ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1312 good L KOG2875 Replication, recombination and repair 8-oxoguanine DNA glycosylase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1312 466882 468072 397
(397 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YML060w [L] KOG2875 8-oxoguanine DNA glycosylase 286 3e-77
Hs4505495 [L] KOG2875 8-oxoguanine DNA glycosylase 145 1e-34
Hs8670530 [L] KOG2875 8-oxoguanine DNA glycosylase 138 2e-32
Hs8670540 [L] KOG2875 8-oxoguanine DNA glycosylase 137 4e-32
Hs8670534 [L] KOG2875 8-oxoguanine DNA glycosylase 137 4e-32
Hs8670542 [L] KOG2875 8-oxoguanine DNA glycosylase 136 5e-32
Hs8670532 [L] KOG2875 8-oxoguanine DNA glycosylase 136 5e-32
At1g21710 [L] KOG2875 8-oxoguanine DNA glycosylase 129 6e-30
7290964 [L] KOG2875 8-oxoguanine DNA glycosylase 125 1e-28
Hs8670536 [L] KOG2875 8-oxoguanine DNA glycosylase 89 9e-18
ECU08g0770 [L] KOG2875 8-oxoguanine DNA glycosylase 76 1e-13
Hs8670538 [L] KOG2875 8-oxoguanine DNA glycosylase 60 7e-09
>YML060w [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 376
Score = 286 bits (733), Expect = 3e-77
Identities = 161/346 (46%), Positives = 219/346 (62%), Gaps = 18/346 (5%)
Query: 3 GKLFFQPGELVLRNSLHCGQSFRWVIQEHTGFFYSTLKL--DDSYDLVMLRQLDDN-CIE 59
GKL EL L N L GQSFRW+ E + +T+K+ + Y +V+LRQ ++N +E
Sbjct: 6 GKLAINKSELCLANVLQAGQSFRWIWDEKLNQYSTTMKIGQQEKYSVVILRQDEENEILE 65
Query: 60 Y----DCYKRANLEKLESHLKDYFELDVSLNNLMTQ-WSDADPKGFQNKEHRGVRVLNQN 114
+ DC N + L++HL YF LDVSL +L W +D K F +G+R+L Q
Sbjct: 66 FVAVGDC---GNQDALKTHLMKYFRLDVSLKHLFDNVWIPSD-KAFAKLSPQGIRILAQE 121
Query: 115 PWETLCSFXXXXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKL 174
PWETL SF T+MC+SL + FG+ I DG +SFP+S+++ RA+E KL
Sbjct: 122 PWETLISFICSSNNNISRITRMCNSLCSNFGNLITTIDGVAYHSFPTSEELTSRATEAKL 181
Query: 175 RDLGFGYRAKYIIGTAQLMSMEKGD---MSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVG 231
R+LGFGYRAKYII TA+ + +K + SD+ Y+ S I Y+DV+E LM+Y GVG
Sbjct: 182 RELGFGYRAKYIIETARKLVNDKAEANITSDTTYLQS--ICKDAQYEDVREHLMSYNGVG 239
Query: 232 PKVADCVLLMGGLGFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVN 291
PKVADCV LM GL D +VPVDVH++RIA RDY+++ K + EL+ +Y LPI+RKK+N
Sbjct: 240 PKVADCVCLM-GLHMDGIVPVDVHVSRIAKRDYQISANKNHLKELRTKYNALPISRKKIN 298
Query: 292 YELDMYRRKLQDLWGPYAGWAQCVLFAQEIGKTVGASTSDKLVKRR 337
ELD R L WG YAGWAQ VLF++EIG T G++T+ + KR+
Sbjct: 299 LELDHIRLMLFKKWGSYAGWAQGVLFSKEIGGTSGSTTTGTIKKRK 344
>Hs4505495 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 345
Score = 145 bits (365), Expect = 1e-34
Identities = 111/334 (33%), Positives = 161/334 (47%), Gaps = 33/334 (9%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGL 244
Y+ +A+ + E+G ++ + + + Y++ + L PGVG KVADC+ LM L
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTKVADCICLM-AL 259
Query: 245 GFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDL 304
+ VPVDVH+ IA RDY + T + + N EL + R L
