ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0950 good J KOG0378 Translation, ribosomal structure and biogenesis 40S ribosomal protein S4
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0950 333484 334212 243
(243 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR145c [J] KOG0378 40S ribosomal protein S4 462 e-130
YHR203c [J] KOG0378 40S ribosomal protein S4 462 e-130
SPBC19F8.08 [J] KOG0378 40S ribosomal protein S4 381 e-106
SPAC959.07 [J] KOG0378 40S ribosomal protein S4 380 e-106
SPBC21B10.10 [J] KOG0378 40S ribosomal protein S4 380 e-105
Hs4506725 [J] KOG0378 40S ribosomal protein S4 366 e-101
7294504 [J] KOG0378 40S ribosomal protein S4 366 e-101
Hs4506727 [J] KOG0378 40S ribosomal protein S4 358 4e-99
Hs20373177 [J] KOG0378 40S ribosomal protein S4 344 7e-95
At5g58420 [J] KOG0378 40S ribosomal protein S4 330 8e-91
At5g07090 [J] KOG0378 40S ribosomal protein S4 330 1e-90
At2g17360 [J] KOG0378 40S ribosomal protein S4 329 2e-90
CE24278 [J] KOG0378 40S ribosomal protein S4 305 5e-83
Hs17483094 [J] KOG0378 40S ribosomal protein S4 280 1e-75
Hs18559993 [J] KOG0378 40S ribosomal protein S4 211 6e-55
Hs20547872 [J] KOG0378 40S ribosomal protein S4 211 7e-55
Hs20471961 [J] KOG0378 40S ribosomal protein S4 197 1e-50
Hs20561785 [J] KOG0378 40S ribosomal protein S4 193 2e-49
Hs22058449 [J] KOG0378 40S ribosomal protein S4 178 5e-45
Hs20476822 [J] KOG0378 40S ribosomal protein S4 170 2e-42
ECU08g0870 [J] KOG0378 40S ribosomal protein S4 169 4e-42
Hs17457197 [J] KOG0378 40S ribosomal protein S4 165 6e-41
Hs17482433 [J] KOG0378 40S ribosomal protein S4 142 6e-34
Hs17463421 [J] KOG0378 40S ribosomal protein S4 136 2e-32
Hs22060500 [J] KOG0378 40S ribosomal protein S4 118 9e-27
Hs17453883 [J] KOG0378 40S ribosomal protein S4 111 1e-24
Hs22064349 [J] KOG0378 40S ribosomal protein S4 96 3e-20
Hs22061362 [J] KOG0378 40S ribosomal protein S4 92 7e-19
Hs20552301 [J] KOG0378 40S ribosomal protein S4 75 8e-14
Hs17483096 [J] KOG0378 40S ribosomal protein S4 69 8e-12
Hs20558833 [J] KOG0378 40S ribosomal protein S4 55 1e-07
>YJR145c [J] KOG0378 40S ribosomal protein S4
Length = 261
Score = 462 bits (1188), Expect = e-130
Identities = 224/243 (92%), Positives = 238/243 (97%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
+LDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
DTT+PAGFMDVITL+ATNENFRLVYDVKGRFAVHRITDEEASYKL KVKKVQLGKKG+PY
Sbjct: 79 DTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
VVTHDGRTIRYPDPNIKVNDTVK+DLA+G ITDFIKFD GKLVYVTGGRNLGR+GTIVH+
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 240
ERH+GGFDLVHIKDSL+NTFVTRLNNVFVIGE G+P+ISLPKGKGIKL+I+EERDRRRAQ
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQ 258
Query: 241 HGL 243
GL
Sbjct: 259 QGL 261
>YHR203c [J] KOG0378 40S ribosomal protein S4
Length = 261
Score = 462 bits (1188), Expect = e-130
Identities = 224/243 (92%), Positives = 238/243 (97%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
+LDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT
Sbjct: 19 LLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
DTT+PAGFMDVITL+ATNENFRLVYDVKGRFAVHRITDEEASYKL KVKKVQLGKKG+PY
Sbjct: 79 DTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYKLGKVKKVQLGKKGVPY 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
