KHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDLN 354
Query: 187 LMVSNCIKFNGDKAVISQMARNIQASFEKHMLNMPAKDAP 226
+ NC KFN I M NI+ ++ + MP+++ P
Sbjct: 355 TLFDNCKKFNDRNDDIYIMCENIEGVVQRGLEWMPSEEKP 394
Score = 63.2 bits (152), Expect = 1e-09
Identities = 33/90 (36%), Positives = 49/90 (53%), Gaps = 3/90 (3%)
Query: 288 VLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFE 347
V+K+ L K+S +PF PVD + L P Y + V PMDL T++K+L N Y +E+
Sbjct: 294 VVKDALKHKHS---WPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAI 350
Query: 348 HDVRLVFKNCYAFNPEGTIVNMMGHRLEDV 377
D+ +F NC FN + +M +E V
Sbjct: 351 KDLNTLFDNCKKFNDRNDDIYIMCENIEGV 380
>CE05993 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 1250
Score = 85.5 bits (210), Expect = 2e-16
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 176 ETPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQP-KRTK 234
E+ + DD + V + + D + A + S + ++N K + Q P K+ K
Sbjct: 484 ESVDDNNDDESSKVDSINFDDDDDTATEKDAESRAESVQPEVVNEEPKPSTSQPPSKKRK 543
Query: 235 THPDQPVVIRR----APSNSGRPKREIHPPKTKD-IYPYESNKPKSKKHQME-MKFCQQV 288
+P V + A + P+ E K + + ++ P+ + E KFC ++
Sbjct: 544 AENGEPAVAVKIATPATPVAAHPQEETPRRKNPNTLIEWKHLVPRWQGKIPEWQKFCSKL 603
Query: 289 LKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEH 348
L E+ S K F F PVDP+ L Y + + PMDL T++KKL+ +Y EEF H
Sbjct: 604 LNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVH 663
Query: 349 DVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
D+ L+ NC +NP+G+ + L F +W
Sbjct: 664 DINLMVDNCCKYNPKGSPAHSNALELRSFFEQRW 697
Score = 69.7 bits (169), Expect = 1e-11
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 288 VLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFE 347
V+K+ L K+S +PF PVD + L P Y + V PMDL T++K+L N Y +E+
Sbjct: 294 VVKDALKHKHS---WPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAI 350
Query: 348 HDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRP 386
D+ VF NCY+FNP V M LE S+ P
Sbjct: 351 KDINQVFINCYSFNPPEYDVYKMAKTLEKQVLSQLTQLP 389
Score = 68.9 bits (167), Expect = 2e-11
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A+ F+ PVDP+ L I Y I PMDL TI++KL+ Y PE+ D NLMV NC K+
Sbjct: 616 AQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKY 675
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPP 227
N + A +++ FE+ P P
Sbjct: 676 NPKGSPAHSNALELRSFFEQRWKLFPRPGVDP 707
Score = 64.7 bits (156), Expect = 4e-10
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 8/218 (3%)
Query: 9 LKEAHETGIFDTKPVDAKSEG-QAQPEAESDGASNGGXXXXXXXXXXXXEGEADESIDPA 67
++E E + + D K E + ++ES G+ +G E E ++ A
Sbjct: 181 MEEVEEPIVASEEVPDKKPESVKESTDSESSGSEHG---FEKMDTAEKVEDECNDDEVAA 237
Query: 68 ASATEQEQEQKHELKDESAAADTPKSDMVPAPAPPQ-EPDMNXXXXXXXXXXXXXXXXXX 126
++ TE E E + D +TP+ + V P+ EP
Sbjct: 238 SNGTE-EPEPGDKAADTVNPWETPRQEPVDGVVQPRTEPPAGKPTRHTNCLDFVLFTVVK 296
Query: 127 XXXXXRLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFN 186
+ K + PF PVD + L IP Y N + PMDL TIE++L Y E D N
Sbjct: 297 DAL--KHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDIN 354
Query: 187 LMVSNCIKFNGDKAVISQMARNIQASFEKHMLNMPAKD 224
+ NC FN + + +MA+ ++ + +P D
Sbjct: 355 QVFINCYSFNPPEYDVYKMAKTLEKQVLSQLTQLPRSD 392
>At2g34900 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 400
Score = 85.5 bits (210), Expect = 2e-16
Identities = 78/304 (25%), Positives = 120/304 (38%), Gaps = 37/304 (12%)
Query: 248 SNSGRPKREIHPPKTKDIYPYESNKPKSK-KHQMEMKFCQQVLKELLSKKYSSFNYPFLE 306
SNSG K I P + K KSK KH +Q + +PFLE
Sbjct: 75 SNSGGKKIAISQPNNSK--GNSAGKEKSKGKHVSSPDLMRQFATMFRQIAQHKWAWPFLE 132
Query: 307 PVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTI 366
PVD L Y+ +++PMDLGT++KK+ + EY E DVRLVFKN +N E
Sbjct: 133 PVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKED 192
Query: 367 VNMMGHRLEDVFNSKWADRPVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQITNPAIQ 426
V +M L + F KW ++P ++
Sbjct: 193 VYVMAESLLEKFEEKWL--LIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEMARD--- 247
Query: 427 YLEQQLERMKIELQQLKKQELDRIRKERRAARASMKPXXXXXXXXXXXXXNSKSMGKRRK 486
L +L + ++L++L++ + R R R ++ N K
Sbjct: 248 -LSNELYEIDLQLEKLRESVVQRCRVRNRVFGVVLE-------------INRK------- 286
Query: 487 KNSLKVVVTYDMKRTISERIGDLPEGKLEKAVDIIRKSMPEIGAD-DEVELDIEQLDETT 545
++ K+ +S +G L L KA+ ++ +S P A EVELDI+ + T
Sbjct: 287 -------LSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVT 339
Query: 546 ILTL 549
+ L
Sbjct: 340 LWRL 343
Score = 60.1 bits (144), Expect = 1e-08
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
K A PF +PVD L + Y+ I +PMDL TI++K+ Y ++ D L+ N +
Sbjct: 125 KWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAM 184
Query: 194 KFNGDKAVISQMARNIQASF-EKHMLNMP--AKDAPPQQPKRTKTHPDQPVVIRRAPSNS 250
++N +K + MA ++ F EK +L MP ++ Q + + H ++ + + A +
Sbjct: 185 RYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEM 244
Query: 251 GR 252
R
Sbjct: 245 AR 246
>At3g27260 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 813
Score = 84.0 bits (206), Expect = 7e-16
Identities = 44/101 (43%), Positives = 59/101 (57%), Gaps = 3/101 (2%)
Query: 282 MKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQ 341
MK C +L++L S +S + F PVD V LN P Y +K PMDLGTV+K L + Y
Sbjct: 177 MKQCDTLLRKLWSHPHS---WVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYS 233
Query: 342 TSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
+ EF DVRL F N +NP G V++MG L +F ++W
Sbjct: 234 SPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARW 274
>At5g14270 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 703
Score = 82.8 bits (203), Expect = 2e-15
Identities = 43/101 (42%), Positives = 56/101 (54%), Gaps = 3/101 (2%)
Query: 282 MKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQ 341
MK C+ +LK L+S +Y + F PVD V LN YF+ ++ PMDLGTV+ KL + Y
Sbjct: 138 MKQCEALLKRLMSHQYG---WVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYS 194
Query: 342 TSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
EF DVRL F N +NP G V +M L F +W
Sbjct: 195 CPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRW 235
Score = 58.9 bits (141), Expect = 2e-08
Identities = 35/108 (32%), Positives = 51/108 (46%), Gaps = 3/108 (2%)
Query: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
F+ PVD V LNI YFN I PMDL T++ KL Y P + D L SN + +N
Sbjct: 157 FNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPP 216
Query: 199 KAVISQMARNIQASFEKHMLNMPAKDAPPQ---QPKRTKTHPDQPVVI 243
+ MA ++ FE + K + + +P H ++ +VI
Sbjct: 217 GNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVI 264
>YGR252w [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 439
Score = 81.6 bits (200), Expect = 3e-15
Identities = 46/117 (39%), Positives = 68/117 (57%), Gaps = 8/117 (6%)
Query: 270 SNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLG 329
+ +PK H + Q +L EL + + +PFL+PV+ + P Y+DF+KEPMDL
Sbjct: 324 AQRPKRGPHDAAI---QNILTELQNHAAA---WPFLQPVNKEEV--PDYYDFIKEPMDLS 375
Query: 330 TVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRP 386
T++ KL + +YQ E+F +D RLVF NC +N E T +RLE FN+K + P
Sbjct: 376 TMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKYANRLEKFFNNKVKEIP 432
Score = 53.5 bits (127), Expect = 1e-06
Identities = 28/86 (32%), Positives = 46/86 (52%), Gaps = 2/86 (2%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF +PV+ +P Y+++I PMDLST+E KL + Y+ E D L+ +NC +
Sbjct: 349 AWPFLQPVNKE--EVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMY 406
Query: 196 NGDKAVISQMARNIQASFEKHMLNMP 221
