ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII0955 good F KOG4419 Nucleotide transport and metabolism 5' nucleotidase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII0955 336277 334367 -637
(637 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR202w [F] KOG4419 5' nucleotidase 559 e-159
SPBPB2B2.06c [F] KOG4419 5' nucleotidase 347 3e-95
SPAC1039.02 [F] KOG4419 5' nucleotidase 335 1e-91
SPAC17G6.03 [F] KOG4419 5' nucleotidase 266 9e-71
>YHR202w [F] KOG4419 5' nucleotidase
Length = 602
Score = 559 bits (1440), Expect = e-159
Identities = 284/583 (48%), Positives = 384/583 (65%), Gaps = 26/583 (4%)
Query: 70 PFTPQQSVLSTVERETDKLRDLDIGQLNFLHTTDTHGWLGSHLNQDNYNAKWGDLISFID 129
P+ QQ+VL+ + LRD+ IG +NF+HTTDTHGWLGSHL+Q++Y+A WGD ++F+D
Sbjct: 20 PYQQQQAVLAP--SQDVPLRDIHIGDINFIHTTDTHGWLGSHLSQNDYDADWGDFVAFVD 77
Query: 130 KFKRNVVRDN-DLLIIDTGDKHDGNGFSDATQPNGLNSTQIFNELDYDLLTLGNHELYVE 188
+ ++R + D+++IDTGDK DGNG SDAT P GL S++IFN +DYDLLTLGNHELY
Sbjct: 78 ILREKILRQSRDVIVIDTGDKRDGNGLSDATWPPGLRSSEIFNMMDYDLLTLGNHELYTA 137
Query: 189 DNTVLEYYETVMNPKFSNKYVSSNVEFIKEDGSVVPFGSKYRYFKTEKHGLRVLALSFLF 248
++ +LEY T + KF +KYV SNVEFI++DG+ VPFG+KY F+T RVLALSFLF
Sbjct: 138 ESAILEYRGTSQSSKFKDKYVCSNVEFIEDDGTRVPFGNKYITFETPIMKQRVLALSFLF 197
Query: 249 DFKRYNKRAQVTPVSKEI-KKPWFNEVTGNYSREEVDILLVFGHMPISDPENREINHLHA 307
F+R N RA VTP +EI +K WF + EE+D+++VFGH+P +DP RE++ +HA
Sbjct: 198 SFQRANNRAIVTPPLEEITQKSWFQNMVETNREEEIDLIIVFGHLPATDPTEREMHKIHA 257
Query: 308 KLRHIYPNTVIQYFGAHTHIRDFVELDNKASALQSGRFCETVGFASI---DDITKESPVV 364
+R YPNTVIQYFG HTHIRDFV+LD+K++ LQSGRF ETVGF SI D + ESP+
Sbjct: 258 LIRKYYPNTVIQYFGGHTHIRDFVQLDSKSTCLQSGRFAETVGFLSINMTDPVDAESPIF 317
Query: 365 SRKYIDFNLDSFLHHSKS---RNTKEFDTEKGVEVNQRLDRLREYLNLTTKYGDVPSTYY 421
SR+YIDFN ++F +H + T+KG +++ ++ LR LNL K G +P TYY
Sbjct: 318 SRRYIDFNKEAFKYHLSKLGHDSNVPVSTKKGKTISRLVNDLRHELNLNEKLGYIPQTYY 377
Query: 422 MYNKPLSSPHNIYHLLTEKVLPRLAPENSDANESLTSRIIMINTGAIRYDLYKGPFTADT 481
+ +PL+S N+YHL+T K+LP L P + E SR I+INTG++RYDLYKGPFT DT
Sbjct: 378 VSTRPLNSEENLYHLITHKILPNLIPPKN--YEPSMSRFILINTGSVRYDLYKGPFTKDT 435
Query: 482 EYTISPFSNSWNYIQLPARLAIQVESYLNGLGPILTLNAVGKEH--------RQCPFVDD 533
EY + PF+N W +I +P +A +VE+YLN I +L H ++CPF+++
Sbjct: 436 EYIVMPFNNDWRFITVPLVVASRVETYLNKGPVIASLGIPSSSHHKQHFGGFQKCPFINN 495
Query: 534 KTLSKGYTTSDDLGCEGDDTAHRSEHQYRIPNVVQS------XXXXXXXXXXXXXXXXSF 587