VVTHDGRTIRYPDPNIKVNDTVK+DLA+G ITDFIKFD GKLVYVTGGRNLGR+GTIVH+
Sbjct: 139 VVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHK 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 240
ERH+GGFDLVHIKDSL+NTFVTRLNNVFVIGE G+P+ISLPKGKGIKL+I+EERDRRRAQ
Sbjct: 199 ERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRRRAQ 258
Query: 241 HGL 243
GL
Sbjct: 259 QGL 261
>SPBC19F8.08 [J] KOG0378 40S ribosomal protein S4
Length = 262
Score = 381 bits (979), Expect = e-106
Identities = 183/243 (75%), Positives = 210/243 (86%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
+LDKLSG YAP+PS GPHK RE LPLIVFLRNRLKYALNGREVKAILMQR +KVDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D+TFP GFMDVI++E T E+FRLVYD+KGRF VHRIT EEA YKL KVK+VQLG KG+P+
Sbjct: 79 DSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHDGRTIRYPDP IKVNDT+K++L T I FIKFDT V VTGGRN+GRVGTIVHR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 240
E H G F+++H+KD+L+ F TRL+NVFVIGE G+ WISLPKGKG+KL+I+EERDRRRA
Sbjct: 199 EHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRAL 258
Query: 241 HGL 243
GL
Sbjct: 259 KGL 261
>SPAC959.07 [J] KOG0378 40S ribosomal protein S4
Length = 262
Score = 380 bits (976), Expect = e-106
Identities = 182/243 (74%), Positives = 210/243 (85%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
+LDKLSG YAP+PS GPHK RE LPLIVFLRNRLKYALNGREVKAILMQR +KVDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIKVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D+TFP GFMDVI+++ T E+FRLVYD+KGRF VHRIT EEA YKL KVK+VQLG KG+P+
Sbjct: 79 DSTFPTGFMDVISVDKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHDGRTIRYPDP IKVNDT+K++L T I FIKFDT V VTGGRN+GRVGTIVHR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 240
E H G F+++H+KD+L+ F TRL+NVFVIGE G+ WISLPKGKG+KL+I+EERDRRRA
Sbjct: 199 EHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRAL 258
Query: 241 HGL 243
GL
Sbjct: 259 KGL 261
>SPBC21B10.10 [J] KOG0378 40S ribosomal protein S4
Length = 262
Score = 380 bits (975), Expect = e-105
Identities = 182/243 (74%), Positives = 210/243 (85%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
+LDKLSG YAP+PS GPHK RE LPLIVFLRNRLKYALNGREVKAILMQR ++VDGKVRT
Sbjct: 19 LLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D+TFP GFMDVI++E T E+FRLVYD+KGRF VHRIT EEA YKL KVK+VQLG KG+P+
Sbjct: 79 DSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPF 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHDGRTIRYPDP IKVNDT+K++L T I FIKFDT V VTGGRN+GRVGTIVHR
Sbjct: 139 LVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 240
E H G F+++H+KD+L+ F TRL+NVFVIGE G+ WISLPKGKG+KL+I+EERDRRRA
Sbjct: 199 EHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRRAL 258
Query: 241 HGL 243
GL
Sbjct: 259 KGL 261
>Hs4506725 [J] KOG0378 40S ribosomal protein S4
Length = 263
Score = 366 bits (940), Expect = e-101
Identities = 172/239 (71%), Positives = 204/239 (84%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL+G +APRPS GPHKLRE LPLI+FLRNRLKYAL G EVK I MQR +K+DGKVRT
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAGFMDVI+++ T ENFRL+YD KGRFAVHRIT EEA YKL KV+K+ +G KGIP+
Sbjct: 79 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHD RTIRYPDP IKVNDT+++DL TG ITDFIKFDTG L VTGG NLGR+G I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