NG+ + A ++ F + +P
Sbjct: 407 NGENTSYYKYANRLEKFFNNKVKEIP 432
>At5g46550 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 506
Score = 78.6 bits (192), Expect = 3e-14
Identities = 44/142 (30%), Positives = 70/142 (48%), Gaps = 7/142 (4%)
Query: 241 VVIRRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSF 300
VV +S + K+ P + ++ P KK +++ + Q L L
Sbjct: 45 VVTEDLSQSSEKSKKRGGPKELDEVQP-------KKKQRLDCDWSSQCLALLRFLMEHRG 97
Query: 301 NYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAF 360
+ F EPVDPV + P YF+ +++PMDLGTV+ KL Y ++EF DVRL F N +
Sbjct: 98 GWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHY 157
Query: 361 NPEGTIVNMMGHRLEDVFNSKW 382
NP V+ + + ++F +W
Sbjct: 158 NPLWNEVHTIAKEINEIFEVRW 179
Score = 57.4 bits (137), Expect = 7e-08
Identities = 28/76 (36%), Positives = 42/76 (54%)
Query: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
F +PVDPV + IP YFN I +PMDL T++ KL + Y ++ D L +N + +N
Sbjct: 101 FKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPL 160
Query: 199 KAVISQMARNIQASFE 214
+ +A+ I FE
Sbjct: 161 WNEVHTIAKEINEIFE 176
>Hs7304921 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1878
Score = 77.4 bits (189), Expect = 6e-14
Identities = 45/142 (31%), Positives = 73/142 (50%), Gaps = 6/142 (4%)
Query: 244 RRAPSNSGRPKREIHPPKTKD-IYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNY 302
RR GR P +++ + P + + + H ++ FC+ +L E+ S + +
Sbjct: 1733 RRRVLLKGRESPAAGPRYSEERLSPSKRRRLSMRNHHSDLTFCEIILMEMESHDAA---W 1789
Query: 303 PFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNP 362
PFLEPV+P ++ Y +K PMD T++++L Y +SEEF D LVF NC FN
Sbjct: 1790 PFLEPVNPRLVS--GYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNE 1847
Query: 363 EGTIVNMMGHRLEDVFNSKWAD 384
+ + V GH + F S+W +
Sbjct: 1848 DDSEVGKAGHIMRRFFESRWEE 1869
>7291557 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 268
Score = 76.3 bits (186), Expect = 1e-13
Identities = 35/112 (31%), Positives = 62/112 (55%)
Query: 272 KPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTV 331
K ++++ E+ C+ ++K L S Y + + F EP+DP L Y + V+EPMDL TV
Sbjct: 4 KQETERSSPEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTV 63
Query: 332 QKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWA 383
+ +LN Y ++ +F D+RL+F N Y + + M +L+ +F ++
Sbjct: 64 RHRLNTGCYLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYS 115
>7302505 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 648
Score = 75.1 bits (183), Expect = 3e-13
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 284 FCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTS 343
F + +L E KKY+ FLEPVD AL PTY+ + PMD+GT+ K++ N Y++
Sbjct: 12 FKKHLLDEARKKKYA---LDFLEPVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSV 68
Query: 344 EEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWADRPVIP 389
E D + + NC+ FN G +V G LE F+ K P P
Sbjct: 69 NEAIADFKQIISNCFLFNRSGDVVYRKGQMLEKFFHKKLRGMPSGP 114
Score = 65.5 bits (158), Expect = 3e-10
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 33/161 (20%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
K A F +PVD AL +P Y+ I RPMD+ TI +++ + Y++ + DF ++SNC
Sbjct: 24 KYALDFLEPVDTEALMVPTYYTVIHRPMDIGTIVKRVQNNYYKSVNEAIADFKQIISNCF 83
Query: 194 KFNGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRP 253
FN V+ + + ++ F K + MP+ P R P GRP
Sbjct: 84 LFNRSGDVVYRKGQMLEKFFHKKLRGMPSGPEVP---------------CNRDPKAVGRP 128
Query: 254 KREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLS 294
+ +N P S Q E K C+++LK+L S
Sbjct: 129 R---------------TNAPSSA--QTERK-CRELLKKLQS 151
>7301208 [BK] KOG1827 Chromatin remodeling complex RSC subunit
RSC1/Polybromo and related proteins
Length = 1654
Score = 74.7 bits (182), Expect = 4e-13
Identities = 64/258 (24%), Positives = 107/258 (40%), Gaps = 27/258 (10%)
Query: 145 PVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF--------- 195
PV P YF I RP+ +S I KL Y +T D LM+ N K
Sbjct: 371 PVRRFHPEYFELIKRPISMSQIHTKLKKGDYANISDLTADLYLMLDNAKKAFPTSHRTHK 430
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPK--RTKTHPDQPVVIRRAPSNSGRP 253
+ K + A+ ++ S E+ ++ +DA + T P+ +R P GRP
Sbjct: 431 DALKMLKLMNAKLVEESLEEGS-DLDDEDAEEMDTEVFTVSTQPE-----KRKP---GRP 481
Query: 254 KREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVD---- 309
+ + P SN PKS + + +++L + K ++ P++
Sbjct: 482 RINSNSNSNASHTPNNSNSPKSNRIAINAAIKKKILS--IQKYLVDYSLGNRRPIEMFME 539
Query: 310 -PVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVN 368
P P Y+D ++ P+D+ T++ + Y E+ D RL+F NC +N EG+ +
Sbjct: 540 KPPRKIYPDYYDIIQNPIDMNTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQYNEEGSNIY 599
Query: 369 MMGHRLEDVFNSKWADRP 386
+ LE N K + P
Sbjct: 600 EDANILERALNEKLKEFP 617
>Hs7304923 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1972
Score = 74.3 bits (181), Expect = 5e-13
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 268 YESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMD 327
+ S K + ++ C +L E+ + + + +PFL PV+ + P Y +K+PMD
Sbjct: 1856 FTSVKKPKRDDSKDLALCSMILTEMETHEDA---WPFLLPVNLKLV--PGYKKVIKKPMD 1910
Query: 328 LGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWAD 384
T+++KL++ +Y E F DVRLVF NC FN + + + GH + F KW D
Sbjct: 1911 FSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTD 1967
Score = 50.8 bits (120), Expect = 6e-06
Identities = 31/82 (37%), Positives = 41/82 (49%), Gaps = 2/82 (2%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
+DA PF PV+ +P Y I +PMD STI KL+ Y E D L+ NC
Sbjct: 1884 EDAWPFLLPVNLKL--VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCE 1941
Query: 194 KFNGDKAVISQMARNIQASFEK 215
FN D + I + N++ FEK
Sbjct: 1942 TFNEDDSDIGRAGHNMRKYFEK 1963
>7291080 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 3275
Score = 73.9 bits (180), Expect = 7e-13
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 252 RPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSF--NYPFLEPVD 309
+PK E P + + P +K KK Q + + L L K Y + PF PVD
Sbjct: 1670 KPKTETKPLVPEPLAPNAGDK--KKKCQFNPEELRTALLPTLEKLYRQEPESVPFRYPVD 1727
Query: 310 PVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNM 369
P AL P YF+ VK+PMDLGT++ + N +Y E+ DV L+F N + +N + + V
Sbjct: 1728 PQALGIPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRKTSRVYR 1787
Query: 370 MGHRLEDVFNSK 381
+L +VF ++
Sbjct: 1788 YCTKLSEVFEAE 1799
Score = 56.2 bits (134), Expect = 2e-07
Identities = 34/125 (27%), Positives = 47/125 (37%)
Query: 90 TPKSDMVPAPAPPQEPDMNXXXXXXXXXXXXXXXXXXXXXXXRLKDAKPFHKPVDPVALN 149
T +VP P P D + ++ PF PVDP AL
Sbjct: 1673 TETKPLVPEPLAPNAGDKKKKCQFNPEELRTALLPTLEKLYRQEPESVPFRYPVDPQALG 1732
Query: 150 IPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQMARNI 209
IP YF + +PMDL TI + Y P + DD LM N +N + + + +
Sbjct: 1733 IPDYFEIVKKPMDLGTIRTNIQNGKYSDPWEYVDDVWLMFDNAWLYNRKTSRVYRYCTKL 1792
Query: 210 QASFE 214
FE
Sbjct: 1793 SEVFE 1797
>At1g73150 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 461
Score = 72.8 bits (177), Expect = 2e-12
Identities = 40/101 (39%), Positives = 55/101 (53%), Gaps = 3/101 (2%)
Query: 282 MKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQ 341
+K C +L +L+ K + F PVD V L Y + +KEPMDLGTV+ +L+ Y+
Sbjct: 120 LKSCNNLLTKLMKHKSG---WIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYK 176
Query: 342 TSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
+ EF DVRL F N +NP G V M L ++F KW
Sbjct: 177 SPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKW 217
Score = 57.0 bits (136), Expect = 9e-08
