ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1255 good KLB KOG0526 Chromatin structure and dynamics Nucleosome-binding factor SPN, POB3 subunit
r_klactII1255 good KLB KOG0526 Replication, recombination and repair Nucleosome-binding factor SPN, POB3 subunit
r_klactII1255 good KLB KOG0526 Transcription Nucleosome-binding factor SPN, POB3 subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1255 446132 447796 555
(555 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YML069w [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 765 0.0
SPBC609.05 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 401 e-111
Hs4507241 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 268 2e-71
7291642 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 236 7e-62
CE01414 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 231 2e-60
At3g28730 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 229 8e-60
CE08542 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 221 3e-57
ECU07g1010 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit 108 2e-23
>YML069w [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 552
Score = 765 bits (1976), Expect = 0.0
Identities = 381/559 (68%), Positives = 444/559 (79%), Gaps = 11/559 (1%)
Query: 1 MSTDFDRIYYNQSKLGGRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRG 60
MSTDFDRIY NQSK GRFR+A+ GLGWK S +GGSA+ Q +P LL A E+S+VQWSRG
Sbjct: 1 MSTDFDRIYLNQSKFSGRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRG 60
Query: 61 CRGYELKISTKNKGLIQMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLAR 120
CRGY+LKI+TKN+G+IQ+DGF Q+D+NL+KNDF RRFN+Q+E REHSLRGWNWGK DLAR
Sbjct: 61 CRGYDLKINTKNQGVIQLDGFSQDDYNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLAR 120
Query: 121 NEMVFSLNGKPTFEIPYTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTV 180
NEMVF+LNGKPTFEIPY INNTNLT+KNE+ +EF+ Q+E Y PAGDELVEMR Y+PG +
Sbjct: 121 NEMVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDEEYQPAGDELVEMRFYIPGVI 180
Query: 181 EENEDQDQIMVKDEAEAEDGVKSEVKTEEGSEEPDVQ---EEKTLAEYFYEELRSKADIG 237
+ N D++ M K E + + V K E+G+E DVQ EEK++AE FYEEL+ KADIG
Sbjct: 181 QTNVDEN--MTKKEESSNEVVP---KKEDGAEGEDVQMAVEEKSMAEAFYEELKEKADIG 235
Query: 238 EISGDAIISFQDLFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIH 297
E++GDAI+SFQD+FFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQI RI SLPKADDIH
Sbjct: 236 EVAGDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPKADDIH 295
Query: 298 YLMVLSIDPPIRQGQTSYPFLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHI 357
+L+VL+I+PP+RQGQT+YPFLVLQFQKDEETEVQLN+ED+++E THI
Sbjct: 296 HLLVLAIEPPLRQGQTTYPFLVLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHI 355
Query: 358 VLSHVLKGLTGRRVIVPGEYKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQ 417
VLSHVLKGLT RRVIVPGEYKSKYDQCAVSCS+K NEG+LYPLDNAF FLTKPTLYIPF
Sbjct: 356 VLSHVLKGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLYPLDNAFFFLTKPTLYIPFS 415
Query: 418 DIAAVNISRAGQTSTSARTFDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKNE 477
D++ VNISRAGQTSTS+RTFDLEVV+R+NRG+TTFANISKEEQQLLE FL+SKNLRVKNE
Sbjct: 416 DVSMVNISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEEQQLLEQFLKSKNLRVKNE 475