ERH G FD+VH+KD+ N+F TRL+N+FVIG+ +PWISLP+GKGI+LTI+EERD+R A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLA 257
>7294504 [J] KOG0378 40S ribosomal protein S4
Length = 261
Score = 366 bits (939), Expect = e-101
Identities = 175/239 (73%), Positives = 205/239 (85%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL G +APRPS GPHKLRESLPL++FLRNRLKYALNG EV I+MQR VKVDGKVRT
Sbjct: 19 MLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAG+MDVITLE T E FRLVYDVKGRF +HRI+ EEA YKL KVKK QLG KG+P+
Sbjct: 79 DPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPF 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHDGRTIRYPDP I ND+V+VD+A+G ITD+IKFD+G L +TGGRNLGRVGT+V+R
Sbjct: 139 LVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
ERH G FD+VHIKDS + F TRL NVF+IG+ +P+ISLPKGKG+KL+I+EERD+R A
Sbjct: 199 ERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKRLA 257
>Hs4506727 [J] KOG0378 40S ribosomal protein S4
Length = 263
Score = 358 bits (919), Expect = 4e-99
Identities = 171/239 (71%), Positives = 200/239 (83%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL+G +APRPS GPHKLRE LPLIVFLRNRLKYAL G EVK I MQR +K+DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDGKVRV 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAGFMDVI++E T E+FRLVYD KGRFAVHRIT EEA YKL KV+K+ +G KGIP+
Sbjct: 79 DVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPH 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHD RTIRYPDP IKVNDTV++DL TG I +FIKFDTG L V GG NLGRVG I +R
Sbjct: 139 LVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
ERH G FD+VH+KD+ N+F TRL+N+FVIG +PWISLP+GKGI+LT++EERD+R A
Sbjct: 199 ERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKRLA 257
>Hs20373177 [J] KOG0378 40S ribosomal protein S4
Length = 263
Score = 344 bits (882), Expect = 7e-95
Identities = 165/239 (69%), Positives = 196/239 (81%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL+G +APRPS GPHKLRE LPLIVFLRNRLKYAL G EVK I MQ +K+DGKVR
Sbjct: 19 MLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDGKVRV 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAGF+DVI++E T E+FRLVY+ KG FAVHRIT EEA YKL KV+K+ +G KGIP+
Sbjct: 79 DITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPH 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHD RTIRYPDP IKVNDTV++DL TG IT FIKFDTG + V G NLGRVG I +R
Sbjct: 139 LVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
ERH G D+VH+KD+ N+F TR++N+FVIG +PWISLP+GKGI+LTI+EERD+R A
Sbjct: 199 ERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLA 257
>At5g58420 [J] KOG0378 40S ribosomal protein S4
Length = 262
Score = 330 bits (847), Expect = 8e-91
Identities = 155/239 (64%), Positives = 192/239 (79%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ +RNRLKYAL REV +ILMQRH++VDGKVRT
Sbjct: 19 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL KV+ +Q G+KGIPY
Sbjct: 79 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 138
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+ T+DGRTIRYPDP IK NDT+K+DL I +FIKFD G +V VTGGRN GRVG I +R
Sbjct: 139 LNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 198
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
E+H+G F+ +HI+DS + F TRL NV+ IG+ +PW+SLPKGKGIKLTI EE +R A
Sbjct: 199 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLA 257
