ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1404 good A KOG1801 RNA processing and modification tRNA-splicing endonuclease positive effector (SEN1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1404 500990 495000 -1997
(1997 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector... 1649 0.0
SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive ef... 512 e-144
SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effe... 498 e-140
At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effect... 310 2e-83
At4g30100 [A] KOG1801 tRNA-splicing endonuclease positive effect... 290 1e-77
At2g19120 [A] KOG1801 tRNA-splicing endonuclease positive effect... 287 1e-76
Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effect... 246 2e-64
YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 214 9e-55
At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor... 214 1e-54
SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing fac... 202 4e-51
CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 201 1e-50
At1g65810 [A] KOG1801 tRNA-splicing endonuclease positive effect... 201 1e-50
Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 187 1e-46
At5g37160 [A] KOG1801 tRNA-splicing endonuclease positive effect... 187 2e-46
7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector... 178 7e-44
At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effect... 172 5e-42
At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effect... 169 5e-41
At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effect... 167 1e-40
At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effect... 166 3e-40
At2g03270 [L] KOG1803 DNA helicase 162 5e-39
At4g15570 [A] KOG1801 tRNA-splicing endonuclease positive effect... 161 1e-38
At5g37140 [A] KOG1801 tRNA-splicing endonuclease positive effect... 160 3e-38
ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 158 1e-37
At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effect... 155 6e-37
YKL017c [L] KOG1803 DNA helicase 153 3e-36
At5g35970 [L] KOG1803 DNA helicase 150 2e-35
SPCC737.07c [L] KOG1803 DNA helicase 146 3e-34
Hs4504623 [L] KOG1803 DNA helicase 145 6e-34
CE19303 [L] KOG1803 DNA helicase 143 3e-33
YER176w [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 132 4e-30
Hs20470741 [L] KOG1805 DNA replication helicase 120 2e-26
YHR164c [L] KOG1805 DNA replication helicase 112 8e-24
Hs21703358_3 [A] KOG1804 RNA helicase 109 5e-23
Hs14769950_3 [A] KOG1804 RNA helicase 109 5e-23
7291108 [L] KOG1805 DNA replication helicase 108 7e-23
7301121 [L] KOG1807 Helicases 108 9e-23
7292369_2 [A] KOG1804 RNA helicase 107 1e-22
Hs14211540 [A] KOG1804 RNA helicase 107 3e-22
At1g08840 [L] KOG1805 DNA replication helicase 105 1e-21
7299528 [L] KOG1806 DEAD box containing helicases 102 8e-21
CE08664 [L] KOG1803 DNA helicase 101 1e-20
ECU05g1110 [L] KOG1803 DNA helicase 99 7e-20
Hs14750549 [L] KOG1806 DEAD box containing helicases 99 9e-20
Hs20162560 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 97 2e-19
CE24674 [L] KOG1806 DEAD box containing helicases 97 3e-19
CE06677 [L] KOG1807 Helicases 96 4e-19
At2g38770 [L] KOG1806 DEAD box containing helicases 96 4e-19
Hs14786304_1 [L] KOG1807 Helicases 96 4e-19
At1g05460 [A] KOG1804 RNA helicase 96 6e-19
SPBC16D10.04c [L] KOG1805 DNA replication helicase 96 8e-19
Hs14251207_2 [A] KOG1804 RNA helicase 96 8e-19
7303245 [A] KOG1804 RNA helicase 90 3e-17
CE23725 [L] KOG1805 DNA replication helicase 86 5e-16
CE02219 [L] KOG1805 DNA replication helicase 86 5e-16
CE18803 [L] KOG1803 DNA helicase 84 2e-15
Hs7661884 [A] KOG1804 RNA helicase 83 5e-15
CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector... 83 5e-15
CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector... 79 7e-14
CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector... 79 7e-14
7302834 [A] KOG1804 RNA helicase 78 1e-13
SPCC1739.03 [L] KOG1807 Helicases 76 5e-13
CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector... 68 2e-10
7292718 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 66 6e-10
CE01610 [A] KOG1801 tRNA-splicing endonuclease positive effector... 63 5e-09
7294354 [A] KOG1804 RNA helicase 62 1e-08
>YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 2231
Score = 1649 bits (4269), Expect = 0.0
Identities = 865/1883 (45%), Positives = 1222/1883 (63%), Gaps = 57/1883 (3%)
Query: 9 DPQIRSVILPFKNKI--LDSLADRVGPDFEELSLVTKVVETVGPLIHDKNYHFFCDPDLG 66
D Q+ +V K+ I ++ + P+ +E L+ ++++ + + K H FCDP L
Sbjct: 28 DVQLATVYTKAKSYIPQIEQVYQGTNPNIQEAKLLGELLQVLAEV--PKGTHLFCDPILE 85
Query: 67 PVISFLVIIFSVPREQQAIQWYCDKFSPILASCPNCSQAFFSYKNQIIQRYIVNKGIAYS 126
P+ F + IFS E A W + F+PIL+ C C F K +++Q + + + + +
Sbjct: 86 PISIFSLTIFSFNEEATAT-WLKNHFNPILSVCDKCILNFARGKCKMLQHFAIQRHVPHE 144
Query: 127 NIDGFDLMICRWRSDTLIKRLGSIKSKD-----LSNEQKIAFTECFWYPRVLKHSQSLKV 181
++ F+ ++C+WR + + L +I D ++NE + A EC P +L+ ++ LK
Sbjct: 145 HVAKFNDIVCQWRVEAVFPILRNISVNDNTGINITNEIETAMYECLCNPHMLRLNKQLKA 204
Query: 182 LFNNAFDILVREKSPLLEYSSDNSLSALTAGSVFMLMEGTPAQISWALGLLDWLYERNYK 241
F F K LL+ ++ S+ +G +F EG+ + W+ L LY RN+
Sbjct: 205 TFEAIFKFFYDTKHRLLDVTNPLSIKTFISGVIFCWCEGSKEENEWSRAFLKDLYSRNFH 264
Query: 242 ITVENLPLGALQEVNTHYIYLISKQFGKDQQHNINSLNSMAIA--WIRLTALFSLMTKEV 299
I + NL ++EV H ++L N + + ++ W RL +F+L K+V
Sbjct: 265 INLSNLTPDIIEEVYIHILFL----------QNPANWTEIVVSQFWSRLLPVFNLFDKDV 314
Query: 300 LELHFLVPKFTRSLKNAGTMDVPSIIHLWYNWFSVPDPARPLDVMLKVLSLFLEKFGQDF 359
+F VPK SLK + I +WYN S +PLD +L+ L++FL KFG +F
Sbjct: 315 FIEYFQVPKNVESLKKTFKFPLEPIFKMWYNHLSKSYHDKPLDFLLRGLTMFLNKFGSEF 374
Query: 360 WLYLKPFNFHTLLDLIFAQGTFANTLLRKQDFPILRDGKETWLSLTGSISDLITWCIPFY 419
W ++PF FH++LD+IF + +F L++ QD PI+ E + LTGS++DL++W +PFY
Sbjct: 375 WSKIEPFTFHSILDIIFNRDSFPIKLIKIQDNPIVEHQTEVYFQLTGSVTDLLSWTLPFY 434
Query: 420 NSLSSAKKMQMVKKISTGFLMTICECNKMLQTXXXXXXXXXXXXXXNNVLEIDDKKRALL 479
++LS +K++QMV+K+S FL I L++ VL I + +RA+L
Sbjct: 435 HALSPSKRIQMVRKVSMAFLRIIANYPS-LKSIPKACLMNSATALLRAVLTIKENERAML 493
Query: 480 YTNSDLQNELLTVADCRKVVNHLKISQLLCDTVQAPDKVFPGMQVDALSL--NAMKVLSH 537
Y N + + LLT D R ++N+ I ++ + P+ +PG+ + S+ + M VL+
Sbjct: 494 YKNDEFETVLLTKTDSRALLNNPLIQDIIIRSASNPNDFYPGLGAASASVATSTMMVLAE 553
Query: 538 CIEYDILNLCETTFKLYTGGSVNKHHILDLDMKRFFLNPLVHSLNLMSLGSNGPKHVLHI 597
CI++DIL LC TFKLY+G ++ ++ + L + + ++L S +GP +
Sbjct: 554 CIDFDILLLCHRTFKLYSGKPIS-----EIPISTNVLENVTNKIDLRSF-HDGPLLAKQL 607
Query: 598 MTALTNANGLMILNVKGLEAENQNKITSGYINIIRQLVMKCSELPSEKLIGVLANRKAAH 657
+ +L N NGL+I+ AE N + ++ + +L+ K +++ +L +LA+ A+
Sbjct: 608 LVSLKNINGLLIVPSNTAVAEAHNALNQKFLLLSTRLMEKFADILPGQLSKILADEDASQ 667
Query: 658 GLWSCLFSSDTDLYQETTNILYEVFNVEGRLEGLHELFKSNLSTSLHCISIVLRQLTKTK 717
G WSC+FSSD LYQ TNILY F+VEGRLEG+ + SNL+ +L I+++L++L +
Sbjct: 668 GFWSCIFSSDKHLYQAATNILYNTFDVEGRLEGILAILNSNLTVNLKNINVMLQRLINCE 727
Query: 718 FFEPCPRAIRVMMDVLSLFNEPVTGIFSDFEKFKDSDSNDELFSFWRSSWTFLDMIYLET 777
F+EPCPRA+RV+MDV+S F +P++G+F++F+ K ++ E FW S W FLD IY T
Sbjct: 728 FYEPCPRAVRVLMDVVSAFVDPISGVFANFQTLKSQNTEKEFLKFWESCWLFLDTIYKFT 787
Query: 778 IQWTSRYSNVVLENFTRDVLEVSNMLMGSYREFSDVLVKGNITEDDLFKFPMSPFKNMLY 837
++W S+Y LENFT+D L++S L+ S+REFSD+L + +L + FKNMLY
Sbjct: 788 LKWASKYDYSELENFTKDTLDLSRSLVDSFREFSDIL---HDQTKNLLLNVLETFKNMLY 844
Query: 838 WLRLNDEQLLASCVMLIVSASDLAKEKQFRFDEMLVLDMARYASKARKYPNKLSAAQSQE 897
WLRL+DE LL SCV LI+S SDLA EK + D+ LV MA+YASKA+++ NKL+ Q+ E
Sbjct: 845 WLRLSDEVLLESCVRLIISTSDLAHEKHVKVDDSLVEMMAKYASKAKRFSNKLTEQQASE 904
Query: 898 LLERSRYFNKALTNEVVKESEKYHLEKALLKKGT------KPSGSLQESKATISTVQQQP 951
+L++++ FNKALT EV E+E Y EK L + G S S + ST+
Sbjct: 905 ILQKAKIFNKALTEEVATEAENYRKEKELSRLGKVIDLTDSVPASPSLSPSLSSTIA--- 961
Query: 952 NKPSMTSGQRADSMLKKANIGSSLLSRPK-GQSTLSSYGFFKPGGTPTVSAPAP-KPLSR 1009
S ++ RAD + +KA + SS+ RP+ Q ++S+G F+ + P KPLS+
Sbjct: 962 ---SSSAESRADYLQRKA-LSSSITGRPRVAQPKITSFGTFQSSANAKLHRTKPVKPLSK 1017
Query: 1010 FELERKKLIEKRVIHPAQSQVFNTRPTLQPKKXXXXXXXXXX--FENAAELXXXXXXXXX 1067
EL R +L+ RV+HP + F+T+ K E+A EL
Sbjct: 1018 MELARMQLLNNRVVHPPSAPAFHTKSRGLSNKNDDSSSEESDNDIESARELFAIAKAKGK 1077
Query: 1068 XXXPGLLDINGKEIKKSMTPTDLRRLEEENMRQRLNVDLAPFYEKVLKWDYKRTSEYPTD 1127
+DINGK +K+ T +L + E E+MR+RLNVD+ P YE +L+WDY R SEYP D
Sbjct: 1078 GIQT--VDINGKVVKRQ-TAAELAKQELEHMRKRLNVDMNPLYEIILQWDYTRNSEYPDD 1134
Query: 1128 TETXXXXXXXXXXXX-XXXQKVMEPLLLLECWQGLCSARDREEQKSFSFIVGNRTVVSDF 1186
QKVM+PLLLLE WQGLCS+RDRE+ K FS IVGNRT VSDF
Sbjct: 1135 EPIGNYSDVKDFFNSPADYQKVMKPLLLLESWQGLCSSRDREDYKPFSIIVGNRTAVSDF 1194
Query: 1187 YEVYASINKNVVRDTGINDSDLIVLGYFPDSSSSKPLTDKEFKRSNHTCLAKIKEIKNSK 1246
Y+VYAS+ K V++D GI++SDLIV+ Y PD K L+ +FK++ HTCLAK++ +KN+K
Sbjct: 1195 YDVYASVAKQVIQDCGISESDLIVMAYLPDFRPDKRLSSDDFKKAQHTCLAKVRTLKNTK 1254
Query: 1247 GENMDLTFRIHRSHKFSNLLTLRSEIHALKVMQMTTVEREYTSLKGLPYYDLLKQILKAQ 1306
G N+D+T RIHR+H FS LTLRSEI+ +KVMQMTT+EREY++L+GL YYDL+ QIL+A+
Sbjct: 1255 GGNVDVTLRIHRNHSFSKFLTLRSEIYCVKVMQMTTIEREYSTLEGLEYYDLVGQILQAK 1314
Query: 1307 PSVPENISSTEVNRIKANFHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYF 1366
PS P N+ + E+ +K ++ LNTSQA AI+++V+ +GFSLIQGPPGTGKTKTIL I+GYF
Sbjct: 1315 PSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYF 1374
Query: 1367 ISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSG 1426
+S N +S N EQLL++QK+LICAPSNAAVDE+ LRL+ GV D G
Sbjct: 1375 LSTKNASSSNVIKVPLEKNSSNT--EQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQG 1432
Query: 1427 NTFRPEIVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKML 1486
+ F+P++VR+GRSD VN ++KDLTLEE VDK++G +YE+ D L +KF +A+ KR+ L
Sbjct: 1433 HQFKPQLVRVGRSDVVNVAIKDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRREL 1492
Query: 1487 QAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRR 1546
+ KL+ E GNP S +S+ +I+ +Q++IR+L ++I+E+G+ +DE+RE NS+ YRNR+ +RR
Sbjct: 1493 RGKLDSESGNPESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRR 1552
Query: 1547 KAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCI 1606
AQA ILA SDIICSTLSGSAHDVLA++G+KFDT+IIDEACQCTELSSIIPLRYGGKRCI
Sbjct: 1553 NAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCI 1612
Query: 1607 MVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYLLDVQYRMHPAISKFPSLEFYKG 1666
MVGDPNQLPPTVLSGAAS+ KYNQSLFVRM+KN SPYLLDVQYRMHP+ISKFPS EFY+G
Sbjct: 1613 MVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSPYLLDVQYRMHPSISKFPSSEFYQG 1672
Query: 1667 KLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENL 1726
+L+DG + +N R WH+ P PYKFFDI++G+Q+QN KTMSYTN EE +VAIELV+ L
Sbjct: 1673 RLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYL 1732
Query: 1727 LATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIII 1786
+++K DFT +IGIISPYREQMQ MR +F RYFG I IDFNTIDGFQGQEK+II+
Sbjct: 1733 FRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIIL 1792
Query: 1787 ISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNC 1846
ISCVRADD +SVGFLKDFRRMNVALTRAK S+W+LGH +SL +KLW+ LI DAK+R+C
Sbjct: 1793 ISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSC 1852
Query: 1847 LELACPGFLNPSDRYAQDTIERF 1869
L AC GFL+P + AQ + +F
Sbjct: 1853 LAYACSGFLDPRNNRAQSILRKF 1875
>SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1944
Score = 512 bits (1319), Expect = e-144
Identities = 371/1244 (29%), Positives = 612/1244 (48%), Gaps = 88/1244 (7%)
Query: 649 VLANRKAAHGLWSCLFSSDTDLYQETTNILYEVFNVEGRLEGLHELFKSNLSTSLHCISI 708
+++N G++S +FS ++ + +I+ + + ++ + EL +S S +L+
Sbjct: 571 LVSNPLTFRGIFSLVFSPILEISTGSISIIKSISLSDSVVDTIGELLRSQFSNTLNSSCY 630
Query: 709 VLRQLTKTKFFEPCPRAIRVMMDVLSLFNEPVTGIFSDFEKF-KDSDSNDELFSFWRSSW 767
VL Q K + F + +++ + V G+ S F K + + L +FW S W
Sbjct: 631 VLLQWLKVRNFGGAKHIVYFNKLIINTIFDSVDGLTSKDATFAKQVEKKESLKNFWESLW 690
Query: 768 TFLDMIYLETIQWTSRYSNVVLENFTRDVLEVSNMLMGSYREFSDVL----------VKG 817
F ++ W + +++ RD L+ +ML+ + E + + V
Sbjct: 691 KFFTHFFIVLPTWPVHDKDNLVD-LMRDTLDFCDMLINIFEEVNGFIFGLSDNDIKIVSA 749
Query: 818 NITEDDLFKFPMSPFKNMLYWLRLNDEQLLASCVMLIVSASDLAKEKQFRFDEMLVLDMA 877
N L + YWL+L D LL S V +I + K+ + + V+D+
Sbjct: 750 NDKGSALAMCIADSLVTVSYWLKLTDSSLLTSVVKVICKMLKICKKLECPISQN-VIDII 808
Query: 878 RYASKARKYPNKLSAAQSQEL-LERSRYFNKALTNEVVKESEKYHLEKALLKKGTKPSGS 936
AS L+ + ++L + + Y ++ + N ++ L K
Sbjct: 809 HRASITSDEQTILTFTEREDLFISLTPYLSEDVLNH-----SPFNDTNTLETKLQSDDRG 863
Query: 937 LQESKATISTVQQQPNKPSMTSGQRADSMLKKANIGSSLLSRPKGQSTLSSYGFFKPGGT 996
L TI ++ P TS + KA S ++R +S ++ K T
Sbjct: 864 LLSKDQTIGIAKKLPESNISTSNHFL--LPPKAISASKAINRNAQKSQNLNFLKSKQETT 921
Query: 997 PTV--SAPAPKPLSRFELERK--------KLIEK----------RVIHPAQSQVF----N 1032
+ SA P+ + L K K ++K ++H ++S N
Sbjct: 922 QRIRESAKVPRTSAGNHLSEKLNSDNHIPKALQKLDSADPIRKPSLLHTSKSYSNPDDKN 981
Query: 1033 TRPTLQPKKXXXXXXXXXXFENAAELXXXXXXXXXXXXP-GLLDINGKEIKKSMTPTDLR 1091
T + + F A E LD + + K + PT LR
Sbjct: 982 TSTSDEDTSESEEESSNGLFSLAREANSHASKSLPQRRQIQFLDFDSLKTKNVVHPTQLR 1041
Query: 1092 RLEEENM---RQRLNVDLAPFYEKVLKWDYKRTSEYPTDTETXXXXXXXXXXXXXXXQKV 1148
R +++ R RLN D+ FY+ +L W+ S ++ E +KV
Sbjct: 1042 RNTQQSAQLARLRLNPDVQEFYKVILGWNPLADSFSASNVEMQCVQAKFTYNDSNAYEKV 1101
Query: 1149 MEPLLLLECWQGLCSARDREEQKSFSFIVGNRTVVSDFYEVYASINKNVVRDTGINDSDL 1208
+P+L ECW + SA + ++ I+ R+ V +F ++Y + + + + ++D+D+
Sbjct: 1102 FKPMLFHECWAQVKSAVEEKQYPPIDLILNTRSTVDNFVDIYFT-SCSPTEVSFLSDTDI 1160
Query: 1209 IVLGYFPDSSSSKPLTDKEFKRSNHTCLAKIKEIKNSKGENMDLTFRIHRSHKFSNLLTL 1268
+L SS K F+ L KI+ I K E+++L R++
Sbjct: 1161 CLLS--KSQSSGDTNNPKSFQ------LCKIQSISRKK-ESLELCLRMNIESIDLQEYAP 1211
Query: 1269 RSEIHALKVMQMTTVEREYTSLKGLPYYDLLKQILKAQPS-VPENISSTEVNRIKANFHL 1327
A K+ TT RE+ +LK L + L ++IL A + +P N + + +I ++ +
Sbjct: 1212 NIRFTAQKLFNATTSLREFAALKSLRHLPLSQRILDANVTRLPSNFTDDKKQKIMKSYGV 1271
Query: 1328 NTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXX 1387
N QA AI ++ GF+LIQGPPGTGKTKTIL ++G ++ ++ +
Sbjct: 1272 NEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQ----------FN 1321
Query: 1388 XXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNESVK 1447
+ + K+LICAPSNAA+DE++LR++ GV D+ G F P+++R+G D+++ K
Sbjct: 1322 VPGQTRKTSKNKILICAPSNAAIDEILLRIKAGVYDHEGIKFFPKVIRVGFGDSISVHAK 1381
Query: 1448 DLTLEEKVDKKLG----GSDYEMVQDSALNQKFQDALQKRKMLQAKLNK-EDGNPNSSLS 1502
+ TLEE++ K++ D E S +K+ ++KR L+ L K NSS+
Sbjct: 1382 EFTLEEQMIKQMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSI- 1440
Query: 1503 SNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICST 1562
++ ++R++ + + + + D++RE RN + +++ Q ++L E+DI+C+T
Sbjct: 1441 ------LEAQLREITKQKNMLEQSLDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCAT 1494
Query: 1563 LSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGA 1622
LS S H++L + G+ F T+IIDEA Q ELSSIIPL+YG + C+MVGDPNQLPPTVLS