LS+GYTT DD GC GDDT H S+ +Y IPNVVQ SF
Sbjct: 496 PNLSEGYTTEDDFGCHGDDTPHNSQREYDIPNVVQCKEVKKVQEEEADPSKMVHVIFYSF 555
Query: 588 IQPFVLQALNDLNEDQNIVNHSFNESDCRIYGVTSIKDLLRGY 630
++ +L A+N + D + + +DC YG S K LLR Y
Sbjct: 556 MELDILNAVNSIINDLGLRMENLTTNDCSHYGGDSTKKLLRDY 598
>SPBPB2B2.06c [F] KOG4419 5' nucleotidase
Length = 601
Score = 347 bits (890), Expect = 3e-95
Identities = 207/575 (36%), Positives = 318/575 (55%), Gaps = 62/575 (10%)
Query: 62 SCTLGAVLPFTPQQSVLSTVERETDKLRDLDIGQLNFLHTTDTHGWLGSHLNQDNYNAKW 121
SC +G+V+ ++ L+T+ ++ L+ GQ+NF+HTTDTHGWL HL Y A +
Sbjct: 17 SC-IGSVIAYSSTD--LTTMYDWNQIIKPLEWGQMNFIHTTDTHGWLNGHLRDARYKADF 73
Query: 122 GDLISFIDKFKRNV-VRDNDLLIIDTGDKHDGNGFSDATQPNGLNSTQIFNELDYDLLTL 180
G+ SF+ + K +D DLL++DTGD HDGNG SDA+ P G+ + IF L YD+LT+
Sbjct: 74 GEFKSFVLRMKELADFKDVDLLLVDTGDLHDGNGLSDASDPEGIYTNNIFTYLPYDILTI 133
Query: 181 GNHELYVE--DNTVLEYYETVMNPKFSNKYVSSNVEFIKEDGSVVPFGSKYRYFKTEKHG 238
GNHELY N EY+ P ++ Y++SNV+ + F ++ YF T KHG
Sbjct: 134 GNHELYQASVSNNTHEYFV----PHWNGTYLASNVQIFNSSNELEQFAAESAYF-TTKHG 188
Query: 239 LRVLALSFLFDFKRYNKRAQVTPVSKEIKKPWFNEVTGNYSREEVDILLVFGHMPISDPE 298
+RVLA+ FL+DF VTPV + W+ + +R +VD+ L+ GH+P+ D +
Sbjct: 189 VRVLAVGFLYDFTGNANNTVVTPVETAVNSRWYQQ---QINRTDVDLFLLLGHIPVRDWD 245
Query: 299 NREINHLHAKLRHIYPNTVIQYFGAHTHIRDFVELDNKASALQSGRFCETVGFASIDDI- 357
E LHA +R ++P+T IQ FG H+HIRDF D + +L+ GR+CETVG+ SID +
Sbjct: 246 --EWKSLHASIRKVHPDTPIQIFGGHSHIRDFAVYDESSVSLEGGRYCETVGWLSIDGLA 303
Query: 358 ----------------TKES----PV------VSRKYIDFNLDSFLHHSKSRNTKEFDTE 391
T++S P+ +R+YIDFN +F H++ ++ FDT
Sbjct: 304 ASNATRQYVGRPVTNETRQSYPNLPIPNTPLYYTRRYIDFNRQNFRFHTQ-QSEDSFDTP 362
Query: 392 KGVEVNQRLDRLREYLNLTTKYGDVPSTYYMYNKPLSSPHNIYHLLTEKVLPRLAPENSD 451
+G+E+++ + + R+ LNL+ +G VP YYM S +I+ L+T++VLP + ++
Sbjct: 363 EGIELSKIIKQYRDDLNLSYVFGCVPKNYYMTEVSPQSDDSIFKLMTDRVLPEII---TN 419
Query: 452 ANESLTSRIIMINTGAIRYDLYKGPFTADTEYTISPF-SNSWNYI-QLPARLAIQVESYL 509
N S RII+ N G IR +Y+G F D + ++PF +N + Y+ +P + A ++ S L
Sbjct: 420 RNRSTVPRIIISNGGGIRGSMYQGKFGPDEMFQLNPFLTNYYMYLADVPYKYAKKLYSTL 479
Query: 510 NGLGPILTLNAVGKEHRQCPFVDDKTLSKGYTTSDDLGCEGDDTAHRSEHQYRIPNVVQS 569
NG + +N + L+ GY TSDD G +GDDT H S Y PN++Q+
Sbjct: 480 NGGSNLRNINE-----------NLAALNPGYVTSDDFGEDGDDTVHTSVPSYATPNILQA 528
Query: 570 XXXXXXXXX--XXXXXXXSFIQPFVLQALNDLNED 602
+F+Q VL+ALN++ D