Query: 478 DKEAEQRLQTAFGXXXXXXXXXINMGSAGEDEES-XXXXXXXXXXXXXXXXXXXXXXXXX 536
D+E ++RLQTA G INMGSAGED+ES
Sbjct: 476 DREVQERLQTALG--SDSDEEDINMGSAGEDDESVDEDFQVSSDNDADEVAEEFDSDAAL 533
Query: 537 XXXXXXXKSERPSKKAKLE 555
ERPSKK K+E
Sbjct: 534 SDAEGGSDEERPSKKPKVE 552
>SPBC609.05 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 512
Score = 401 bits (1030), Expect = e-111
Identities = 211/491 (42%), Positives = 298/491 (59%), Gaps = 41/491 (8%)
Query: 2 STDFDRIYYNQSKLGGRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGC 61
+ +D IY N S+ G+ R+A GLGWK+ + EP L E+ WSR
Sbjct: 5 TVQYDNIYLNLSEKPGKLRIAPSGLGWKSPSLA--------EPFTLPISEIRRFCWSRFA 56
Query: 62 RGYELKISTKNKGLIQMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLARN 121
RGYELKI K+K + +DGF QED + L N ++ F+M +E +E S++GWNWG+ + +
Sbjct: 57 RGYELKIILKSKDPVSLDGFSQEDLDDLINVIKQNFDMGIEQKEFSIKGWNWGEANFLGS 116
Query: 122 EMVFSLNGKPTFEIPYTHINNTNLTAKNEIALEFDTQNEAYNPAG--DELVEMRLYVPGT 179
E+VF +N +P FEIP + + NTNL+ KNE+ALEF T ++ P+ DELVEMRLYVPGT
Sbjct: 117 ELVFDVNSRPAFEIPISAVTNTNLSGKNEVALEFSTTDDKQIPSAQVDELVEMRLYVPGT 176
Query: 180 VEENEDQDQIMVKDEAEAEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEI 239
+ +D A+ E+ E+ A FYE L+ +ADIG+
Sbjct: 177 TAK---------EDAADGEE------------------VEQNAANLFYESLKERADIGQA 209
Query: 240 SGDAIISFQDLFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYL 299
+GDAI+SF ++ TPRGRYDID+Y+ +RLRGKTY+YK+++ IN +F LPK D+ H +
Sbjct: 210 AGDAIVSFSEILLLTPRGRYDIDMYETCMRLRGKTYDYKVEYSSINSLFLLPKPDEQHVV 269
Query: 300 MVLSIDPPIRQGQTSYPFLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHIVL 359
V+ ++PP+RQGQT YPFLV QF +DE+ EV LN+E+ + V+
Sbjct: 270 FVIGLEPPLRQGQTRYPFLVTQFVRDEDMEVDLNIEETVLKEKYADKVKASYDQPAFEVV 329
Query: 360 SHVLKGLTGRRVIVPGEYKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDI 419
S + +GLTGR+V P E+ S AV CSYK NEG LY LD +FLF+ KPTL + DI
Sbjct: 330 SQIFRGLTGRKVTTPAEFLSHEGHAAVKCSYKANEGQLYCLDKSFLFIPKPTLLMNTSDI 389
Query: 420 AAVNISRAGQTSTSARTFDLEVVMRANRGTT-TFANISKEEQQLLETFLRSKNLRVKNE- 477
V +SR G + ++ARTFDL +R+ GT+ F+NI++ EQ L FL SK +++ N+
Sbjct: 390 TRVTLSRVGMSVSAARTFDLTFTLRS--GTSYQFSNINRVEQSALVAFLESKQIKIHNDL 447
Query: 478 DKEAEQRLQTA 488
E +Q L T+
Sbjct: 448 ADETQQTLLTS 458
>Hs4507241 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 709
Score = 268 bits (684), Expect = 2e-71
Identities = 154/461 (33%), Positives = 244/461 (52%), Gaps = 55/461 (11%)
Query: 17 GRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGCRGYELKISTKNKGLI 76
GR RL+ G+ +K S TG + Q A E++ W R G+ LK+ TKN +
Sbjct: 21 GRLRLSRQGIIFKNSKTGKVDNIQ--------AGELTEGIWRRVALGHGLKLLTKNGHVY 72
Query: 77 QMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLARNEMVFSLNGKPTFEIP 136
+ DGF++ +F L + F+ + ++L ++ ++GWNWG + + F + +P FEIP
Sbjct: 73 KYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIP 132
Query: 137 YTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEENEDQDQIMVKDEAE 196
++++ T KNE+ LEF ++A L+E+R YVP T E+ D
Sbjct: 133 LSNVSQCT-TGKNEVTLEFHQNDDAEV----SLMEVRFYVPPTQEDGVDP---------- 177
Query: 197 AEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGDAIISFQDLFFTTPR 256
E F + + SKAD+ + +GDAI F++L TPR
Sbjct: 178 --------------------------VEAFAQNVLSKADVIQATGDAICIFRELQCLTPR 211