Sbjct: 1495 LSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGCESCVMVGDPNQLPPTVLSKT 1554
Query: 1623 ASDMKYNQSLFVRM--QKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTR 1680
++ Y+QSL+VRM Q N S LL +QYRM+P IS+FPS FY KL DG ++ V +R
Sbjct: 1555 SAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVTSR 1614
Query: 1681 DWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRI 1740
WH+ G Y+FF++ + N+K S N EE + L E L+ Y DF +I
Sbjct: 1615 PWHEDPQLGIYRFFNVHGTEAFSNSK--SLYNVEEASFILLLYERLIQCY-LNIDFEGKI 1671
Query: 1741 GIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVG 1800
G+++PYR Q+Q +R+QF+R +G I ++D +T+DGFQGQEKDIII SCVR+ S +G
Sbjct: 1672 GVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRS-SMSGGIG 1730
Query: 1801 FLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKER 1844
FL+D RR+NVALTRAK SL+I+G+ K L+ ++ LI DAK R
Sbjct: 1731 FLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFYSLIEDAKTR 1774
>SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1687
Score = 498 bits (1283), Expect = e-140
Identities = 370/1254 (29%), Positives = 605/1254 (47%), Gaps = 152/1254 (12%)
Query: 639 SELPSEKLIGVLANRKAAHGLWSCLFSSDTDLYQETTNILYEVFN-VEGRLEGLHELFKS 697
SE S ++ +L + + S L S LY +I+ + N + R E L +L
Sbjct: 495 SEKSSTEISNMLGDSSKFDTVVSFLLSPTQPLYVSAFHIVQIITNCTKNRNEALKKLVAM 554
Query: 698 NLSTSLHCISIVLRQLTKTKFFEPCPRAIRVMMDVLSLFNEPVTGIFSDFEKFKDSDSND 757
+ +H ++ + F P R +R LS+ N+ ++ SD F ++D
Sbjct: 555 DFRGIVHGLADAVLNWQSILSFFPALRIMRF----LSITNKSLS---SDNSAFTENDI-P 606
Query: 758 ELFSFWRSSWTFLDMIYLETIQW-------TSRYSNVVLENFTRDVLEVSNMLMGSYREF 810
L ++W+ W LD+++ +W T + + F D+ + + + +F
Sbjct: 607 TLGAYWQCIWNILDLVFSNVARWSLNNPADTVKALMKLTLKFVDDLFQNDGIFIKLLAKF 666
Query: 811 SDVLVKGNITEDDLFKFPMSPFKNMLYWLRLNDEQLLASCVMLIVSASDLAKEKQFRFDE 870
+++ G T + LF F M WL++ND +L + + + F++
Sbjct: 667 DSLILLGE-TSESLFSFIM--------WLKINDLELRGIVINSLCKLFTKFSNFDYLFED 717
Query: 871 MLVLDMARYASKARKYPNKLSAAQSQELLERSRYFNKALTNEVVKESEKYHLEKALLKKG 930
V + + RK LSA Q ++L
Sbjct: 718 RTVTFLTDFI--IRKQKAHLSADQCKQL-------------------------------- 743
Query: 931 TKPSGSLQESKATISTVQQQPNKPSMTSGQRADSMLKKANIGSSLLSRPKGQSTLSSYGF 990
+ L ++ TV +Q M ++ + A++ + P Q T+
Sbjct: 744 ---ANVLTQASPEAKTVLEQHRLSEMRKTKKQTELTNSAHV---IKPSPTPQITV----- 792
Query: 991 FKPGGTPTVSAPAPKPLSRFELE--RKKLIEKRVIHPAQSQVFNTRPTLQPKKXXXXXXX 1048
K T + SAP L + + E K+ E ++ S V + +PT K
Sbjct: 793 -KQNTTKSSSAPRMGMLEQLKQEYLTKRNFESKL---KSSAVSSRKPTFNEVKPANLLAE 848
Query: 1049 XXXFENAAELXXXXXXXXXXXXPGLLDINGKEIKK---------SMTPTDLRRLEEENM- 1098
+N ++ + +I +E ++ M P+ +R + N+
Sbjct: 849 DLS-DNEDDIDRKQGLFSLAKANKIPEIRQQERRQVQLLSNSTIKMHPSQIRMMTNRNVA 907
Query: 1099 --RQRLNVDLAPFYEKVLKWDYKRTSEYPT-DTETXXXXXXXXXXXXXXXQKVMEPLLLL 1155
+ RL + FY+++L W+ S P +V++P++ +
Sbjct: 908 NVKARLFPSMTDFYKEILSWEPANQSPNPVLKFHKLDGKIIDSFKTVEHYMEVLQPMIFM 967
Query: 1156 ECWQGLCSARDREEQKSFSFIVGNRTVVSDFYEVYASINKNVVRDTGINDSDLIVLGYFP 1215
ECW + S + + I+ RT V++F ++ S+ + + D++++ L +
Sbjct: 968 ECWSQIQSTKLDLKFSPVEGIMVERTAVNNFVDIGVSVAPKDLYGYPLYDTEVVSLAFNK 1027
Query: 1216 -DSSSSKPLTDKEFKRSNHTCLAKIKEIKNSKGENMDLTFRIHRSHKFSNLLTLRSEIHA 1274
D+SS K L C AK++ I + + R S + N L +
Sbjct: 1028 EDASSMKGLC----------CFAKVERIVRQTNGVL-VVLRTLPSMEILNKLQGNCALWF 1076
Query: 1275 LKVMQMTTVEREYTSLKGLPYYDLLKQILKAQP-SVPENISSTEVNRIKANFHLNTSQAT 1333
LK+ + T R+Y ++GLPY+ L I++A+P S P SS+E+ + +N QA
Sbjct: 1077 LKLTNLATFTRQYAGIRGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRYQVNEPQAK 1136
Query: 1334 AILSTVTTQGFSLIQGPPGTGKTKTILSIVG--------YFISKANTNSKNXXXXXXXXX 1385
AI+ + GF+LIQGPPGTGKTKTI+ I+ Y I++ N SK+
Sbjct: 1137 AIMCALDNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTES------ 1190
Query: 1386 XXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNES 1445
+Q++L+CAPSNAAVDE++LRL+ G L +G + P +VRIG + +N S
Sbjct: 1191 -----------KQQILLCAPSNAAVDEVLLRLKRGFLLENGEKYIPRVVRIGNPETINVS 1239
Query: 1446 VKDLTLEEKVDKKL-----GGSDYEMVQD-SALNQKFQDALQKRKMLQAKLNKEDGNPNS 1499
V+DL+LE + +K+L G D +Q+ + F D +QK + L+ +++
Sbjct: 1240 VRDLSLEYQTEKQLLEVNQGAIDLGSLQELTRWRDTFYDCIQKIEELEKQID-------- 1291
Query: 1500 SLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKY-RNREQN--RRKAQARILAES 1556
++ + D + ++L+ I+E + ++ E S + +N+E + R+KAQ IL ++
Sbjct: 1292 -VARDVAEDTKSLGKELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQA 1350
Query: 1557 DIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPP 1616
D++C+TLSGS HD++A + F T+IIDEA Q EL +IIPLRYG K+CI+VGDPNQLPP
Sbjct: 1351 DVVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVGDPNQLPP 1410
Query: 1617 TVLSGAASDMKYNQSLFVRMQKNCSPY--LLDVQYRMHPAISKFPSLEFYKGKLQDGSSV 1674
TVLS A+ + Y+QSLFVR+QKN S LL +QYRMHP IS FPS +FY +L+DG ++
Sbjct: 1411 TVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDGDNM 1470
Query: 1675 QEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKY 1734
E + WH F Y+ FD V GK++ + TMS N EE + + +V+ LL +
Sbjct: 1471 AEKTQQVWHVNPKFTQYRLFD-VRGKER-TSNTMSTYNLEEVEYLVNMVDELLNKFPD-V 1527
Query: 1735 DFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADD 1794
+FT RIG+I+PYR Q+ +R F+ +G S ID T+DGFQGQEKDII SCV++
Sbjct: 1528 NFTGRIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKS-Y 1586
Query: 1795 NSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCLE 1848
+ +GFL+DFRR+NVALTRA+ SL I+G+ ++L + LW L+ DA R +E
Sbjct: 1587 SKHGIGFLRDFRRLNVALTRARSSLLIIGNMETLKTDDLWGSLVDDALSRKLVE 1640
>At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1939
Score = 310 bits (793), Expect = 2e-83
Identities = 231/685 (33%), Positives = 356/685 (51%), Gaps = 112/685 (16%)
Query: 1264 NLLTLRSEIHALKVMQMTTVEREYTSLKGLPYYDLLKQILKAQPSVPENISSTEVNR--- 1320
NLL RS+ HA +++ +T+ RE+ +L + +L IL P N S EV R
Sbjct: 1033 NLLE-RSQWHASRILNITSQIREFQALSCIKDIPVLPLILS--PMNDSNYDS-EVKRSDL 1088
Query: 1321 ----------IKANFHLNTSQA--TAILSTVTTQGF--SLIQGPPGTGKTKTILSIVGYF 1366
+K++F+ + QA AI S+ + F SLIQGPPGTGKT+TI++I+
Sbjct: 1089 RSLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVAIISGL 1148
Query: 1367 ISKANTNSK------------------NXXXXXXXXXXXXXXXEQLLE------------ 1396
++ A+ + N +QL +
Sbjct: 1149 LASASHKTSDRGNSEPGHSSSTSRQGMNPSVAVARAWQDAALAKQLNDNSETNRKIAEKN 1208
Query: 1397 -RQKVLICAPSNAAVDELVLRLRE-GVLDYSGNTFRPEIVRIGRSDAVNESVKDLTLEEK 1454
R +VLICA SNAAVDELV R+ G+ G F+P +VR+G + V+ + L+
Sbjct: 1209 GRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYLVRVGNAKTVHSNSMPFFLDTL 1268
Query: 1455 VDKKLGG---------------------SDYEMVQDSALNQKFQDALQKRKMLQAKLNKE 1493
VD++L S+ E V D + + + A ++ L AK E
Sbjct: 1269 VDQRLAEERMRINESKSNKGADSSALLRSNLEKVVDQITHFEAKRANINQESLDAKDKPE 1328
Query: 1494 DGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEI-RESNSLKYRNREQN------RR 1546
+ + N ++D ++ IR LRRL +QK +I ++ ++++ + R+ N ++
Sbjct: 1329 NEHHNKDDDGKLMSDAELGIR-LRRLY----EQKRKIYKDLSAVQAQERKANYEMRTLKQ 1383
Query: 1547 KAQARILAESDIICSTLSGSAHDVLA----SLGVK----------FDTIIIDEACQCTEL 1592
K + IL E+ I+ +TLSG D+ + SL FD ++IDEA Q E
Sbjct: 1384 KLRKSILKEAQIVVTTLSGCGGDLYSVCAESLAAHKFGSPSEDNLFDAVVIDEAAQALEP 1443
Query: 1593 SSIIPLRY---GGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL-LDVQ 1648
+++IPL+ G +CIMVGDP QLP TVLS AS Y S+F R+Q+ P L L Q
Sbjct: 1444 ATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLYECSMFERLQRAGYPILMLTQQ 1503
Query: 1649 YRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTM 1708
YRMHP I +FPS+ FY KL +G + + +H+ + GPY F+DIV G++ ++ +
Sbjct: 1504 YRMHPEICRFPSMHFYDNKLLNGVDMSS-KSAPFHENHHLGPYVFYDIVDGQEHRSGDSS 1562
Query: 1709 SYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSY 1768
S N +E + A++L+ Y S++ RIGII+PY+ Q+ +R++F FG Q+ +
Sbjct: 1563 SVCNEQEAEAAVQLLRFFKKRYPSEF-VAGRIGIITPYKRQLAVLRSRFTGAFGAQVTAD 1621
Query: 1769 IDFNTIDGFQGQEKDIIIISCVRADD------NSTSVGFLKDFRRMNVALTRAKCSLWIL 1822
++ NT+DGFQG+E DI+++S VRA N + +GF+ D RRMNVALTRAK SLW+L
Sbjct: 1622 MEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFVADVRRMNVALTRAKLSLWVL 1681
Query: 1823 GHHKSLVNNKLWKHLISDAKERNCL 1847
G+ ++L + W L+ DAKER +
Sbjct: 1682 GNTRTLQRDHNWGALVKDAKEREVI 1706
>At4g30100 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1311
Score = 290 bits (743), Expect = 1e-77
Identities = 219/676 (32%), Positives = 336/676 (49%), Gaps = 86/676 (12%)
Query: 1247 GENMDLTFRIHRSHKFSNLLTLRSEIHALKVM-QMTTVEREYTSLKGLPYYDLLKQ--IL 1303
G+ D +I +H L EI L V+ + T +REY +L + Q IL
Sbjct: 540 GDAYDSGSKIDDNHILRKLKP--KEIWHLTVLGSIATTQREYVALHAFSQLNPQMQNAIL 597
Query: 1304 KAQP-----------SVPENISSTEVNRIKANFHLNTSQATAI------LSTVTTQG--- 1343
K P +VP+ + + + +F N Q AI + T+ G
Sbjct: 598 KPSPEQFPNYGEQTPTVPDCFTPSFAGHLHRSF--NAPQLAAIHWAAMHTAAGTSSGVKR 655
Query: 1344 -----FSLIQGPPGTGKTKT------ILSIVGY------FISKANTNSKNXXXXXXXXXX 1386
F+L+QGPPGTGKT T ++ +V Y + K S
Sbjct: 656 QDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLAPESYKQVNESSSDNI 715
Query: 1387 XXXXXEQLLE---------------RQKVLICAPSNAAVDELVLR-LREGVLDYSGNTFR 1430
+++L+ + ++L+CAPSNAA DEL+ R L G +D +R
Sbjct: 716 VSGSIDEVLQNMDQNLFRTLPKLCAKPRMLVCAPSNAATDELLSRVLDRGFIDGEMRVYR 775
Query: 1431 PEIVRIG------RSDAVN-ESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKR 1483
P++ R+G + AV+ E DL L + ++ LG V+D+ L+Q L++
Sbjct: 776 PDVARVGVDTQTKAAQAVSVERRSDLLLAKSREEILGHIHNLRVRDAQLSQDIA-GLKRE 834
Query: 1484 KMLQAKLNKEDGNPNSSLSSNEIADIQMEIRD--LRRLISEM-GKQKDEIRESNSL---- 1536
A N+ G+ ++ ++ + RD L+RL + + + KD + S L
Sbjct: 835 LTAAAFANRSQGSVG---VDPDVLMVRDQTRDAMLQRLSAVVEARDKDLVEMSRLLIVEG 891
Query: 1537 KYR-----NREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTE 1591
K+R N E+ R +A E++I+ +T+S S + + L FD ++IDEA Q +E
Sbjct: 892 KFRAGTSFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASE 951
Query: 1592 LSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQ-KNCSPYLLDVQYR 1650
+ + PL G RC++VGDP QLP TV+S AA + Y++SLF R Q C LL VQYR
Sbjct: 952 VGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYR 1011
Query: 1651 MHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSY 1710
MHP I FPS FY+G+L D SV ++K PY FFDI G++ ++SY
Sbjct: 1012 MHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSY 1071
Query: 1711 TNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYID 1770
N +E + + + +L T +S +G+I+PY+ Q++ ++ +F I
Sbjct: 1072 ENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIY 1131
Query: 1771 FNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVN 1830
NT+D FQGQE+D+II+SCVRA ++ VGF+ D RRMNVALTRAK +LW++G+ +L+
Sbjct: 1132 INTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRAKRALWVMGNASALMK 1189
Query: 1831 NKLWKHLISDAKERNC 1846
+ W LI+DAK RNC
Sbjct: 1190 CEDWAALITDAKARNC 1205
>At2g19120 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1090
Score = 287 bits (735), Expect = 1e-76
Identities = 203/655 (30%), Positives = 328/655 (49%), Gaps = 94/655 (14%)
Query: 1273 HALKVMQMTTVEREYTSLKGL-------------PYYDLLKQILKAQPSVPENISSTEVN 1319
H + + T +REY +L P + + P+ P+ +++ V+
Sbjct: 401 HLTVLGSLATTQREYVALHAFSRLNPQMQNAILNPSPEQFPSYEEQTPATPDCFTTSFVD 460
Query: 1320 RIKANFHLNTSQATAI------LSTVTTQG--------FSLIQGPPGTGKTKTILSIVG- 1364
+ +F N Q AI + T+ G F+L+QGPPGTGKT T+ ++
Sbjct: 461 HLHRSF--NAPQLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHTVWGMLNV 518
Query: 1365 --------YFIS-----------KANTNSKNXXXXXXXXXXXXXXXE--------QLLER 1397
Y+ S +AN S + + +L +
Sbjct: 519 IHLVQYQQYYTSLLKKLAPETYNQANECSSSDNILSGSIDEVLQNMDHNLFRTLPKLCAK 578
Query: 1398 QKVLICAPSNAAVDELVLR-LREGVLDYSGNTFRPEIVRIGRSDAVNESVKDLTLEEKVD 1456
++L+CAPSNAA DEL+ R L G +D +RP++ R+G D+ + + + +++E + D
Sbjct: 579 PRMLVCAPSNAATDELLSRVLDRGFIDGEMRVYRPDVARVG-VDSQSRAAQAVSVERRSD 637
Query: 1457 KKLGGSDYEM--------VQDSALNQKFQDALQKRKMLQAKLNKEDG----NPNSSLSSN 1504
+ L S E+ +Q++ ++Q L++ A + G +P +S +
Sbjct: 638 QLLAISRDEILRHMRNLRLQETQISQNIA-GLKRELNAAAFATRSQGSVGVDPEVLISRD 696
Query: 1505 EIADIQM-------EIRD-----LRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARI 1552
+ D + E RD + RL+ GK R N+ N E+ R +A
Sbjct: 697 QKRDALLQHLAAVVEARDKVLVEISRLLIVEGK----FRAGNNF---NLEEARASLEASF 749
Query: 1553 LAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPN 1612
E++I+ +T+S S + + L FD ++IDEA Q +E+ + PL G RC++VGDP
Sbjct: 750 ANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQ 809
Query: 1613 QLPPTVLSGAASDMKYNQSLFVRMQ-KNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDG 1671
QLP TV+S AA + Y++SLF R Q C LL VQYRMHP I FPS FY+G+L+D
Sbjct: 810 QLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDS 869
Query: 1672 SSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYE 1731
S+ ++K PY FF+I G++ ++SY N +E + + + +L T +
Sbjct: 870 ESISSAPDEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLK 929
Query: 1732 SKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVR 1791
S +G+I+PY+ Q++ ++++F G I NT+D FQGQE+D+II+SCVR
Sbjct: 930 SLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCVR 989
Query: 1792 ADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNC 1846
A + VGF+ D RRMNVALTRA+ +LW++G+ +L+ ++ W LISDA+ RNC
Sbjct: 990 ASGH--GVGFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAALISDARGRNC 1042
>Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 828
Score = 246 bits (629), Expect = 2e-64
Identities = 192/621 (30%), Positives = 310/621 (49%), Gaps = 77/621 (12%)
Query: 1268 LRSEIHALKVMQMTTVEREYTSLKGLPYYD-LLKQILKAQPS--VPENISSTEVNRIKAN 1324
L ++ + + + T +R+ ++ L + L + +L P +++ +T RI A
Sbjct: 22 LNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKDLLTTTSERIIAY 81
Query: 1325 FH-LNTSQATAILSTVTTQGFS-------LIQGPPGTGKTKTILSIVGYFISKANTNSKN 1376
N Q AI + S LI GPPGTGK+KTI+ ++ +++ +
Sbjct: 82 LRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHS 141
Query: 1377 XXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDEL----VLRLREGVLDYS---GNTF 1429
+++ +VL+CAPSNAAVDEL +L +E D GN
Sbjct: 142 DENSNAK-----------IKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCG 190
Query: 1430 RPEIVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRK-MLQA 1488
+VR+G ++N V +L+ +V+ ++ VQ A+ KRK L
Sbjct: 191 DINLVRLGPEKSINSEVLKFSLDSQVNHRMKKELPSHVQ----------AMHKRKEFLDY 240
Query: 1489 KLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKA 1548
+L++ EI + ++L IS++ K++ E+ K + + +K
Sbjct: 241 QLDELSRQRALCRGGREI-----QRQELDENISKVSKERQELAS----KIKEVQGRPQKT 291
Query: 1549 QARILAESDIICSTLSGSAHDVLASL-----GVKFDTIIIDEACQCTELSSIIPLRYGGK 1603
Q+ I+ ES IIC TLS S +L S GV F +I+DEA Q E+ ++ PL +
Sbjct: 292 QSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCN 351
Query: 1604 RCIMVGDPNQLPPTVLSGAASDMKYNQSLFVR----MQKNCS-------PYL-LDVQYRM 1651
+ I+VGDP QLPPTV+S A + Y+QS+ R +++N P L L VQYRM
Sbjct: 352 KLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRM 411
Query: 1652 HPAISKFPSLEFYKGKLQDGSSVQEVN-TRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSY 1710
