ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII1096   suspect: LH   S     KOG4487  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII1096 388079  388477 133  
         (133 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHR191c [S] KOG4487 Uncharacterized conserved protein                 112   2e-25

>YHR191c [S] KOG4487 Uncharacterized conserved protein
          Length = 133

 Score =  112 bits (279), Expect = 2e-25
 Identities = 62/136 (45%), Positives = 86/136 (62%), Gaps = 6/136 (4%)

Query: 1   MPSVDISVNQLIDIFAEDRDTPPTVSTSLGHVMIEIQGDLQHPQKSIDPAL---DVDSRF 57
           MPSVDI  +Q   +  + R+   TV T LG +M+EIQG+L+ P+     A      + RF
Sbjct: 1   MPSVDIDASQWQKL-TQSREKQTTVITPLGMMMLEIQGELELPKDFASLARRDSPNEGRF 59

Query: 58  IEHEGNGLVRFGILSYDLETKHVTLFIGNKQRLMGSIVKIEPPLGLLKFDKADGTVSLRD 117
            E +G  L+RFG L  D E    TLF+G KQRL+G + K++ P+G++ F+  D  V L D
Sbjct: 60  SEQDGETLIRFGSLQIDGE--RATLFVGKKQRLLGKVTKLDVPMGIMHFNSKDNKVELVD 117

Query: 118 VLKYKIIFKNRPLPIM 133
           V+KYK+IFK+RPLPIM
Sbjct: 118 VMKYKVIFKDRPLPIM 133


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.321    0.143    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,242,390
Number of Sequences: 60738
Number of extensions: 330706
Number of successful extensions: 617
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 1
length of query: 133
length of database: 30,389,216
effective HSP length: 94
effective length of query: 39
effective length of database: 24,679,844
effective search space: 962513916
effective search space used: 962513916
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)