Sbjct: 529 QAGFNATSSPETIDVVFLNFLQSIVLKALNNMAND 563
>SPAC1039.02 [F] KOG4419 5' nucleotidase
Length = 601
Score = 335 bits (859), Expect = 1e-91
Identities = 204/574 (35%), Positives = 305/574 (52%), Gaps = 60/574 (10%)
Query: 61 LSCTLGAVLPFTPQQSV-LSTVERETDKLRDLDIGQLNFLHTTDTHGWLGSHLNQDNYNA 119
L+ LG + T + L+T+ ++ L+ GQLNF+HTTDTHGWLG HL Y A
Sbjct: 12 LASLLGLISSATAYSATDLTTMYDWNQIIKPLEWGQLNFIHTTDTHGWLGGHLRDARYKA 71
Query: 120 KWGDLISFIDKFKRNV-VRDNDLLIIDTGDKHDGNGFSDATQPNGLNSTQIFNELDYDLL 178
+G+ SF + K + DLL++DTGD HDGNG SDA+ P G+ + IF L YD+L
Sbjct: 72 DFGEFKSFALRMKELADFKGVDLLMVDTGDLHDGNGLSDASDPQGIYTNNIFTYLPYDIL 131
Query: 179 TLGNHELY--VEDNTVLEYYETVMNPKFSNKYVSSNVEFIKEDGSVVPFGSKYRYFKTEK 236
T+GNHELY N EY+ P ++ Y++SNV+ + FG + YF T K
Sbjct: 132 TIGNHELYQAAISNNTHEYFV----PHWNGTYLASNVQIYNSSNELEQFGGESTYFIT-K 186
Query: 237 HGLRVLALSFLFDFKRYNKRAQVTPVSKEIKKPWFNEVTGNYSREEVDILLVFGHMPISD 296
HG+R LA+ FLF+F VTPV IK W+ + +R +VD+ L+ GH+P+ D
Sbjct: 187 HGVRTLAMGFLFNFSSNANNTVVTPVETAIKSEWYQQ---QINRTDVDLFLLIGHIPVRD 243
Query: 297 PENREINHLHAKLRHIYPNTVIQYFGAHTHIRDFVELDNKASALQSGRFCETVGFASIDD 356
+ E LHA +R ++PNT IQ G H+HIRDF D + +L+ GR+CETVG+ SID
Sbjct: 244 YD--EWKSLHASIRKVHPNTPIQILGGHSHIRDFAVYDEASVSLEGGRYCETVGWLSIDG 301
Query: 357 ITKES--------PVV-------------------SRKYIDFNLDSFLHHSKSRNTKEFD 389
++ + PV +R+YIDFN +F H++ ++ FD
Sbjct: 302 LSASNATRQYVGRPVTNETRQSYPNLPKPATPLYYTRRYIDFNRQNFRFHTQ-QSEDSFD 360
Query: 390 TEKGVEVNQRLDRLREYLNLTTKYGDVPSTYYMYNKPLSSPHNIYHLLTEKVLPRLAPEN 449
T +GVE+++ + + R+ LNL+ +G +P YYM + +I+ L+ + +LP +
Sbjct: 361 TPEGVELSKVIKQYRDDLNLSYVFGCIPKNYYMTEVSPQAEDSIFKLMVDHILPEVL--- 417
Query: 450 SDANESLTSRIIMINTGAIRYDLYKGPFTADTEYTISPF-SNSWNYI-QLPARLAIQVES 507
+ N S II+ N G +R +Y+G F D + ++PF +N +NYI +P + A ++ S
Sbjct: 418 VNENRSSVPHIIISNGGGVRGSMYEGTFGPDEMFQLNPFLTNYYNYIPDVPYKYAKKLYS 477
Query: 508 YLNGLGPILTLNAVGKEHRQCPFVDDKTLSKGYTTSDDLGCEGDDTAHRSEHQYRIPNVV 567
LNG + +N L+ GY TSDD G +GDDT H Y +PNV+
Sbjct: 478 ILNGGSTLRNVNDY-----------LAALNPGYVTSDDFGEDGDDTVHTYVSTYAVPNVL 526
Query: 568 QSXXXXXXXXX--XXXXXXXSFIQPFVLQALNDL 599
Q+ ++ Q VL+ALN +
Sbjct: 527 QAQVGFNTTSAPETVDVVFLNYFQTKVLKALNTM 560
>SPAC17G6.03 [F] KOG4419 5' nucleotidase
Length = 635
Score = 266 bits (679), Expect = 9e-71
Identities = 173/570 (30%), Positives = 272/570 (47%), Gaps = 71/570 (12%)
Query: 89 RDLDIGQLNFLHTTDTHGWLGSHLNQDNYNAKWGDLISFIDKFKRNVV-RDNDLLIIDTG 147