HP I FPS Y L+ + + + DW PF PY FD+ G ++++ SY
Sbjct: 412 HPDICLFPSNYVYNRNLKTNRQTEAIRCSSDW----PFQPYLVFDVGDGSERRDND--SY 465
Query: 1711 TNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYID 1770
N +E K+ +E+++ L+ F N IGII+ Y+ Q ++ + F + + +D
Sbjct: 466 INVQEIKLVMEIIK-LIKDKRKDVSFRN-IGIITHYKAQKTMIQKDLDKEFDRKGPAEVD 523
Query: 1771 FNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVN 1830
T+D FQG++KD +I++CVRA+ S+GFL +R+NV +TRAK SL+ILGH ++L+
Sbjct: 524 --TVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLME 581
Query: 1831 NKLWKHLISDAKERNCLELAC 1851
N+ W LI DA++R + C
Sbjct: 582 NQHWNQLIQDAQKRGAIIKTC 602
>YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 971
Score = 214 bits (546), Expect = 9e-55
Identities = 179/571 (31%), Positives = 271/571 (47%), Gaps = 122/571 (21%)
Query: 1289 SLKGLPYYDLL-KQILKAQPSVPENISSTEVNRIKANFHLNTSQATAILSTVTTQGFSLI 1347
S+ G YY +L Q++ VP + N + LN+SQ+ A+ S V + SLI
Sbjct: 374 SISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQ----LNSSQSNAV-SHVLQRPLSLI 428
Query: 1348 QGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSN 1407
QGPPGTGKT T +IV Y +SK + + ++L+CAPSN
Sbjct: 429 QGPPGTGKTVTSATIV-YHLSK-------------------------IHKDRILVCAPSN 462
Query: 1408 AAVDELVLRLREGVLDYSGNTFRPEIVRI---GRSDAVNESVKDLTLEEKVDKKLGGSDY 1464
AVD L +LR+ L ++VR+ R D V SV +L L V + G
Sbjct: 463 VAVDHLAAKLRDLGL---------KVVRLTAKSRED-VESSVSNLALHNLVGRGAKG--- 509
Query: 1465 EMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMG 1524
E+++L +L
Sbjct: 510 -----------------------------------------------ELKNLLKL----- 517
Query: 1525 KQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIID 1584
KDE+ E ++ + + RK +A IL ++D++C T G+ L KF T++ID
Sbjct: 518 --KDEVGELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGD---KRLDTKFRTVLID 572
Query: 1585 EACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRM-QKNCSPY 1643
E+ Q +E +IP+ G K+ I+VGD QL P +L A+D QSLF R+ P
Sbjct: 573 ESTQASEPECLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPI 632
Query: 1644 LLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPF---GPYKFFDIVTGK 1700
L+VQYRM+P +S+FPS FY+G LQ+G ++++ + K+P+ G F G+
Sbjct: 633 RLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVP--NSKFPWPIRGIPMMFWANYGR 690
Query: 1701 QKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQ----MQNMRNQ 1756
++ + S+ N E ++ L +IG+I+PY Q +Q M Q
Sbjct: 691 EEISANGTSFLNRIEAMNCERIITKLFRDGVK----PEQIGVITPYEGQRAYILQYM--Q 744
Query: 1757 FRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAK 1816
+ ++ ++D FQG+EKD II+SCVRA++ ++GFL+D RR+NV LTRAK
Sbjct: 745 MNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQ-AIGFLRDPRRLNVGLTRAK 803
Query: 1817 CSLWILGHHKSLVNNKLWKHLISDAKERNCL 1847
L ILG+ +SL N LW HL+ +E+ CL
Sbjct: 804 YGLVILGNPRSLARNTLWNHLLIHFREKGCL 834
>At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1235
Score = 214 bits (544), Expect = 1e-54
Identities = 183/569 (32%), Positives = 271/569 (47%), Gaps = 112/569 (19%)
Query: 1288 TSLKGLPYYDLLKQILKAQPSVPENISSTEVNR--IKANFHLNTSQATAILSTVTTQGFS 1345
TS+ G Y+ LL ++AQ + +T R + LN SQ A+ S V + S
Sbjct: 450 TSVSGYIYHQLLGHEVEAQM-----VRNTLPRRFGVPGLPELNASQVNAVKS-VLQKPIS 503
Query: 1346 LIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAP 1405
LIQGPPGTGKT T +IV Y ++K +VL+CAP
Sbjct: 504 LIQGPPGTGKTVTSAAIV-YHMAKQGQG-------------------------QVLVCAP 537
Query: 1406 SNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRS--DAVNESVKDLTLEEKVDKKLGGSD 1463
SN AVD+L ++ L ++VR+ +AV+ V+ LTL +V
Sbjct: 538 SNVAVDQLAEKISATGL---------KVVRLCAKSREAVSSPVEYLTLHYQV-------- 580
Query: 1464 YEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEM 1523
L ++E + E+ L++L E
Sbjct: 581 -----------------------------------RHLDTSE----KSELHKLQQLKDEQ 601
Query: 1524 GKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIII 1583
G E+ S+ KY+N +R + I +D+IC T G+A L++ +F ++I
Sbjct: 602 G----ELSSSDEKKYKNL---KRATEREITQSADVICCTCVGAADLRLSNF--RFRQVLI 652
Query: 1584 DEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQK-NCSP 1642
DE+ Q TE +IPL G K+ ++VGD QL P ++ A+ QSLF R+ P
Sbjct: 653 DESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKP 712
Query: 1643 YLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTR--DWHKKYPFGPYKFFDIVTGK 1700
L VQYRMHPA+S+FPS FY+G LQ+G ++ E T D+ P P FF + G+
Sbjct: 713 IRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPM-FFYVQLGQ 771
Query: 1701 QKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRY 1760
++ + SY N E VE L+ + ++IG+I+PY Q + N R
Sbjct: 772 EEISASGTSYLNRTEAAN----VEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARN 827
Query: 1761 --FGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCS 1818
Q+ I+ ++D FQG+EKD II+SCVR++++ +GFL D RR+NVALTRA+
Sbjct: 828 GSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ-GIGFLNDPRRLNVALTRARYG 886
Query: 1819 LWILGHHKSLVNNKLWKHLISDAKERNCL 1847
+ ILG+ K L LW L++ KE CL
Sbjct: 887 IVILGNPKVLSKQPLWNGLLTHYKEHECL 915
>SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 925
Score = 202 bits (514), Expect = 4e-51
Identities = 172/576 (29%), Positives = 273/576 (46%), Gaps = 116/576 (20%)
Query: 1296 YDLLKQILKAQPSVPENISSTEVNRIKANFHLNTSQATAILSTVTTQGFSLIQGPPGTGK 1355
+D+ LK P +P ++S + + LN SQ+ A+ + V ++ SLIQGPPGTGK
Sbjct: 370 HDIPPSFLK--PKLPSDLSVPNLPK------LNASQSEAVRA-VLSKPLSLIQGPPGTGK 420
Query: 1356 TKTILSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVL 1415
T T S+V + + + K+ VL+CAPSN AVD+L
Sbjct: 421 TVTSASVVYHLATMQSRKRKS--------------------HSPVLVCAPSNVAVDQLAE 460
Query: 1416 RLREGVLDYSGNTFRPEIVRIGRS--DAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALN 1473
++ L +VR+ + + SV L+L E++ N
Sbjct: 461 KIHRTGL---------RVVRVAAKSREDIESSVSFLSLHEQIK----------------N 495
Query: 1474 QKFQDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRES 1533
KF LQ+ L+++ +NE++ IQ E + LR L++
Sbjct: 496 YKFNPELQRLLKLRSE-------------NNELS-IQDE-KKLRILVAA----------- 529
Query: 1534 NSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELS 1593
A+ +L + +IC T G+ ++ KF +++IDEA Q +E
Sbjct: 530 --------------AEKELLRAAHVICCTCVGAGDRRISKY--KFRSVLIDEATQASEPE 573
Query: 1594 SIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRM-QKNCSPYLLDVQYRMH 1652
+IPL G K+ ++VGD QL P V++ + +QSLF R+ SP+ L VQYRMH
Sbjct: 574 CMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMH 633
Query: 1653 PAISKFPSLEFYKGKLQDGSSVQEVNTR--DWHKKYPFGPYKFFDIVTGKQKQNTKTMSY 1710
P +S+FPS FY+G LQ+G + E R D+ P P F+ G+++ + S+
Sbjct: 634 PCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFY-ANFGQEELSASGTSF 692
Query: 1711 TNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQ----MQNMRNQFRRYFGDQIR 1766
N E E ++ T+ +IGI++PY Q +Q M+N +
Sbjct: 693 LNRTEASTC----EKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQN--NGSMQKDLY 746
Query: 1767 SYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHK 1826
++ ++D FQG+EKD II+SCVR+ ++ +GF+ D RR+NVALTRAK + +LG+ K
Sbjct: 747 KAVEVASVDAFQGREKDFIILSCVRSSEHQ-GIGFVNDPRRLNVALTRAKYGVIVLGNPK 805
Query: 1827 SLVNNKLWKHLISDAKERNCLELACPGFLNPSDRYA 1862
L + LW H + KE+ L G LN +++
Sbjct: 806 VLAKHALWYHFVLHCKEKGYL---VEGTLNSLQKFS 838
>CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1069
Score = 201 bits (511), Expect = 1e-50
Identities = 176/588 (29%), Positives = 274/588 (45%), Gaps = 121/588 (20%)
Query: 1277 VMQMTTVEREYTSLKGL--------PYYDLLKQILKAQPSVPENISSTEVNRIKANF--H 1326
V TT ER+Y +L L PY L Q L P+ + R+
Sbjct: 389 VWNATTFERQYKALAALLNDSKAISPY---LYQKLLGHPAEEMMLKFDLPRRLSVAGLPE 445
Query: 1327 LNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXX 1386
LN+SQ A+ V T+ SLIQGPPGTGKT +IV + + K N
Sbjct: 446 LNSSQMQAV-KQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGN------------- 491
Query: 1387 XXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRI-GRSDAVNES 1445
VL+C+PSN AVD L ++ + L ++VR+ RS +E+
Sbjct: 492 -------------VLVCSPSNIAVDHLAEKIHKTGL---------KVVRLCARSREHSET 529
Query: 1446 -VKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSN 1504
V LTL+ ++ K +GG++ + K++Q K +
Sbjct: 530 TVPYLTLQHQL-KVMGGAELQ------------------KLIQLK--------------D 556
Query: 1505 EIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLS 1564
E +++ KD++R Q +R + +LA +D+IC T S
Sbjct: 557 EAGELEF---------------KDDLRYM---------QLKRVKEHELLAAADVICCTCS 592
Query: 1565 GSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAAS 1624
+A L+ + + T++IDE+ Q TE ++ + G ++ ++VGD QL P V+ A+
Sbjct: 593 SAADARLSKIRTR--TVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAA 650
Query: 1625 DMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTR--D 1681
+QSLF R+ P+ L VQYRMHP +S+FPS FY G LQ+G + + + D
Sbjct: 651 IAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVD 710
Query: 1682 WHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIG 1741
WH P P FF +G ++ + S+ N E +LV L+ + +IG
Sbjct: 711 WHWPKPNKP-AFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPH----QIG 765
Query: 1742 IISPYREQMQNMRNQFRRY--FGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSV 1799
+I+PY Q + N ++ ++ ++D FQG+EKD II++CVR++D +
Sbjct: 766 VITPYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSND-ILGI 824
Query: 1800 GFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCL 1847
GFL D RR+NVA+TRAK L ++G+ K L + LW LI+ K + L
Sbjct: 825 GFLSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEML 872
>At1g65810 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1050
Score = 201 bits (511), Expect = 1e-50
Identities = 187/613 (30%), Positives = 286/613 (46%), Gaps = 110/613 (17%)
Query: 1311 ENISSTEVNRIKANFHLNTSQATAILSTVTTQG------FSLIQGPPGTGKTKTILSIVG 1364
E++ S R+ +F LN+SQ AIL + + LI GPPGTGKTKT ++
Sbjct: 251 ESVVSDYSARMLRSFKLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLL 310
Query: 1365 YFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGV--- 1421
F+ R + L CAP+N AV E+ RL + V
Sbjct: 311 NFLKM---------------------------RCRTLTCAPTNIAVLEVCSRLVKLVSES 343
Query: 1422 LDYSGNTFRPEIVRIGRSDAVN----ESVKDLTLEEKVDKK------------------- 1458
L + G +IV G + + E + D+ LE +VD+
Sbjct: 344 LRFDGYGLG-DIVLFGNKERMKIDDREDLFDVFLEYRVDELYRCFMALTGWRANVNRMIC 402
Query: 1459 -LGGSDYEMVQDSALNQ---KFQDALQKR-KMLQAKLNKEDG----NPNSSLSSNEIADI 1509
L +E Q ++N F+D +++R L+ L+ + + +SL S +A+
Sbjct: 403 LLSDPKHEFRQFKSVNTTLLSFKDFVEERLSRLRYDLHHQFTTLCLHLPTSLLSFRVAEK 462
Query: 1510 QMEIRDLRRLISEMGKQKDEI-RESNSLKYRNREQNRR---------------------- 1546
+ +L R I+ +D R LK E + R
Sbjct: 463 MNQTNNLLRNIAASDVMRDGYGRMKYKLKDTGDENDSRTQDCLEMLTSISMSIKLPDFIS 522
Query: 1547 --KAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGG-K 1603
+ Q L + ++ T S SA ++S ++IDEA Q E S IPL+ G +
Sbjct: 523 KFELQKLCLDNAYLLFCTASSSARLHMSS---PIQLLVIDEAAQLKECESAIPLQLRGLQ 579
Query: 1604 RCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLE 1662
I++GD QLP + S AS+ +SLF R+ + LL++QYRMHP+IS FP+ E
Sbjct: 580 HAILIGDEKQLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNRE 639
Query: 1663 FYKGKLQDGSSVQEVNTRDWHKKY----PFGPYKFFDIVTGKQKQNTKTMSYTNPEETKV 1718
FY K+ D SV+ R + KK+ +GPY F +I G++ Q + S N E V
Sbjct: 640 FYDMKILDAPSVR---LRSYEKKFLPEKMYGPYSFINIAYGRE-QFGEGYSSKNLVEVSV 695
Query: 1719 AIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQ 1778
E+V L + K T +G+ISPY+ Q+ ++ + + + + ++DGFQ
Sbjct: 696 VAEIVSKLYSV-SRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFTVSVRSVDGFQ 754
Query: 1779 GQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNK-LWKHL 1837
G E+DIIIIS VR++ N ++GFL + +R NVALTRA+ LWILG+ +L NN+ +W+ L
Sbjct: 755 GGEEDIIIISTVRSNGNG-AIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQL 813
Query: 1838 ISDAKERNCLELA 1850
+ DAK RNC A
Sbjct: 814 VDDAKARNCFHNA 826
>Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1118
Score = 187 bits (476), Expect = 1e-46
Identities = 132/381 (34%), Positives = 205/381 (53%), Gaps = 17/381 (4%)
Query: 1472 LNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIR 1531
L +K K L AK + +P S L+ + Q+ D + ++ + KDE
Sbjct: 530 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHN----QIRNMDSMPELQKLQQLKDETG 585
Query: 1532 ESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTE 1591
E +S + +R A+ +L +D+IC T G+ LA + +F +I+IDE+ Q TE
Sbjct: 586 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM--QFRSILIDESTQATE 643
Query: 1592 LSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYR 1650
++P+ G K+ I+VGD QL P V+ A+ +QSLF R+ P L VQYR
Sbjct: 644 PECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYR 703
Query: 1651 MHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYK--FFDIVTGKQKQNTKTM 1708
MHPA+S FPS FY+G LQ+G + + + + ++P P K FF + G+++ +
Sbjct: 704 MHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWP-QPDKPMFFYVTQGQEEIASSGT 762
Query: 1709 SYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRN--QFRRYFGDQIR 1766
SY N E +E + L +K D +IGII+PY Q + QF ++
Sbjct: 763 SYLNRTEA-ANVEKITTKLLKAGAKPD---QIGIITPYEGQRSYLVQYMQFSGSLHTKLY 818
Query: 1767 SYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHK 1826
++ ++D FQG+EKD II+SCVRA+++ +GFL D RR+NVALTRA+ + I+G+ K
Sbjct: 819 QEVEIASVDAFQGREKDFIILSCVRANEHQ-GIGFLNDPRRLNVALTRARYGVIIVGNPK 877
Query: 1827 SLVNNKLWKHLISDAKERNCL 1847
+L LW HL++ KE+ L
Sbjct: 878 ALSKQPLWNHLLNYYKEQKVL 898
>At5g37160 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 871
Score = 187 bits (474), Expect = 2e-46
Identities = 177/661 (26%), Positives = 305/661 (45%), Gaps = 102/661 (15%)
Query: 1277 VMQMTTVEREYTSL-KGLPYYDLLKQILKAQPSVPENISSTE----------VNRIKANF 1325
++ +TT R + +L K L++ +L+ S E S E V I +
Sbjct: 183 LINITTNTRIWNALHKDAADSTLIQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSA 242
Query: 1326 HLNTSQATAILSTVTT------QGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXX 1379
LN+SQ AIL + T + LI GPPGTGKTKT+ +++ + K
Sbjct: 243 KLNSSQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQ---LKCKTVVC 299
Query: 1380 XXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDY--------------- 1424
L ++ ++CAP+N+A+ E+V R L Y
Sbjct: 300 APTNTTIVAVASRLLSLSKETIVCAPTNSAIAEVVSRFEFSTLFYGTSILERTTYGMGNI 359
Query: 1425 --SGNT---------------FRPEIVRIGRSDAVN-------ESVKDL--TLEEKVDKK 1458
SGN F + ++GR ES+ D E K ++
Sbjct: 360 VLSGNRERMGITSNKVLLNVFFNDRVSKLGRLFLSTCGWKKRLESIIDFLENTETKYEQH 419
Query: 1459 LGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGN-PNSSLSSNEIADIQMEIRDLR 1517
+ + E + + ++K ++ +++R M + + + P S +SS ++ ++ + L
Sbjct: 420 VNELELERMTE---DEKKKEEVEERTMQEVDMADLSTHLPKSFISSKDVKNLIAACQALH 476
Query: 1518 RL--ISEMGKQKDEIRES-------NSLKYRNREQ---------------NRRKAQARIL 1553
R+ + +D+ ++ N L + Q N + L