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 494 VTYDMKRTISERIGDLPEGKLEKAVDIIRKSMPEIG-ADDEVELDIEQLDETTILTLYNT 552
+T+D KR +SE + DLP KLE V II+K PE+ DDE+ELDI+ LD T+ L+
Sbjct: 308 LTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWELFR- 366
Query: 553 FFRKYDTS 560
F +Y S
Sbjct: 367 FVTEYKES 374
Score = 51.2 bits (121), Expect = 5e-06
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
F+ PVD V L + Y N I PMDL T++ +L+ Y++P + +D L +N + +N
Sbjct: 139 FNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPV 198
Query: 199 KAVISQMARNIQASFEKHML------------NMPAKDAPPQQPKRTKTHPDQPVVIRRA 246
+ MA + FE+ + P +D P T TH + + + A
Sbjct: 199 GHDVYHMAEILLNLFEEKWVPLETQYELLIRKQQPVRDIDFHAPVSTNTHNVEALPL-PA 257
Query: 247 PSNSGRPKREIHPPK 261
P+ S P PPK
Sbjct: 258 PTPSLSPP---PPPK 269
>At1g06230 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 766
Score = 72.8 bits (177), Expect = 2e-12
Identities = 37/101 (36%), Positives = 54/101 (52%), Gaps = 3/101 (2%)
Query: 283 KFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQT 342
K C +L+ L+ K+ + F PVD L Y+ ++ PMDLGT++ L Y++
Sbjct: 423 KNCSALLERLMKHKHG---WVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKS 479
Query: 343 SEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWA 383
EF DVRL F N +NPEG V++M L +F +WA
Sbjct: 480 PREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWA 520
>Hs4758056 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2442
Score = 71.6 bits (174), Expect = 4e-12
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 12/205 (5%)
Query: 19 DTKPVDAKSEGQAQPEAESDGASNGGXXXXXXXXXXXXEGEADESIDPAASATE------ 72
D ++ K+E QA+ G S G + E D A +E
Sbjct: 991 DVPVLEMKTETQAEDTEPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPMEVDE 1050
Query: 73 QEQEQKHELKDESAAADTPKSDMVPAPAPPQEPDMNXXXXXXXXXXXXXXXXXXXXXXXR 132
++ E K E+K+E ++ + +P+ P++
Sbjct: 1051 KKPEVKVEVKEEEESSSNGTASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQD----- 1105
Query: 133 LKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNC 192
++ PF +PVDP L IP YF+ + PMDLSTI+RKL+ Y+ P Q DD LM +N
Sbjct: 1106 -PESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNA 1164
Query: 193 IKFNGDKAVISQMARNIQASFEKHM 217
+N + + + + FE+ +
Sbjct: 1165 WLYNRKTSRVYKFCSKLAEVFEQEI 1189
Score = 68.9 bits (167), Expect = 2e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 303 PFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNP 362
PF +PVDP L P YFD VK PMDL T+++KL+ +YQ ++ DV L+F N + +N
Sbjct: 1110 PFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNR 1169
Query: 363 EGTIVNMMGHRLEDVFNSK 381
+ + V +L +VF +
Sbjct: 1170 KTSRVYKFCSKLAEVFEQE 1188
>At5g65630 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 643
Score = 71.6 bits (174), Expect = 4e-12
Identities = 51/155 (32%), Positives = 74/155 (46%), Gaps = 13/155 (8%)
Query: 235 THPDQPVVIRRAPSNSGRPKREIHPPKTKD---------IYPYESNKPKSKKHQMEM-KF 284
T P+ P V +N K ++ P K K + + P+S+K M
Sbjct: 168 TIPEVPAVRSAPLNNFTGEKNDLGPKKKKQKKNVSGLKRSNQFGPSDPESEKLLAGMLNT 227
Query: 285 CQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSE 344
C Q+L +L+ K++ + F PVD V L Y VK+PMDLGTV+ L+ Y +
Sbjct: 228 CSQILVKLMKHKWA---WVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPI 284
Query: 345 EFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFN 379
+F DVRL F N +NP+G V M +L D F+
Sbjct: 285 DFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 319
>Hs4557557 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2414
Score = 70.5 bits (171), Expect = 8e-12
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 274 KSKKHQMEMKFCQQVLKELLSKKYSSF--NYPFLEPVDPVALNCPTYFDFVKEPMDLGTV 331
+SKK + + +Q L L Y + PF +PVDP L P YFD VK PMDL T+
Sbjct: 1043 QSKKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTI 1102
Query: 332 QKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
++KL+ +YQ ++ D+ L+F N + +N + + V +L +VF +
Sbjct: 1103 KRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQE 1152
Score = 68.2 bits (165), Expect = 4e-11
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Query: 57 EGEADESIDPAASATEQEQEQKHELKDESAAADTPKSDMVPAPAPPQEPDMNXXXXXXXX 116
E + ++ + E+ E K E+K+E T + PAP ++
Sbjct: 999 ESKVEDCKMESTETEERSTELKTEIKEEEDQPSTSATQSSPAPGQSKKKIFKPEELRQAL 1058
Query: 117 XXXXXXXXXXXXXXXRLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYE 176
++ PF +PVDP L IP YF+ + PMDLSTI+RKL+ Y+
Sbjct: 1059 MPTLEALYRQD------PESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQ 1112
Query: 177 TPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKHM 217
P Q DD LM +N +N + + + + FE+ +
Sbjct: 1113 EPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEI 1153
>7301065 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 513
Score = 69.3 bits (168), Expect = 2e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 300 FNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYA 359
F+Y F PVD V+L P Y VK PMDL T++K+L+N Y + E D +L+F NC
Sbjct: 59 FSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLL 118
Query: 360 FNPEGTIVNMMGHRLEDVF 378
+N EG+ V G L + F
Sbjct: 119 YNLEGSPVYQAGKLLMEAF 137
Score = 58.5 bits (140), Expect = 3e-08
Identities = 31/116 (26%), Positives = 56/116 (47%)
Query: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
F PVD V+L +P Y + PMDLSTI ++L+ Y + +DF L+ NC+ +N +
Sbjct: 63 FRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYWQASEALEDFKLIFDNCLLYNLE 122
Query: 199 KAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPK 254
+ + Q + + +F M ++ +PK K + +A ++ P+
Sbjct: 123 GSPVYQAGKLLMEAFYMRMESIDLSTEVELKPKSEKRKRKATESLDQASTSFSAPR 178
>Hs20149648 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 707
Score = 68.6 bits (166), Expect = 3e-11
Identities = 62/230 (26%), Positives = 98/230 (41%), Gaps = 16/230 (6%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A F PVD A P+Y + P DLSTI+++L Y + + + N F
Sbjct: 67 ASAFVAPVDLQAY--PMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTF 124
Query: 196 NGDKAVISQMARNIQASFEKHMLNMPAKDAPP---QQPKRTKTHPDQPVVIRRAPSNSGR 252
N + I + A+ + + + + P K+ + + P S R
Sbjct: 125 NEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTR 184
Query: 253 PKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVA 312
KR+ H P+ + N+ +S Q K C+++L + + S PF +PVD
Sbjct: 185 -KRKDHQPRRR-----LRNRAQSYDIQAWKKQCEELLNLIFQCEDSE---PFRQPVD--L 233
Query: 313 LNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNP 362
L P Y D + PMD TV++ L Y++ E DVRL+F N A+ P
Sbjct: 234 LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTP 283
Score = 51.2 bits (121), Expect = 5e-06
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
+D++PF +PVD L P Y + I PMD +T+ L YE+P ++ D L+ SN
Sbjct: 222 EDSEPFRQPVD--LLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSK 279
Query: 194 KFNGDK-AVISQMARNIQASFEKHMLNMPAKDAPPQQ-------PKRTKTHPDQPVVIRR 245
+ K + I M+ + A FE+H+ ++ + + KR K V
Sbjct: 280 AYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKRRKKRNRSSSVSSS 339
Query: 246 APSNSGRPKREIHP 259
A S+ R KR + P
Sbjct: 340 AASSPERKKRILKP 353
>At1g17790 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 487
Score = 68.6 bits (166), Expect = 3e-11
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 283 KFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQT 342
K C +L +L+ K + + F PVD L Y + VKEPMDLGTV+ KL Y++
Sbjct: 134 KNCNSLLTKLMKHKSA---WVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKS 190
Query: 343 SEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
