ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1266 good U KOG2667 Intracellular trafficking, secretion, and vesicular transport COPII vesicle protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1266 451285 450254 -344
(344 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YML067c [U] KOG2667 COPII vesicle protein 420 e-117
SPBC2G5.04c [U] KOG2667 COPII vesicle protein 159 4e-39
Hs20553406 [U] KOG2667 COPII vesicle protein 128 1e-29
Hs7706105 [U] KOG2667 COPII vesicle protein 125 9e-29
Hs7706278 [U] KOG2667 COPII vesicle protein 108 1e-23
At1g36050 [U] KOG2667 COPII vesicle protein 100 5e-21
At3g22290 [U] KOG2667 COPII vesicle protein 96 8e-20
7290051 [U] KOG2667 COPII vesicle protein 92 8e-19
At1g22200 [U] KOG2667 COPII vesicle protein 85 2e-16
7294304 [U] KOG2667 COPII vesicle protein 82 9e-16
CE12012 [U] KOG2667 COPII vesicle protein 80 3e-15
Hs17435487 [U] KOG2667 COPII vesicle protein 76 6e-14
YAL042w [U] KOG2667 COPII vesicle protein 72 9e-13
SPAC24B11.08c [U] KOG2667 COPII vesicle protein 64 3e-10
CE27226 [U] KOG2667 COPII vesicle protein 58 2e-08
At1g50950 [U] KOG2667 COPII vesicle protein 50 5e-06
At3g20560 [U] KOG2667 COPII vesicle protein 49 8e-06
>YML067c [U] KOG2667 COPII vesicle protein
Length = 352
Score = 420 bits (1079), Expect = e-117
Identities = 198/341 (58%), Positives = 261/341 (76%), Gaps = 13/341 (3%)
Query: 15 KTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTINLDL 74
KT+EQ+ K S+KGGL+S+LTYLFLLFIAW+EFG +FGGYIDQQYVVD Q+++TV IN+D+
Sbjct: 12 KTEEQYKKKSTKGGLTSLLTYLFLLFIAWTEFGEYFGGYIDQQYVVDSQVRDTVQINMDI 71
Query: 75 YVNMACKNIRINARDITGDRGLISENIQMEGMPFYIPVGTRVNEMNNIVSPDLDEILGEA 134
YVN C ++IN RD T DR L+ E +Q+E MPF+IP T+VN++N I++P+LDEILGEA
Sbjct: 72 YVNTKCDWLQINVRDQTMDRKLVLEELQLEEMPFFIPYDTKVNDINEIITPELDEILGEA 131
Query: 135 IPAQFREAIDTSELTGRDD--------FNGCHIFGSVPVNKVKGELHITAHGWGYRSASA 186
IPA+FRE +DT D FNGCH+FGS+PVN+V GEL ITA GY ++
Sbjct: 132 IPAEFREKLDTRSFFDESDPNKAHLPEFNGCHVFGSIPVNRVSGELQITAKSLGYVASRK 191
Query: 187 IPKDQINFNHVINELSFGDFYPYIDNPLDNTAKFS-DEKIKAYYYFTSIVPTLYKKMGAE 245
P +++ FNHVINE SFGDFYPYIDNPLDNTA+F+ DE + Y Y+TS+VPTL+KK+GAE
Sbjct: 192 APLEELKFNHVINEFSFGDFYPYIDNPLDNTAQFNQDEPLTTYVYYTSVVPTLFKKLGAE 251
Query: 246 VDTNQYALSETEY---GESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILS 302
VDTNQY++++ Y ++K +PGIF +Y FEP+ I++SD+R+ F QF++RLVAI S
Sbjct: 252 VDTNQYSVNDYRYLYKDVAAKGDKMPGIFFKYNFEPLSIVVSDVRLSFIQFLVRLVAICS 311
Query: 303 FIVYTASWIFRLVDKSLVLALGPKWSLHYSKDQSPSHGLLD 343
F+VY ASWIF L+D +L+ +GPKWSL Y D + G+LD
Sbjct: 312 FLVYCASWIFTLLDMALITIMGPKWSLRYQPDDK-TKGILD 351
>SPBC2G5.04c [U] KOG2667 COPII vesicle protein
Length = 333