Sbjct: 477 RVRYFLQENSSRDDFKKGGFRFNCFNKLISVDALQALCLLPKCFGIFGLANNEDIRKFCL 536
Query: 1554 AESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGK-RCIMVGDPN 1612
+DII T S A+ A +G D +++DE Q E S+ L+ G +++GD
Sbjct: 537 QNADIIFCTASSVANINPARIG-SVDLLVVDETAQLKECESVAALQLPGLCHALLIGDEY 595
Query: 1613 QLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDG 1671
QLP V + K+ +SLF R+ S +LL+VQYRMHP+IS+FP+ EFY G++ D
Sbjct: 596 QLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGGRITDA 655
Query: 1672 SSVQE-VNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATY 1730
++VQE + + + + FG + F ++ GK++ S N E V +++ NL
Sbjct: 656 ANVQESIYEKRFLQGNMFGTFSFINVGRGKEEFG-DGHSPKNMVEVAVISKIISNLFKV- 713
Query: 1731 ESKYDFTNRIGIISPYREQM----QNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIII 1786
S+ +G+ISPY+ Q+ + + +++ DQ+ + ++ ++DGFQG E D+II
Sbjct: 714 SSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFT-LNVQSVDGFQGGEVDVII 772
Query: 1787 ISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL-VNNKLWKHLISDAKERN 1845
IS VR + N +VGFL + +R NVALTRA+ LW++G+ +L ++ +W LIS+++ R
Sbjct: 773 ISTVRCNVNG-NVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTRG 831
Query: 1846 C 1846
C
Sbjct: 832 C 832
>7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1417
Score = 178 bits (452), Expect = 7e-44
Identities = 173/641 (26%), Positives = 285/641 (43%), Gaps = 108/641 (16%)
Query: 1237 AKIKEIKNSKGENMDLTFRIHRSHKFSNLLTLRSEIHALKVMQMTTVER-EYTSLKGLPY 1295
A + E+K G DLTF I + L ++ A V+ VE +++ L
Sbjct: 822 ANLLELKFVSGNVFDLTFEILKQDISEEKLKNIKQLTARPVVDSLRVELGALSAVHQLRS 881
Query: 1296 YDLLKQILKAQPSVPENISSTEVNRIKANFHLNTSQATAILSTVTT------QGFSLIQG 1349
L ++ILK +V E + K LN Q +L T +LIQG
Sbjct: 882 SPLCRRILKPTQTVNEVSLPKQPFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQG 941
Query: 1350 PPGTGKTKTI--LSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSN 1407
PPGTGK++ I L + + + A T L+R K+LICA SN
Sbjct: 942 PPGTGKSRVISELCLQTLYGNAAKT----------------------LDR-KILICAHSN 978
Query: 1408 AAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMV 1467
AVD +V L + + + F ++R G + ++ + +LE +K
Sbjct: 979 TAVDHIVGLLGSVLRVMNRDQFH--LLRFGMHEKMSHYSRPFSLEAHFNK---------- 1026
Query: 1468 QDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRR--------L 1519
A QK Q +++KE N+ + + D++ EI+ L+ L
Sbjct: 1027 ---AKEQKLQ-----------RVSKE----NAEILKKQHNDLKDEIQQLKEKTNLTSTYL 1068
Query: 1520 ISEMGKQKDEIRE-SNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKF 1578
+ ++ +++ +++ SN L ++ + + ++IIC+TLS LA+ F
Sbjct: 1069 LQQLQQKEKKLQLISNQLSPPLTQREEFEISHMCVTRANIICTTLSSCVK--LANYVDFF 1126
Query: 1579 DTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQK 1638
D I+DEA QCTE +++P+R+G ++VGD QLP VLS A D + S+F R+Q+
Sbjct: 1127 DICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQR 1186
Query: 1639 NCSPYL---------------LDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWH 1683
+ L L QYRMHP I ++P+ FY+ +L + +
Sbjct: 1187 SLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQLINAECTARFAS---- 1242
Query: 1684 KKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGII 1743
P PY ++ + S +N EE + +L+ + SK G+I
Sbjct: 1243 ---PLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMPSK---RFSYGLI 1296
Query: 1744 SPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLK 1803
SPY+ Q + + I T+D +QG EKD+IIIS R + GFL
Sbjct: 1297 SPYQNQCYALSQVIPSHMN------ITPQTVDSYQGLEKDVIIISNAR----TRGCGFLT 1346
Query: 1804 DFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKER 1844
+++R+NVALTR + L I G+ + L + ++W++L+ DA++R
Sbjct: 1347 NYQRLNVALTRPRRCLVICGNFEDLKSVEMWRNLLDDARKR 1387
>At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1065
Score = 172 bits (436), Expect = 5e-42
Identities = 117/305 (38%), Positives = 172/305 (56%), Gaps = 12/305 (3%)
Query: 1553 LAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKR-CIMVGDP 1611
L + ++ ST S SA G ++IDEA Q E S IP++ G R I+VGD
Sbjct: 542 LGHACLLFSTASCSAR---LYTGTPIQLLVIDEAAQLKECESSIPMQLPGLRHLILVGDE 598
Query: 1612 NQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQD 1670
QLP V S A + + +SLF R+ Y+L++QYRMH +IS FP+ E Y K+ D
Sbjct: 599 RQLPAMVESQIALEAGFGRSLFERLALLGHKKYMLNIQYRMHCSISSFPNKELYGKKILD 658
Query: 1671 GSSVQEVN-TRDWHKKYPFGPYKFFDIVTGKQKQNT-KTMSYTNPEETKVAIELVENLLA 1728
+V++ N T+ + +GPY F +I G+++ + S N E V ++ NLL
Sbjct: 659 APTVRQRNYTKQYLPGEMYGPYSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIANLLQ 718
Query: 1729 TYESKYDFTNRIGIISPYREQMQNMRNQFRRY-FGDQIRSY-IDFNTIDGFQGQEKDIII 1786
E N +G+ISPY+ Q+ ++ + + GD + + T+DGFQG E+DIII
Sbjct: 719 VSEKTKTRIN-VGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIII 777
Query: 1787 ISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNK-LWKHLISDAKERN 1845
+S VR++ VGFL + RR NV LTRA+ LWILG+ +L+N+K +W++LI DAKER
Sbjct: 778 VSTVRSNGVGR-VGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWRNLIQDAKERG 836
Query: 1846 CLELA 1850
C A
Sbjct: 837 CFHSA 841
>At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 839
Score = 169 bits (427), Expect = 5e-41
Identities = 109/304 (35%), Positives = 175/304 (56%), Gaps = 18/304 (5%)
Query: 1553 LAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKR-CIMVGDP 1611
L +DII T SG+A + G + +++DEA Q E S+ L+ G R I++GD
Sbjct: 503 LQNADIILCTASGAAEMNVERTG-NVELLVVDEAAQLKECESVAALQLPGLRHAILIGDE 561
Query: 1612 NQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQD 1670
QLP V + K+ +SLF R+ + +LLDVQYRMHP+IS+FP+ EFY G+++D
Sbjct: 562 FQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKD 621
Query: 1671 GSSVQE-VNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLAT 1729
+V+E + + + + FG + F ++ GK++ S N E V E++ NL
Sbjct: 622 AENVKESIYQKRFLQGNMFGSFSFINVGRGKEEFG-DGHSPKNMVEVAVVSEIISNLFKV 680
Query: 1730 YESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSY------IDFNTIDGFQGQEKD 1783
+ +G++SPY+ QM+ ++ + GD+ S ++ ++DGFQG E+D
Sbjct: 681 -SCERRMKVSVGVVSPYKGQMRAIQEK----IGDKYSSLSGQQFTLNVRSVDGFQGGEED 735
Query: 1784 IIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL-VNNKLWKHLISDAK 1842
IIIIS VR++ N VGFL + +R NVALTRA+ LW++G+ +L ++ +W LIS+++
Sbjct: 736 IIIISTVRSNSNG-KVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESR 794
Query: 1843 ERNC 1846
R C
Sbjct: 795 TRGC 798
>At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 638
Score = 167 bits (424), Expect = 1e-40
Identities = 101/274 (36%), Positives = 159/274 (57%), Gaps = 9/274 (3%)
Query: 1579 DTIIIDEACQCTELSSIIPLRYGGKR-CIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQ 1637
+ +++DEA Q E S+ L+ G R I++GD QLP V + K+ +SLF R+
Sbjct: 349 EVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLV 408
Query: 1638 K-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQE-VNTRDWHKKYPFGPYKFFD 1695
+LLDVQYRMHP+IS+FP EFY G+++D ++VQE + + + + FG + F +
Sbjct: 409 LLGHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFIN 468
Query: 1696 IVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRN 1755
+ GK++ S N E V E++ NL + +G+I+PY+ Q++ ++
Sbjct: 469 VGRGKEEFGDGD-SPKNMVEVAVVSEIISNLFKVSRER-KMKMSVGVITPYKGQVRAIQE 526
Query: 1756 QFRRYFGDQIRSYIDFN--TIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALT 1813
+ R + N ++DGFQG E+DIIIIS VR++ N VGFL + +R NVALT
Sbjct: 527 RIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNG-KVGFLSNRQRANVALT 585
Query: 1814 RAKCSLWILGHHKSLV-NNKLWKHLISDAKERNC 1846
RA+ LW++G+ +L + +W +LISD+K R C
Sbjct: 586 RARHCLWVIGNESTLARSGSIWANLISDSKRRKC 619
>At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 676
Score = 166 bits (421), Expect = 3e-40
Identities = 109/304 (35%), Positives = 174/304 (56%), Gaps = 18/304 (5%)
Query: 1553 LAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKR-CIMVGDP 1611
L +DII T SG+A + G + +++DEA Q E S+ L+ G R I++GD
Sbjct: 340 LQNADIILCTASGAAEMNVERTG-NVELLVVDEAAQLKECESVAALQLPGLRHAILIGDE 398
Query: 1612 NQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQD 1670
QLP V + K+ +SLF R+ + +LLDVQYRMHP+IS+FP+ EFY G+++D
Sbjct: 399 FQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKD 458
Query: 1671 GSSVQE-VNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLAT 1729
+V+E + + + K F + F ++ GK++ S N E V E++ NL
Sbjct: 459 AENVKESIYQKRFLKGNMFDSFSFINVGRGKEEFG-DGHSPKNMVEVAVISEIISNLYKV 517
Query: 1730 YESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSY------IDFNTIDGFQGQEKD 1783
+ +G++SPY+ QM+ ++ + GD+ S ++ ++DGFQG E+D
Sbjct: 518 -SCERRMKVSVGVVSPYKGQMRAIQEK----IGDKYSSLSGQQFTLNVRSVDGFQGGEED 572
Query: 1784 IIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL-VNNKLWKHLISDAK 1842
IIIIS VR++ N VGFL + +R NVALTRA+ LW++G+ +L ++ +W LIS+++
Sbjct: 573 IIIISTVRSNGNG-KVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESR 631
Query: 1843 ERNC 1846
R C
Sbjct: 632 TRGC 635
>At2g03270 [L] KOG1803 DNA helicase
Length = 635
Score = 162 bits (410), Expect = 5e-39
Identities = 182/648 (28%), Positives = 291/648 (44%), Gaps = 116/648 (17%)
Query: 1207 DLIVLGYFPDSSSSKPLTDKEFKRSNHTCLAKIKEIKNSKGENMDLTFRIHRSHKFSNLL 1266
D++VL S PL R + + + + +G N L R K +N +
Sbjct: 81 DVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDEVPEEGLNTSL-----RLEKLANEV 135
Query: 1267 TLRSEIHALKVMQMTTVEREYTSLKGLPYYDLLKQIL-KAQPSVPENISSTEVNRIKA-N 1324
T R M+ T ++ L+G P DL+ + + QPSV S +V N
Sbjct: 136 TYRR-------MKDTLIQLSKGVLRG-PASDLVPVLFGERQPSV----SKKDVKSFTPFN 183
Query: 1325 FHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXX 1384
+L+ SQ AI ++++ L+ GPPGTGKT T++ IV
Sbjct: 184 KNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIV--------------------- 222
Query: 1385 XXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNE 1444
+++ K+L CA SN AVD +V RL + ++VR+G +
Sbjct: 223 ------LQEVKRGSKILACAASNIAVDNIVERL---------VPHKVKLVRVGHPARLLP 267
Query: 1445 SVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSN 1504
V D L+ +V L G + + D K + K+L+AK N
Sbjct: 268 QVLDSALDAQV---LKGDNSGLANDIRKEMKALNG----KLLKAK------------DKN 308
Query: 1505 EIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLS 1564
IQ E+R L GK++ R R+Q A + ++ +D+I +TL+
Sbjct: 309 TRRLIQKELRTL-------GKEE-----------RKRQQ---LAVSDVIKNADVILTTLT 347
Query: 1565 GSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAAS 1624
G+ L + FD +IIDE Q E++ I L G RCI+ GD QLPPT+ S A
Sbjct: 348 GALTRKLDNR--TFDLVIIDEGAQALEVACWIAL-LKGSRCILAGDHLQLPPTIQSAEAE 404
Query: 1625 DMKYNQSLFVRMQK---NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRD 1681
++LF R+ + +L VQYRMH I + S E Y K+ SSV D
Sbjct: 405 RKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFD 464
Query: 1682 WHKKYPFGPYKFFDIVTG------KQKQNTKTMSYTNPEETKVAIELVENLLATYESKYD 1735
+ ++ ++K++ + +Y N E +VA+ + L+ + D
Sbjct: 465 LENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTY-NEGEAEVAMAHAKRLMESGVQPSD 523
Query: 1736 FTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDN 1795
IGII+PY Q+ +R R ++++ ++ +T+DGFQG+EK+ IIIS VR+ ++
Sbjct: 524 ----IGIITPYAAQVMLLR--ILRGKEEKLKD-MEISTVDGFQGREKEAIIISMVRS-NS 575
Query: 1796 STSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKE 1843
VGFLKD RRMNVA+TR++ I+ +++ ++ K +I +E
Sbjct: 576 KKEVGFLKDQRRMNVAVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEE 623
>At4g15570 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 525
Score = 161 bits (407), Expect = 1e-38
Identities = 106/327 (32%), Positives = 154/327 (46%), Gaps = 81/327 (24%)
Query: 1559 ICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTV 1618
+ +TLS S +LA FD +IIDEA Q E +++IPL K+ +VGDP QLP TV
Sbjct: 177 VFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATV 236
Query: 1619 LSGAASDMKYNQSLFVRMQKNCSPY-LLDVQYRMHPA----------------------- 1654
+S A D Y S+F R+QK P +L QYRMHP
Sbjct: 237 ISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPELIPISQTKPKIVVSLILTPMIAS 296
Query: 1655 -------------ISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQ 1701
I FPS +FY+G L+DGS ++ TRDWHK FGP+ FFDI GK+
Sbjct: 297 YFTLQTIFLTENQIRSFPSKQFYEGALEDGSDIEAQTTRDWHKYRCFGPFCFFDIHEGKE 356
Query: 1702 KQNT-KTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRY 1760
Q+ T S N +E + + L+ + L T + ++++ IISPY Q++ +++F+
Sbjct: 357 SQHPGATGSRVNLDEVEFVL-LIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEM 415
Query: 1761 FGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLW 1820
FG + +D NT+DGFQ
Sbjct: 416 FGTEAEKVVDINTVDGFQ------------------------------------------ 433
Query: 1821 ILGHHKSLVNNKLWKHLISDAKERNCL 1847
++G +L ++ LWK+LI A++RN L
Sbjct: 434 VVGSAATLKSDPLWKNLIESAEQRNRL 460
Score = 54.3 bits (129), Expect = 2e-06
Identities = 30/67 (44%), Positives = 45/67 (66%), Gaps = 3/67 (4%)
Query: 1397 RQKVLICAPSNAAVDELVLR-LREGVLDYSGNTFRPEIVRIGRSDAVNESVKDLTLEEKV 1455
R +VL+CAPSN+A+DE+VLR L G+ D + T+ P+IVRIG + SV ++L+ V
Sbjct: 77 RLRVLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVRIGLK--AHHSVASVSLDHLV 134
Query: 1456 DKKLGGS 1462
+K G +
Sbjct: 135 AQKRGSA 141
>At5g37140 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 692
Score = 160 bits (404), Expect = 3e-38
Identities = 105/299 (35%), Positives = 174/299 (58%), Gaps = 13/299 (4%)
Query: 1553 LAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKR-CIMVGDP 1611
L +DII T SG+A D+ D +++DEA Q E S+ L+ G R +++GD
Sbjct: 361 LQNADIIFCTASGAA-DMNPIRTGSVDLLVVDEAAQLKECESVAALQLSGLRHAVLIGDE 419
Query: 1612 NQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQD 1670
QLP V + A K+ +SLF R+ + +LL+VQYRMHP+IS+FP+ EFY G+++D
Sbjct: 420 LQLPAMVHNEA----KFGRSLFERLVLLGHNKHLLNVQYRMHPSISRFPNKEFYGGRIKD 475
Query: 1671 GSSVQE-VNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLAT 1729
++VQE + + + + FG + F ++ G+++ S N E V E++ NL
Sbjct: 476 AANVQESIYQKRFLQGNMFGSFSFINVGRGEEEFG-DGHSPKNMVEVAVISEIISNLFKV 534
Query: 1730 YESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSY-IDFNTIDGFQGQEKDIIIIS 1788
S+ +G++SPY+ Q++ ++ + + + ++ ++DGFQG E+DIIIIS
Sbjct: 535 -SSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGFQGGEEDIIIIS 593
Query: 1789 CVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL-VNNKLWKHLISDAKERNC 1846
VR++ N VGFL + +R NVALTRA+ LW++G+ +L ++ W LIS+++ C
Sbjct: 594 TVRSNGNG-KVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSSWAKLISESRTLGC 651
>ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 782
Score = 158 bits (399), Expect = 1e-37
Identities = 109/331 (32%), Positives = 173/331 (51%), Gaps = 23/331 (6%)
Query: 1511 MEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDV 1570
+ + + R + E K+KDE Y + K Q +L ++++I T S +
Sbjct: 433 LSLHENLRELQEGRKRKDEDHSRYDSIYNDEVNESLKKQ--LLNQAEVITCTCVTSGQKM 490
Query: 1571 LASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQ 1630
KF ++IDEA Q TE S+IPL YG K+ ++VGD QL PT+L + + Q