+F DVRL F N +NP G V L ++F KW
Sbjct: 191 PLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKW 230
Score = 57.4 bits (137), Expect = 7e-08
Identities = 30/58 (51%), Positives = 39/58 (66%), Gaps = 1/58 (1%)
Query: 494 VTYDMKRTISERIGDLPEGKLEKAVDIIRKSMPEIG-ADDEVELDIEQLDETTILTLY 550
+T + KR +SE + DLP KLE V II+KS PE+ DDE+ELDI+ LD T+ LY
Sbjct: 330 LTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
>Hs13899209 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 1484
Score = 68.2 bits (165), Expect = 4e-11
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 301 NYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAF 360
++PFLEPVD P Y+ +K PMD+ +++KKLN Y T EEF +D++ +F+NC +
Sbjct: 456 SWPFLEPVDESY--APNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCRKY 513
Query: 361 NPEGTIVNMMGHRLEDVFN 379
N E + M LE F+
Sbjct: 514 NGESSEYTKMSDNLERCFH 532
Score = 65.9 bits (159), Expect = 2e-10
Identities = 34/92 (36%), Positives = 55/92 (58%), Gaps = 3/92 (3%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
KD+ PF +PVD P Y+ I PMD+S++E+KLN Y T E+ +D M NC
Sbjct: 454 KDSWPFLEPVDESYA--PNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDMKTMFRNCR 511
Query: 194 KFNGDKAVISQMARNIQASFEKHML-NMPAKD 224
K+NG+ + ++M+ N++ F + M+ + P +D
Sbjct: 512 KYNGESSEYTKMSDNLERCFHRAMMKHFPGED 543
>At1g20670 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 652
Score = 67.8 bits (164), Expect = 5e-11
Identities = 44/126 (34%), Positives = 64/126 (49%), Gaps = 8/126 (6%)
Query: 139 FHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGD 198
+ PVDP L P YF I PMD ST+ KL+ AY T EQ D L+ +N +++N
Sbjct: 196 YSDPVDPEEL--PDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSA 253
Query: 199 KAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKREIH 258
V + AR IQ +K N+ +D+ ++P+ + QP V RR GRP ++
Sbjct: 254 DTVYYRQARAIQELAKKDFENL-RQDSDDEEPQSQQQQQQQPKVARR-----GRPPKKHP 307
Query: 259 PPKTKD 264
P + D
Sbjct: 308 EPSSID 313
Score = 57.0 bits (136), Expect = 9e-08
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 304 FLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPE 363
+ +PVDP L P YF+ +K PMD T++ KL++ Y T E+FE DV L+ N +N
Sbjct: 196 YSDPVDPEEL--PDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSA 253
Query: 364 GTIVNMMGHRLEDV 377
T+ ++++
Sbjct: 254 DTVYYRQARAIQEL 267
>CE18461 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1430
Score = 67.4 bits (163), Expect = 7e-11
Identities = 36/103 (34%), Positives = 56/103 (53%), Gaps = 5/103 (4%)
Query: 280 MEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWE 339
M + CQ +L EL+ + + PFLEPV+P + P Y + +PMDL T+++K
Sbjct: 1263 MNKELCQLMLDELVVQANA---LPFLEPVNPKLV--PGYKMIISKPMDLKTIRQKNEKLI 1317
Query: 340 YQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKW 382
Y+T E+F D+ L+F NC FN + + + G L F +W
Sbjct: 1318 YETPEDFAEDIELMFANCRQFNIDHSEIGRAGISLHKFFQKRW 1360
Score = 58.9 bits (141), Expect = 2e-08
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 135 DAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIK 194
+A PF +PV+P +P Y I +PMDL TI +K YETPE +D LM +NC +
Sbjct: 1280 NALPFLEPVNPKL--VPGYKMIISKPMDLKTIRQKNEKLIYETPEDFAEDIELMFANCRQ 1337
Query: 195 FNGDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRR 245
FN D + I + ++ F+K + + + HP Q ++ R
Sbjct: 1338 FNIDHSEIGRAGISLHKFFQKRWKQLKYNFT----KRLRRLHPKQYPILHR 1384
>CE28069 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2045
Score = 66.6 bits (161), Expect = 1e-10
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 164 STIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKHMLNMPAK 223
ST+ L +Q TD + I F G + S A + +K +
Sbjct: 758 STVSAMLQPKTEPMDDQNTDSLSSRPPTAIGFGGSSS--STPAPIMNGIVKKEEDPEESS 815
Query: 224 DAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMK 283
+ P K TK + + + KRE PP T+D + + +K
Sbjct: 816 NQAPPSVKDTKDG------VAESKPKEQQAKREPTPPPTEDTVFSQEDL---------IK 860
Query: 284 FCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTS 343
F V ++L + ++ PF PVD LN P Y + +K PMDL TV KKL +YQ +
Sbjct: 861 FLLPVWEKLDKSEDAA---PFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNA 917
Query: 344 EEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
+F D+ L+ N + +N + + V G +L ++F S+
Sbjct: 918 GQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEMFVSE 955
Score = 58.9 bits (141), Expect = 2e-08
Identities = 31/84 (36%), Positives = 41/84 (47%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
+DA PF PVD LNIP Y I RPMDL T+ +KL Y+ Q DD LM+ N
Sbjct: 873 EDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAW 932
Query: 194 KFNGDKAVISQMARNIQASFEKHM 217
+N + + + + F M
Sbjct: 933 LYNRKNSKVYKYGLKLSEMFVSEM 956
>CE21117 [K] KOG1778 CREB binding protein/P300 and related TAZ Zn-finger
proteins
Length = 2056
Score = 66.6 bits (161), Expect = 1e-10
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 164 STIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKHMLNMPAK 223
ST+ L +Q TD + I F G + S A + +K +
Sbjct: 769 STVSAMLQPKTEPMDDQNTDSLSSRPPTAIGFGGSSS--STPAPIMNGIVKKEEDPEESS 826
Query: 224 DAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMK 283
+ P K TK + + + KRE PP T+D + + +K
Sbjct: 827 NQAPPSVKDTKDG------VAESKPKEQQAKREPTPPPTEDTVFSQEDL---------IK 871
Query: 284 FCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTS 343
F V ++L + ++ PF PVD LN P Y + +K PMDL TV KKL +YQ +
Sbjct: 872 FLLPVWEKLDKSEDAA---PFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNA 928
Query: 344 EEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
+F D+ L+ N + +N + + V G +L ++F S+
Sbjct: 929 GQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEMFVSE 966
Score = 58.9 bits (141), Expect = 2e-08
Identities = 31/84 (36%), Positives = 41/84 (47%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
+DA PF PVD LNIP Y I RPMDL T+ +KL Y+ Q DD LM+ N
Sbjct: 884 EDAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAW 943
Query: 194 KFNGDKAVISQMARNIQASFEKHM 217
+N + + + + F M
Sbjct: 944 LYNRKNSKVYKYGLKLSEMFVSEM 967
>Hs7304919 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1674
Score = 65.5 bits (158), Expect = 3e-10
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 281 EMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEY 340
E+ +Q++ EL+ S +PFL+ V + + P Y+D +K+P+ L +++K+N EY
Sbjct: 1552 ELSAFEQLVVELVRHDDS---WPFLKLVSKIQV--PDYYDIIKKPIALNIIREKVNKCEY 1606
Query: 341 QTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFN 379
+ + EF D+ L+F NC+ +NP T G RL+ F+
Sbjct: 1607 KLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRLQAFFH 1645
>Hs16445438 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2269
Score = 65.5 bits (158), Expect = 3e-10
Identities = 69/255 (27%), Positives = 106/255 (41%), Gaps = 31/255 (12%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A F PVD P Y + P DL TI +L Y + + + N F
Sbjct: 1182 AAAFAGPVD--LCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTF 1239
Query: 196 NGDKAVISQMARNIQASFEK-----HMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNS 250
N ++VI++ A+ I K H N+ + ++ D + + ++S
Sbjct: 1240 NEPESVIARSAKKITDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPK---TSS 1296
Query: 251 GRPKREIHPPKT--KDIYPYESNKPKSKKHQMEMKF-CQQVLKELLSKKYSSFNYPFLEP 307
GR R +H K + ESN K K + + F C+ + PF +P
Sbjct: 1297 GR--RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCED-------------SEPFRQP 1341
Query: 308 VDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNP-EGTI 366