Query: 257 GRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVLSIDPPIRQGQTSYP 316
GRYDI IY + L GKT++YK+ + + R+F LP D V+S+DPPI+QGQT Y
Sbjct: 212 GRYDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYH 271
Query: 317 FLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHIVLSHVLKGLTGRRVIVPGE 376
FL+L F KDE+ + LN+ ++E E + ++S V+K L R++ VPG
Sbjct: 272 FLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGN 331
Query: 377 YKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAVNISRAGQTSTSART 436
++ ++CSYK + G LYPL+ F+++ KP ++I F +I+ VN +R +T+ R+
Sbjct: 332 FQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVNFARG---TTTTRS 388
Query: 437 FDLEVVMRANRGTT-TFANISKEEQQLLETFLRSKNLRVKN 476
FD E+ +GT TF++I +EE L F+ +K L +KN
Sbjct: 389 FDFEI--ETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKN 427
>7291642 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 723
Score = 236 bits (602), Expect = 7e-62
Identities = 144/474 (30%), Positives = 234/474 (48%), Gaps = 53/474 (11%)
Query: 17 GRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGCRGYELKISTKNKGLI 76
GR ++ E + +K + TG ++A+++ + + + L++ TK L
Sbjct: 21 GRLKMTEQNIIFKNTKTGKVEQ--------ISAEDIDLINSQKFVGTWGLRVFTKGGVLH 72
Query: 77 QMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLARNEMVFSLNGKPTFEIP 136
+ GF+ + L + ++ ++ +E ++GWNWG + + F K FE+P
Sbjct: 73 RFTGFRDSEHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVP 132
Query: 137 YTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEENEDQDQIMVKDEAE 196
+H++ +T KNE+ LEF ++A P G L+EMR ++P
Sbjct: 133 LSHVSQC-VTGKNEVTLEFHQNDDA--PVG--LLEMRFHIPAV----------------- 170
Query: 197 AEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGDAIISFQDLFFTTPR 256
E +EE V + F++ + SKA + SG++I F+++ TPR
Sbjct: 171 ------------ESAEEDPVDK-------FHQNVMSKASVISASGESIAIFREIQILTPR 211
Query: 257 GRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVLSIDPPIRQGQTSYP 316
GRYDI I+ +L GKT++YK+ + R+F LP D VLS+DPPI+QGQT Y
Sbjct: 212 GRYDIKIFSTFFQLHGKTFDYKIPMDSVLRLFMLPHKDSRQMFFVLSLDPPIKQGQTRYH 271
Query: 317 FLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHIVLSHVLKGLTGRRVIVPGE 376
+LVL F DEET ++L + E + V+ V+K L GR++ PG
Sbjct: 272 YLVLLFAPDEETTIELPFSEAELRDKYEGKLEKEISGPVYEVMGKVMKVLIGRKITGPGN 331
Query: 377 YKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAVNISRAGQTSTSART 436
+ AV CS+K G+LYPL+ F+++ KP L+I F++I++VN +R+G S R+
Sbjct: 332 FIGHSGTAAVGCSFKAAAGYLYPLERGFIYIHKPPLHIRFEEISSVNFARSG---GSTRS 388
Query: 437 FDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKNEDKEAEQRLQTAFG 490
FD EV ++ N F++I KEE L ++ K L V N K+ FG
Sbjct: 389 FDFEVTLK-NGTVHIFSSIEKEEYAKLFDYITQKKLHVSNMGKDKSGYKDVDFG 441
>CE01414 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 697
Score = 231 bits (589), Expect = 2e-60
Identities = 135/463 (29%), Positives = 232/463 (49%), Gaps = 50/463 (10%)
Query: 17 GRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGCRGYELKISTKNKGLI 76
G +L E L +K G S + + ++ ++W + L++ + G
Sbjct: 20 GTLKLTEKSLNFKGDKGGKSVN--------VTGSDIDKLKWQKLGNKPGLRVGLNDGGAH 71
Query: 77 QMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLARNEMVFSLNGKPTFEIP 136
+ GF+ D +++ ++ ++ ++GWN+G+ ++ + FS KP FEIP
Sbjct: 72 RFGGFKDTDLEKIQSFTSSNWSQSIDQSNLFIKGWNYGQAEVKGKTVEFSWEDKPIFEIP 131