Score = 159 bits (403), Expect = 4e-39
Identities = 99/310 (31%), Positives = 162/310 (51%), Gaps = 11/310 (3%)
Query: 6 MRCISLSPAKTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIK 65
+R P + E ++SS+GG +IL + ++ + +S+ + G +Q+ + D +
Sbjct: 10 IRAFDAFPKFSKEYRRQSSSRGGFFTILLSVLIVVLVFSQCVQYIRGIREQELFIYDSVS 69
Query: 66 ETVTINLDLYVNMACKNIRINARDITGDRGLISENIQMEGMPFYIPVGTRVNEMNNIVSP 125
E + +N+D+ + M C N+RI+ D T D L +E + +E F + T + I
Sbjct: 70 ELMDLNIDITIAMPCSNLRIDVVDRTKDLVLATEALTLEEA-FIKDMPTS----STIYKN 124
Query: 126 DLDEILGEAIPAQFREAIDTSELTGRDDFNGCHIFGSVPVNKVKGELHITAHGWGYRSAS 185
D L A +FR+ + +G C I+G + VN+V G+LHITA GWGY S
Sbjct: 125 DRYAGLRWARTEKFRKKNNAEPGSG----TACRIYGQLVVNRVNGQLHITAPGWGY-GRS 179
Query: 186 AIPKDQINFNHVINELSFGDFYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLYKKMGAE 245
IP +NF H I ELSFG++YP + N LD +++ A+ Y+ S++PT YK
Sbjct: 180 NIPFHSLNFTHYIEELSFGEYYPALVNALDGHYGHANDHPFAFQYYLSVLPTSYKSSFRS 239
Query: 246 VDTNQYALSETE-YGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFI 304
+TNQY+L+E + + PGIFI Y EP+ + + D ++R++AI +
Sbjct: 240 FETNQYSLTENSVVRQLGFGSLPPGIFIDYDLEPLAVRVVDKHPNVASTLLRILAISGGL 299
Query: 305 VYTASWIFRL 314
+ ASWI R+
Sbjct: 300 ITVASWIERV 309
>Hs20553406 [U] KOG2667 COPII vesicle protein
Length = 377
Score = 128 bits (322), Expect = 1e-29
Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 15/312 (4%)
Query: 15 KTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTINLDL 74
K E +V+TS+ GG S++ + + + EF + ++ +Y VD + IN+D+
Sbjct: 21 KVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSSKLRINIDI 80
Query: 75 YVNMACKNIRINARDITGDRGLISENIQMEGMPFYI-PVGTRVNEMNNIVSPDLDE--IL 131
V M C+ + + D+ ++ + E F + P M ++ L E L
Sbjct: 81 TVAMKCQYVGADVLDLAETMVASADGLVYEPTVFDLSPQQKEWQRMLQLIQSRLQEEHSL 140
Query: 132 GEAIPAQFREAIDTSELTGRDDF----NGCHIFGSVPVNKVKGELHITA-----HGWGYR 182
+ I ++ T+ DD N C I G + VNKV G HIT H G+
Sbjct: 141 QDVIFKSAFKSTSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHA 200
Query: 183 SASAIPK-DQINFNHVINELSFGDFYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLYKK 241
+A+ + NF+H I+ LSFG+ P I NPLD T K + + + + YF ++VPT
Sbjct: 201 HLAALVNHESYNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHT 260
Query: 242 MGAEVDTNQYALSETE--YGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVA 299
DT+Q++++E E ++ + GV GIF++Y + + +++ + F+QF +RL
Sbjct: 261 YKISADTHQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCG 320
Query: 300 ILSFIVYTASWI 311
I+ I T +
Sbjct: 321 IVGGIFSTTGML 332
>Hs7706105 [U] KOG2667 COPII vesicle protein
Length = 378
Score = 125 bits (314), Expect = 9e-29
Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 15 KTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTINLDL 74
