ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1112 good F KOG4145 Nucleotide transport and metabolism Allantoicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1112 394524 395582 353
(353 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YIR029w [F] KOG4145 Allantoicase 443 e-124
SPAC1F7.09c [F] KOG4145 Allantoicase 301 7e-82
Hs10092655 [F] KOG4145 Allantoicase 60 5e-09
>YIR029w [F] KOG4145 Allantoicase
Length = 343
Score = 443 bits (1139), Expect = e-124
Identities = 209/353 (59%), Positives = 265/353 (74%), Gaps = 14/353 (3%)
Query: 1 MHTFKENQAKEFETIVSQQYQSVEILNNRVQGQVISFSDQWFADAANLLTPTAPVRDATR 60
M F EF++I+ + ++V+++ +++ GQV+SFSD+WFA A NL+ PTAP+RD TR
Sbjct: 1 MKFFSLADEAEFKSIIISKNKAVDVIGSKLGGQVVSFSDEWFASAENLIQPTAPIRDPTR 60
Query: 61 FTHAGAWYDGWETRRHNTEEYDWVIIKAGVYAARIIGCEVDTAYFNGNHAPAIAVQGLYS 120
F H+GAWYDGWETRRHN EYDWVIIK GV AA IIG E+DTA+FNGNHAP ++++ LY
Sbjct: 61 FVHSGAWYDGWETRRHNEMEYDWVIIKMGVAAAHIIGGEIDTAFFNGNHAPFVSIEALYD 120
Query: 121 EVSSEGEE-TLSENDSRWTDVIEKVECGPSQRHFFLR-DSLTESHYNYFKLKMFPDGGIA 178
E GEE + E+DSRW +++EK ECGPSQRH F+R + LT+ + + KLKM+PDGGIA
Sbjct: 121 E----GEEGNIVEDDSRWVEIVEKFECGPSQRHLFVRGNGLTKERFTHIKLKMYPDGGIA 176
Query: 179 RFRLYGKVVPPISDYDGDSALFDSAIGLDLCNIVNGAVAISVSDQHFGSANNLIMPGRGH 238
RFRLYG+VVPP L +DL + NGAVA+ SDQHFGS +NL++PGRGH
Sbjct: 177 RFRLYGRVVPP--------ELKTKDHIIDLAYVCNGAVALKYSDQHFGSVDNLLLPGRGH 228
Query: 239 DMSDGWETSRSRTPGHVDWAIIQLGRGTKHINRVVVDTAHFRGNFPQFITVHGIKTLGES 298
DMSDGWET RSR PGH DWA+IQLGR + I +++VDTAHFRGNFPQFITV G ES
Sbjct: 229 DMSDGWETKRSRQPGHTDWAVIQLGRESSFIEKIIVDTAHFRGNFPQFITVEGCLKESES 288
Query: 299 APSHDDSNWICLVDKSKTGPDKEHEYVINKSLEITHIKLTIIPDGGVKRVRVF 351
+ + + W+ LV KSKTGPDKEH Y I KS+ ++H+KLTIIPDGGVKR+RV+
Sbjct: 289 SENTGEGTWVELVGKSKTGPDKEHVYEIRKSIRVSHVKLTIIPDGGVKRIRVW 341
Score = 78.2 bits (191), Expect = 2e-14
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 35 ISFSDQWFADAANLLTPTAPVRDATRFTHAGAWYDGWETRRHNTEEY-DWVIIKAGVYAA 93
+ +SDQ F NLL P DGWET+R + DW +I+ G ++
Sbjct: 208 LKYSDQHFGSVDNLLLPG----------RGHDMSDGWETKRSRQPGHTDWAVIQLGRESS 257
Query: 94 RIIGCEVDTAYFNGNHAPAIAVQGLYSEVSSEGEETLSENDSRWTDVIEKVECGPSQRHF 153
I VDTA+F GN I V+G E SE E E W +++ K + GP + H
Sbjct: 258 FIEKIIVDTAHFRGNFPQFITVEGCLKE--SESSENTGEGT--WVELVGKSKTGPDKEHV 313
Query: 154 F-LRDSLTESHYNYFKLKMFPDGGIARFRLYG 184
+ +R S+ SH KL + PDGG+ R R++G
Sbjct: 314 YEIRKSIRVSHV---KLTIIPDGGVKRIRVWG 342
>SPAC1F7.09c [F] KOG4145 Allantoicase
Length = 342
Score = 301 bits (772), Expect = 7e-82
Identities = 146/337 (43%), Positives = 213/337 (62%), Gaps = 29/337 (8%)
Query: 22 SVEILNNRVQGQVISFSDQWFADAANLLTPTAPVRDATRFTHAGAWYDGWETRRHNTEEY 81
SV++++ + GQV+ SD +FA NL+ P P+R A F GAWYDGWETRRHNT
Sbjct: 22 SVDLISRALGGQVLGCSDDFFASCENLINPADPIRKAGVFVETGAWYDGWETRRHNTAPC 81
