ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1025 good P KOG0560 Inorganic ion transport and metabolism Sulfite reductase (ferredoxin)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII1025 363468  364055 196  
         (196 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YJR137c [P] KOG0560 Sulfite reductase (ferredoxin)                    285   4e-77
SPAC10F6.01c [P] KOG0560 Sulfite reductase (ferredoxin)               224   8e-59
At5g04590 [P] KOG0560 Sulfite reductase (ferredoxin)                  109   2e-24

>YJR137c [P] KOG0560 Sulfite reductase (ferredoxin)
          Length = 1442

 Score =  285 bits (728), Expect = 4e-77
 Identities = 132/195 (67%), Positives = 163/195 (82%)

Query: 1    MKKDNFGHFRLTGNQHVLISDVDDEHLDEVKAIMNKYKLDNTNFSGLRLSSAACVALPTC 60
            M K N GHFRLTGNQH++IS++ DEH+  +K+I+  YKLDNT+FSGLRLSS++CV LPTC
Sbjct: 1247 MLKTNSGHFRLTGNQHLVISNITDEHVAGIKSILKTYKLDNTDFSGLRLSSSSCVGLPTC 1306

Query: 61   GLAMAESERYLPVLITKLENALEEYGLRHDSIVMRMTGCPNGCARPWLAEVALVGKAPXX 120
            GLA AESER+LP +IT+LE+ LEEYGLRHDSI+MRMTGCPNGC+RPWL E+ALVGKAP  
Sbjct: 1307 GLAFAESERFLPDIITQLEDCLEEYGLRHDSIIMRMTGCPNGCSRPWLGELALVGKAPHT 1366

Query: 121  XXXXXXXXXXXQRLNKLYRASIKEDEILATLKPLFKRWSLERLEGEHFGDFVIRVGVIKP 180
                       QRLNKLY+A++K++EI+  +KPLFKR++LER EGEHFGDF IRVG+IKP
Sbjct: 1367 YNLMLGGGYLGQRLNKLYKANVKDEEIVDYIKPLFKRYALEREEGEHFGDFCIRVGIIKP 1426

Query: 181  TLEGKYFHDDLPEEA 195
            T EGKYFH+D+ E+A
Sbjct: 1427 TTEGKYFHEDVSEDA 1441


>SPAC10F6.01c [P] KOG0560 Sulfite reductase (ferredoxin)
          Length = 1473

 Score =  224 bits (570), Expect = 8e-59
 Identities = 112/176 (63%), Positives = 132/176 (74%)

Query: 9    FRLTGNQHVLISDVDDEHLDEVKAIMNKYKLDNTNFSGLRLSSAACVALPTCGLAMAESE 68
            FRLT NQHV++ +V +  L  +   M KYKLDN  FSGLRLSSAACVALPTCGLAMAESE
Sbjct: 1283 FRLTANQHVILFNVAENELGWINEHMAKYKLDNNAFSGLRLSSAACVALPTCGLAMAESE 1342

Query: 69   RYLPVLITKLENALEEYGLRHDSIVMRMTGCPNGCARPWLAEVALVGKAPXXXXXXXXXX 128
            RYLP LITK+E  + E GL+ DSIVMRMTGCPNGC+RPW+AE+A VGKAP          
Sbjct: 1343 RYLPKLITKVEEIVYEAGLQKDSIVMRMTGCPNGCSRPWVAEIACVGKAPNTYNLMLGGG 1402

Query: 129  XXXQRLNKLYRASIKEDEILATLKPLFKRWSLERLEGEHFGDFVIRVGVIKPTLEG 184
               QRLNKLYR+S++E EIL  L+PL KR++LER +GEHFGD+VIR G+I     G
Sbjct: 1403 FYGQRLNKLYRSSVQEKEILNLLRPLIKRYALEREDGEHFGDWVIRAGIITAVENG 1458


>At5g04590 [P] KOG0560 Sulfite reductase (ferredoxin)
          Length = 642

 Score =  109 bits (273), Expect = 2e-24
 Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 2/172 (1%)

Query: 10  RLTGNQHVLISDVDDEHLDEVKAIMNKYKLDNTNF-SGLRLSSAACVALPTCGLAMAESE 68
           R+T NQ++++ D+  E    +  ++ +  L    F   L  ++ AC A P C LA+ E+E
Sbjct: 458 RITPNQNIVLCDIKTEWKRPITTVLAQAGLLQPEFVDPLNQTAMACPAFPLCPLAITEAE 517

Query: 69  RYLPVLITKLENALEEYGLRHD-SIVMRMTGCPNGCARPWLAEVALVGKAPXXXXXXXXX 127
           R +P ++ ++    E+ GL +D S+V+R+TGCPNGCARP++AE+ LVG  P         
Sbjct: 518 RGIPSILKRVRAMFEKVGLDYDESVVIRVTGCPNGCARPYMAELGLVGDGPNSYQVWLGG 577

Query: 128 XXXXQRLNKLYRASIKEDEILATLKPLFKRWSLERLEGEHFGDFVIRVGVIK 179
                ++ + +   +K  ++    +PLF  W LER   E FG++  R+G  K
Sbjct: 578 TPNLTQIARSFMDKVKVHDLEKVCEPLFYHWKLERQTKESFGEYTTRMGFEK 629


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.321    0.139    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,319,320
Number of Sequences: 60738
Number of extensions: 409246
Number of successful extensions: 912
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 908
Number of HSP's gapped (non-prelim): 3
length of query: 196
length of database: 30,389,216
effective HSP length: 101
effective length of query: 95
effective length of database: 24,254,678
effective search space: 2304194410
effective search space used: 2304194410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)