VD V P Y D + PMD GTV++ L+ Y + EF D+RL+F N A+ P + +
Sbjct: 1342 VDLVEY--PDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSK 1399
Query: 367 VNMMGHRLEDVFNSK 381
+ M RL +F K
Sbjct: 1400 IYSMTLRLSALFEEK 1414
>Hs16445436 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2320
Score = 65.5 bits (158), Expect = 3e-10
Identities = 69/255 (27%), Positives = 106/255 (41%), Gaps = 31/255 (12%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A F PVD P Y + P DL TI +L Y + + + N F
Sbjct: 1182 AAAFAGPVD--LCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTF 1239
Query: 196 NGDKAVISQMARNIQASFEK-----HMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNS 250
N ++VI++ A+ I K H N+ + ++ D + + ++S
Sbjct: 1240 NEPESVIARSAKKITDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPK---TSS 1296
Query: 251 GRPKREIHPPKT--KDIYPYESNKPKSKKHQMEMKF-CQQVLKELLSKKYSSFNYPFLEP 307
GR R +H K + ESN K K + + F C+ + PF +P
Sbjct: 1297 GR--RRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCED-------------SEPFRQP 1341
Query: 308 VDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNP-EGTI 366
VD V P Y D + PMD GTV++ L+ Y + EF D+RL+F N A+ P + +
Sbjct: 1342 VDLVEY--PDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSK 1399
Query: 367 VNMMGHRLEDVFNSK 381
+ M RL +F K
Sbjct: 1400 IYSMTLRLSALFEEK 1414
>ECU10g1430 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 396
Score = 65.1 bits (157), Expect = 3e-10
Identities = 36/103 (34%), Positives = 54/103 (51%), Gaps = 5/103 (4%)
Query: 279 QMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNW 338
+++ +F ++ +L S ++ +PFL PVDP + P Y+ + +PMDL T+ KL N
Sbjct: 281 RLQARFISYLISDLQSNAHA---WPFLRPVDPAEV--PDYYKCIAKPMDLSTMVLKLRNN 335
Query: 339 EYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
EY E F DV L+ NC+ +N T L D FN K
Sbjct: 336 EYGCIEAFVADVHLMVNNCFEYNGRDTQYYKCAQALLDHFNKK 378
Score = 56.2 bits (134), Expect = 2e-07
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 136 AKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKF 195
A PF +PVDP +P Y+ I +PMDLST+ KL + Y E D +LMV+NC ++
Sbjct: 300 AWPFLRPVDPA--EVPDYYKCIAKPMDLSTMVLKLRNNEYGCIEAFVADVHLMVNNCFEY 357
Query: 196 NGDKAVISQMARNIQASFEKHM 217
NG + A+ + F K +
Sbjct: 358 NGRDTQYYKCAQALLDHFNKKL 379
>Hs14971411 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1110
Score = 64.3 bits (155), Expect = 6e-10
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 280 MEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKL---N 336
++ + C+++L L + S +E +PV + P Y+ +K+PMDL TV+KKL +
Sbjct: 961 VDQRKCERLLLYLYCHELS------IEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKH 1014
Query: 337 NWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRL----EDVFNSKWADRPVIP 389
+ YQ ++F DVRL+FKNC FN + V G + ED ++DR P
Sbjct: 1015 SQHYQIPDDFVADVRLIFKNCERFNEADSEVAQAGKAVALYFEDKLTEIYSDRTFAP 1071
Score = 52.4 bits (124), Expect = 2e-06
Identities = 25/74 (33%), Positives = 42/74 (55%), Gaps = 3/74 (4%)
Query: 144 DPVALNIPLYFNYIPRPMDLSTIERKL---NLDAYETPEQVTDDFNLMVSNCIKFNGDKA 200
+PV +IP Y+ I +PMDLST+++KL + Y+ P+ D L+ NC +FN +
Sbjct: 984 EPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEADS 1043
Query: 201 VISQMARNIQASFE 214
++Q + + FE
Sbjct: 1044 EVAQAGKAVALYFE 1057
>CE24921 [R] KOG1632 Uncharacterized PHD Zn-finger protein
Length = 451
Score = 63.9 bits (154), Expect = 7e-10
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 287 QVLKELLSKKYSSFNYPFLEPVDPVALN-CPTYFDFVKEPMDLGTVQKKLNNWEYQTSEE 345
++L+ LL + S+ PF PVD LN P Y F+K+PMDL T+ KK+ EY +
Sbjct: 298 ELLELLLEHRMST---PFRNPVD---LNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQ 351
Query: 346 FEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWAD 384
F +DV +F+N +NP+G V +++VF+ K D
Sbjct: 352 FVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLID 390
Score = 50.4 bits (119), Expect = 8e-06
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 138 PFHKPVDPVALN-IPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFN 196
PF PVD LN P Y +I +PMDLSTI +K+ Y Q +D N M N +N
Sbjct: 311 PFRNPVD---LNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKTYN 367
Query: 197 GDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKRE 256
+ + A +Q F+K ++++ + QQ T Q P +S R + +
Sbjct: 368 PKGNAVFKCAETMQEVFDKKLIDVREQMTARQQMLLLATAQQQD------PMSSIRKRVQ 421
Query: 257 IHPPKTKDIYPYESNK 272
+T D +S++
Sbjct: 422 SESQRTVDSLDIDSDQ 437
>CE15910 [R] KOG1632 Uncharacterized PHD Zn-finger protein
Length = 510
Score = 63.9 bits (154), Expect = 7e-10
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 287 QVLKELLSKKYSSFNYPFLEPVDPVALN-CPTYFDFVKEPMDLGTVQKKLNNWEYQTSEE 345
++L+ LL + S+ PF PVD LN P Y F+K+PMDL T+ KK+ EY +
Sbjct: 357 ELLELLLEHRMST---PFRNPVD---LNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQ 410
Query: 346 FEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWAD 384
F +DV +F+N +NP+G V +++VF+ K D
Sbjct: 411 FVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLID 449
Score = 50.4 bits (119), Expect = 8e-06
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 138 PFHKPVDPVALN-IPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFN 196
PF PVD LN P Y +I +PMDLSTI +K+ Y Q +D N M N +N
Sbjct: 370 PFRNPVD---LNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKTYN 426
Query: 197 GDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKRE 256
+ + A +Q F+K ++++ + QQ T Q P +S R + +
Sbjct: 427 PKGNAVFKCAETMQEVFDKKLIDVREQMTARQQMLLLATAQQQD------PMSSIRKRVQ 480
Query: 257 IHPPKTKDIYPYESNK 272
+T D +S++
Sbjct: 481 SESQRTVDSLDIDSDQ 496
>CE15909 [R] KOG1632 Uncharacterized PHD Zn-finger protein
Length = 405
Score = 63.9 bits (154), Expect = 7e-10
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 287 QVLKELLSKKYSSFNYPFLEPVDPVALN-CPTYFDFVKEPMDLGTVQKKLNNWEYQTSEE 345
++L+ LL + S+ PF PVD LN P Y F+K+PMDL T+ KK+ EY +
Sbjct: 252 ELLELLLEHRMST---PFRNPVD---LNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQ 305
Query: 346 FEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWAD 384
F +DV +F+N +NP+G V +++VF+ K D
Sbjct: 306 FVNDVNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLID 344
Score = 50.4 bits (119), Expect = 8e-06
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 138 PFHKPVDPVALN-IPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFN 196
PF PVD LN P Y +I +PMDLSTI +K+ Y Q +D N M N +N
Sbjct: 265 PFRNPVD---LNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVNDVNQMFENAKTYN 321
Query: 197 GDKAVISQMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRPKRE 256
+ + A +Q F+K ++++ + QQ T Q P +S R + +
Sbjct: 322 PKGNAVFKCAETMQEVFDKKLIDVREQMTARQQMLLLATAQQQD------PMSSIRKRVQ 375
Query: 257 IHPPKTKDIYPYESNK 272
+T D +S++
Sbjct: 376 SESQRTVDSLDIDSDQ 391
>At1g58025 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 769
Score = 63.5 bits (153), Expect = 1e-09
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 270 SNKPKSKKHQMEMKFCQQVLKE--LLSKKYSSFNY--PFLEPVDPVALNCPTYFDFVKEP 325
S + + KK +++ +Q L++ ++ KK PF PV+P AL P YFD +K P
Sbjct: 197 SLQKEEKKTDQNLRYNKQELEDSLIVIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTP 256
Query: 326 MDLGTVQKKLNNWE----YQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
MD GT+ NN+E Y SE+ DV ++ NC +N +G + + R++ F
Sbjct: 257 MDFGTI---CNNFEKGNKYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKY 313
Query: 382 W 382
W
Sbjct: 314 W 314
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/86 (34%), Positives = 46/86 (52%), Gaps = 1/86 (1%)