R+L GQ+N LHTTD HGWL H Y+ GD SF+ K +D DLL++DTG
Sbjct: 31 RELTWGQVNILHTTDIHGWLAGHARDKRYSGDLGDFASFVQHMKHLAKQKDVDLLLVDTG 90
Query: 148 DKHDGNGFSDATQPNGLNSTQIFNELDYDLLTLGNHELYVEDNTVLEYYETVMNPKFSNK 207
D HDG G SD T P G + + +DYD+L GNHELY+ Y+ + P + +
Sbjct: 91 DLHDGTGLSDLTDPPGSWTDSLLANMDYDILVAGNHELYLSTVANDTYHNFI--PLWEGR 148
Query: 208 YVSSNVEFIKED-GSVVPFGSKYRYFKTEKHGLRVLALSFLFDFKRYNKRAQVTPVSKEI 266
Y+++N++ E S VPFG +Y F T H +++LA F+ F +V PVS+
Sbjct: 149 YLAANIDIYDEHVSSFVPFGDRYAIFST-PHNVKILAFGFVNSFSGATDTVRVLPVSQFS 207
Query: 267 KKPWFNEVTGNYSREEVDILLVFGHMPISDPENREINHLHAKLRHIYPNTVIQYFGAHTH 326
+PW+N++ N +++D++L+ H+P+ + E++ + ++LR +P T IQ G H+H
Sbjct: 208 LQPWWNDMVSN---KDIDLILIPAHVPVHNAS--ELDIVLSELRIHFPTTPIQVLGGHSH 262
Query: 327 IRDFVELDNKASALQSGRFCETVGFASIDDITKESPVV---------------------- 364
IRD+ D KA ++SGR+CETVG+ SI+ I +V
Sbjct: 263 IRDYAIYDEKAVGIESGRYCETVGWVSINGIPSFKSLVKLSGISSLMGVESYLAERLRFI 322
Query: 365 -------------------------SRKYIDFNLDSFLHHSKSRNTKEFDTEKGVEVNQR 399
SR YID+N + F+ HSK++ + F+T G ++
Sbjct: 323 GESIRRSSQQIFSSLQSAKSASVSFSRSYIDWNPEGFMFHSKTKKS-SFNTSLGEFISNG 381
Query: 400 LDRLREYLNLTTKYGDVPSTYYMYNKPLSSPHNIYHLLTEKVLPRLAPENSDANESLTSR 459
+ R+ L L T G P + P + ++IYHL ++ P++ S +
Sbjct: 382 IYEARKALGLLTPIGCSPKKFAFSEVPFNDSNSIYHLFQSELFPKIVVNESRHH---IPH 438
Query: 460 IIMINTGAIRYDLYKGPFTADTEYTISPFSNSWNYI--QLPARLAIQVESYLNGLGPIL- 516
I++N+G IR L G F D + + PF ++ Y+ +P + + L G ++
Sbjct: 439 YIIVNSGGIRGGLNSGAFGLDEVFQVCPFKSNIFYVLKDVPWSITKYLPQALQHSGYLIA 498
Query: 517 --TLNAVGKEHRQCPFVD--DKTLSK--GYTTSDDLGCEGDDTAHRSEHQYRIPNVVQSX 570
TL + F D + ++ K GYTT DDLG +GDDTAH + Y + S
Sbjct: 499 EDTLQINTPQVSDAKFEDFYEHSIRKTYGYTTHDDLGDDGDDTAHLTTPHYEPLRFICSQ 558
Query: 571 XXXXXXXXXXXXXXXSFIQP-FVLQALNDL 599
+ P FV+ L+D+
Sbjct: 559 VGFDDSFSGDDKQVVDVVAPSFVIPRLDDI 588
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,927,880
Number of Sequences: 60738
Number of extensions: 1652693
Number of successful extensions: 3668
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3629
Number of HSP's gapped (non-prelim): 5
length of query: 637
length of database: 30,389,216
effective HSP length: 113
effective length of query: 524
effective length of database: 23,525,822
effective search space: 12327530728
effective search space used: 12327530728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)