>At5g07090 [J] KOG0378 40S ribosomal protein S4
Length = 263
Score = 330 bits (846), Expect = 1e-90
Identities = 155/239 (64%), Positives = 192/239 (79%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ +RNRLKYAL REV +ILMQRH++VDGKVRT
Sbjct: 20 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 79
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL KV+ +Q G+KGIPY
Sbjct: 80 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 139
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+ T+DGRTIRYPDP IK NDT+K+DL I +FIKFD G +V VTGGRN GRVG I +R
Sbjct: 140 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 199
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
E+H+G F+ +HI+DS + F TRL NV+ IG+ +PW+SLPKGKGIKLTI EE +R A
Sbjct: 200 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLA 258
>At2g17360 [J] KOG0378 40S ribosomal protein S4
Length = 243
Score = 329 bits (844), Expect = 2e-90
Identities = 154/237 (64%), Positives = 191/237 (79%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL G +AP+PS+GPHK RE LPL++ +RNRLKYAL REV +ILMQRH++VDGKVRT
Sbjct: 1 MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+PAGFMDV+++ TNENFRL+YD KGRF +H I DEEA +KL KV+ +Q G+KGIPY
Sbjct: 61 DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+ T+DGRTIRYPDP IK NDT+K+DL I +FIKFD G +V VTGGRN GRVG I +R
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRR 237
E+H+G F+ +HI+DS + F TRL NV+ IG+ +PW+SLPKGKGIKLTI EE +R
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKR 237
>CE24278 [J] KOG0378 40S ribosomal protein S4
Length = 259
Score = 305 bits (780), Expect = 5e-83
Identities = 149/240 (62%), Positives = 184/240 (76%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL G +A RP+ GPHKLRESLPL +FLRNRLKYALN E K IL QR V+VDGKVRT
Sbjct: 18 MLDKLGGVFAVRPNPGPHKLRESLPLSLFLRNRLKYALNYTEAKKILTQRVVRVDGKVRT 77
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
FP GFMDV+ +E TNE FR++YD KGR+ VHRI EA +KL KVK V+ KG+P
Sbjct: 78 CHKFPTGFMDVVAIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPV 137
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+ T DGRTIRYPDP++KVNDT+ +++T ITD +KF+ G L YVTGGRN+GRVG I HR
Sbjct: 138 LTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHR 197
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRAQ 240
ER G D++HIKDS ++F TR++NVFVIG+ + +SLP G GI+L+I+EERD+R AQ
Sbjct: 198 ERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKRMAQ 257
>Hs17483094 [J] KOG0378 40S ribosomal protein S4
Length = 608
Score = 280 bits (716), Expect = 1e-75
Identities = 141/237 (59%), Positives = 176/237 (73%), Gaps = 6/237 (2%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL+G +A RPS GP KLRE LP I FLRNRLKYAL G EVK I MQ +KVDGKVRT
Sbjct: 30 MLDKLTGVFAARPSTGPQKLRECLPHI-FLRNRLKYALTGDEVKKICMQWFIKVDGKVRT 88
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
D T+P GFMDVI+++ T E FRL+Y + RFAVHR+T EE YKL K++K+ + KG P+
Sbjct: 89 DITYPTGFMDVISIDKTGEGFRLIYGINCRFAVHRVTPEEVKYKLCKMRKIFVCTKGTPH 148
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+V HD TIR+PD IKVNDT+++DL TG IT +KFDTG L VTGG N GR+G I +R
Sbjct: 149 LVIHDAHTIRHPDSLIKVNDTIQIDLETGNIT-ALKFDTGNLCLVTGGANWGRIGVITNR 207
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRR 237
ERH G FD +H+KD+ N+F + +FVI + +P ISLP+GKGI+ TI+E RD+R