Query: 82 DWVIIKAGVYAARIIGCEVDTAYFNGNHAPAIAVQGLYSEVSSEGEETLSENDSRWTDVI 141
DWVI+K G + R+ GCE+DT +FNGNHAP ++V+ + + +T WT ++
Sbjct: 82 DWVIVKLGPSSGRVTGCEIDTTFFNGNHAPEVSVEAAFLPEGNPDAKT------NWTPIL 135
Query: 142 EKVECGPSQRHFFLRDSLTESHYNYFKLKMFPDGGIARFRLYGKVVPPI-SDYDGDSALF 200
K+ CGP+QRH + + + ++ + +L M+PDGGIARFRLYG VVP +D D
Sbjct: 136 PKLPCGPTQRHIYRFKEIPQQNFTHVRLCMYPDGGIARFRLYGNVVPVFPADLDA----- 190
Query: 201 DSAIGLDLCNIVNGAVAISVSDQHFGSANNLIMPGRGHDMSDGWETSRSRTPGHVDWAII 260
LDL ++ G + + SDQHFG +NL++PGRG +M DGWET+RSR GHVDW I+
Sbjct: 191 ----RLDLAHMYLGGLVVQCSDQHFGKKDNLLLPGRGVNMGDGWETARSREKGHVDWVIV 246
Query: 261 QLG-RGTKHINRVVVDTAHFRGNFPQFITVHGIKTLGESAPSH---DDSNWICLVDKSKT 316
+LG RG +I+ ++DT HF+GN+P+ + + I +P H D+ W+ ++ K
Sbjct: 247 KLGARG--YIDDALIDTNHFKGNYPKEVILEAI-----DSPDHIPGPDAQWVTILPARKL 299
Query: 317 GPDKEHEY--VINKSLEITHIKLTIIPDGGVKRVRVF 351
GP EH + + N S +TH+++ IIPDGGVKR+R++
Sbjct: 300 GPHMEHVFTNLQNNSTPMTHVRMIIIPDGGVKRLRIY 336
Score = 70.9 bits (172), Expect = 3e-12
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 32 GQVISFSDQWFADAANLLTPTAPVRDATRFTHAGAWYDGWETRRHNTEEY-DWVIIKAGV 90
G V+ SDQ F NLL P V DGWET R + + DWVI+K G
Sbjct: 201 GLVVQCSDQHFGKKDNLLLPGRGVNMG----------DGWETARSREKGHVDWVIVKLGA 250
Query: 91 YAARIIGCEVDTAYFNGNHAPAIAVQGLYSEVSSEGEETLSENDSRWTDVIEKVECGPSQ 150
I +DT +F GN+ + ++ + S G D++W ++ + GP
Sbjct: 251 -RGYIDDALIDTNHFKGNYPKEVILEAIDSPDHIPGP------DAQWVTILPARKLGPHM 303
Query: 151 RHFFLRDSLTESHYNYFKLKMFPDGGIARFRLYGK 185
H F + + ++ + PDGG+ R R+YG+
Sbjct: 304 EHVFTNLQNNSTPMTHVRMIIIPDGGVKRLRIYGR 338
>Hs10092655 [F] KOG4145 Allantoicase
Length = 161
Score = 60.1 bits (144), Expect = 5e-09
Identities = 46/138 (33%), Positives = 65/138 (46%), Gaps = 32/138 (23%)
Query: 240 MSDGWETSRSR---------------TPGHVDWAIIQLGRGTKHINRVVVDTAHFRGNFP 284
M+DGWET+R PG +WA+ +L I R+ +DT +F GN P
Sbjct: 1 MADGWETARRLDRPPILENDENGILLVPG-CEWAVFRLAHPGV-ITRIEIDTKYFEGNAP 58
Query: 285 QFITVHG-IKTLGESA--------PSHDDSNWICLVDKSKTGPDKEHEY---VINKSLEI 332
V G I T E A P+H W L+ +K P++ H + + I
Sbjct: 59 DSCKVDGCILTTQEEAVIRQKWILPAH---KWKPLLPVTKLSPNQSHLFDSLTLELQDVI 115
Query: 333 THIKLTIIPDGGVKRVRV 350
TH +LTI+PDGGV R+R+
Sbjct: 116 THARLTIVPDGGVSRLRL 133
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,302,001
Number of Sequences: 60738
Number of extensions: 968626
Number of successful extensions: 1999
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1971
Number of HSP's gapped (non-prelim): 6
length of query: 353
length of database: 30,389,216
effective HSP length: 107
effective length of query: 246
effective length of database: 23,890,250
effective search space: 5877001500
effective search space used: 5877001500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)