K E +V+TS+ GG S++ + + + EF + ++ +Y VD + IN+D+
Sbjct: 21 KVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDFSSKLRINIDI 80
Query: 75 YVNMACKNIRINARDITGDRGLISENIQMEGMPFYI-PVGTRVNEMNNIVSPDLDE--IL 131
V M C+ + + D+ ++ + E F + P M ++ L E L
Sbjct: 81 TVAMKCQYVGADVLDLAETMVASADGLVYEPTVFDLSPQQKEWQRMLQLIQSRLQEEHSL 140
Query: 132 GEAIPAQFREAIDTSELTGRDDF----NGCHIFGSVPVNKVKGELHITA-------HGWG 180
+ I ++ T+ DD N C I G + VNKV G HIT G
Sbjct: 141 QDVIFKSAFKSTSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHA 200
Query: 181 YRSASAIPKDQINFNHVINELSFGDFYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLYK 240
+ ++ P + F+H I+ LSFG+ P I NPLD T K + + + + YF ++VPT
Sbjct: 201 HLGSTCQPWNLTIFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLH 260
Query: 241 KMGAEVDTNQYALSETE--YGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLV 298
DT+Q++++E E ++ + GV GIF++Y + + +++ + F+QF +RL
Sbjct: 261 TYKISADTHQFSVTERERIINHAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLC 320
Query: 299 AILSFIVYTASWI 311
I+ I T +
Sbjct: 321 GIVGGIFSTTGML 333
>Hs7706278 [U] KOG2667 COPII vesicle protein
Length = 383
Score = 108 bits (269), Expect = 1e-23
Identities = 90/355 (25%), Positives = 155/355 (43%), Gaps = 54/355 (15%)
Query: 13 PAKTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTINL 72
P ++ VKT G +I++ L +L + SE + + + VD + + IN+
Sbjct: 14 PKTLEDFRVKTCG-GATVTIVSGLLMLLLFLSELQYYLTTEVHPELYVDKSRGDKLKINI 72
Query: 73 D-LYVNMACKNIRINARDITGDR------GLISENIQMEGMPF----------------Y 109
D L+ +M C + I+A D+ G++ L + + +G+P +
Sbjct: 73 DVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEAERHELGKVEVTVF 132
Query: 110 IPVGTRVNEMNNIVSPDLDEILGEAIPAQFREAI----------DTSELTGRDDFN---- 155
P + + + ++I REA DT E R+ F+
Sbjct: 133 DPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQ 192
Query: 156 -----GCHIFGSVPVNKVKGELHITAHGWGYRSA-------SAIPKDQINFNHVINELSF 203
GC ++G + VNKV G H A G ++ + + D IN H I LSF
Sbjct: 193 EQKNEGCQVYGFLEVNKVAGNFHF-APGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSF 251
Query: 204 GDFYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLYKKMGAEV-DTNQYALSETEYGESS 262
G+ YP I NPLD+T + + + YF +VPT+Y K+ EV TNQ++++ E +
Sbjct: 252 GEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANG 311
Query: 263 KA--TGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTASWIFRLV 315
G+PG+F+ Y+ PM + +++ F F+ + AI+ + A I L+
Sbjct: 312 LLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLI 366
>At1g36050 [U] KOG2667 COPII vesicle protein
Length = 416
Score = 99.8 bits (247), Expect = 5e-21
Identities = 55/169 (32%), Positives = 90/169 (52%), Gaps = 11/169 (6%)