Sbjct: 491 FNRF--KFHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQ 548
Query: 1631 SLFVRM-QKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFG 1689
SLF R+ PY+L VQYRM + ++PS FY G+L G ++ G
Sbjct: 549 SLFERLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGGKN--------FCRFDLG 600
Query: 1690 -PYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYRE 1748
P FF + G+++ + S+ N E ++ +L ++ ++IG+I+PY
Sbjct: 601 IPVNFFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKCGVTE----SQIGVITPYEG 656
Query: 1749 QMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRM 1808
Q + N R FG + ++ + +DGFQG+EKD II+S VR+ + +GF+ D RRM
Sbjct: 657 QRSYILN---RIFGAE-PGNLEISNVDGFQGREKDFIIVSLVRS-NLYQGIGFVGDKRRM 711
Query: 1809 NVALTRAKCSLWILGHHKSLVNNKLWKHLIS 1839
NV LTRAK L I+G+ +L+ + +W +L+S
Sbjct: 712 NVTLTRAKHGLVIIGNPMTLMKHDMWGNLLS 742
>At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 660
Score = 155 bits (392), Expect = 6e-37
Identities = 105/288 (36%), Positives = 161/288 (55%), Gaps = 23/288 (7%)
Query: 1553 LAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGG-KRCIMVGDP 1611
L + II T SG+A ++ A D +++DEA Q E S+ L+ G +++GD
Sbjct: 378 LQNAHIIFCTASGAA-EMTAERAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLIGDE 436
Query: 1612 NQLPPTVLSGAASDMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQD 1670
QLP V S K+ +SLF R+ +LL+VQYRMHP+IS FP++EFY GK+ D
Sbjct: 437 LQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPNMEFYGGKISD 496
Query: 1671 GSSVQEVNTRDWHKKY----PFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENL 1726
V+E + K++ FG + F ++ GK++ S N E V E++ NL
Sbjct: 497 AEIVKE---STYQKRFLQGNMFGSFSFINVGLGKEEFG-DGHSPKNMVEIAVVSEILTNL 552
Query: 1727 LATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYID------FNTIDGFQGQ 1780
L S+ +G+ISPY+ Q+ ++ + GD+ S D ++DGFQG
Sbjct: 553 LKV-SSETKTKMSVGVISPYKAQVSAIQER----IGDKYTSVSDNLFTLNVRSVDGFQGG 607
Query: 1781 EKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL 1828
E+DIIIIS VR++ N ++GFL + +R NVALTRA+ LW++G+ ++L
Sbjct: 608 EEDIIIISTVRSNCNG-NIGFLSNRQRANVALTRARHCLWVIGNERTL 654
>YKL017c [L] KOG1803 DNA helicase
Length = 683
Score = 153 bits (386), Expect = 3e-36
Identities = 165/595 (27%), Positives = 277/595 (45%), Gaps = 131/595 (22%)
Query: 1270 SEIHALKVMQMTTVEREYTSLKGL-----PYYD-LLKQILKAQPSVPENISSTEVNRIKA 1323
S+++ LK + T R ++++ L P D +++ ++ +P +P N +S + +
Sbjct: 146 SKLYILKTTNVVTYNRMESTMRKLSEISSPIQDKIIQYLVNERPFIP-NTNSFQNIKSFL 204
Query: 1324 NFHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXX 1383
N +LN SQ TAI + ++I GPPGTGKT T++ ++ + K
Sbjct: 205 NPNLNDSQKTAINFAINND-LTIIHGPPGTGKTFTLIELIQQLLIKN------------- 250
Query: 1384 XXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVN 1443
+++LIC PSN +VD ++ RL V + ++RIG +
Sbjct: 251 ------------PEERILICGPSNISVDTILERLTPLVPNNL-------LLRIGHPARLL 291
Query: 1444 ESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQ-AKLNKEDGNPNSSLS 1502
+S K +L+ K +V+D ++Q+ +Q+ K L+ K KE+ N
Sbjct: 292 DSNKRHSLDILSKKN------TIVKD--ISQEIDKLIQENKKLKNYKQRKENWN------ 337
Query: 1503 SNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICST 1562
+I++ +DL++ RE ++K ++ +S I+ +T
Sbjct: 338 -----EIKLLRKDLKK------------REFKTIK-------------DLIIQSRIVVTT 367
Query: 1563 LSGSAHDVLASL------GVKFDTIIIDEACQCTELSSIIPL---RYGGKRCIMVGDPNQ 1613
L GS+ L SL FDT+IIDE Q E IPL + + ++ GD Q
Sbjct: 368 LHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQ 427
Query: 1614 LPPTVLSGAASDMKYN--QSLFVRM----QKNCSPYLLDVQYRMHPAISKFPSLEFYKGK 1667
LPPT+ + ++ +N +LF R+ K L+VQYRM+ I +FPS Y GK
Sbjct: 428 LPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGK 487
Query: 1668 LQDGSSVQE------------VNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTM-----SY 1710
L ++V + D K P Y G + Q T S
Sbjct: 488 LLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYD----TQGDEFQETADEATILGSK 543
Query: 1711 TNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIR-SYI 1769
N E + E +ENL + + N IG+ISPY Q+ ++ ++ D+++ + I
Sbjct: 544 YNEGEIAIVKEHIENLRSFNVPE----NSIGVISPYNAQVSHL----KKLIHDELKLTDI 595
Query: 1770 DFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGH 1824
+ +T+DGFQG+EKD+II+S VR+++ VGFLK+ RR+NVA+TR + L ++G+
Sbjct: 596 EISTVDGFQGREKDVIILSLVRSNE-KFEVGFLKEERRLNVAMTRPRRQLVVVGN 649
>At5g35970 [L] KOG1803 DNA helicase
Length = 750
Score = 150 bits (379), Expect = 2e-35
Identities = 166/628 (26%), Positives = 274/628 (43%), Gaps = 116/628 (18%)
Query: 1255 RIHRSHKFSNLLTLRSEIHALKVMQMTTVEREYTSLKGLP-YYDLLKQILKAQPSVPENI 1313
RI R H ++ LT AL ++Q ++++ S+ + + + I + + +
Sbjct: 203 RIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDW 262
Query: 1314 SSTEVNRIKANFHLNTSQATAI-LSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANT 1372
S E++ + ++SQ AI L + ++QGPPGTGKT + ++ + +
Sbjct: 263 SEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQG-- 320
Query: 1373 NSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPE 1432
++VL+ AP+NAAVD +V +L L+
Sbjct: 321 -------------------------ERVLVTAPTNAAVDNMVEKLLHLGLN--------- 346
Query: 1433 IVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNK 1492
IVR+G ++ +V +L E V+ KL F+ L+++K
Sbjct: 347 IVRVGNPARISSAVASKSLGEIVNSKLAS--------------FRAELERKK-------- 384
Query: 1493 EDGNPNSSLSSNEIADIQMEIRD------LRRLISEMGKQKDEIRESNSLKYRNREQNRR 1546
S+ D++ +RD +R+L+ ++GK +LK + +E +
Sbjct: 385 ----------SDLRKDLRQCLRDDVLAAGIRQLLKQLGK---------TLKKKEKETVKE 425
Query: 1547 KAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCI 1606
IL+ + ++ +T G+A ++ L FD ++IDEA Q E S IP+ G KRCI
Sbjct: 426 -----ILSNAQVVFATNIGAADPLIRRLET-FDLVVIDEAGQSIEPSCWIPILQG-KRCI 478
Query: 1607 MVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL---LDVQYRMHPAISKFPSLEF 1663
+ GDP QL P VLS A + SL R L L QYRM+ I+ + S E
Sbjct: 479 LSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEM 538
Query: 1664 YKGKLQDGSSVQEVNTRD-------WHKKYPFG------PYKFFDIVTGKQKQNTKTMSY 1710
Y G L+ SV D W + P PY + ++ T S
Sbjct: 539 YGGWLKSAPSVASHLLIDSPFVKATWITQCPLVLLDTRMPYGSLSVGCEERLDPAGTGSL 598
Query: 1711 TNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYID 1770
N E + + V +L+ S I + SPY Q+Q +R + + + ++
Sbjct: 599 YNEGEADIVVNHVISLIYAGVSPM----AIAVQSPYVAQVQLLRERLDDF---PVADGVE 651
Query: 1771 FNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVN 1830
TID FQG+E D +IIS VR++ N +VGFL D RRMNVA+TRA+ + ++ ++ +
Sbjct: 652 VATIDSFQGREADAVIISMVRSN-NLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICH 710
Query: 1831 NKLWKHLISDAKERNCLELACPGFLNPS 1858
N L+ + ++ A PG L S
Sbjct: 711 NTFLARLLRHIRYFGRVKHADPGSLGGS 738
>SPCC737.07c [L] KOG1803 DNA helicase
Length = 660
Score = 146 bits (369), Expect = 3e-34
Identities = 179/688 (26%), Positives = 288/688 (41%), Gaps = 123/688 (17%)
Query: 1191 ASINKNV-VRDTGINDSDLIVLGYFPDSSSSKPLTDKEFKRSNHTCLAK-IKEIKNSKGE 1248
A IN + V TG +I P S+ + L F + + + + K +
Sbjct: 55 ALINLRIGVVKTGFGGKTIIDFEKDPAFSNGEELPANSFSPGDVVSIRQDFQSSKKKRPN 114
Query: 1249 NMDLTFR--IHRSHKFSNLLTLRSE---------IHALKVMQMTTVER-EYTSL---KGL 1293
D++ + R H+ + L+SE + +K++ T ER +T L + +
Sbjct: 115 ETDISVEGVVTRVHERHISVALKSEEDIPSSVTRLSVVKLVNRVTYERMRHTMLEFKRSI 174
Query: 1294 PYY-DLLKQILKAQPSVPENISSTEVNRIKA-NFHLNTSQATAILSTVTTQGFSLIQGPP 1351
P Y + L L + +I + IK N LN SQ A+ ++ + SLI GPP
Sbjct: 175 PEYRNSLFYTLIGRKKADVSIDQKLIGDIKYFNKELNASQKKAVKFSIAVKELSLIHGPP 234
Query: 1352 GTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVD 1411
GTGKT T++ I+ + L +++L+C SN AVD
Sbjct: 235 GTGKTHTLVEIIQQLV---------------------------LRNKRILVCGASNLAVD 267
Query: 1412 ELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSA 1471
+V RL + +VR+G + S+ D +L+ G + ++++
Sbjct: 268 NIVDRLSSSGIP---------MVRLGHPARLLPSILDHSLDVL---SRTGDNGDVIR--G 313
Query: 1472 LNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIR 1531
+++ L K + + E +I IR+LR+
Sbjct: 314 ISEDIDVCLSKI--------------TKTKNGRERREIYKNIRELRK------------- 346
Query: 1532 ESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTE 1591
YR E K A I++ S ++ TL G+ L G +FD +IIDEA Q E
Sbjct: 347 -----DYRKYEA---KTVANIVSASKVVFCTLHGAGSRQLK--GQRFDAVIIDEASQALE 396
Query: 1592 LSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYLLDVQYRM 1651
IPL G + I+ GD QL P V S + + V+ Q + L++QYRM
Sbjct: 397 PQCWIPL-LGMNKVILAGDHMQLSPNVQSKRPYISMFER--LVKSQGDLVKCFLNIQYRM 453
Query: 1652 HPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHK----KYPFGPYKFFDIVTGKQK----- 1702
H ISKFPS FY KL V++ D + P F+D + Q+
Sbjct: 454 HELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLGNYQEDDRSE 513
Query: 1703 --QNTKTMSYTNPEETKVAIELVENLL-ATYESKYDFTNRIGIISPYREQMQNMRNQFRR 1759
QN S +N E ++ + LL A E+K I +++PY Q+ +R Q +
Sbjct: 514 DMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAK-----DIAVVTPYNAQVALIR-QLLK 567
Query: 1760 YFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSL 1819
G + ++ ++D QG+EK+ II S VR++D VGFL + RR+NVA+TR K L
Sbjct: 568 EKGIE----VEMGSVDKVQGREKEAIIFSLVRSND-VREVGFLAEKRRLNVAITRPKRHL 622
Query: 1820 WILGHHKSLVNNKLWKHLISDAKERNCL 1847
++G ++ + H D E N +
Sbjct: 623 CVIGDSNTVKWASEFFHQWVDFLEENAI 650
>Hs4504623 [L] KOG1803 DNA helicase
Length = 993
Score = 145 bits (366), Expect = 6e-34
Identities = 157/610 (25%), Positives = 263/610 (42%), Gaps = 119/610 (19%)
Query: 1252 LTFRIHRSHKFSNLLTLRSEIHALKVMQMTTVEREYTSLKGLPYY------DLLKQILKA 1305
+T SH F L + LK+ T R +L L Y L++ +
Sbjct: 114 VTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGR 173
Query: 1306 QPSVPENISSTEVNRIKA-NFHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVG 1364
P ++E++ + N L+TSQ A+ ++ + ++I GPPGTGKT T++ I+
Sbjct: 174 SAPSP----ASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEII- 228
Query: 1365 YFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDY 1424
+ + + KVL CAPSN AVD LV RL
Sbjct: 229 --------------------------LQAVKQGLKVLCCAPSNIAVDNLVERLA------ 256
Query: 1425 SGNTFRPEIVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRK 1484
+ I+R+G + ESV+ + +D L SD
Sbjct: 257 ---LCKQRILRLGHPARLLESVQ----QHSLDAVLARSD--------------------- 288
Query: 1485 MLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRES---NSLKYRNR 1541
S+ +ADI+ +D+ ++ + K +D+ +S N +K +
Sbjct: 289 -----------------SAQNVADIR---KDIDQVFVKNKKTQDKREKSNFRNEIKLLRK 328
Query: 1542 EQNRRKAQARI--LAESDIICSTLSGSAHDVLASLGVK--FDTIIIDEACQCTELSSIIP 1597
E R+ A + L ++++ +T +G++ D L + FD ++IDE Q E S IP
Sbjct: 329 ELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIP 388
Query: 1598 LRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL---LDVQYRMHPA 1654
L ++CI+ GD QLPPT +S A+ + SL R+ + + L VQYRMH A
Sbjct: 389 L-LKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQA 447
Query: 1655 ISKFPSLEFYKGKLQDGSSVQEVNTRDW----HKKYPFGPYKFFDIVTGK--QKQNTKTM 1708
I ++ S Y G++ SSV RD + P D + +
Sbjct: 448 IMRWASDTMYLGQVTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQ 507
Query: 1709 SYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSY 1768
S NP E ++ ++ L+ D I ++SPY Q+ +R +
Sbjct: 508 SKGNPGEVRLVSLHIQALVDAGVPARD----IAVVSPYNLQVDLLRQSLVHRHPE----- 558
Query: 1769 IDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL 1828
++ ++DGFQG+EK+ +I+S VR+ + VGFL + RR+NVA+TRA+ + ++ +++
Sbjct: 559 LEIKSVDGFQGREKEAVILSFVRS-NRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTV 617
Query: 1829 VNNKLWKHLI 1838
N+ K L+
Sbjct: 618 NNHAFLKTLV 627
>CE19303 [L] KOG1803 DNA helicase
Length = 693
Score = 143 bits (360), Expect = 3e-33
Identities = 140/532 (26%), Positives = 223/532 (41%), Gaps = 121/532 (22%)
Query: 1327 LNTSQATAILSTVTTQGFSL-IQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXX 1385
LN SQ A+ + + TQ L IQGPPGTGKT+ I IV + K
Sbjct: 239 LNPSQVAAVSAAMNTQRNLLCIQGPPGTGKTRVIAEIVHQLMKK---------------- 282
Query: 1386 XXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNES 1445
++KVL+CAP++ AV + DA
Sbjct: 283 -----------KKKVLVCAPTHVAVRNAM-------------------------DATTGR 306
Query: 1446 VKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSNE 1505
+ + EEK +++L L +D Q K
Sbjct: 307 MIEEMPEEKAEQQL-----------CLLANTKDEFQNHKSAS------------------ 337
Query: 1506 IADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSG 1565
++ ++++ +S M ++ + Y R R LA + STL
Sbjct: 338 ------KLEEIKKQLSTMSTSDPLYKKMSYEYYLIRNSIFRSIFYPKLA----VFSTLGT 387
Query: 1566 SAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRY--GGKRCIMVGDPNQLPPTVLSGAA 1623
S+ L D +I+DEA QCTE ++ +P+ K+ I+VGD QLP VLS A
Sbjct: 388 SSIQKLPEYHWNADVMIVDEAAQCTEPATWVPVLTTPSCKKLILVGDQKQLPAVVLSDKA 447
Query: 1624 SDMKYNQSLFVRMQKNCSP----YLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNT 1679
+ SL ++ + S LL+ QYRM+ I + + FY+ +L S+V ++
Sbjct: 448 MKGNFKLSLMEKLAEEFSSNNINILLNEQYRMNKKIMNWSNEVFYENQLTAHSTVSDITL 507
Query: 1680 RDWHKKYPF-----GPYKFFDI--VTGKQKQNTKTMSYTNPEETKVAIELVENLLATYES 1732
RD P P ++ V + + ++ S+TN +E + E V L+
Sbjct: 508 RDICPNLPEDHVLNNPIMMINMENVKDRSHEEFESHSFTNTDELNLVTEYVNRLVVDLGI 567
Query: 1733 KYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRA 1792
I +ISPY Q++ +R I +D NT+D FQG E+ ++I VR
Sbjct: 568 N---PKAIAVISPYYAQIEKLRRS--------IPFRVDVNTVDAFQGHERQVVIFCLVR- 615
Query: 1793 DDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNN----KLWKHLISD 1840
D++ +GFL + RR+NVA+TRA+ ++G+ + + N KL+KHL S+
Sbjct: 616 DNDEGQIGFLNETRRLNVAVTRARRQFVLIGNGRMMKGNKHLLKLYKHLQSE 667
>YER176w [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1121
Score = 132 bits (333), Expect = 4e-30
Identities = 151/577 (26%), Positives = 242/577 (41%), Gaps = 150/577 (25%)
Query: 1319 NRIK-ANFHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNX 1377
NR+K ++ LN SQ TA+ V +++QGPPGTGKT TI I+ I + +
Sbjct: 640 NRLKFSSDKLNRSQKTAV-EHVLNNSITILQGPPGTGKTSTIEEIIIQVIERFHAFP--- 695
Query: 1378 XXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIG 1437
+L A SN A+D + ++ E RP+I
Sbjct: 696 ----------------------ILCVAASNIAIDNIAEKIMEN---------RPQI---- 720
Query: 1438 RSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNP 1497
K L + K ++ D+ + + N ++
Sbjct: 721 ---------KILRILSKKKEQQYSDDHPLGEICLHNIVYK-------------------- 751
Query: 1498 NSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESD 1557
N D+Q+ RR G+ + ++ K +NR N+ +Q++I+ ++
Sbjct: 752 ------NLSPDMQVVANKTRR-----GEMISKSEDTKFYKEKNRVTNKVVSQSQIIFTTN 800
Query: 1558 IICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKR-CIMVGDPNQLPP 1616
I G V+ V +I+DEA Q +E S+++PL G R + VGD QL
Sbjct: 801 IAAG---GRELKVIKECPV----VIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQL-- 851
Query: 1617 TVLSGAASDMKYNQSLFVRMQKNCS---PYLLDVQYRMHPAISKFPSLEFYKGKLQDGSS 1673
S ++ + SLF R+ N + P +LD QYRMHP IS+FP + Y G+L+DG +
Sbjct: 852 ---SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGVT 908