Sbjct: 208 ERHPGSFDTIHVKDANSNSF----SIIFVIDKGNKPCISLPRGKGIRFTIAEGRDKR 260
Score = 172 bits (435), Expect = 5e-43
Identities = 92/197 (46%), Positives = 116/197 (58%), Gaps = 40/197 (20%)
Query: 41 REVKAILMQRHVKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEE 100
R+ I MQ +K+DGKV+ D T+PAGF DVI++ T ENF L+ + GRFAVH IT EE
Sbjct: 435 RDKVKICMQPFIKMDGKVQIDITYPAGFTDVISIHKTGENFCLICGINGRFAVHCITLEE 494
Query: 101 ASYKLAKVKKVQLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTG 160
A YKL K TG ITDFIKFDTG
Sbjct: 495 AKYKLCK----------------------------------------TGKITDFIKFDTG 514
Query: 161 KLVYVTGGRNLGRVGTIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISL 220
L V G NLGR+G I +R++H G FD+VH+KD+ N F L+N+FV G+ +PWISL
Sbjct: 515 NLCMVIGDTNLGRIGVITNRKKHRGSFDVVHVKDANGNRFAPWLSNIFVTGKCNKPWISL 574
Query: 221 PKGKGIKLTISEERDRR 237
P+GKGI+LTI+E RD+R
Sbjct: 575 PRGKGIRLTIAEGRDKR 591
>Hs18559993 [J] KOG0378 40S ribosomal protein S4
Length = 162
Score = 211 bits (538), Expect = 6e-55
Identities = 105/150 (70%), Positives = 123/150 (82%), Gaps = 1/150 (0%)
Query: 14 SAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRTDTTFPAGFMDVIT 73
+A PHKLRE LPLI+FLRNRLKYAL G EVK I MQ +KVDGKVRTD T+PAGFMDVI+
Sbjct: 10 AAYPHKLRECLPLIIFLRNRLKYALTGDEVK-ICMQGFIKVDGKVRTDITYPAGFMDVIS 68
Query: 74 LEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPYVVTHDGRTIRYPD 133
++ T +NF L+YD KGRFAVHRIT EEA YKL KV+K+ +G KGIP++VTHD +IRY D
Sbjct: 69 IDKTGDNFHLIYDTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDAHSIRYLD 128
Query: 134 PNIKVNDTVKVDLATGTITDFIKFDTGKLV 163
P IKVNDT++ DL TG IT FIKF+TG LV
Sbjct: 129 PLIKVNDTIQTDLETGKITVFIKFNTGTLV 158
>Hs20547872 [J] KOG0378 40S ribosomal protein S4
Length = 153
Score = 211 bits (537), Expect = 7e-55
Identities = 98/153 (64%), Positives = 122/153 (79%)
Query: 69 MDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPYVVTHDGRT 128
M+ I+++ T ENF L+YD K FAVH IT EEA YKL KV+K+ LG KGIP++VTHDGRT
Sbjct: 1 MEAISIDKTEENFSLIYDTKSLFAVHHITPEEAKYKLCKVRKIFLGTKGIPHLVTHDGRT 60
Query: 129 IRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHRERHEGGFD 188
IRY DP IKVNDT+++DL TG ITDFIKFDTG L VTGG NLGR+G I +RERH G FD
Sbjct: 61 IRYTDPLIKVNDTIQIDLETGKITDFIKFDTGHLCMVTGGANLGRIGVITNRERHPGSFD 120
Query: 189 LVHIKDSLENTFVTRLNNVFVIGEPGRPWISLP 221
+VH++D+ N+F T+L+N+FVIG+ + WISLP
Sbjct: 121 IVHMEDANGNSFATQLSNIFVIGKGNKLWISLP 153
>Hs20471961 [J] KOG0378 40S ribosomal protein S4
Length = 179
Score = 197 bits (500), Expect = 1e-50
Identities = 110/239 (46%), Positives = 137/239 (57%), Gaps = 66/239 (27%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDK++ +AP PS+GPHKLRE LPLI+FLRN
Sbjct: 1 MLDKVTSVFAPCPSSGPHKLRECLPLIIFLRN---------------------------- 32
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
RL YD+ A YKL +V+K+ +G KGIP+
Sbjct: 33 ---------------------RLKYDLT-----------VAKYKLCRVRKIFVGTKGIPH 60
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHD TI Y DP +K+DL TG ITDFIKFD GKL VTGG NL R+G I +R
Sbjct: 61 LVTHDAHTIHYLDP------LIKIDLETGKITDFIKFDAGKLCMVTGGANLERIGVITNR 114
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRRRA 239
ERH G FD+V +KD+ N+F RL+N+FVIG+ +PWISLP+GKGI LTI+EERD+R A
Sbjct: 115 ERHPGSFDVVRVKDANGNSFAARLSNIFVIGKGNKPWISLPRGKGIHLTIAEERDKRLA 173