Query: 152 DDFNGCHIFGSVPVNKVKGELHITAHGWGYRSAS-------AIPKDQINFNHVINELSFG 204
++ GC+I+G + VNKV G H A G + + A KD N +H IN L++G
Sbjct: 228 EEGEGCNIYGFLEVNKVAGNFHF-APGKSFHQSGVHVHDLLAFQKDSFNISHKINRLTYG 286
Query: 205 DFYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLYKKM-GAEVDTNQYALSE-TEYGESS 262
D++P + NPLD D Y YF +VPT+Y + G + +NQ++++E + E+
Sbjct: 287 DYFPGVVNPLDKVEWSQDTPNAMYQYFIKVVPTVYTDIRGHTIQSNQFSVTEHVKSSEAG 346
Query: 263 KATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTASWI 311
+ +PG+F Y P+K+ ++ I F F+ + AI+ V+T S I
Sbjct: 347 QLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGG-VFTVSGI 394
>At3g22290 [U] KOG2667 COPII vesicle protein
Length = 290
Score = 95.9 bits (237), Expect = 8e-20
Identities = 54/171 (31%), Positives = 86/171 (49%), Gaps = 7/171 (4%)
Query: 153 DFNGCHIFGSVPVNKVKGELHITAHGWGYRSASAI--PKDQINFNHVINELSFGDFYPYI 210
D GC ++G + V +V G HI+ HG A I +N +H+I++LSFG YP I
Sbjct: 110 DGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGI 169
Query: 211 DNPLDNTAKFSDEKIKAYYYFTSIVPTLYKKMGAEV-DTNQYALSETEYGESSKATGVPG 269
NPLD+T + + + Y+ IVPT Y+ + +V TNQY+++E + P
Sbjct: 170 HNPLDDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTPMTEFDRTWPA 229
Query: 270 IFIRYQFEPMKIIISDMRIGFFQFIIRLVAIL----SFIVYTASWIFRLVD 316
++ Y P+ + I + R F I RL A+L + W+FR ++
Sbjct: 230 VYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFIE 280
>7290051 [U] KOG2667 COPII vesicle protein
Length = 441
Score = 92.4 bits (228), Expect = 8e-19
Identities = 85/346 (24%), Positives = 153/346 (43%), Gaps = 50/346 (14%)
Query: 15 KTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGY-IDQQYVVDDQIKETVTINLD 73
K E++ +TS GG S+L+ L ++++ ++E ++ I Q+ D + E V +++D
Sbjct: 26 KVPEKYTETSEIGGTLSLLSRLLIVYLVYTELHYYWHETDIVYQFEPDIALDEQVQMHVD 85
Query: 74 LYVNMACKNIR-INARDITGDRGLISENIQMEGMPFYIPVGTRVN-------------EM 119
+ V M C ++ ++ D T +Q EG+ + + R+ E
Sbjct: 86 ITVAMPCASLSGVDLMDETQQDVFAYGTLQREGVWWEMSEHDRLQFQAIQIQNHYLREEF 145
Query: 120 NNIVSPDLDEILGEAIPAQFREAIDTS-------------ELTGRDD------FNGCHIF 160
+++ +I+ + PA RE+ + +L GR + F+ C +
Sbjct: 146 HSVADVLFKDIMRDNHPA--RESASKAPAAPPPGALPLSVDLHGRHNVQPESKFDACRLH 203
Query: 161 GSVPVNKVKGELHITAHGWGYRSASAIPKDQ---------INFNHVINELSFGDFYPYID 211
G++ +NKV G LH+ G + + +D NF H IN LSFG + I
Sbjct: 204 GTLGINKVAGVLHLVG---GAQPVVGLFEDHWMIELRRMPANFTHRINRLSFGQYSGRIV 260
Query: 212 NPLDNTAKFSDEKIKAYYYFTSIVPTLYKKMGAEVDTNQYALSET--EYGESSKATGVPG 269
PL+ E+ YF +VPT + + QYA++E + + G PG
Sbjct: 261 QPLEGDEIVIHEEATTVQYFLKVVPTEIHQTFTTIYAFQYAVTENVRKLDSERNSYGSPG 320
Query: 270 IFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTASWIFRLV 315
I+ +Y + +KII+ + R F IRL +I+S I+ + I L+
Sbjct: 321 IYFKYDWSALKIIVRNDRDHLVTFAIRLCSIISGIIVISGAINALL 366