Query: 137 YTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEENEDQDQIMVKDEAE 196
T+++N + KNE LEF +++ +L+EMR ++P +E ED D++ E
Sbjct: 132 CTNVSNV-IANKNEAVLEFHQNDDSKV----QLMEMRFHMPIDLENEEDADKV-----EE 181
Query: 197 AEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGDAIISFQDLFFTTPR 256
+ V + E +E+P I D+ TTPR
Sbjct: 182 FKKAVLAYAGLEAETEQP-----------------------------ICLLTDILCTTPR 212
Query: 257 GRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVLSIDPPIRQGQTSYP 316
GRYDI +Y SI L GKTY+YK+ + INR+F +P D H VLS++PPIRQGQT Y
Sbjct: 213 GRYDIKVYPTSIALHGKTYDYKIPIKSINRLFLVPHKDGRHVYFVLSLNPPIRQGQTRYS 272
Query: 317 FLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHIVLSHVLKGLTGRRVIVPGE 376
+L+ +F KDEE +++L + D++ E + +S + K + ++ VPG
Sbjct: 273 YLIFEFGKDEEQDLELALTDEQLE-SSNGNLRRDMTGPIYETISILFKSICNLKITVPGR 331
Query: 377 YKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAVNISRAGQTSTSART 436
+ A+ C+++ N G LYP++ FLF+ KP +YI F++I++ + +R+ + T RT
Sbjct: 332 FLGSSGTPAIQCTHRQNPGLLYPMEKGFLFIHKPAMYIRFEEISSCHFARS-DSGTVTRT 390
Query: 437 FDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKNEDK 479
FD E+ ++ G TF + KEE L +L KN++++N +
Sbjct: 391 FDFEIDLKYG-GPLTFNAMEKEENNKLFDYLNKKNIKIRNSQR 432
>At3g28730 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 646
Score = 229 bits (584), Expect = 8e-60
Identities = 129/460 (28%), Positives = 227/460 (49%), Gaps = 40/460 (8%)
Query: 17 GRFRLAEGGLGWKASATGGSASTQNNEPLLLAADEVSSVQWSRGCRGYELKISTKNKGLI 76
G ++ GG+ WK G + ++ + SV W++ + +L + TK+
Sbjct: 21 GLLKINSGGIQWKKQGGGKAVEVDRSD--------IVSVSWTKVTKSNQLGVKTKDGLYY 72
Query: 77 QMDGFQQEDFNLLKNDFQRRFNMQLEHREHSLRGWNWGKLDLARNEMVFSLNGKPTFEIP 136
+ GF+ +D L + FQ + + ++ S+ G NWG++DL N + F + K FE+
Sbjct: 73 KFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLTFLVGSKQAFEVS 132
Query: 137 YTHINNTNLTAKNEIALEFDTQNEAYNPAGDELVEMRLYVPGTVEENEDQDQIMVKDEAE 196
++ T L KN++ LEF + A D L+E+ ++P + + V DE
Sbjct: 133 LADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQ-------FVGDE-- 183
Query: 197 AEDGVKSEVKTEEGSEEPDVQEEKTLAEYFYEELRSKADIGEISGDAIISFQDLFFTTPR 256
+ ++ F + + + AD+ DA+++F+ + TPR
Sbjct: 184 ----------------------NRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPR 221
Query: 257 GRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKADDIHYLMVLSIDPPIRQGQTSYP 316
GRY+++++ + +RL+G+ ++K+Q+ + R+F LPK++ H +V+S+DPPIR+GQT YP
Sbjct: 222 GRYNVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYP 281
Query: 317 FLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHIVLSHVLKGLTGRRVIVPGE 376
+V+QF+ D E +L++ D+ H V + VL+ L+G ++ PG+
Sbjct: 282 HIVMQFETDTVVESELSISDELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGK 341
Query: 377 YKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAVNISRAGQTSTSART 436
++S D AV S K +G LYPL+ F FL KP I +I V R +
Sbjct: 342 FRSSQDGFAVKSSLKAEDGVLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHY 401
Query: 437 FDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKN 476
FDL + ++ + F NI + E L TF+ SK L++ N
Sbjct: 402 FDLLIRLKTDH-EHLFRNIQRNEYHNLYTFISSKGLKIMN 440
>CE08542 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 689
Score = 221 bits (562), Expect = 3e-57
Identities = 129/440 (29%), Positives = 223/440 (50%), Gaps = 42/440 (9%)