Sbjct: 260 DKPQAVPVDVHMWHIAQRDYSWHPTTSQAKG----------PSPQTNKELGNFFR---SL 306
Query: 305 WGPYAGWAQCVLFAQEIGKTVGASTSDKLVKRRK 338
WGPYAGWAQ VLF+ ++ ++ A + KRRK
Sbjct: 307 WGPYAGWAQAVLFSADLRQSRHA--QEPPAKRRK 338
>Hs8670530 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 324
Score = 138 bits (347), Expect = 2e-32
Identities = 104/311 (33%), Positives = 148/311 (47%), Gaps = 31/311 (9%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGL 244
Y+ +A+ + E+G ++ + + + Y++ + L PGVG KVADC+ LM L
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTKVADCICLM-AL 259
Query: 245 GFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDL 304
+ VPVDVH+ IA RDY + T + + N EL + R L
Sbjct: 260 DKPQAVPVDVHMWHIAQRDYSWHPTTSQAKG----------PSPQTNKELGNFFR---SL 306
Query: 305 WGPYAGWAQCV 315
WGPYAGWAQ V
Sbjct: 307 WGPYAGWAQAV 317
>Hs8670540 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 356
Score = 137 bits (344), Expect = 4e-32
Identities = 103/311 (33%), Positives = 148/311 (47%), Gaps = 31/311 (9%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGL 244
Y+ +A+ + E+G ++ + + + Y++ + L PGVG KVADC+ LM L
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTKVADCICLM-AL 259
Query: 245 GFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDL 304
+ VPVDVH+ IA RDY + T + + N EL + R L
Sbjct: 260 DKPQAVPVDVHMWHIAQRDYSWHPTTSQAKG----------PSPQTNKELGNFFR---SL 306
Query: 305 WGPYAGWAQCV 315
WGPYAGWAQ +
Sbjct: 307 WGPYAGWAQAL 317
>Hs8670534 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 424
Score = 137 bits (344), Expect = 4e-32
Identities = 104/312 (33%), Positives = 148/312 (47%), Gaps = 31/312 (9%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGL 244
Y+ +A+ + E+G ++ + + + Y++ + L PGVG KVADC+ LM L
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTKVADCICLM-AL 259
Query: 245 GFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDL 304
+ VPVDVH+ IA RDY + T + + N EL + R L
Sbjct: 260 DKPQAVPVDVHMWHIAQRDYSWHPTTSQAKG----------PSPQTNKELGNFFR---SL 306
Query: 305 WGPYAGWAQCVL 316
WGPYAGWAQ L
Sbjct: 307 WGPYAGWAQAGL 318
>Hs8670542 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 322
Score = 136 bits (343), Expect = 5e-32
Identities = 103/309 (33%), Positives = 147/309 (47%), Gaps = 31/309 (10%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGL 244
Y+ +A+ + E+G ++ + + + Y++ + L PGVG KVADC+ LM L
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTKVADCICLM-AL 259
Query: 245 GFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDL 304
+ VPVDVH+ IA RDY + T + + N EL + R L
Sbjct: 260 DKPQAVPVDVHMWHIAQRDYSWHPTTSQAKG----------PSPQTNKELGNFFR---SL 306
Query: 305 WGPYAGWAQ 313
WGPYAGWAQ
Sbjct: 307 WGPYAGWAQ 315
>Hs8670532 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 410
Score = 136 bits (343), Expect = 5e-32
Identities = 103/309 (33%), Positives = 147/309 (47%), Gaps = 31/309 (10%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGL 244