>At1g22200 [U] KOG2667 COPII vesicle protein
Length = 383
Score = 84.7 bits (208), Expect = 2e-16
Identities = 82/362 (22%), Positives = 154/362 (41%), Gaps = 81/362 (22%)
Query: 15 KTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTINLDL 74
K +E + + GG+ ++ + + +L + +SE + + Q VD E + IN D+
Sbjct: 16 KINEDFYRRTLSGGVITLASSIVMLILFFSELQLYIHPVTETQLRVDTSRGEKLRINFDV 75
Query: 75 -YVNMACKNIRINARDITGDRGL-ISENIQMEGMPFYIPVGTRVNEMNNIVSPDLDEI-- 130
+ + C I +++ DI+G+R L + +I + R++ N++ D I
Sbjct: 76 TFPALQCSIISLDSMDISGERHLDVRHDI----------IKRRLDSSGNVIEAKQDGIGH 125
Query: 131 --------------------LGEAIPAQ------------FREAI----------DTSEL 148
G A+ REA ++ +
Sbjct: 126 TKIEKPLQKHGGRLEHNETYCGSCFGAEASDDACCNSCEEVREAYRKKGWALSDPESIDQ 185
Query: 149 TGRDDFNGCHIFGSVPVNKVKGELHI----TAHGWGYRSASAIPKDQINFN--HVINELS 202
++ GC++ G + VNKV G H + H G++ + Q N+N H +N L+
Sbjct: 186 VKDEEGEGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQGNYNISHKVNRLA 245
Query: 203 FGDFYPYIDNPLD-----------NTAKFSDEKIKAYYYFTSIVPTLYKKMGAE-VDTNQ 250
FGDF+P + NPLD NT+ D ++ +VP++Y + + +NQ
Sbjct: 246 FGDFFPGVVNPLDGGIRGNRVASINTSSRMDCGVE-----FQVVPSIYTDVHQNTIQSNQ 300
Query: 251 YALSE-TEYGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTAS 309
++++E + E+ + PG+F Y P+K+I + + F F+ + AI+ I +T S
Sbjct: 301 FSVTEHFQNMEAGRMQSPPGVFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGI-FTVS 359
Query: 310 WI 311
I
Sbjct: 360 GI 361
>7294304 [U] KOG2667 COPII vesicle protein
Length = 373
Score = 82.4 bits (202), Expect = 9e-16
Identities = 84/358 (23%), Positives = 148/358 (40%), Gaps = 50/358 (13%)
Query: 6 MRCISLSPAKTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIK 65
+R + P D+ V+T ++ I T + L I + E ++ ++++ VD
Sbjct: 7 LRRLDAYPRTLDDFSVRTVGGAAVTIISTSIISLLI-FLEVLNYMQPTLNEELFVDTTRD 65
Query: 66 ETVTINLDLYV-NMACKNIRINARDITGDRGL------ISENIQMEGMPFYIPVGTRVNE 118
+ INLD+ + N+AC I ++A D +GD L + + G P T + E
Sbjct: 66 HKLRINLDVTLHNLACNYISLDAMDSSGDTHLRVDHDVFKHRLDLNGEPLK---ETPIKE 122
Query: 119 MNNIVSPDLDEILGEAIPAQFRE---------------------AIDTSEL-------TG 150
+ + P+ + G A+ A+D E +
Sbjct: 123 IVAVSPPNKNVTCGSCYGAEHNATHCCNTCEDVLDAYRLRKWTVAVDKIEQCKGKYKRSD 182
Query: 151 RDDFN-GCHIFGSVPVNKVKGELHITAHGWGYRSASAIPKD----QINFNHVINELSFGD 205
D F GC I G + VN++ G H A G + D + +H IN LSFG+
Sbjct: 183 EDAFKEGCRIQGHLEVNRMAGSFHF-APGKSFSIRQFHIHDFQFSNVKLSHTINHLSFGE 241
Query: 206 FYPYID-NPLDNT-AKFSDEKIKAYYYFTSIVPTLYKKM---GAEVDTNQYALSETEYGE 260
+ +PLD ++ K + + Y+ IVPTLY + G + TNQ++++
Sbjct: 242 KIEFAKTHPLDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGEPIYTNQFSVTRYRKDL 301
Query: 261 SSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTASWIFRLVDKS 318