>Hs20561785 [J] KOG0378 40S ribosomal protein S4
Length = 196
Score = 193 bits (491), Expect = 2e-49
Identities = 105/191 (54%), Positives = 124/191 (63%), Gaps = 22/191 (11%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL G +APRPS GPHKLRE LPLIVFLRNRLKYAL G +VK I MQ +K+DGKVR
Sbjct: 19 MLDKLKGIFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDDVKEICMQCFIKIDGKVRV 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
T+PAGF DVI ++ T EEA Y L KV+KV +G KGI
Sbjct: 79 AITYPAGFTDVIGIK---------------------TVEEAKYNLCKVRKVTMGMKGIQR 117
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+VTHD TI YPDP IKVN+TV++DL TG I +FIKF TG V GG +L VG + +R
Sbjct: 118 LVTHDTGTIHYPDPVIKVNNTVQIDLGTGKIINFIKFHTGNACMVIGGASLRHVG-VTNR 176
Query: 181 ERHEGGFDLVH 191
E H G ++ H
Sbjct: 177 EGHPGSLNVGH 187
>Hs22058449 [J] KOG0378 40S ribosomal protein S4
Length = 160
Score = 178 bits (452), Expect = 5e-45
Identities = 89/166 (53%), Positives = 113/166 (67%), Gaps = 14/166 (8%)
Query: 72 ITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPYVVTHDGRTIRY 131
++ + T ENF L+ D K FAVHRI EEA Y+L KV+K+ + KGIP+++THD TI Y
Sbjct: 1 MSTDKTGENFHLICDTKAPFAVHRIAPEEAKYRLCKVRKIFVDTKGIPHLLTHDAHTICY 60
Query: 132 PDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHRERHEGGFDLVH 191
PDP IKVNDT++VDL G IT FIKF+T L VTGG NLGR+G I +RERH G FD+VH
Sbjct: 61 PDPLIKVNDTIQVDLENGKITGFIKFNTENLCMVTGGANLGRIGVITNRERHPGSFDVVH 120
Query: 192 IKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRR 237
KD+ N +PWISLP+GK ++LTI+EE D+R
Sbjct: 121 GKDANSNI--------------NKPWISLPQGKVMRLTIAEETDKR 152
>Hs20476822 [J] KOG0378 40S ribosomal protein S4
Length = 183
Score = 170 bits (430), Expect = 2e-42
Identities = 91/188 (48%), Positives = 123/188 (65%), Gaps = 20/188 (10%)
Query: 52 VKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKV 111
+++D KV+TD T+PAGF DVI ++ T EN RL ++ R+T +
Sbjct: 15 LRIDDKVQTDRTYPAGFKDVIIIDKTRENVRLTCNI-------RVT--------LPFTVL 59
Query: 112 QLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNL 171
QL + IP++VT+D TIRYP P IKVND +++DL TG TD IKFDTG L VTGG NL
Sbjct: 60 QLRRPRIPHLVTNDAGTIRYPGPLIKVNDIIQIDLDTGKSTDVIKFDTGNLWMVTGGANL 119
Query: 172 GRVGTIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTIS 231
GR+G I +RERH G FD+VH+KD+ N+F T L+++FVIG+ + +GKGI LT +
Sbjct: 120 GRIGVITNRERHPGSFDVVHVKDANSNSFATWLSSIFVIGKGNK-----TQGKGIHLTTA 174
Query: 232 EERDRRRA 239
EE D+R A
Sbjct: 175 EETDKRLA 182
>ECU08g0870 [J] KOG0378 40S ribosomal protein S4
Length = 268
Score = 169 bits (427), Expect = 4e-42
Identities = 93/243 (38%), Positives = 150/243 (61%), Gaps = 6/243 (2%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDK G +A P++GPHK E +PL + L+YA N +E+ IL ++++KV+G+VRT
Sbjct: 19 MLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIILAEKNIKVNGRVRT 78
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
++ FP G DV+++E T E+FR++Y+V +F +HRI+ EEASY+L KV K + +GIPY
Sbjct: 79 NSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTKVTK-KYENQGIPY 137
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
+V+ G +IR+ DP I + T+K+ T + ++I K+++V+ G+ GRVG +++
Sbjct: 138 IVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKARGRVG-VINT 196
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRP-WISLPKGKGIKLTISEERDRRRA 239
+G + + D NTF + +IGE WI+LPK +GI+ E ++ A