Query: 1674 VQEVNTRDWHKKYPF--GPYKFFDIVTGKQKQNTKTM------SYTNPEETKVAIELVEN 1725
D K +P P F+ G + + T +Y N E +++++
Sbjct: 909 -------DEQKAWPGVQHPLFFYQCDLGPESRVRSTQRDIVGFTYENKHECVEIVKIIQI 961
Query: 1726 LLATYESKYDFTNRIGIISPYREQ--------------------MQNMRNQFRRY--FGD 1763
L+ + + IG+I+PY Q MQ ++ + G
Sbjct: 962 LMLDKKVPLE---EIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGS 1018
Query: 1764 Q------------IRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVA 1811
Q I + + T+D FQG EK II SCVR ++ +GFL+D RR+NVA
Sbjct: 1019 QGTAGSLQNNVINIINGLHVATVDSFQGHEKSFIIFSCVR-NNTENKIGFLRDKRRLNVA 1077
Query: 1812 LTRAKCSLWILGHHKSL-VNNKLWKHLISDAKERNCL 1847
LTRAK L ++G+ L + LWK I+ +E+ +
Sbjct: 1078 LTRAKHGLIVVGNKNVLRKGDPLWKDYITYLEEQEVI 1114
>Hs20470741 [L] KOG1805 DNA replication helicase
Length = 1060
Score = 120 bits (302), Expect = 2e-26
Identities = 98/311 (31%), Positives = 156/311 (49%), Gaps = 40/311 (12%)
Query: 1558 IICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPT 1617
I+ +T G H + + FD I+DEA Q ++ + PL + +R ++VGD QLPP
Sbjct: 738 IVATTCMGINHPIFSRK--IFDFCIVDEASQISQPICLGPLFFS-RRFVLVGDHQQLPPL 794
Query: 1618 VLSGAASDMKYNQSLFVRMQKNCSPYL-LDVQYRMHPAISKFPSLEFYKGKLQDGSSVQE 1676
VL+ A + ++SLF R+++N S + L VQYRM+ I + Y+GKL+ GS
Sbjct: 795 VLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVA 854
Query: 1677 ---VNTR---------DWHKKY-----------PFGPYKFFDIVTGKQKQNTKTMSYTNP 1713
+N R +++ Y P P F + + + +N
Sbjct: 855 NAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNV 914
Query: 1714 EETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNT 1773
E K+ + L + S D IGII+PYR+Q++ + + R G ++ NT
Sbjct: 915 TEAKLIVFLTSIFVKAGCSPSD----IGIIAPYRQQLKIINDLLARSIG-----MVEVNT 965
Query: 1774 IDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL----V 1829
+D +QG++K I+++S VR++ + T LKD+RR+NVA+TRAK L +LG SL
Sbjct: 966 VDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPP 1025
Query: 1830 NNKLWKHLISD 1840
KL HL S+
Sbjct: 1026 LEKLLNHLNSE 1036
>YHR164c [L] KOG1805 DNA replication helicase
Length = 1522
Score = 112 bits (279), Expect = 8e-24
Identities = 118/471 (25%), Positives = 207/471 (43%), Gaps = 72/471 (15%)
Query: 1438 RSDAVNESVKDLTLEEKVDKKLGGSD-----YEMVQDSALNQKFQDALQK---------- 1482
RSD NE ++ L ++ + K +D Y++ +D+ LN ++A+ K
Sbjct: 1013 RSDGGNEILRSLLVDNRAPKFRDANDDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALI 1072
Query: 1483 ------------RKMLQAKLNKEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEI 1530
++++ +++ +S + + + +I +++R+ I +G K ++
Sbjct: 1073 LGMPGTGKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTNISIMRLG-MKHKV 1131
Query: 1531 RESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVK-FDTIIIDEACQC 1589
N + S + +T +D+L +L K FD +I+DEA Q
Sbjct: 1132 HPDTQKYVPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQI 1191
Query: 1590 TELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL--LDV 1647
+ ++ PLRYG R IMVGD QLPP V + AA +SLF + + L +
Sbjct: 1192 SMPVALGPLRYGN-RFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTL 1250
Query: 1648 QYRMHPAISKFPSLEFYKGKLQDGSSV-------------------QEVNTRDW------ 1682
QYRM I + Y KL+ G++ + N++ W
Sbjct: 1251 QYRMCGDIVTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSRYRNESANSKQWLEDILE 1310
Query: 1683 -HKKYPFGPYKFF-DIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRI 1740
+K F Y DI+ +K N TN E ++ ++ VE +L + D I
Sbjct: 1311 PTRKVVFLNYDNCPDIIEQSEKDNI-----TNHGEAELTLQCVEGMLLSGVPCED----I 1361
Query: 1741 GIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVG 1800
G+++ YR Q++ ++ + F + ++ T D FQG++K IIIS VR +
Sbjct: 1362 GVMTLYRAQLRLLK----KIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGGA 1417
Query: 1801 FLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCLELAC 1851
LK+ RR+NVA+TRAK L I+G ++ + K ++ +ERN + C
Sbjct: 1418 LLKELRRVNVAMTRAKSKLIIIGSKSTIGSVPEIKSFVNLLEERNWVYTMC 1468
>Hs21703358_3 [A] KOG1804 RNA helicase
Length = 498
Score = 109 bits (272), Expect = 5e-23
Identities = 141/545 (25%), Positives = 229/545 (41%), Gaps = 88/545 (16%)
Query: 1327 LNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXX 1386
LN SQ A+ + + F++IQGPPGTGKT L IV +F K+N
Sbjct: 2 LNPSQNVAVREALE-KPFTVIQGPPGTGKTIVGLHIVFWF-HKSNQEQVQPGGPPRG--- 56
Query: 1387 XXXXXEQLLERQKVLICAPSNAAVDELV-LRLREGVLD----YSGNTFRPE--IVRIGRS 1439
E+ L +L C PSN +VD L L LR L YS E + R+G
Sbjct: 57 -----EKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSR 111
Query: 1440 DAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNS 1499
+ +S ++ G + ++ L+ + + A NP S
Sbjct: 112 KLLRKSPRE------------GRPNQSLRSITLHHRIRQA---------------PNPYS 144
Query: 1500 SLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDII 1559
S +++ D R E+ ++D + Y+ RK + L ++I
Sbjct: 145 S---------EIKAFDTRLQRGELFSREDLVW------YKKVLWEARKFE---LDRHEVI 186
Query: 1560 CSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRY--GGKRCIMVGDPNQLPPT 1617
T S +A L L V+ I++DEA TE ++IPL ++ +++GD QL P
Sbjct: 187 LCTCSCAASASLKILDVR--QILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPV 244
Query: 1618 VLSGAASDMKYNQSLFVRMQKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEV 1677
V + ++ ++SLF R ++ ++LD QYRMH I FPS+ FYK KL+ ++
Sbjct: 245 VKNERLQNLGLDRSLFERYHEDA--HMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRP 302
Query: 1678 NTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFT 1737
+ H P F V G ++ + N E+ E + T + T
Sbjct: 303 PSVLGHAGKESCPV-IFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRT 361
Query: 1738 ---NRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRA-- 1792
I +++PY Q + RR + + + ++I QG E +++S VR
Sbjct: 362 VEPQDIAVLTPYNAQASEISKALRR----EGIAGVAVSSITKSQGSEWRYVLVSTVRTCA 417
Query: 1793 ----DDNSTS------VGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAK 1842
D T +GF+ D ++NVA+TRA+ L ++G H L LW+ L+ +
Sbjct: 418 KSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCE 477
Query: 1843 ERNCL 1847
+ L
Sbjct: 478 AQQTL 482
>Hs14769950_3 [A] KOG1804 RNA helicase
Length = 498
Score = 109 bits (272), Expect = 5e-23
Identities = 141/545 (25%), Positives = 229/545 (41%), Gaps = 88/545 (16%)
Query: 1327 LNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXX 1386
LN SQ A+ + + F++IQGPPGTGKT L IV +F K+N
Sbjct: 2 LNPSQNVAVREALE-KPFTVIQGPPGTGKTIVGLHIVFWF-HKSNQEQVQPGGPPRG--- 56
Query: 1387 XXXXXEQLLERQKVLICAPSNAAVDELV-LRLREGVLD----YSGNTFRPE--IVRIGRS 1439
E+ L +L C PSN +VD L L LR L YS E + R+G
Sbjct: 57 -----EKRLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSR 111
Query: 1440 DAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNS 1499
+ +S ++ G + ++ L+ + + A NP S
Sbjct: 112 KLLRKSPRE------------GRPNQSLRSITLHHRIRQA---------------PNPYS 144
Query: 1500 SLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDII 1559
S +++ D R E+ ++D + Y+ RK + L ++I
Sbjct: 145 S---------EIKAFDTRLQRGELFSREDLVW------YKKVLWEARKFE---LDRHEVI 186
Query: 1560 CSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRY--GGKRCIMVGDPNQLPPT 1617
T S +A L L V+ I++DEA TE ++IPL ++ +++GD QL P
Sbjct: 187 LCTCSCAASASLKILDVR--QILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPV 244
Query: 1618 VLSGAASDMKYNQSLFVRMQKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEV 1677
V + ++ ++SLF R ++ ++LD QYRMH I FPS+ FYK KL+ ++
Sbjct: 245 VKNERLQNLGLDRSLFERYHEDA--HMLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRP 302
Query: 1678 NTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFT 1737
+ H P F V G ++ + N E+ E + T + T
Sbjct: 303 PSVLGHAGKESCPV-IFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRT 361
Query: 1738 ---NRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRA-- 1792
I +++PY Q + RR + + + ++I QG E +++S VR
Sbjct: 362 VEPQDIAVLTPYNAQASEISKALRR----EGIAGVAVSSITKSQGSEWRYVLVSTVRTCA 417
Query: 1793 ----DDNSTS------VGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAK 1842
D T +GF+ D ++NVA+TRA+ L ++G H L LW+ L+ +
Sbjct: 418 KSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCE 477
Query: 1843 ERNCL 1847
+ L
Sbjct: 478 AQQTL 482
>7291108 [L] KOG1805 DNA replication helicase
Length = 1119
Score = 108 bits (271), Expect = 7e-23
Identities = 102/381 (26%), Positives = 168/381 (43%), Gaps = 68/381 (17%)
Query: 1521 SEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDT 1580
S + KQ +EI E K + KA L + I+ T G H + +FD
Sbjct: 733 SRIHKQLEEISEERLTKDCKTVEELEKA----LGQPSIVGVTCLGCGHPLFQRR--QFDY 786
Query: 1581 IIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNC 1640
I+DEA Q + + + PL + K ++VGDP QLPP V S A +++LF R+
Sbjct: 787 CIVDEATQVLQPTVLRPLIHCSK-FVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEK 845
Query: 1641 SPYLLDVQYRMHPAISKFPSLEFYKGKLQDGS---------------------------- 1672
+ +L +QYRM+ I++ + Y G L+ S
Sbjct: 846 ATAVLSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHL 905
Query: 1673 --SVQEVNTRDWHKK---YPFGPYKFFDIVTG-------------KQKQNTKTMSYTNPE 1714
+V +NT D ++ + + + D + K + YTN
Sbjct: 906 EQAVTLINTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYC 965
Query: 1715 ETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTI 1774
E + + L+ LL +S Y+ +RIG+I+PYR Q++ + ++ + ++ NT+
Sbjct: 966 EAGIVMHLLRYLL---KSGYE-ASRIGVIAPYRAQVELFKK-----LASKLDTDLECNTV 1016
Query: 1775 DGFQGQEKDIIIISCVRAD------DNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSL 1828
D FQG++K++II SC + + S L+D RR+ VA+TRAK L +LG K L
Sbjct: 1017 DQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCL 1076
Query: 1829 VNNKLWKHLISDAKERNCLEL 1849
++ L +R L+L
Sbjct: 1077 EQYGPFRQLFKHIPDRCRLKL 1097
>7301121 [L] KOG1807 Helicases
Length = 903
Score = 108 bits (270), Expect = 9e-23
Identities = 127/546 (23%), Positives = 236/546 (42%), Gaps = 87/546 (15%)
Query: 1312 NISSTEVNRIKANFHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKAN 1371
N+ ++++ + HLN SQ TA + + FS+IQGPPGTGKT + +V I A
Sbjct: 435 NMKPFTLDKLPEDLHLNESQKTAFKEALCRE-FSIIQGPPGTGKTHLSVQLVNSLIQNAK 493
Query: 1372 TNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRP 1431
L +++ +N ++D+ ++++ + +
Sbjct: 494 A----------------------LGTGPIIVLTYTNNSLDKFLVKI---------SRYTQ 522
Query: 1432 EIVRIGRSDAVNESVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLN 1491
EI+R G + + L + +L + + +N ++++ + + L A +
Sbjct: 523 EILRFGNQSR-DPQISKFNLSTTIKPELVPPRLKRIW-WLVNCEYKEKFRNLQGLYANFD 580
Query: 1492 KEDGNPNSSLSSNE-IADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQA 1550
+ + +L++ E + + I LR + Q
Sbjct: 581 GSEESYQDTLAAQEKLNQVAERIETLRMVF----------------------------QF 612
Query: 1551 RILAESDIICSTLSGSA-HDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVG 1609
+ E D++ T + +A H+ L L ++ ++ +EA + E + L + I+VG
Sbjct: 613 FLAREKDLLAMTTTCAARHNFLFRL-LQSKCVLFEEAAEIQEAHIVACLTPHTEHVILVG 671
Query: 1610 DPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL-LDVQYRMHPAISKFPSLEFYKGKL 1668
D QL P SG+ + SLF R+ P+ L++QYRM IS+ Y L
Sbjct: 672 DHKQLQP--FSGSRKVPQI--SLFERLIVAGLPFSRLNLQYRMRSCISELLVPSIYDELL 727
Query: 1669 QDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLA 1728
S + + R K F + + + MS N E V +L E L+
Sbjct: 728 CSESVKEYEDIRLMSKNLYF-------VQHNQPEHCMSDMSIGNLYEAGVLAKLTEFLIQ 780
Query: 1729 TYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIIS 1788
+ K+ + I I+SPY Q++ ++N + + RS + ++D FQG E +I+++S
Sbjct: 781 KAQYKH---SDIVILSPYNGQIECIKNALPQNY----RSTVQVASVDSFQGLEANIVLLS 833
Query: 1789 CVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNN--KLWKHLISDAKERNC 1846
VR++ S +GFL+ R+ VAL+RA+ +L+I+G+ L + K+W ++ KE N
Sbjct: 834 LVRSNI-SGRIGFLRQANRVCVALSRARWALYIVGNVTILKDTFPKIWNPIVKRLKENNA 892
Query: 1847 LELACP 1852
+ A P
Sbjct: 893 IGEAFP 898
>7292369_2 [A] KOG1804 RNA helicase
Length = 754
Score = 107 bits (268), Expect = 1e-22
Identities = 88/299 (29%), Positives = 146/299 (48%), Gaps = 47/299 (15%)
Query: 1578 FDTIIIDEACQCTELSSIIPLRYGGKR---CIMVGDPNQLPPTVLSGAASDMKYNQSLFV 1634
F ++ DEA QCTE +++P+ K+ ++ GDP QL V S AS M ++ S
Sbjct: 422 FTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLE 481
Query: 1635 RMQKNCSPYLLDVQ-------------------YRMHPAISKFPSLEFYKGKLQDGSSVQ 1675
R+ + SPY D+Q YR P+I S FY +L S +
Sbjct: 482 RLLER-SPYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEK 540
Query: 1676 EVNTR----------DWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVEN 1725
+ + K P FF + G+ +QN + S+ NP+E + E+
Sbjct: 541 DSRESRLLSKLRCVFESEKDIPQAHGTFFYGIIGENRQNNDSPSWFNPQEVR---EVFLM 597
Query: 1726 LLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDII 1785
+A Y + ++IGII+PY++Q++ +R+ F G + +++ FQGQE+DII
Sbjct: 598 TIALYRANVT-ADQIGIITPYQKQVKMLRSMF---IGTDV-VMPKIGSVEEFQGQERDII 652
Query: 1786 IISCVRAD------DNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLI 1838
+IS VR+ D S+GF++ +R+NVA++RA+ + I G+ L ++ W+ LI
Sbjct: 653 LISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLI 711
>Hs14211540 [A] KOG1804 RNA helicase
Length = 1003
Score = 107 bits (266), Expect = 3e-22
Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 45/332 (13%)
Query: 1553 LAESDIICSTLSGSAHDVLASLGVK-FDTIIIDEACQCTELSSIIPLRY---------GG 1602
L E ++ +TL + V A + F I IDEA C E S++ + G
Sbjct: 613 LQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPG 672
Query: 1603 KRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL-------------LDVQY 1649
+ ++ GDP QL P + S SL R+ S Y L Y
Sbjct: 673 GQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNY 732
Query: 1650 RMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDI----VTGKQKQNT 1705
R HP I P+ +Y+G+LQ + +V R+ ++ P + F I V GK ++
Sbjct: 733 RSHPTILDIPNQLYYEGELQ---ACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREG 789
Query: 1706 KTMSYTNPEETKVAIELVENLLATYESKYDFT---NRIGIISPYREQMQNMRNQFRRYFG 1762
+ S+ NPEE ++ LLA K +G+ISPYR+Q++ +R +
Sbjct: 790 NSPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITK-LD 848
Query: 1763 DQIRSYIDFN-----TIDGFQGQEKDIIIISCVRAD------DNSTSVGFLKDFRRMNVA 1811
++R D +++ FQGQE+ +I+IS VR+ D ++GFLK+ +R NVA
Sbjct: 849 RELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVA 908
Query: 1812 LTRAKCSLWILGHHKSLVNNKLWKHLISDAKE 1843
+TRAK L I+G+ L ++ WK + KE
Sbjct: 909 VTRAKALLIIVGNPLLLGHDPDWKVFLEFCKE 940
>At1g08840 [L] KOG1805 DNA replication helicase
Length = 1296
Score = 105 bits (261), Expect = 1e-21
Identities = 103/348 (29%), Positives = 164/348 (46%), Gaps = 38/348 (10%)
Query: 1528 DEIRES--NSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDE 1585
+E+RES +++ + E ++K L + ++ ST G +L + +FD IIDE
Sbjct: 969 EEVRESCFSAMNMCSVEDIKKK-----LDQVKVVASTCLGINSPLLVNR--RFDVCIIDE 1021
Query: 1586 ACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYLL 1645
A Q SI PL + ++VGD QLPP V S A + SLF R+ + P +