Y+ +A+ + E+G ++ + + + Y++ + L PGVG KVADC+ LM L
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTKVADCICLM-AL 259
Query: 245 GFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDL 304
+ VPVDVH+ IA RDY + T + + N EL + R L
Sbjct: 260 DKPQAVPVDVHMWHIAQRDYSWHPTTSQAKG----------PSPQTNKELGNFFR---SL 306
Query: 305 WGPYAGWAQ 313
WGPYAGWAQ
Sbjct: 307 WGPYAGWAQ 315
>At1g21710 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 365
Score = 129 bits (325), Expect = 6e-30
Identities = 110/337 (32%), Positives = 158/337 (46%), Gaps = 36/337 (10%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLD-DNCIEYDCYKRANLE 69
EL L + GQ+FRW + TG + + LV LRQ D+ + Y + + +
Sbjct: 49 ELTLPLTFPTGQTFRW---KKTGAIQYSGTIGPH--LVSLRQRPGDDAVSYCVHCSTSPK 103
Query: 70 KLESHLKDYFELDVSLNNLMTQWSDADPKGFQNKEH-RGVRVLNQNPWETLCSFXXXXXX 128
E L D+ ++SL L + +S DP+ + H RG RVL Q+P E L F
Sbjct: 104 SAELALLDFLNAEISLAELWSDFSKKDPRFGELARHLRGARVLRQDPLECLIQFLCSSNN 163
Query: 129 XXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAKYIIG 188
TKM + G + + DG + + FPS D++ R SEE+ R GFGYRAKYI G
Sbjct: 164 NIARITKMV-DFVSSLGLHLGDIDGFEFHQFPSLDRL-SRVSEEEFRKAGFGYRAKYITG 221
Query: 189 TAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGLGFDE 248
T + + G +E++LS R K+ Q+ L PGVGPKVA C+ L L
Sbjct: 222 TVNALQAKPG--GGNEWLLSLR---KVELQEAVAALCTLPGVGPKVAACIALF-SLDQHS 275
Query: 249 VVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDLWGPY 308
+PVD H+ +IA+ + L + +T K + + K +G Y
Sbjct: 276 AIPVDTHVWQIAT------------NYLLPDLAGAKLTPKLHGRVAEAFVSK----YGEY 319
Query: 309 AGWAQCVLFAQEI--GKTVGASTSDKLVKRRKLDYDA 343
AGWAQ +LF E+ KT+ S S + KLD A
Sbjct: 320 AGWAQTLLFIAELPAQKTLLQSFSQPI---NKLDESA 353
>7290964 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 327
Score = 125 bits (313), Expect = 1e-28
Identities = 101/327 (30%), Positives = 153/327 (45%), Gaps = 37/327 (11%)
Query: 11 ELVLRNSLHCGQSFRW-VIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYKRAN-- 67
E L +L GQSFRW I + Y + + + L Q +++ I Y+ Y ++
Sbjct: 17 ECDLERTLLGGQSFRWRSICDGNRTKYGGVVFNTYWVL----QQEESFITYEAYGTSSPL 72
Query: 68 -LEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQNKEHRGVRVLNQNPWETLCSFXXXX 126
+ S + DY +D L W D F + VR+L+Q P+E + SF
Sbjct: 73 ATKDYSSLISDYLRVDFDLKVNQKDWLSKDDN-FVKFLSKPVRLLSQEPFENIFSFLCSQ 131
Query: 127 XXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEE---KLRDLGFGYRA 183
+ M FG +I F+GA Y+FP+ ++ + E+ +LR FGYRA
Sbjct: 132 NNNIKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRAAKFGYRA 191
Query: 184 KYIIGTAQLMSMEKGDMSDSEYMLSWRIKGK-MGYQDVKEKLMAYPGVGPKVADCVLLMG 242
K+I T Q + + G +W I K M ++ +E+L PG+G KVADC+ LM
Sbjct: 192 KFIAQTLQEIQKKGGQ--------NWFISLKSMPFEKAREELTLLPGIGYKVADCICLM- 242
Query: 243 GLGFDEVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQ 302
+G E VPVD+HI RIA Y + T Q+ KK+ E+ + +KL
Sbjct: 243 SMGHLESVPVDIHIYRIAQNYYLPHLTGQK------------NVTKKIYEEVSKHFQKLH 290