Sbjct: 197 ISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIR---QSELEKINA 253
Query: 240 QHG 242
Q G
Sbjct: 254 QLG 256
>Hs17457197 [J] KOG0378 40S ribosomal protein S4
Length = 167
Score = 165 bits (417), Expect = 6e-41
Identities = 97/221 (43%), Positives = 116/221 (51%), Gaps = 72/221 (32%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL+G +APRPS PHKLRE LP I+FLRNRL
Sbjct: 19 MLDKLTGVFAPRPSTSPHKLRECLP-IIFLRNRLN------------------------- 52
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
++ T ENFRL+YD KGRFAVH IT EEA YK
Sbjct: 53 -------------IDKTGENFRLIYDTKGRFAVHPITPEEAKYK---------------- 83
Query: 121 VVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHR 180
VNDT++ DL G IT+FIKFD G L VT G NLGR G I +R
Sbjct: 84 -----------------VNDTIQTDLEIGKITNFIKFDNGNLCMVTVGANLGRTGVITNR 126
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLP 221
ERH G FD+VH+KD+ N+F T+L+N+FVIG+ +P SLP
Sbjct: 127 ERHSGSFDVVHMKDANGNSFATQLSNIFVIGKGNKPQTSLP 167
>Hs17482433 [J] KOG0378 40S ribosomal protein S4
Length = 135
Score = 142 bits (357), Expect = 6e-34
Identities = 69/113 (61%), Positives = 83/113 (73%)
Query: 52 VKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKV 111
VK+DGKVRTD T+PAG MDVI + EN +L D KG FAV RIT EEA Y L K++K+
Sbjct: 23 VKIDGKVRTDITYPAGLMDVINTDKMGENSQLTCDTKGHFAVQRITPEEAKYMLCKLRKI 82
Query: 112 QLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVY 164
+G KGIP++VT D I YPDP IKVNDT+++DL TG ITDFIK DTG V+
Sbjct: 83 FVGTKGIPHLVTLDTHAICYPDPLIKVNDTIQIDLETGKITDFIKIDTGTCVW 135
>Hs17463421 [J] KOG0378 40S ribosomal protein S4
Length = 191
Score = 136 bits (343), Expect = 2e-32
Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 16/197 (8%)
Query: 43 VKAILMQRHVKVDGKVRTDTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEAS 102
+K I MQ+ +K+DGKV+TD T+PA FMDVI+++ NF L+YD KG F VH IT EE
Sbjct: 1 MKKICMQQFIKIDGKVQTDITYPARFMDVISIDK-GHNFCLIYDTKGCFGVHCITPEEVK 59
Query: 103 YKLAKVKKVQLGKKGIPYVVTHDGRTIRYPDPNIKVNDTVKVDLATG--TITDFIKFDTG 160
YKL KV+K+ +G KGIP++VTHD TI YPDP IKVN+TV++D TG I+ +
Sbjct: 60 YKLCKVRKILVGTKGIPHLVTHDACTICYPDPLIKVNETVQIDSETGKILISSSLMLREA 119
Query: 161 KLVYVTGGRNLGRVGTIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISL 220
++ G R + R++H H+ N+ G R +L
Sbjct: 120 PWIFCHGSRERRQ------RQQH------CHLAFQHFLLLARATNHGTNHGNKPRA-TNL 166
Query: 221 PKGKGIKLTISEERDRR 237
P+GKG+ LT +++ D+R
Sbjct: 167 PRGKGVHLTFAKDGDKR 183
>Hs22060500 [J] KOG0378 40S ribosomal protein S4
Length = 155
Score = 118 bits (295), Expect = 9e-27
Identities = 66/142 (46%), Positives = 78/142 (54%), Gaps = 38/142 (26%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKL+ +A RPS PHKLRE LPLI FLRNRL
Sbjct: 19 MLDKLTSVFALRPSTSPHKLRECLPLITFLRNRLN------------------------- 53
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
++ ENF L+YD KG FAVH IT EEA YKL KV+K+ +G KGIP+
Sbjct: 54 -------------IDKMGENFCLIYDTKGHFAVHCITPEEAKYKLCKVRKIFVGTKGIPH 100
Query: 121 VVTHDGRTIRYPDPNIKVNDTV 142
VVTHD TI YPDP IK +++
Sbjct: 101 VVTHDAHTICYPDPLIKGTNSI 122
>Hs17453883 [J] KOG0378 40S ribosomal protein S4
Length = 105
Score = 111 bits (277), Expect = 1e-24
Identities = 58/109 (53%), Positives = 69/109 (63%), Gaps = 18/109 (16%)
Query: 69 MDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPYVVTHDGRT 128