Sbjct: 1022 AGQIALPVSIGPLLFAST-FVLVGDHYQLPPLVQSTEARENGMGISLFRRLSE-AHPQAI 1079
Query: 1646 DV---QYRMHPAISKFPSLEFYKGKLQDGSSV---------QEVNTRDWHKKY--PFGPY 1691
V QYRM I + + Y +L GS+ +T W KK P
Sbjct: 1080 SVLQNQYRMCRGIMELSNALIYGDRLCCGSAEVADATLVLSTSSSTSPWLKKVLEPTRTV 1139
Query: 1692 KFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQ 1751
F + + + + NP E + E+VE L+ D IGII+PY Q
Sbjct: 1140 VFVNTDMLRAFEARDQNAINNPVEASIIAEIVEELVNNGVDSKD----IGIITPYNSQAS 1195
Query: 1752 NMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDN--STSVGFLKDFRRMN 1809
+++ + ++ +TID +QG++KD I++S VR+ + S++ L D+ R+N
Sbjct: 1196 LIQHAIPT-------TPVEIHTIDKYQGRDKDCILVSFVRSREKPRSSASSLLGDWHRIN 1248
Query: 1810 VALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCLELACPGFLNP 1857
VALTRAK L ++G ++L L L++ KE++ + PG L P
Sbjct: 1249 VALTRAKKKLIMVGSQRTLSRVPLLMLLLNKVKEQSGILNLLPGDLKP 1296
Score = 52.4 bits (124), Expect = 7e-06
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 42/158 (26%)
Query: 1296 YDLLKQILKAQPSVPENIS----STEVNRIKANFHLNTSQATAILSTVTTQGFSLIQGPP 1351
+++ K I+ +P +N S ++ I + LN Q AIL +T + ++LI G P
Sbjct: 853 HNIRKMIVDLEPPRFDNGSILSQDPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMP 912
Query: 1352 GTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVD 1411
GTGKT T++ V L+ +L+ + +N+AVD
Sbjct: 913 GTGKTSTMVHAV---------------------------KALLIRGSSILLASYTNSAVD 945
Query: 1412 ELVLRLR-EGVLDYSGNTFRPEIVRIGRSDAVNESVKD 1448
L+++L+ +G+ E +RIGR +AV+E V++
Sbjct: 946 NLLIKLKAQGI----------EFLRIGRDEAVHEEVRE 973
>7299528 [L] KOG1806 DEAD box containing helicases
Length = 1170
Score = 102 bits (253), Expect = 8e-21
Identities = 148/588 (25%), Positives = 244/588 (41%), Gaps = 122/588 (20%)
Query: 1343 GFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLI 1402
G +L+ GPPGTGKT + I IS N N Q+ LI
Sbjct: 514 GLTLVVGPPGTGKTDVAVQI----ISNIYHNHPN---------------------QRTLI 548
Query: 1403 CAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRSDAVNESVKD-------------- 1448
SN A+++L ++ +D ++R+G + E+ KD
Sbjct: 549 VTHSNQALNQLFEKIMALDID------ERHLLRLGHGEEALETEKDYSRYGRVNYVLAKR 602
Query: 1449 ---LTLEEKVDKKLGGSD-----------YEMVQDSALNQKFQDALQKRK------MLQA 1488
L+ +K+ + LG S + + A +KFQ + K L+A
Sbjct: 603 MDLLSQVQKLQEALGVSGDNAYTCETAGYFYLYNVMARWEKFQSQISVHKGEADAEKLRA 662
Query: 1489 KLNKED------GNPNSSLSSNEIADIQMEIRDLR-RLISEMGKQKDEIRESNSLKYRNR 1541
+ KE + L D M+I R IS++ + +E R L+
Sbjct: 663 EFEKEFPFGKFFADAPQPLFKGANYDELMDIACSNFRYISDIFNELEEFRAFELLR---- 718
Query: 1542 EQNRRKAQARILAESDIICSTLSGSA--HDVLASLGVKFDTIIIDEACQCTELSSIIPLR 1599
+++ ++ E+ II T + +A L +LG ++D I+++E+ Q E+ + IPL
Sbjct: 719 -TGLDRSKYLLVKEAKIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLL 777
Query: 1600 YGG--------KRCIMVGDPNQLPPTVLSGAASDMKYN---QSLFVRMQKNCSPYL-LDV 1647
KR IM+GD +QLPP + + A KY+ QSLF R+ + P + LD
Sbjct: 778 LQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAF--QKYSNMEQSLFTRLVRLGVPTVDLDG 835
Query: 1648 QYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVT-----GKQK 1702
Q R +I YK + + +Q + RD +K+ G + ++ G +
Sbjct: 836 QGRARASI-----CSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINVEDFKGVGE 890
Query: 1703 QNTKTMSYTNPEETK--VAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRY 1760
Y N E + VA+ + LL +K I I++ Y Q +R+
Sbjct: 891 SEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAK------ISILTTYNGQKHLIRDVINAR 944
Query: 1761 FGDQ--IRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCS 1818
G+ I T+D +QGQ+ D I+IS VR + +VG L+D RR+ VA++RA+
Sbjct: 945 CGNNPLIGWPHKITTVDKYQGQQNDYILISLVR----TKAVGHLRDVRRLVVAMSRARLG 1000
Query: 1819 LWILGHHKSLVNNKLWKHLISDAKERNCLELACPGFLNPSDRYAQDTI 1866
L++ G SL N L + L+L+ L P D++ D +
Sbjct: 1001 LYVFG-RVSLFKNCLELQQTFKLLTQRPLKLS----LVPEDKFPTDRL 1043
>CE08664 [L] KOG1803 DNA helicase
Length = 633
Score = 101 bits (251), Expect = 1e-20
Identities = 107/405 (26%), Positives = 174/405 (42%), Gaps = 63/405 (15%)
Query: 1477 QDALQKRKMLQAKLNKEDG---NPNSSLSSNEIADI----------QMEIRDLRRLISEM 1523
++AL +M+ K K G + ++ + +NE D+ E+RDLR+
Sbjct: 128 REALANIRMMTKKTLKRMGIKVHEHALMDTNEYRDVINKSDRALMAAEEVRDLRKAFDN- 186
Query: 1524 GKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTI-- 1581
G+ + + + NR +N + A ++ + +T+ S D + KFD
Sbjct: 187 GEITENVLDEMRQSIINRVRN--EVGAEVIGNVRVAFATIGASFVDFVMK-HKKFDPCLC 243
Query: 1582 IIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRM---QK 1638
IIDEA Q E + P Y KR +M GDP QLP V + A S+ R+ +
Sbjct: 244 IIDEAAQVMEAQTW-PAVYKMKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKKN 302
Query: 1639 NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNT------------------- 1679
N S +L+ QYR + I+ + + FY +L+ E +
Sbjct: 303 NFSWIMLENQYRSNAKIATWSNTCFYHNQLKTDVKCHEYSLHTILNPQPKKFRNLFDPLV 362
Query: 1680 -------RDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYES 1732
RD K+ + FD T + + SY N E K+AI + LL
Sbjct: 363 LIDTSLERDVEKRLETYEHAVFD--TNSINKTKQGFSYANLAEAKIAIGHYQRLLKYGVQ 420
Query: 1733 KYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDF-----NTIDGFQGQEKDIIII 1787
D I II+PY+ Q ++ + FG + Y DF T+D QG+E +++I
Sbjct: 421 PSD----IAIITPYKGQT-SLVTKLMEEFGAET-GYTDFVQTTIGTVDSVQGKEYEVVIF 474
Query: 1788 SCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNK 1832
+ VR++ T +GF+ + RR+NV +TRAK +G+ L +K
Sbjct: 475 TMVRSNPRKT-MGFVSELRRLNVVITRAKRHFMFIGNGYLLAESK 518
>ECU05g1110 [L] KOG1803 DNA helicase
Length = 563
Score = 99.0 bits (245), Expect = 7e-20
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 47/299 (15%)
Query: 1539 RNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPL 1598
R+ + +RK A S ++ +TL S + KFD +++DEACQ +E S + +
Sbjct: 288 RDLRERQRKFVEEKQANSPVVFATLFSSLKEKR-----KFDWVLVDEACQASEAESFLAV 342
Query: 1599 RYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYLLDVQYRMHPAISKF 1658
G+ I+VGDP QL P S Y M LL+ QYRM + +F
Sbjct: 343 -VKGRAFILVGDPMQLCPETSS------LYESLALPTM-------LLNEQYRMPSDLLRF 388
Query: 1659 PSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKV 1718
+ FY+G+++ S+ +E F ++F++ + +S +N E
Sbjct: 389 SNEVFYRGQVK--SATRECTPVFGKSFILFVDTQYFELY------ESGGVSKSNIGEA-- 438
Query: 1719 AIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQ 1778
E+V +++ + + ++GII+PY Q+ +R ++ +T+DGFQ
Sbjct: 439 --EIVRSIVGILKEE-----QVGIIAPYTSQVLLLREMVD----------VEVSTVDGFQ 481
Query: 1779 GQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHL 1837
GQE+D II++ VR +D GFL + +R+NVALTR + L I+G ++ ++ ++ L
Sbjct: 482 GQERDYIILTLVRCNDRD-DFGFLDNGKRLNVALTRCRKGLVIVGDSRTFRRSETFRKL 539
>Hs14750549 [L] KOG1806 DEAD box containing helicases
Length = 1485
Score = 98.6 bits (244), Expect = 9e-20
Identities = 141/574 (24%), Positives = 234/574 (40%), Gaps = 102/574 (17%)
Query: 1303 LKAQPSVPENISSTEVNRIKANFHLNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSI 1362
L +P V N N+ K N T + G +++ GPPGTGKT + I
Sbjct: 777 LIVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI 836
Query: 1363 VGYFISKANTNSKNXXXXXXXXXXXXXXXEQLLERQKVLICAPSNAAVDELVLRLREGVL 1422
+ Q+ LI SN A+++L ++ +
Sbjct: 837 ISNIYHN-------------------------FPEQRTLIVTHSNQALNQLFEKIMALDI 871
Query: 1423 DYSGNTFRPEIVRIGRSDAVNESVKDLT---------------LEE--KVDKKLG-GSDY 1464
D ++R+G + E+ KD + LEE ++ K LG D
Sbjct: 872 D------ERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLEEVKRLQKSLGVPGDA 925
Query: 1465 EMVQDSA-------LNQKFQDALQKRKMLQAKL------------NKEDGNPNSSLSSNE 1505
++A + ++++ + K K + L ++ N +
Sbjct: 926 SYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPFHEYFANAPQPIFKGR 985
Query: 1506 IADIQMEIRD-LRRLISEMGKQKDEIRESNSLKYR-NREQNRRKAQARILAESDIICSTL 1563
+ MEI + R I ++ Q +E R S L+ +R + +A+I+A + C+
Sbjct: 986 SYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIA---MTCTHA 1042
Query: 1564 SGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGG--------KRCIMVGDPNQLP 1615
+ HD L LG K+D I+++EA Q E+ + IPL KR IM+GD +QLP
Sbjct: 1043 ALKRHD-LVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLP 1101
Query: 1616 PTVLSGAASDMKYN---QSLFVRMQKNCSPYL-LDVQYRMHPAISKFPSLEFYK-GKLQD 1670
P + + A KY+ QSLF R + P + LD Q R ++ + + G L
Sbjct: 1102 PVIKNMAF--QKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNLYNWRYKNLGNLPH 1159
Query: 1671 GSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENL-LAT 1729
+ E +T + Y F D G + Y N E + + L + L
Sbjct: 1160 VQLLPEFSTANAGLLYDFQLINVEDF-QGVGESEPNPYFYQNLGEAEYVVALFMYMCLLG 1218
Query: 1730 YESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQ--IRSYIDFNTIDGFQGQEKDIIII 1787
Y + ++I I++ Y Q +R+ R G+ I T+D FQGQ+ D I++
Sbjct: 1219 YPA-----DKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTVDRFQGQQNDYILL 1273
Query: 1788 SCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWI 1821
S VR + +VG L+D RR+ VA++RA+ L+I
Sbjct: 1274 SLVR----TRAVGHLRDVRRLVVAMSRARLGLYI 1303
>Hs20162560 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 239
Score = 97.4 bits (241), Expect = 2e-19
Identities = 71/205 (34%), Positives = 107/205 (51%), Gaps = 17/205 (8%)
Query: 1642 PYLLDVQYRMHPAISKFPSLEFYKGKLQDG-SSVQEVNTRDWHKKYPFGPYKFFDIVTGK 1700
P LL QYR HPAIS + FYKG L +G + ++ +W P F V G
Sbjct: 5 PILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWL------PTLCFYNVKGL 58
Query: 1701 QKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRY 1760
+ Q + S+ N E ++L+++L+A+ + + IG+I+ Y+ QM + +
Sbjct: 59 E-QIERDNSFHNVAEATFTLKLIQSLIASGIAG----SMIGVITLYKSQMYKLCHLLSAV 113
Query: 1761 -FGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSL 1819
F + +T+D FQG EK+III+SCVR + VGF+ +RMNVALTR K L
Sbjct: 114 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVR----TRQVGFIDSEKRMNVALTRGKRHL 169
Query: 1820 WILGHHKSLVNNKLWKHLISDAKER 1844
I+G+ L N+LW +I + R
Sbjct: 170 LIVGNLACLRKNQLWGRVIQHCEGR 194
>CE24674 [L] KOG1806 DEAD box containing helicases
Length = 1212
Score = 97.1 bits (240), Expect = 3e-19
Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 38/297 (12%)
Query: 1552 ILAESDIICSTLSGSA--HDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGG------- 1602
++ E+ II T + +A + L LG ++D I+++EA Q E+ + IPL
Sbjct: 710 LVKEAKIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHNR 769
Query: 1603 -KRCIMVGDPNQLPPTVLSGAASDMKYN---QSLFVRMQKNCSPYL-LDVQYRMHPAISK 1657
KR IM+GD +QLPP V + A KY+ QSLF R+ + P + LD Q R I+
Sbjct: 770 LKRWIMIGDHHQLPPVVQNQAFQ--KYSNMEQSLFARLVRLSVPNVQLDRQGRARAQIA- 826
Query: 1658 FPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFG---PYKFFDI--VTGKQKQNTKTMSYTN 1712
E Y+ + ++ V+ + G P++F DI G + Y N
Sbjct: 827 ----ELYQWRYNGLGNLPHVDGLPQFQNANAGFAFPFQFIDIPDFNGHGETQPSPHFYQN 882
Query: 1713 PEETKVAIELVENLLATYESKYDF-TNRIGIISPYREQMQNMRNQFRRYFGDQ--IRSYI 1769
E + A L TY + +I I++ Y Q Q +R+ F+R I
Sbjct: 883 LGEAEYACALY-----TYMRILGYPAEKISILTTYNGQAQLIRDVFQRRCDTNPLIGMPA 937
Query: 1770 DFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHK 1826
+T+D +QGQ+ D II+S V+ + ++G ++D RR+ VAL+RA+ L++LG K
Sbjct: 938 KVSTVDKYQGQQNDFIILSLVK----TRNIGHIRDVRRLVVALSRARLGLYVLGRSK 990
>CE06677 [L] KOG1807 Helicases
Length = 2219
Score = 96.3 bits (238), Expect = 4e-19
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 31/332 (9%)
Query: 1537 KYRNREQNRRKAQARILAE----SDIICSTLSGSAH--DVLASLGVKFDTIIIDEACQCT 1590
+YR +N + AQ R+ AE + II +T +G + L +G + +I++EA +
Sbjct: 1185 EYREACENFKNAQNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGPRI--LIVEEAAEVL 1242
Query: 1591 ELSSIIPLRYGGKRCIMVGDPNQLPPTVLS---GAASDMKYNQSLFVRMQKNCSPYL-LD 1646
E I + + +M+GD QL P G A ++ S+F R+ + P+ L
Sbjct: 1243 EAHIISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRI--SMFERLVERGLPFSQLR 1300
Query: 1647 VQYRMHPAIS-KFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNT 1705
Q+RM+ IS K L FY +V + + F +++
Sbjct: 1301 QQHRMNLTISDKIVKLSFY-------DNVTDAENVGLYPDVQGMATNLFFWSHTSMEESP 1353
Query: 1706 KTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQI 1765
+S+ N E + + LV++LL + Y TN I +++ Y Q M ++ FG
Sbjct: 1354 DEVSWLNKHEISMTVALVKHLL---KQNYT-TNDIVVLATYSAQKNLMYREYANVFGSTP 1409
Query: 1766 RS-YIDFNTIDGFQGQEKDIIIISCVRADDN---STSVGFLKDFRRMNVALTRAKCSLWI 1821
S I T+D FQG+E+ I+I+S VR+ +T +GFL R+ VALTRA+ ++I
Sbjct: 1410 DSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQHGMYI 1469
Query: 1822 LGHHKSLVNN-KLWKHLISDAKERNCLELACP 1852
+G+ ++NN +LW ++++ + N +E P
Sbjct: 1470 IGNGAYIMNNSELWNKIVNNLRRSNLIEYNLP 1501
>At2g38770 [L] KOG1806 DEAD box containing helicases
Length = 1444
Score = 96.3 bits (238), Expect = 4e-19
Identities = 126/536 (23%), Positives = 221/536 (40%), Gaps = 84/536 (15%)
Query: 1330 SQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNXXXXXXXXXXXXX 1389
+Q AI+S + G +++ GPPGTGKT T + I+ N S+
Sbjct: 869 TQVGAIISGIQP-GLTMVVGPPGTGKTDTAVQILNVLYH--NCPSQRTLIITHSNQALND 925
Query: 1390 XXEQLLERQKVLICAPSNAAVDELVLRLREGV------LDYS--GNTFRPEIVRIGRSDA 1441
E+++ER P+ +LRL +G LD+S G + R+
Sbjct: 926 LFEKIMERD-----VPAR-----YLLRLGQGEQELATDLDFSRQGRVNAMLVRRLELLSE 975
Query: 1442 VNESVKDLTLEEKVDKKLGGSDY----------EMVQDSALNQKFQDALQKRKMLQAKLN 1491
V + L L E V + Y E+ + + + + +
Sbjct: 976 VERLARSLQLPEDVGYTCETAGYFWLLHVYSRWELFLAACAGNEDNQSFVRDRFPFKDFF 1035
Query: 1492 KEDGNPNSSLSSNEIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRK---- 1547
+ P + S E ++R + S + E+ E + + +R
Sbjct: 1036 SDTPKPVFNGESFE-----KDMRAAKGCFSHLKTVFQELEECRAFELLKSTADRANYLMT 1090
Query: 1548 AQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGG----- 1602
QA+I+A + C+ + D L LG K+D ++++E+ Q E+ + IP+
Sbjct: 1091 KQAKIVA---MTCTHAALKRRDFL-QLGFKYDNLLMEESAQILEIETFIPMLLQRQEDGH 1146
Query: 1603 ---KRCIMVGDPNQLPPTVLSGAASDMKY-NQSLFVRMQKNCSPYL-LDVQYRMHPAISK 1657
KRCI++GD +QLPP V + A + +QSLF R + PY+ L+ Q R P+++K
Sbjct: 1147 ARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGRARPSLAK 1206
Query: 1658 FPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVT-----GKQKQNTKTMSYTN 1712
Y + +D + V ++ G + +V G+ + Y N
Sbjct: 1207 -----LYNWRYRDLGDLSIVKEAPIFQRANAGFSYEYQLVNVPDYEGRGESTPSPWFYQN 1261
Query: 1713 PEETKVAIEL-VENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRR------YFGDQI 1765
E + + + + L Y + N+I I++ Y Q +R+ R + G
Sbjct: 1262 QGEAEYIVSVYIYMRLLGYPA-----NKISILTTYNGQKLLIRDVINRRCVPYPFIGPPS 1316
Query: 1766 RSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWI 1821
+ T+D FQGQ+ D I++S VR + VG L+D RR+ VA++RA+ L++
Sbjct: 1317 K----VTTVDKFQGQQNDFILLSLVR----TRFVGHLRDVRRLVVAMSRARLGLYV 1364
>Hs14786304_1 [L] KOG1807 Helicases
Length = 1839
Score = 96.3 bits (238), Expect = 4e-19
Identities = 106/401 (26%), Positives = 188/401 (46%), Gaps = 33/401 (8%)
Query: 1468 QDSALNQKFQDALQKRKMLQ-AKLNKEDGNPNSSLSSNEIADI-QMEIRD---LRRLISE 1522
Q+ A + QK+KM + K N ++ +NEI D+ Q+++ L RL +