Query: 132 RLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNL-DAYETPEQVTDDFNLMVS 190
+++ A PF+ PV+P AL IP YF+ I PMD TI + Y E V D N + +
Sbjct: 228 KMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVYKDVNYIWN 287
Query: 191 NCIKFNGDKAVISQMARNIQASFEKH 216
NC K+N I + + ++ +F K+
Sbjct: 288 NCSKYNKKGDYIVDLMKRVKKNFMKY 313
>Hs20555413 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1205
Score = 63.2 bits (152), Expect = 1e-09
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 133 LKDAKPFHKPVDPVALN-IPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSN 191
L++ P H +PV L+ +P Y +I +PMD ST+ RKL Y T E+ +DFNL+V+N
Sbjct: 605 LQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTN 664
Query: 192 CIKFNGDKAVISQMA 206
C+K+N + + A
Sbjct: 665 CMKYNAKDTIFHRAA 679
Score = 60.5 bits (145), Expect = 8e-09
Identities = 29/74 (39%), Positives = 43/74 (57%), Gaps = 2/74 (2%)
Query: 304 FLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPE 363
F EPV+ P Y +F+ +PMD T+++KL + Y+T EEFE D L+ NC +N +
Sbjct: 614 FAEPVN--LSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAK 671
Query: 364 GTIVNMMGHRLEDV 377
TI + RL D+
Sbjct: 672 DTIFHRAAVRLRDL 685
>SPAC1952.05 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 454
Score = 62.8 bits (151), Expect = 2e-09
Identities = 28/81 (34%), Positives = 47/81 (57%), Gaps = 2/81 (2%)
Query: 301 NYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAF 360
++PF++PV + P Y++ ++ PMDL T++ +L N +Y++ EEF D + +F NC ++
Sbjct: 365 SWPFMQPVSKE--DVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSY 422
Query: 361 NPEGTIVNMMGHRLEDVFNSK 381
N T RLE F K
Sbjct: 423 NDSNTTYYKNADRLEKFFQKK 443
>7304241 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1430
Score = 62.4 bits (150), Expect = 2e-09
Identities = 31/73 (42%), Positives = 44/73 (59%), Gaps = 2/73 (2%)
Query: 304 FLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPE 363
F EPVD + P Y D VK+PMDLGT++ KL +Y + E+ E D L+ +NC A+N +
Sbjct: 636 FREPVDTSEV--PDYTDIVKQPMDLGTMRAKLKECQYNSLEQLEADFDLMIQNCLAYNNK 693
Query: 364 GTIVNMMGHRLED 376
T+ G R+ D
Sbjct: 694 DTVFYRAGIRMRD 706
>7302099 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1476
Score = 62.4 bits (150), Expect = 2e-09
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 288 VLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFE 347
+L++++ K + +PFL PV + P Y +K PMDL ++ KLN YQ +EE
Sbjct: 1368 LLEQIMKHKAA---WPFLRPV--LTSEVPDYHQIIKTPMDLAKIKSKLNMGAYQLNEELL 1422
Query: 348 HDVRLVFKNCYAFNPEGTIVNMMGHRLE 375
D++LVF+NC +N EG + G +LE
Sbjct: 1423 SDIQLVFRNCDLYNVEGNEIYDAGCQLE 1450
>7295327 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 3080
Score = 62.0 bits (149), Expect = 3e-09
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 134 KDAKPFHKPVDPVALNI-PLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNC 192
+DA PF VDPV +I P Y++ I RPMDL +E KL+ Y + +DF L+V+NC
Sbjct: 765 RDAWPF---VDPVEEDIAPRYYSIIRRPMDLLKMEDKLDSGEYHKFSEFRNDFRLIVNNC 821
Query: 193 IKFNGDKAVISQMARNIQASFEK 215
+NG ++M N+Q +FEK
Sbjct: 822 RLYNGHNNEYTEMVNNLQDAFEK 844
Score = 56.6 bits (135), Expect = 1e-07
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 15/174 (8%)
Query: 302 YPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFN 361
+PF++PV+ P Y+ ++ PMDL ++ KL++ EY EF +D RL+ NC +N
Sbjct: 768 WPFVDPVEEDI--APRYYSIIRRPMDLLKMEDKLDSGEYHKFSEFRNDFRLIVNNCRLYN 825
Query: 362 PEGTIVNMMGHRLEDVF---NSKWADRPVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 418
M + L+D F K+ D
Sbjct: 826 GHNNEYTEMVNNLQDAFEKATKKYFDNLSDDEDDDPNLSYPAADSKMNVFREKYFSKKAK 885
Query: 419 QIT------NPAIQYLEQQLERMKIE----LQQLKKQELDRIRKERRAARASMK 462
+ T PA+ E+ L ++ E Q+ K++E D+ RK++ ++A ++
Sbjct: 886 EETEKDAPGRPAVSSAEEDLSEIEAEAPQKAQKRKRKEKDKRRKKKTKSKADVE 939
>YBR081c [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 1332
Score = 61.2 bits (147), Expect = 5e-09
Identities = 29/79 (36%), Positives = 47/79 (58%), Gaps = 4/79 (5%)
Query: 285 CQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSE 344
C++V+ EL + Y+ + PFL V P Y +K+ MDL TV KKL +++Y + +
Sbjct: 449 CEKVVLEL--RNYTEHSTPFLNKVSK--REAPNYHQIIKKSMDLNTVLKKLKSFQYDSKQ 504
Query: 345 EFEHDVRLVFKNCYAFNPE 363
EF D+ L++KNC +N +
Sbjct: 505 EFVDDIMLIWKNCLTYNSD 523
>Hs14971413 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1127
Score = 60.8 bits (146), Expect = 6e-09
Identities = 33/93 (35%), Positives = 54/93 (57%), Gaps = 9/93 (9%)
Query: 280 MEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKL---N 336
++ + C+++L L + S +E +PV + P Y+ +K+PMDL TV+KKL +
Sbjct: 961 VDQRKCERLLLYLYCHELS------IEFQEPVPASIPNYYKIIKKPMDLSTVKKKLQKKH 1014
Query: 337 NWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNM 369
+ YQ ++F DVRL+FKNC FN +V +
Sbjct: 1015 SQHYQIPDDFVADVRLIFKNCERFNEMMKVVQV 1047
>CE05310 [BK] KOG1827 Chromatin remodeling complex RSC subunit
RSC1/Polybromo and related proteins
Length = 1879
Score = 60.5 bits (145), Expect = 8e-09
Identities = 55/235 (23%), Positives = 104/235 (43%), Gaps = 24/235 (10%)
Query: 145 PVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVIS- 203
P A P Y+ I P+D+ TI +++ Y + + +D +M SN FN +++I
Sbjct: 564 PSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRSMIHM 623
Query: 204 ---QMARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSN-SGRPKREIHP 259
Q+ + + ++E M N + P P + ++ + + ++ S GR K+
Sbjct: 624 DAIQLEKAVLRAYEG-MRNTSLGSSIPSTPHSSSSNLMKAMKLKTPKSEVRGRGKKNFSG 682
Query: 260 PKTKDIYPYESNKPKSKKHQMEMKFCQQVL---KELLSKKYSSFNYPFLEPVD-PVALNC 315
+ ES + ++HQ M+ L ++ + + + S E + P+A+N
Sbjct: 683 SDDE-----ESARINIQQHQRSMEDAIMQLPIEEQKMWRLFKSMKDVREEGTNRPLAVNF 737
Query: 316 ---------PTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFN 361
P Y+D +K+PMD+ ++ KL N +Y T + D L+ N FN
Sbjct: 738 MRLPSKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFN 792
>SPBC25H2.11c [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 979
Score = 60.1 bits (144), Expect = 1e-08
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 286 QQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEE 345
++V+ EL S Y+ + FL V + P Y+ +KEPMDLGT+ + L N Y + +E
Sbjct: 308 EKVVLELRS--YTEHSLAFLTKVSK--RDAPDYYTVIKEPMDLGTILRNLKNLHYNSKKE 363
Query: 346 FEHDVRLVFKNCYAFN 361
F HD+ L++ NC+ +N
Sbjct: 364 FVHDLMLIWSNCFLYN 379
>Hs17449320 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1050
Score = 60.1 bits (144), Expect = 1e-08
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 255 REIHPPKTK---DIYPYESNKPKS----KKHQMEMKFCQQVLKELLSKKYSSFNYPFLEP 307
R++ P+ + D + S K K+ K ++ + C+++L L + S L
Sbjct: 871 RDLSKPEVEYDCDAPSHNSEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMS------LAF 924
Query: 308 VDPVALNCPTYFDFVKEPMDLGTVQKKLNN--WEYQTSEEFEHDVRLVFKNCYAFNPEGT 365
DPV L P Y+ +K PMDL T++K+L Y E+F D RL+F+NC FN +
Sbjct: 925 QDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDS 984
Query: 366 IVNMMGHRLEDVF 378
V G +LE+ F
Sbjct: 985 EVANAGIKLENYF 997
Score = 59.7 bits (143), Expect = 1e-08
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 144 DPVALNIPLYFNYIPRPMDLSTIERKLNLD--AYETPEQVTDDFNLMVSNCIKFNGDKAV 201
DPV L +P Y+ I PMDLSTI+++L D Y PE DF L+ NC +FN +
Sbjct: 926 DPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDSE 985
Query: 202 ISQMARNIQASFEKHMLNM-PAKDAP 226
++ ++ FE+ + N+ P K P
Sbjct: 986 VANAGIKLENYFEELLKNLYPEKRFP 1011
>Hs14971415 [O] KOG2177 Predicted E3 ubiquitin ligase
Length = 1015