S + G+PGIF Y+ P+ + ++ F F +I+ + A + L++ S
Sbjct: 302 SDRERGMPGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGVFTVAGILAVLLNNS 359
>CE12012 [U] KOG2667 COPII vesicle protein
Length = 380
Score = 80.5 bits (197), Expect = 3e-15
Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 57/347 (16%)
Query: 17 DEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIK-ETVTINLDL- 74
D+ VKT S GGL +++ + ++ + E F + + VD E V I D+
Sbjct: 18 DDFRVKTLS-GGLVTLIATIAIVLLIVLETKQFLSTEVLEHLFVDSTTSDERVHIEFDIT 76
Query: 75 YVNMACKNIRINARDITGDRGLISENIQMEGMPFYI-PVGTRVNEM-------------- 119
+ + C I ++ D++ + ENI + + P G ++E
Sbjct: 77 FTKLPCNFITVDVMDVSSEA---QENINDDIYRLRLDPEGRNISESAQKIEINQNKTSVE 133
Query: 120 ------------------NNIVSPDLDEILGEAIPAQFREAIDTSELTGRD----DFN-- 155
+ I D++ ++ I+ E D +FN
Sbjct: 134 TTDVIQEVKCGSCYGAAADGICCNTCDDVKSAYAVKGWQVNIEEVEQCKNDKWVKEFNEH 193
Query: 156 ---GCHIFGSVPVNKVKGELHITAHGWGYRSASAIPKDQINFN-------HVINELSFGD 205
GC ++G+V V KV G H+ A G +++ + D N + H +N +SFG
Sbjct: 194 KNEGCRVYGTVKVAKVAGNFHL-APGDPHQAMRSHVHDLHNLDPVKFDASHTVNHVSFGK 252
Query: 206 FYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLYKKMGAEVD-TNQYALSETEYGESSKA 264
+P + PLD + Y Y+ +VPT Y + VD ++Q++++ + +
Sbjct: 253 SFPGKNYPLDGKVNTDNRGGIMYQYYVKVVPTRYDYLDGRVDQSHQFSVTTHKKDLGFRQ 312
Query: 265 TGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTASWI 311
+G+PG F++Y+F P+ + + R F F++ L AI+ + A +
Sbjct: 313 SGLPGFFLQYEFSPLMVQYEEFRQSFASFLVSLCAIVGGVFAMAQLV 359
>Hs17435487 [U] KOG2667 COPII vesicle protein
Length = 290
Score = 76.3 bits (186), Expect = 6e-14
Identities = 69/282 (24%), Positives = 119/282 (41%), Gaps = 53/282 (18%)
Query: 27 GGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTINLDLYVNMACKNIRIN 86
G + SI LF+LF+ SE F + + VDD K++ +D+ +N++ N+
Sbjct: 25 GAIISICCCLFILFLFLSELTGFITTEVVNELYVDDPDKDSGG-KIDVSLNISLPNLHCE 83
Query: 87 ARDITGDRGLISENIQMEGMPFYIPVGTRVNEMNNIVSPDLDEILGEAIPAQFREAIDTS 146
+V D+ + +G ID S
Sbjct: 84 -----------------------------------LVGLDIQDEMGRHEVGH----IDNS 104
Query: 147 ELTGRDDFNGCHIFGSVPVNKVKGELHITAHGWGYRSASAIPKDQINFNHVINELSFGDF 206
++ GC G +NKV G H++ H SA+A P++ + HVI++LSFGD
Sbjct: 105 MKIPLNNGAGCRFEGQFSINKVPGNFHVSTH-----SATAQPQNP-DMTHVIHKLSFGDT 158
Query: 207 YPYID-----NPLDNTAKFSDEKIKAYYYFTSIVPTLYK-KMGAEVDTNQYALSETEY-G 259
+ N L + + + ++ Y IVPT+Y+ K G + + QY ++ EY
Sbjct: 159 LQVQNIHGAFNALGGADRLTSNPLASHDYILKIVPTVYEDKSGKQRYSYQYTVANKEYVA 218
Query: 260 ESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAIL 301
S +P I+ RY P+ + ++ R ++FI + AI+
Sbjct: 219 YSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITTICAII 260
>YAL042w [U] KOG2667 COPII vesicle protein
Length = 415