Query: 40 QNNEPLLLAADEVSSVQWSRGCRGYELKISTKNKGLIQMDGFQQEDFNLLKNDFQRRFNM 99
+ + + + +V ++W + L++ + G + GF +D +++ ++
Sbjct: 35 KGGKSVYITGTDVDKLKWQKLGNKPGLRVGLSDGGAHRFGGFLDDDLQKIQSFTSSNWSK 94
Query: 100 QLEHREHSLRGWNWGKLDLARNEMVFSLNGKPTFEIPYTHINNTNLTAKNEIALEFDTQN 159
+ + GWN+G+ D+ + FS +P FEIP T+++N + KNE LEF QN
Sbjct: 95 SINQSNLFINGWNYGQADVKGKNIEFSWENEPIFEIPCTNVSNV-IANKNEAILEFH-QN 152
Query: 160 EAYNPAGDELVEMRLYVPGTVEENEDQDQIMVKDEAEAEDGVKSEVKTEEGSEEPDVQEE 219
E +L+EMR ++P +E ED D++ E + V + E +E+P
Sbjct: 153 EQSKV---QLMEMRFHMPVDLENEEDTDKV-----EEFKKAVLAYAGLEAETEQP----- 199
Query: 220 KTLAEYFYEELRSKADIGEISGDAIISFQDLFFTTPRGRYDIDIYKNSIRLRGKTYEYKL 279
I D+ TTPRGRYDI +Y SI L GKTY+YK+
Sbjct: 200 ------------------------ICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKI 235
Query: 280 QHRQINRIFSLPKADDIHYLMVLSIDPPIRQGQTSYPFLVLQFQKDEETEVQLNVEDDEF 339
+ INR+F +P D VLS++PPIRQGQT Y +L+ +F KDEE +++L++ D++
Sbjct: 236 PVKTINRLFLVPHKDGRQVYFVLSLNPPIRQGQTHYSYLIFEFGKDEEEDLELSLTDEQL 295
Query: 340 EXXXXXXXXXXXXXXTHIVLSHVLKGLTGRRVIVPGEYKSKYDQCAVSCSYKVNEGHLYP 399
+ + +S + K + +V VPG + A+ C+++ N G LYP
Sbjct: 296 D-YFNGNLQREMTGPIYETISILFKSICNLKVTVPGRFLGSSGTPAIQCTHRQNLGLLYP 354
Query: 400 LDNAFLFLTKPTLYIPFQDIAAVNISRAGQTSTSARTFDLEVVMRANRGTTTFANISKEE 459
++ FLF+ KP +YI F++I++ + +R+ + T RTFD E+ ++ + TF+ + KEE
Sbjct: 355 MEKGFLFIQKPVMYIRFEEISSCHFARS-DSGTVTRTFDFEIDLKTG-SSLTFSAMDKEE 412
Query: 460 QQLLETFLRSKNLRVKNEDK 479
L +L K ++++N +
Sbjct: 413 NNKLFDYLNKKEIKIRNSHR 432
>ECU07g1010 [KLB] KOG0526 Nucleosome-binding factor SPN POB3 subunit
Length = 425
Score = 108 bits (271), Expect = 2e-23
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 26/288 (9%)
Query: 193 DEAEAEDGVKSEVKTE-EGSEEPDVQEEKTLAEYFYEELRSKADIGEISGDAIISFQDLF 251
D+ E+ +++E+ E V + KT+ E K D I+ + L
Sbjct: 129 DDIESVVDIRNELSVSLRDMEIRFVSDRKTIEEI-------KGGCSSSVDDEILKMEGLS 181
Query: 252 FTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQINRIFSLPKA--DDIHYLMVLSIDPPIR 309
PRG+++ +++ +RL G +Y++K+ ++ I ++ L K D +V+ DPPIR
Sbjct: 182 LAYPRGKFNFIFFRDYLRLVGSSYDHKIYYKSIKMLYVLEKGYIRDGERYVVIGADPPIR 241
Query: 310 QGQTSYPFLVLQFQKDEETEVQLNVEDDEFEXXXXXXXXXXXXXXTHIVLSHVLKGLTGR 369
QGQT Y +V+ F ++ E +L+V D+ + + + V++ L
Sbjct: 242 QGQTRYDHVVVAF---DDVERELSVSDERLKGEYSGLLSE--------IFAEVMEALCVI 290
Query: 370 RVIVPGEYKSKYDQCAVSCSYKVNEGHLYPLDNAFLFLTKPTLYIPFQDIAAVNISRAGQ 429
+ V ++S+ + C+ K EG LYPLD+ LFL K + + +I+ V SR
Sbjct: 291 KA-VRSSFESRDGMRCLRCAMKAYEGQLYPLDDCMLFLPK-AVRLDLGEISLVEFSRINL 348
Query: 430 TSTSARTFDLEVVMRANRGTTTFANISKEEQQLLETFLRSKNLRVKNE 477
+S A+TFD+ + G TF +SK+E LE + K ++ ++E
Sbjct: 349 SSMQAKTFDMTLFC---EGPYTFNGLSKDEFGALEQYFHGKGIKARSE 393
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,933,154
Number of Sequences: 60738
Number of extensions: 1260268
Number of successful extensions: 4035
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3997
Number of HSP's gapped (non-prelim): 16
length of query: 555
length of database: 30,389,216
effective HSP length: 111
effective length of query: 444
effective length of database: 23,647,298
effective search space: 10499400312
effective search space used: 10499400312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)