Score = 60.1 bits (144), Expect = 1e-08
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 255 REIHPPKTK---DIYPYESNKPKS----KKHQMEMKFCQQVLKELLSKKYSSFNYPFLEP 307
R++ P+ + D + S K K+ K ++ + C+++L L + S L
Sbjct: 836 RDLSKPEVEYDCDAPSHNSEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMS------LAF 889
Query: 308 VDPVALNCPTYFDFVKEPMDLGTVQKKLNN--WEYQTSEEFEHDVRLVFKNCYAFNPEGT 365
DPV L P Y+ +K PMDL T++K+L Y E+F D RL+F+NC FN +
Sbjct: 890 QDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDS 949
Query: 366 IVNMMGHRLEDVF 378
V G +LE+ F
Sbjct: 950 EVANAGIKLENYF 962
Score = 59.7 bits (143), Expect = 1e-08
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 144 DPVALNIPLYFNYIPRPMDLSTIERKLNLD--AYETPEQVTDDFNLMVSNCIKFNGDKAV 201
DPV L +P Y+ I PMDLSTI+++L D Y PE DF L+ NC +FN +
Sbjct: 891 DPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDSE 950
Query: 202 ISQMARNIQASFEKHMLNM-PAKDAP 226
++ ++ FE+ + N+ P K P
Sbjct: 951 VANAGIKLENYFEELLKNLYPEKRFP 976
>Hs14670392 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1483
Score = 58.9 bits (141), Expect = 2e-08
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 234 KTHPDQPVVIRRAPSNSGRPKREIHP-----PKTKDIYPYE------SNKPKSKKHQMEM 282
KT + VI A + RP ++ H PK + E K S++ +E+
Sbjct: 1286 KTIRGKHSVIPPAARSGRRPGKKPHSTRRSQPKAPPVDDAEVDELVLQTKRSSRRQSLEL 1345
Query: 283 KFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQT 342
+ C+++L +++ ++S +PF EPV Y+D + PMD TVQ K + Y++
Sbjct: 1346 QKCEEILHKIVKYRFS---WPFREPV--TRDEAEDYYDVITHPMDFQTVQNKCSCGSYRS 1400
Query: 343 SEEFEHDVRLVFKNCYAFNPEGTIV 367
+EF D++ VF N +N G+ V
Sbjct: 1401 VQEFLTDMKQVFTNAEVYNCRGSHV 1425
>At5g55040 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 145
Score = 58.9 bits (141), Expect = 2e-08
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 304 FLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPE 363
+ EPVDP L P Y D ++ PMD TV+KKL N Y T EE E DV L+ N +N
Sbjct: 67 YAEPVDPEEL--PDYHDMIEHPMDFSTVRKKLANGSYSTLEELESDVLLICSNAMQYNSS 124
Query: 364 GTI 366
T+
Sbjct: 125 DTV 127
>7294564 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 813
Score = 58.9 bits (141), Expect = 2e-08
Identities = 37/115 (32%), Positives = 53/115 (45%), Gaps = 3/115 (2%)
Query: 267 PYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPM 326
P S++P + E K L S + + +PFL PV A P Y+D +K PM
Sbjct: 693 PARSSRPLEESTDPE-KLATSFASVLQSVRQHTTAWPFLRPV--TAAEVPDYYDHIKYPM 749
Query: 327 DLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
DL T+ ++L YQT F D+ +F NC +N T + LE F +K
Sbjct: 750 DLKTMGERLKKGYYQTRRLFMADMARIFSNCRFYNSPDTEYYRCANSLERYFQTK 804
>Hs20357588_1 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1689
Score = 58.9 bits (141), Expect = 2e-08
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 135 DAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIK 194
D+ PFH PV+ +P Y+ I PMDL TI + ++ Y++ E DD NL+++N +K
Sbjct: 1524 DSWPFHHPVNKKF--VPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVK 1581
Query: 195 FNGDKAVISQMARNI-------QASFEKHMLNM-----PAKDAPPQQPKRTKTHPDQPVV 242
+NG ++ ++ A+ I +++H+ + AK+A ++ + P P
Sbjct: 1582 YNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGP 1641
Query: 243 IRRAPSNSGRPKREIHPPKTKDIYPYESN 271
P + + + ++ ESN
Sbjct: 1642 YTPQPPDLYDTNTSLSMSRDASVFQDESN 1670
>Hs20357585_1 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1710
Score = 58.9 bits (141), Expect = 2e-08
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 135 DAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIK 194
D+ PFH PV+ +P Y+ I PMDL TI + ++ Y++ E DD NL+++N +K
Sbjct: 1545 DSWPFHHPVNKKF--VPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVK 1602
Query: 195 FNGDKAVISQMARNI-------QASFEKHMLNM-----PAKDAPPQQPKRTKTHPDQPVV 242
+NG ++ ++ A+ I +++H+ + AK+A ++ + P P
Sbjct: 1603 YNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGP 1662
Query: 243 IRRAPSNSGRPKREIHPPKTKDIYPYESN 271
P + + + ++ ESN
Sbjct: 1663 YTPQPPDLYDTNTSLSMSRDASVFQDESN 1691
>Hs14670390 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1483
Score = 57.8 bits (138), Expect = 5e-08
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 234 KTHPDQPVVIRRAPSNSGRPKREIHP-----PKTKDIYPYE------SNKPKSKKHQMEM 282
KT + VI A + RP ++ H PK + E K S++ +E+
Sbjct: 1286 KTIRGKHSVIPPAARSGRRPGKKPHSTRRSQPKAPPVDDAEVDELVLQTKRSSRRQSLEL 1345
Query: 283 KFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQT 342
+ C+++L ++ ++S +PF EPV Y+D + PMD TVQ K + Y++
Sbjct: 1346 QKCEEILHMIVKYRFS---WPFREPV--TRDEAEDYYDVITHPMDFQTVQNKCSCGSYRS 1400
Query: 343 SEEFEHDVRLVFKNCYAFNPEGTIV 367
+EF D++ VF N +N G+ V
Sbjct: 1401 VQEFLTDMKQVFTNAEVYNCRGSHV 1425
>CE24372 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 767
Score = 57.8 bits (138), Expect = 5e-08
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 288 VLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFE 347
+LK+L + K + +PF PVD P Y+D +K P+D T+Q+KL Y F
Sbjct: 658 ILKKLTADKNA---WPFASPVD--VKEVPEYYDHIKHPIDFKTMQEKLKRKAYTHQHLFI 712
Query: 348 HDVRLVFKNCYAFNPEGTIVNMMGHRLEDV 377
D+ +F+NCY FN + G++L ++
Sbjct: 713 ADLNRLFQNCYVFNGAEAVYYKYGYKLNEL 742
Score = 50.8 bits (120), Expect = 6e-06
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCI 193
K+A PF PVD +P Y+++I P+D T++ KL AY D N + NC
Sbjct: 666 KNAWPFASPVD--VKEVPEYYDHIKHPIDFKTMQEKLKRKAYTHQHLFIADLNRLFQNCY 723
Query: 194 KFNGDKAV 201
FNG +AV
Sbjct: 724 VFNGAEAV 731
>CE27187 [B] KOG1245 Chromatin remodeling complex WSTF-ISWI large subunit
(contains heterochromatin localization PHD and BROMO
domains)
Length = 1427
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/107 (30%), Positives = 56/107 (51%), Gaps = 13/107 (12%)
Query: 281 EMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEY 340
+M + +LKE + ++ S +PFL+PVD + P Y+D +K PM+L T+ K+ Y
Sbjct: 1325 KMTLIETLLKEAMRQECS---WPFLQPVD--SKEVPDYYDVIKRPMNLRTMMNKIKQRIY 1379
Query: 341 QTSEEFEHDVRLVFKNCYAFN-PEGTIVNM-------MGHRLEDVFN 379
E +D +L+ NC +N PE I + M RL+++ +
Sbjct: 1380 NKPIEVRNDFQLILSNCETYNEPENEIYKLSRELHDFMADRLDEIID 1426
Score = 52.8 bits (125), Expect = 2e-06
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 138 PFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNG 197
PF +PVD + +P Y++ I RPM+L T+ K+ Y P +V +DF L++SNC +N
Sbjct: 1344 PFLQPVD--SKEVPDYYDVIKRPMNLRTMMNKIKQRIYNKPIEVRNDFQLILSNCETYNE 1401
Query: 198 DKAVISQMARNI 209
+ I +++R +
Sbjct: 1402 PENEIYKLSREL 1413
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 54.7 bits (130), Expect = 4e-07
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 145 PVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNGDKAVISQ 204
P +P Y+ I +PMD I +K+ Y E++ DD NL+V+N +N + + I
Sbjct: 1212 PTRKELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYV 1271
Query: 205 MARNIQASFEKHMLNMPAKDAPPQQPKRTKTHPDQPVVIRRAPSNSGRP 253
+ I +++ P ++P + K P P PS SG P
Sbjct: 1272 SSETIGKLWKEQYDKFMNPPKPVEEPVK-KKEPSTPSTSSSRPSTSGTP 1319
>At3g52280 [K] KOG1474 Transcription initiation factor TFIID subunit BDF1 and
related bromodomain proteins
Length = 369
Score = 54.3 bits (129), Expect = 6e-07
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 275 SKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKK 334
+K+ Q M+ + +++ K + +PF+ PV+ L YF+ + +PMD T++ +
Sbjct: 88 AKRMQDLMRQFGTIFRQITQHKCA---WPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQ 144
Query: 335 LNNWE---YQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWA 383
+ + Y+ + D+RLVF+N +N E + V M +L + F KWA