Score = 72.4 bits (176), Expect = 9e-13
Identities = 93/359 (25%), Positives = 140/359 (38%), Gaps = 93/359 (25%)
Query: 14 AKTDEQHVKTSSKGGL---SSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKETVTI 70
AKT+E + GGL S ILT LFLL W +F S Q VVD + +
Sbjct: 13 AKTEEDVRVRTRAGGLITLSCILTTLFLLVNEWGQFNSVV---TRPQLVVDRDRHAKLEL 69
Query: 71 NLDL-YVNMACKNIRINARDITG-------DRGLISENIQMEGMPF----YIPVGTR--- 115
N+D+ + +M C + ++ D +G D G + EG P + VG
Sbjct: 70 NMDVTFPSMPCDLVNLDIMDDSGEMQLDILDAGFTMSRLNSEGRPVGDATELHVGGNGDG 129
Query: 116 ---VNEMNNIVSP-------DLDEILGE----------AIPAQFREA---------IDTS 146
VN N P +E L + A+ + + EA I+
Sbjct: 130 TAPVNNDPNYCGPCYGAKDQSQNENLAQEEKVCCQDCDAVRSAYLEAGWAFFDGKNIEQC 189
Query: 147 ELTG-----RDDFN-GCHIFGSVPVNKVKGELHIT-------AHGWGYRSASAIPKDQIN 193
E G + N GC I GS +N+++G LH A+G + ++ +N
Sbjct: 190 EREGYVSKINEHLNEGCRIKGSAQINRIQGNLHFAPGKPYQNAYGHFHDTSLYDKTSNLN 249
Query: 194 FNHVINELSFGDFYP----------------YIDNPLDNTAKFSDEK--IKAYYYFTSIV 235
FNH+IN LSFG +PLD F D + YF IV
Sbjct: 250 FNHIINHLSFGKPIQSHSKLLGNDKRHGGAVVATSPLDGRQVFPDRNTHFHQFSYFAKIV 309
Query: 236 PTLYKKM-GAEVDTNQYAL---SETEYGESSK--------ATGVPGIFIRYQFEPMKII 282
PT Y+ + ++T Q++ S G K G+PG+F+ ++ P+K+I
Sbjct: 310 PTRYEYLDNVVIETAQFSATFHSRPLAGGRDKDHPNTLHVRGGIPGMFVFFEMSPLKVI 368
>SPAC24B11.08c [U] KOG2667 COPII vesicle protein
Length = 390
Score = 63.9 bits (154), Expect = 3e-10
Identities = 56/194 (28%), Positives = 88/194 (44%), Gaps = 28/194 (14%)
Query: 147 ELTGRDDFNGCHIFGSVPVNKVKGELHITAHGWGYRSASA---IPKDQIN------FNHV 197
EL GC++ G + VN++ G HI A G ++ + +D IN +H
Sbjct: 187 ELYEAQKVEGCNLAGQLSVNRMAGNFHI-APGRSTQNGNQHVHDTRDYINELDLHDMSHS 245
Query: 198 INELSFG---DFYPYIDNPLDNTAKFSDEKIKAYYYFTSIVPTLY---KKMGAEVDTNQY 251
I+ LSFG D + NPLD T K Y YF V + K +DTN+Y
Sbjct: 246 IHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFMPLSKSTLPIDTNKY 305
Query: 252 ALSETEY----GESSKAT-------GVPGIFIRYQFEPMKIIISDMRIGFF-QFIIRLVA 299
A+++ E G K G+PG++ ++ PM++I +R F F+ ++A
Sbjct: 306 AVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQVRGNTFGGFLSNVLA 365
Query: 300 ILSFIVYTASWIFR 313
+L V AS++ R
Sbjct: 366 LLGGCVTLASFVDR 379
>CE27226 [U] KOG2667 COPII vesicle protein
Length = 286
Score = 57.8 bits (138), Expect = 2e-08
Identities = 57/299 (19%), Positives = 124/299 (41%), Gaps = 66/299 (22%)
Query: 15 KTDEQHVKTSSKGGLSSILTYLFLLFIAWSEFGSFFGGYIDQQYVVDDQIKE---TVTIN 71
K + + ++ G + SIL LF+ F+ +++ ++ + ++ +DD +E V +N
Sbjct: 12 KVPKDLTQPTTVGAVISILCVLFISFMIFNDILAYIFIDLRSEFFIDDPGREGKIDVQVN 71
Query: 72 LDLYVNMACKNIRINARDITGDRGLISENIQMEGMPFYIPVGTRVNEMNNIVSPDLDEIL 131
+ + +MAC+ + ++ +D G VG V++ N + D
Sbjct: 72 VS-FPHMACEYLGVDIQDENGRH----------------EVGF-VDQTNKVSIGD----- 108