MDVI+++ T ENF L+ D KGRFAVH IT EEA YKL KV+K+ +G
Sbjct: 1 MDVISIDKTGENFHLICDTKGRFAVHHITPEEAKYKLCKVRKIFVG-------------- 46
Query: 129 IRYPDPNIKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTI 177
P IKVND +++DL TG ITDF KFDTG L VTG NLGR+G I
Sbjct: 47 ----TPLIKVNDIIQIDLETGKITDFTKFDTGNLCMVTGSANLGRIGVI 91
>Hs22064349 [J] KOG0378 40S ribosomal protein S4
Length = 137
Score = 96.3 bits (238), Expect = 3e-20
Identities = 55/134 (41%), Positives = 64/134 (47%), Gaps = 51/134 (38%)
Query: 1 MLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKVRT 60
MLDKLS + RPS PHKLRE LP+
Sbjct: 19 MLDKLSSVFVHRPSPSPHKLRECLPM---------------------------------- 44
Query: 61 DTTFPAGFMDVITLEATNENFRLVYDVKGRFAVHRITDEEASYKLAKVKKVQLGKKGIPY 120
ENFRL+YD KG FAVHR+T EE YKL KV+K+ +G KGIP+
Sbjct: 45 -----------------GENFRLIYDTKGCFAVHRVTPEEPKYKLCKVRKIFVGTKGIPH 87
Query: 121 VVTHDGRTIRYPDP 134
+VTHD R I YPDP
Sbjct: 88 LVTHDARIICYPDP 101
>Hs22061362 [J] KOG0378 40S ribosomal protein S4
Length = 173
Score = 92.0 bits (227), Expect = 7e-19
Identities = 42/67 (62%), Positives = 52/67 (76%)
Query: 136 IKVNDTVKVDLATGTITDFIKFDTGKLVYVTGGRNLGRVGTIVHRERHEGGFDLVHIKDS 195
IKVND V+ DL TG ITDFI+F+TG L VTGG NLGR+G I +RE+H G FD+VH+KD+
Sbjct: 107 IKVNDIVQTDLETGKITDFIRFNTGNLCMVTGGANLGRIGAITNREKHPGFFDVVHVKDA 166
Query: 196 LENTFVT 202
N+F T
Sbjct: 167 NSNSFAT 173
Score = 51.6 bits (122), Expect = 1e-06
Identities = 23/37 (62%), Positives = 30/37 (80%)
Query: 22 ESLPLIVFLRNRLKYALNGREVKAILMQRHVKVDGKV 58
ESLP+I+FLRNRL+YAL G E K I MQ+ +K+D K+
Sbjct: 59 ESLPVIIFLRNRLRYALTGDEAKKIRMQQFIKIDDKL 95
>Hs20552301 [J] KOG0378 40S ribosomal protein S4
Length = 297
Score = 75.1 bits (183), Expect = 8e-14
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 179 HRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIKLTISEERDRR 237
++ERH G F++VH+K + N+F T L+N+FVI + +PWISLP+GKGI TI+EE+D R
Sbjct: 231 YKERHSGCFNVVHVKHTNGNSFATWLSNIFVISKGNKPWISLPQGKGIHFTIAEEKDER 289
>Hs17483096 [J] KOG0378 40S ribosomal protein S4
Length = 371
Score = 68.6 bits (166), Expect = 8e-12
Identities = 27/47 (57%), Positives = 40/47 (84%)
Query: 181 ERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGKGIK 227
+RH G FD+VH+KD+ N+F T+L+N+FVIG+ +PWISLP+GKG++
Sbjct: 320 KRHPGCFDVVHVKDANSNSFATQLSNLFVIGKGSKPWISLPRGKGVR 366
>Hs20558833 [J] KOG0378 40S ribosomal protein S4
Length = 109
Score = 54.7 bits (130), Expect = 1e-07
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 170 NLGRVG--TIVHRERHEGGFDLVHIKDSLENTFVTRLNNVFVIGEPGRPWISLPKGK 224
NL ++G + RER F++VH+KD N+F +L+N+F+IGE RPWI PK K
Sbjct: 41 NLEQIGKESTRQRERQPDFFNMVHVKDVNGNSFAIQLSNIFIIGEDNRPWIPCPKEK 97
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.141 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,949,596
Number of Sequences: 60738
Number of extensions: 641990
Number of successful extensions: 1282
Number of sequences better than 1.0e-05: 31
Number of HSP's better than 0.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 41
length of query: 243
length of database: 30,389,216
effective HSP length: 103
effective length of query: 140
effective length of database: 24,133,202
effective search space: 3378648280
effective search space used: 3378648280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)