Sbjct: 145 MEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWA 196
>At3g19040 [K] KOG0008 Transcription initiation factor TFIID subunit TAF1
Length = 1700
Score = 53.9 bits (128), Expect = 8e-07
Identities = 29/94 (30%), Positives = 48/94 (50%), Gaps = 2/94 (2%)
Query: 268 YESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMD 327
Y + KK Q+ + + + + L K + +Y FL+PV P Y + VK PMD
Sbjct: 1565 YAPQPKRRKKGQVGLANILESIVDTLRVKEVNVSYLFLKPV--TKKEAPNYLEIVKCPMD 1622
Query: 328 LGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFN 361
L T++ K+ EY+ ++F HDV + N + +N
Sbjct: 1623 LSTIRDKVRRMEYRDRQQFRHDVWQIKFNAHLYN 1656
>Hs6382076 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 832
Score = 53.1 bits (126), Expect = 1e-06
Identities = 36/114 (31%), Positives = 57/114 (49%), Gaps = 6/114 (5%)
Query: 272 KPKSKKHQMEMKFCQQV---LKELLSK-KYSSFNYPFLEPVDPVALNCPTYFDFVKEPMD 327
KP K+ E + Q+ LK +L + K +PF+EPV P Y++ ++ PMD
Sbjct: 712 KPSGKEKSKEPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRT--EAPGYYEVIRFPMD 769
Query: 328 LGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
L T+ ++L N Y + + F D++ VF NC +N + + LE F SK
Sbjct: 770 LKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNAAESEYYKCANILEKFFFSK 823
>CE05190 [K] KOG1828 IRF-2-binding protein CELTIX-1 contains BROMO domain
Length = 636
Score = 53.1 bits (126), Expect = 1e-06
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 221 PAKDAPPQQPKR---TKTHPDQPVVIRRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKK 277
P A ++ KR T H + ++ R + ++E+ P +++ P E P +K
Sbjct: 84 PGGGAGGRKKKRAPLTDYHLKKKKILARKAARDAEKEKEVEPEVQEEV-PKEPTPPPPRK 142
Query: 278 HQMEMKFC------QQVLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTV 331
+ +L++L+ K + F PV P P Y D +K PMDL T+
Sbjct: 143 APSFSSYLPIQLMQDHILRKLVEKDPEQY---FAFPVTPSM--APDYRDIIKTPMDLQTI 197
Query: 332 QKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDV 377
++ + + +Y + + D L+ N + +N T+ + RL ++
Sbjct: 198 RENIEDGKYASLPAMKEDCELIVSNAFQYNQPNTVFYLAAKRLSNL 243
>Hs11321642 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1058
Score = 52.8 bits (125), Expect = 2e-06
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 310 PVALN-CPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVN 368
PV+L P Y D +K PMD T++K+L Y+ EFE D L+ NC +N T+
Sbjct: 590 PVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFY 649
Query: 369 MMGHRLED 376
RL D
Sbjct: 650 RAAVRLRD 657
Score = 52.4 bits (124), Expect = 2e-06
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 132 RLKDAKPFHKPVDPVALN-IPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVS 190
+L+D P PV+L +P Y ++I PMD +T+ ++L Y+ + +DF+L++
Sbjct: 577 QLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIID 636
Query: 191 NCIKFNGDKAVISQMA 206
NC+K+N V + A
Sbjct: 637 NCMKYNARDTVFYRAA 652
>Hs7019345 [K] KOG1828 IRF-2-binding protein CELTIX-1 contains BROMO domain
Length = 652
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/142 (26%), Positives = 66/142 (45%), Gaps = 12/142 (8%)
Query: 231 KRTKTHPDQPVVIRRAPSNSGRPKREIHPPKTKDIYPYES-NKPKSKKHQMEMKFCQQVL 289
KRT+ D+ R N + H P D+ P + +K+ ++E Q+ L
Sbjct: 81 KRTRVKEDKKKRDRDQVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQTPLQEAL 140
Query: 290 KEL---LSKKYSS--FNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSE 344
+L L +K S F++P + + P Y +K PMD T+++K+ N +YQ+ E
Sbjct: 141 NQLMRQLQRKDPSAFFSFPVTDFI------APGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
Query: 345 EFEHDVRLVFKNCYAFNPEGTI 366
E + + +L+ N +N TI
Sbjct: 195 ELKDNFKLMCTNAMIYNKPETI 216
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 51.6 bits (122), Expect = 4e-06
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 244 RRAPSNSGRPKREIHPPKTKDIYPYESNKPKSKKHQMEMKFCQQVLKELLSKKYSSFNYP 303
R S + K+ PP K + P N K K K V+K S +
Sbjct: 1431 RDKDDESKKQKKRGRPPAEK-LSPNPPNLTKKMK-----KIVDAVIKYKDSSSGRQLSEV 1484
Query: 304 FLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPE 363
F++ P P Y++ +++P+D +++++ N +Y++ + E DV L+ +N FN E
Sbjct: 1485 FIQL--PSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLE 1542
Query: 364 GTIVNMMGHRLEDVFNS 380
G+++ L+ VF S
Sbjct: 1543 GSLIYEDSIVLQSVFTS 1559
>SPBC4B4.03 [BK] KOG1827 Chromatin remodeling complex RSC subunit
RSC1/Polybromo and related proteins
Length = 803
Score = 51.2 bits (121), Expect = 5e-06
Identities = 34/81 (41%), Positives = 43/81 (52%), Gaps = 7/81 (8%)
Query: 138 PFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDDFNLMVSNCIKFNG 197
PF + DP P Y+ I +PM L I++KL+ YET EQ DDFNLM N FN
Sbjct: 236 PFERLPDPRMF--PEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFND 293
Query: 198 DKAVISQMARNIQASFEKHML 218
SQ+ R+ A F K+ L
Sbjct: 294 PS---SQVYRD--ADFLKNYL 309
>Hs11426183 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 837
Score = 51.2 bits (121), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (49%), Gaps = 6/114 (5%)
Query: 272 KPKSKKHQMEMKFCQQV---LKELLSK-KYSSFNYPFLEPVDPVALNCPTYFDFVKEPMD 327
KP K+ E+K Q+ LK LL++ K +PF+EPV P Y++ ++ P+D
Sbjct: 717 KPLGKEKGKELKDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKS--EAPDYYEVIRFPID 774
Query: 328 LGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
L T+ ++L + Y T + F D++ V NC +NP + LE F K
Sbjct: 775 LKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFK 828
>Hs10835101 [BK] KOG1472 Histone acetyltransferase SAGA/ADA catalytic subunit
PCAF/GCN5 and related proteins
Length = 837
Score = 51.2 bits (121), Expect = 5e-06
Identities = 36/114 (31%), Positives = 57/114 (49%), Gaps = 6/114 (5%)
Query: 272 KPKSKKHQMEMKFCQQV---LKELLSK-KYSSFNYPFLEPVDPVALNCPTYFDFVKEPMD 327
KP K+ E+K Q+ LK LL++ K +PF+EPV P Y++ ++ P+D
Sbjct: 717 KPLGKEKGKELKDPDQLYTTLKNLLAQIKSHPSAWPFMEPVKKS--EAPDYYEVIRFPID 774
Query: 328 LGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSK 381
L T+ ++L + Y T + F D++ V NC +NP + LE F K
Sbjct: 775 LKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFK 828
>Hs4757866 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1214
Score = 50.8 bits (120), Expect = 6e-06
Identities = 24/69 (34%), Positives = 38/69 (54%), Gaps = 1/69 (1%)
Query: 309 DPVALN-CPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIV 367
+PV L+ P Y D +K+PMD T+++ L + Y ++FE D L+ NC +N + TI
Sbjct: 655 EPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIF 714
Query: 368 NMMGHRLED 376
RL +
Sbjct: 715 YRAAVRLRE 723
>Hs15295343 [R] KOG0955 PHD finger protein BR140/LIN-49
Length = 1214
Score = 50.8 bits (120), Expect = 6e-06
Identities = 24/69 (34%), Positives = 38/69 (54%), Gaps = 1/69 (1%)
Query: 309 DPVALN-CPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIV 367
+PV L+ P Y D +K+PMD T+++ L + Y ++FE D L+ NC +N + TI
Sbjct: 655 EPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIF 714
Query: 368 NMMGHRLED 376
RL +
Sbjct: 715 YRAAVRLRE 723
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,166,826
Number of Sequences: 60738
Number of extensions: 1412466
Number of successful extensions: 5586
Number of sequences better than 1.0e-05: 82
Number of HSP's better than 0.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5315
Number of HSP's gapped (non-prelim): 257
length of query: 661
length of database: 30,389,216
effective HSP length: 113
effective length of query: 548
effective length of database: 23,525,822
effective search space: 12892150456
effective search space used: 12892150456
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)