Query: 132 GEAIPAQFREAIDTSELTGRDDFNGCHIFGSVPVNKVKGELHITAHGWGYRSASAIPKDQ 191
GC +NKV G H++ H ++A +
Sbjct: 109 -----------------------GGCRFESRFEINKVPGNFHLSTH------SAATQPES 139
Query: 192 INFNHVINELSFGDFYPYID-----NPLDNTAKFSDEKIKAYYYFTSIVPTLYKK-MGAE 245
+ H+I+ + FGD + + +PL + + + Y IVP++++ G
Sbjct: 140 YDMRHLIHSIKFGDDVSHKNLKGSFDPLAKRNTSQENGLNTHEYILKIVPSVHEDYSGTI 199
Query: 246 VDTNQYAL---SETEYGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAIL 301
+++ QY S Y S K +P ++ +Y+ +P+ + ++ R F+ F+ + A++
Sbjct: 200 LNSYQYTFGHKSYITYHHSGKI--IPAVWFKYELQPITLKQTEQRQSFYAFLTSICAVV 256
>At1g50950 [U] KOG2667 COPII vesicle protein
Length = 451
Score = 50.1 bits (118), Expect = 5e-06
Identities = 40/172 (23%), Positives = 69/172 (39%), Gaps = 23/172 (13%)
Query: 156 GCHIFGSVPVNKVKGELHITAHGWGYRSASAIPKDQINFNHVINELSFGD---------- 205
GC I G V KV GEL I+AH A + Q+N +H++ L+FG
Sbjct: 261 GCRIEGYVRAKKVPGELVISAHS----GAHSFDASQMNMSHIVTHLTFGTMVSERLWTDM 316
Query: 206 --FYPYIDNPLD--NTAKFSDEK-----IKAYYYFTSIVPTLYKKMGAEVDTNQYALSET 256
PY+ D N F +E+ + +Y I + + + + T
Sbjct: 317 KRLLPYLGQSYDRLNGKSFINERQLDANVTIEHYLQIIKTEVISRRSGQEHSLIEEYEYT 376
Query: 257 EYGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTA 308
+ +++ P ++ PM+++IS+ F FI + AI+ + A
Sbjct: 377 AHSSVARSYHYPEAKFHFELSPMQVLISENPKSFSHFITNVCAIIGGVFTVA 428
>At3g20560 [U] KOG2667 COPII vesicle protein
Length = 593
Score = 49.3 bits (116), Expect = 8e-06
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 23/172 (13%)
Query: 156 GCHIFGSVPVNKVKGELHITAHGWGYRSASAIPKDQINFNHVINELSFG----------- 204
GC + G V V KV G L I+AH A + Q+N +HV++ SFG
Sbjct: 403 GCRVEGYVRVKKVPGNLVISAHS----GAHSFDSSQMNMSHVVSHFSFGRMISPRLLTDM 458
Query: 205 -DFYPYI---DNPLDNTAKFSDEKIKAYYYFTSIVPTLYKKMGAEVDTNQYALSE----T 256
PY+ + LD A + + A + T+ ++ +++L E T
Sbjct: 459 KRLLPYLGLSHDRLDGKAFINQHEFGANVTIEHYLQTVKTEVITRRSGQEHSLIEEYEYT 518
Query: 257 EYGESSKATGVPGIFIRYQFEPMKIIISDMRIGFFQFIIRLVAILSFIVYTA 308
+ ++ +P ++ PM+I+I++ F FI L AI+ + A
Sbjct: 519 AHSSVAQTYYLPVAKFHFELSPMQILITENPKSFSHFITNLCAIIGGVFTVA 570
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.139 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,615,413
Number of Sequences: 60738
Number of extensions: 864611
Number of successful extensions: 1851
Number of sequences better than 1.0e-05: 17
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1803
Number of HSP's gapped (non-prelim): 22
length of query: 344
length of database: 30,389,216
effective HSP length: 107
effective length of query: 237
effective length of database: 23,890,250
effective search space: 5661989250
effective search space used: 5661989250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)