Query: 303 DLWGPYAGWAQCVLFAQEIGKTVGAST 329
G YAGWAQ +LF+ ++ + ST
Sbjct: 291 ---GKYAGWAQAILFSADLSQFQNTST 314
>Hs8670536 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 357
Score = 89.4 bits (220), Expect = 9e-18
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAK 184
T M L FG + + D + FPS + E LR LG GYRA+
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRAR 206
Query: 185 YIIGTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPK 233
Y+ +A+ + E+G ++ + + + Y++ + L PGVG K
Sbjct: 207 YVSASARAILEEQGGLAWLQQL------RESSYEEAHKALCILPGVGTK 249
>ECU08g0770 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 290
Score = 75.9 bits (185), Expect = 1e-13
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 43/254 (16%)
Query: 69 EKLESHLKDYFELDVSLNNLMTQWSDADPKGFQNKEH-RGVRVLNQNPWETLCSFXXXXX 127
E +E + +F L+++L L+ W GF G+R L T+ SF
Sbjct: 67 EDVEVDISYFFTLEINLRPLLQMW------GFDTDGSLAGLRALRYALVPTIFSFICSSN 120
Query: 128 XXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPSSDQIVERASEEKLRDLGFGYRAKYII 187
TKM L ++ G+ I ++ G + FPS +++V E +LR GFGYR++YI
Sbjct: 121 NNISRITKMVGFLYSK-GEFIMKYKGLDFHHFPSLEKLV--GIEGELRANGFGYRSRYIC 177
Query: 188 GTAQLMSMEKGDMSDSEYMLSWRIKGKMGYQDVKEKLMAYPGVGPKVADCVLLMGGLGFD 247
A+ + ME R++ G +D+ +++ GVG K+ADC+LL+ GLG
Sbjct: 178 SAAEYL-MENYP----------RLQQASGVRDM---MVSIKGVGDKIADCILLI-GLGNL 222
Query: 248 EVVPVDVHIARIASRDYKLNNTKQEISELQAEYKKLPITRKKVNYELDMYRRKLQDLWGP 307
VVPVD HI R + + + + T ++ Y +R ++ +G
Sbjct: 223 SVVPVDTHIFRHSRKLFGVRGK----------------TLRRGMY--GTVQRLYRERFGE 264
Query: 308 YAGWAQCVLFAQEI 321
YAG AQ +F + +
Sbjct: 265 YAGVAQLYIFKKMV 278
>Hs8670538 [L] KOG2875 8-oxoguanine DNA glycosylase
Length = 195
Score = 59.7 bits (143), Expect = 7e-09
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 11 ELVLRNSLHCGQSFRWVIQEHTGFFYSTLKLDDSYDLVMLRQLDDNCIEYDCYK----RA 66
EL L L GQSFRW +E + +S + D + L + +C Y K R
Sbjct: 32 ELRLDLVLPSGQSFRW--REQSPAHWSGVLADQVWTLTQTEE-QLHCTVYRGDKSQASRP 88
Query: 67 NLEKLESHLKDYFELDVSLNNLMTQWSDADPKGFQN--KEHRGVRVLNQNPWETLCSFXX 124
++LE+ ++ YF+LDV+L L W D FQ ++ +GVR+L Q+P E L SF
Sbjct: 89 TPDELEA-VRKYFQLDVTLAQLYHHWGSVDSH-FQEVAQKFQGVRLLRQDPIECLFSFIC 146
Query: 125 XXXXXXXXXTKMCHSLATEFGDEIAEFDGAKQYSFPS 161
T M L FG + + D + FPS
Sbjct: 147 SSNNNIARITGMVERLCQAFGPRLIQLDDVTYHGFPS 183
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,377,395
Number of Sequences: 60738
Number of extensions: 908575
Number of successful extensions: 2425
Number of sequences better than 1.0e-05: 12
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2368
Number of HSP's gapped (non-prelim): 12
length of query: 397
length of database: 30,389,216
effective HSP length: 108
effective length of query: 289
effective length of database: 23,829,512
effective search space: 6886728968
effective search space used: 6886728968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)