Sbjct: 880 QEQATGEWQTQRNQKKKMKKRVKDELRKLNTMTAAEANEIEDVWQLDLSSRWQLYRLWLQ 939
Query: 1523 MGKQKDEIRESNSLKYRNREQNRRKAQAR------ILAESDIICSTLSGSAHDVLASLGV 1576
+ Q D R+ S + + R R A+ R IL ++ ++ T +G+A V
Sbjct: 940 L-YQADTRRKILSYERQYRTSAERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKV 998
Query: 1577 KFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTV-LSGAASDMKYNQSLFVR 1635
+ +I++EA + E +I L + I++GD QL P+ + A + SLF R
Sbjct: 999 EPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFER 1058
Query: 1636 MQKNCSPYL-LDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFF 1694
+ K P++ L+ Q+RM P I++ + Y+ L++ SV + + K FF
Sbjct: 1059 LVKVNIPFVRLNYQHRMCPEIARLLTPHIYQD-LENHPSVLK-----YEKIKGVSSNLFF 1112
Query: 1695 DIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMR 1754
+++ + S+ N E +EL + L +Y ++I I++ Y Q+ +R
Sbjct: 1113 VEHNFPEQEIQEGKSHQNQHEAHFVVELCKYFLC---QEY-LPSQITILTTYTGQLFCLR 1168
Query: 1755 NQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTR 1814
+R ++ +D +QG+E DII++S VR++ VGFL+ R+ VAL+R
Sbjct: 1169 KLMPAKTFAGVRVHV----VDKYQGEENDIILLSLVRSNQEG-KVGFLQISNRICVALSR 1223
Query: 1815 AKCSLWILGHHKSLVNNKLWKHLISDAKERN----CLELAC 1851
AK ++ +G+ + L LW +I +E N L L C
Sbjct: 1224 AKKGMYCIGNMQMLAKVPLWSKIIHTLRENNQIGPMLRLCC 1264
>At1g05460 [A] KOG1804 RNA helicase
Length = 1002
Score = 95.9 bits (237), Expect = 6e-19
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 1578 FDTIIIDEACQCTELSSIIPLRYGGKRC------IMVGDPNQLPPTVLSGAASDMKYNQS 1631
F I++DEA Q +E ++I + C ++ GDP QL P + S A + +S
Sbjct: 539 FTHILLDEAGQASEPENMIAV---SNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKS 595
Query: 1632 LFVRMQKNCSPYL---------LDVQYRMHPAISKFPSLEFYKGKL----QDGSSVQEVN 1678
R+ + C Y L YR HP I PS FY G+L +D SV
Sbjct: 596 YLERLFE-CDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASL 654
Query: 1679 TRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTN 1738
+K++P Y + G ++ S+ N E IE ++ L A + +
Sbjct: 655 NFLPNKEFPMVFYG----IQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEE--- 707
Query: 1739 RIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRAD----- 1793
IG+I+PYR+Q+ ++ R +++ +++ FQGQEK +IIIS VR+
Sbjct: 708 DIGVITPYRQQVMKIKEVLDRLDMTEVK----VGSVEQFQGQEKQVIIISTVRSTIKHNE 763
Query: 1794 -DNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCLE 1848
D + +GFL + RR NVA+TRA L I+G+ + + W L+ + N +
Sbjct: 764 FDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQ 819
>SPBC16D10.04c [L] KOG1805 DNA replication helicase
Length = 1398
Score = 95.5 bits (236), Expect = 8e-19
Identities = 89/306 (29%), Positives = 141/306 (45%), Gaps = 42/306 (13%)
Query: 1558 IICSTLSGSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPT 1617
+ CS+L G H + KFD IIDEA Q + PL+ K ++VGD QLPP
Sbjct: 1043 VACSSL-GVYHSIFNKR--KFDYCIIDEASQIPLPICLGPLQLAEK-FVLVGDHYQLPPL 1098
Query: 1618 VLSGAASDMKYNQSLFVRMQKNCSPYL--LDVQYRMHPAISKFPSLEFYKGKLQDGSSV- 1674
V + S + SLF + + + L +QYRM+ I+ S Y G L GS
Sbjct: 1099 VKNSRTSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTI 1158
Query: 1675 -----------------QEVNTRDWHKKY--PFGPYKFF---DIVTGKQKQNTKTMSYTN 1712
++ W K P FF DI+ + K N N
Sbjct: 1159 SQKKLILPKAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTN-------N 1211
Query: 1713 PEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFN 1772
E L+E ++++ + + IGIIS Y+ Q++ + + + + I+ N
Sbjct: 1212 ILENHTEAFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNLKSF------TEIEIN 1265
Query: 1773 TIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNK 1832
T+D +QG++KDII+IS VR++ + L+D+ R+NVAL+RAK + G +L ++
Sbjct: 1266 TVDRYQGRDKDIILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSSN 1325
Query: 1833 LWKHLI 1838
+ HL+
Sbjct: 1326 IVSHLL 1331
>Hs14251207_2 [A] KOG1804 RNA helicase
Length = 776
Score = 95.5 bits (236), Expect = 8e-19
Identities = 95/313 (30%), Positives = 146/313 (46%), Gaps = 41/313 (13%)
Query: 1558 IICSTLSGSAHDVLASLGVK---FDTIIIDEACQCTELSSIIPLRYGGK---RCIMVGDP 1611
II +T S S + +GV+ F + +DEA Q +E +IPL + ++ GDP
Sbjct: 424 IIITTCSSSG--LFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDP 481
Query: 1612 NQLPPTVLSGAASDMKYNQSLFVRMQKN------------C---SPYL---LDVQYRMHP 1653
QL P + S A N S R+ C +P L L YR H
Sbjct: 482 MQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRSHE 541
Query: 1654 AISKFPSLEFYKGKLQDGSSVQEVNTR-DWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTN 1712
A+ PS FY +L+ + V + W K G F V G + + K+ S+ N
Sbjct: 542 ALLMLPSRLFYHRELEVCADPTVVTSLLGWEKLPKKGFPLIFHGVRGSEAREGKSPSWFN 601
Query: 1713 PEETKVAIELVEN--LLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYID 1770
P E A++++ LLA S + IG+I+PYR+Q++ +R R I+
Sbjct: 602 PAE---AVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIRILLRNVDLMDIK---- 654
Query: 1771 FNTIDGFQGQEKDIIIISCVRA-----DDNSTSVGFLKDFRRMNVALTRAKCSLWILGHH 1825
+++ FQGQE +IIIS VR+ +D+ +GFL + +R NVA+TR K L +LG+
Sbjct: 655 VGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNP 714
Query: 1826 KSLVNNKLWKHLI 1838
LV + + L+
Sbjct: 715 HVLVRDPCFGALL 727
>7303245 [A] KOG1804 RNA helicase
Length = 1194
Score = 90.1 bits (222), Expect = 3e-17
Identities = 94/362 (25%), Positives = 160/362 (43%), Gaps = 34/362 (9%)
Query: 1510 QMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHD 1569
Q + R L R+ S ++ + + L+Y N + + + I+ TLS +
Sbjct: 550 QSQPRPLTRIFSANCDRRIDNIDDLLLEYSNMYTVHFYPAVQAVHQYRIVICTLSLAGKL 609
Query: 1570 VLASLGVK--FDTIIIDEACQCTE---LSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAAS 1624
+ + +DEA TE L I I+ GD QL P + S A+
Sbjct: 610 STGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRAN 669
Query: 1625 DMKYNQSLFVRM-QKNC------SPYLLDVQ------YRMHPAISKFPSLEFYKGKLQDG 1671
+ +LF R+ Q+ C Y VQ +R HP I + +Y+G L+
Sbjct: 670 EWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTE 729
Query: 1672 SSVQEV-NTRDW----HKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENL 1726
+ ++ V +W + +P F V G ++S N +E V ++ V++L
Sbjct: 730 APMEIVCRFHNWFYLPNATFPI----MFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDL 785
Query: 1727 LAT-YESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDII 1785
+ + IGIISPY+ Q Q ++ Q QI D +++ FQG+EK +I
Sbjct: 786 MYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQI----DCGSVELFQGKEKHVI 841
Query: 1786 IISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERN 1845
I+S VR+ + +GFL + RR+NV L+R L ++G+ ++L N ++H+I + R
Sbjct: 842 IVSFVRSF--TPKLGFLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNRK 899
Query: 1846 CL 1847
L
Sbjct: 900 TL 901
>CE23725 [L] KOG1805 DNA replication helicase
Length = 1069
Score = 86.3 bits (212), Expect = 5e-16
Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 39/323 (12%)
Query: 1527 KDEIRESN-SLKYRNREQNRRKAQAR-ILAESDIICSTLSGSAHDVLASLGVKFDTIIID 1584
KD+I++ K N A R ++ + I+ T ++L S FD +I+D
Sbjct: 732 KDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHVPRELLFSYR-HFDVVIVD 790
Query: 1585 EACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL 1644
EA E ++P+ + ++VGD QL P V+S A S ++Q++ +
Sbjct: 791 EASMVLE-PLLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGVV 849
Query: 1645 LDV--QYRMHPAISKFPSLEFYKGKLQDGSS--------------VQEVNTRDWHKKYPF 1688
+ + QYRM+ IS S FY+ +L G+ V + D +K
Sbjct: 850 VSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALS 909
Query: 1689 GPYK----FFD----IVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRI 1740
G K F D I + Q ++ + N E K+ EL + + + ++ I
Sbjct: 910 GDIKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPHE----I 965
Query: 1741 GIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVG 1800
G++S YR Q+ ++R G ++ NTID +QG+EK +II S ++++
Sbjct: 966 GVMSAYRRQVDHIR-------GILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSE 1018
Query: 1801 FLKDFRRMNVALTRAKCSLWILG 1823
LKD RR+NVALTRA+ L ++G
Sbjct: 1019 LLKDERRVNVALTRARQKLVVVG 1041
>CE02219 [L] KOG1805 DNA replication helicase
Length = 1105
Score = 86.3 bits (212), Expect = 5e-16
Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 39/323 (12%)
Query: 1527 KDEIRESN-SLKYRNREQNRRKAQAR-ILAESDIICSTLSGSAHDVLASLGVKFDTIIID 1584
KD+I++ K N A R ++ + I+ T ++L S FD +I+D
Sbjct: 768 KDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHVPRELLFSYR-HFDVVIVD 826
Query: 1585 EACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRMQKNCSPYL 1644
EA E ++P+ + ++VGD QL P V+S A S ++Q++ +
Sbjct: 827 EASMVLE-PLLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGVV 885
Query: 1645 LDV--QYRMHPAISKFPSLEFYKGKLQDGSS--------------VQEVNTRDWHKKYPF 1688
+ + QYRM+ IS S FY+ +L G+ V + D +K
Sbjct: 886 VSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALS 945
Query: 1689 GPYK----FFD----IVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRI 1740
G K F D I + Q ++ + N E K+ EL + + + ++ I
Sbjct: 946 GDIKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPHE----I 1001
Query: 1741 GIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVG 1800
G++S YR Q+ ++R G ++ NTID +QG+EK +II S ++++
Sbjct: 1002 GVMSAYRRQVDHIR-------GILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSE 1054
Query: 1801 FLKDFRRMNVALTRAKCSLWILG 1823
LKD RR+NVALTRA+ L ++G
Sbjct: 1055 LLKDERRVNVALTRARQKLVVVG 1077
>CE18803 [L] KOG1803 DNA helicase
Length = 646
Score = 84.0 bits (206), Expect = 2e-15
Identities = 86/333 (25%), Positives = 141/333 (41%), Gaps = 62/333 (18%)
Query: 1565 GSAHDVLASLGVKF------------DTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPN 1612
G+ VLA++G F IIDEA S P Y K ++ GDPN
Sbjct: 199 GNVLVVLATIGADFLNFVAKQEALDPSFCIIDEA-GLVMASETWPDVYKSKGFVIAGDPN 257
Query: 1613 QLPPTVLSGAASDMKYNQSLFVRMQK----------------NCSPYLLDVQYRMHPAIS 1656
+L P + + + +NQ + ++ N SP +LD QYR + I
Sbjct: 258 ELFPQIYNHDNGNGFFNQFCCLEQKRLETQVSILDCINEKTENLSPIILDTQYRSNETIM 317
Query: 1657 KFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGP--YKFFDIVTGKQKQ----------- 1703
+ + FY K++ + R + K F P + F + T +K+
Sbjct: 318 AWSNACFYNPKVKTDFKCGSLTLRSFFKGSKFNPLFHPFVIVDTSCEKEMEKRNETFEYL 377
Query: 1704 ----NTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRR 1759
N + Y N E K+A+ + LL D I II+PYR Q +R R+
Sbjct: 378 VFNNNNENEGYANVAEAKIAMHHYKQLLKLKVQASD----IAIITPYRGQSHVVRQMMRK 433
Query: 1760 YFGDQIRSYIDFNT----IDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRA 1815
+ ++ RS F+T +D G+E D++I + VR++ +G D RR++V +T+A
Sbjct: 434 FANEESRSDC-FDTHVGDVDKIVGKEFDVVIFTMVRSNP-KLDMGKAGDPRRLHVIITKA 491
Query: 1816 KCSLWILGHHKSLVN------NKLWKHLISDAK 1842
K +G+ L NKL+K+++ +K
Sbjct: 492 KKHFMFIGNGFLLAENNMNHINKLFKYVLFHSK 524
>Hs7661884 [A] KOG1804 RNA helicase
Length = 1942
Score = 82.8 bits (203), Expect = 5e-15
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 48/304 (15%)
Query: 1578 FDTIIIDEACQCTELSSIIPLRYGGK--RCIMVGDPNQLPPTVLSGAASDMKYNQSLFVR 1635
F I++DEA Q E +I+PL + R ++ GD QL P V S A + + SL R
Sbjct: 788 FTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 847
Query: 1636 MQKNCSP-----YLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGP 1690
+ ++ LL YR H AI + S FY+GKL + HK F P
Sbjct: 848 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGK------QPAHK--DFYP 899
Query: 1691 YKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYE---SKYDFTNRIGIISPYR 1747
FF G+ Q + ++ N E +E VE L + K D IG+++PY
Sbjct: 900 LTFF-TARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLD-DGSIGVVTPYA 957
Query: 1748 EQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRA--------------- 1792
+Q+ +R + R+ + S ++ + QG++ ++ +S VR
Sbjct: 958 DQVFRIRAELRK----KRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKE 1013
Query: 1793 ---DDNSTSV--GFLKDFRRMNVALTRAKCSLWILGHHKSLVN----NKLWKHLISDAKE 1843
+D++ + GFL +++ +N A+TRA+ + ++G +L + K W+ I+ E
Sbjct: 1014 QLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHE 1073
Query: 1844 RNCL 1847
+ L
Sbjct: 1074 NSSL 1077
>CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1106
Score = 82.8 bits (203), Expect = 5e-15
Identities = 97/357 (27%), Positives = 158/357 (44%), Gaps = 40/357 (11%)
Query: 1514 RDLRRLISEMGKQKDEIR-----ESNSLKYRNREQNRR--KAQARILAES-------DII 1559
R++++ I E QK + E+ + Y N +N+R K IL E+ DII
Sbjct: 670 REMKKAIVEQSTQKYHCKGILVGEAKRI-YENILKNQREHKPSQAILKEAFFALYAPDII 728
Query: 1560 CSTLSGSAHDVLASLGVK-FDTIIIDEACQCTELSSIIPL-RYGGKRCIMVGDPNQLPPT 1617
ST + S H++L + ++ I DEA Q E + I L ++ +VGD NQLP
Sbjct: 729 VST-ADSIHNLLENNVLRDVSNIQFDEASQVPEHTLISLLHKFPNASFGLVGDINQLPAY 787
Query: 1618 V---LSGAASDMKYNQSLFVRMQKNCSPY-LLDVQYRMHPAISKFPSLEFYKGKLQDGSS 1673
L G D +++ + P +L + YR HP +K S FY G+L G
Sbjct: 788 CDDDLQGLLKDYGIGKTMARASRDKMFPQSILRLVYRCHPTTTKILSDLFYNGQLISGV- 846
Query: 1674 VQEVNTRD--WHKKYPFGPYKFFDIVTGKQKQNTKTM--SYTNPEETKVAIELVENLLAT 1729
E N RD + P F I+ +++ M S N E + +V L
Sbjct: 847 --EKNQRDEFMRMRPDIWPNSSFPILVLNHEKDGYRMGTSVANNSEKDQVVRIVSLLTKK 904
Query: 1730 YESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISC 1789
+ + IGIIS Y+ Q + + ++ + + TID FQG E++++I+ C
Sbjct: 905 VKGYGLSESDIGIISFYKAQTSLLADALKK-------TDVKCGTIDAFQGTEREVMIVCC 957
Query: 1790 VRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNC 1846
N F+++ R+NVA++RA+ + I+G+ L K W + A+ C
Sbjct: 958 T----NKNPSLFMQEGTRVNVAMSRARQATIIIGNIAKLKKAKHWDTIAQSAQINKC 1010
>CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1553
Score = 79.0 bits (193), Expect = 7e-14
Identities = 86/334 (25%), Positives = 138/334 (40%), Gaps = 44/334 (13%)
Query: 1583 IDEACQCTELSSIIPLR-YGGKRCIMVGDPNQLPPTV---LSGAASDMKYNQSLFVRMQK 1638
IDEA Q E + + L+ + ++GD +QLPP L G D ++ +++
Sbjct: 1208 IDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTMERAIKE 1267
Query: 1639 NCSPYL-LDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKY------PFGPY 1691
P L YR HP ++ S FY G L G V E+ D+ K P P
Sbjct: 1268 KMFPVCTLRNVYRCHPKTTELLSELFYDGALVSG--VSELARSDFMTKRDDFWPNPKFPM 1325
Query: 1692 KFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQ 1751
F + K T T +N E + E+V+NL+ + + ++ IG+IS Y Q
Sbjct: 1326 MFVNNTGASTKMGTST---SNSSEKSIVGEIVQNLINDPRNPVNPSD-IGVISFYSAQTS 1381
Query: 1752 NMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVA 1811
+ R S + T+D FQG EK+III+ N F++ R+NVA
Sbjct: 1382 ILTEHLRG-------SGVKCGTVDAFQGSEKEIIIM----CSTNERISDFMQLSNRLNVA 1430
Query: 1812 LTRAKCSLWILGHHKSLVNNKLWKHLISDAKE---------------RNCLELACPGFLN 1856
++RAK I+GH L W +++ ++ RN + L+ ++
Sbjct: 1431 MSRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLIS 1490
Query: 1857 PSDRYAQDTIERFKGSHDYIANLDTYNPYDSFNS 1890
S + Q + H ++ + N Y S S
Sbjct: 1491 TSRQSKQQRANEYNSQHKHVKR-QSNNDYGSQRS 1523
>CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1551
Score = 79.0 bits (193), Expect = 7e-14
Identities = 86/334 (25%), Positives = 138/334 (40%), Gaps = 44/334 (13%)
Query: 1583 IDEACQCTELSSIIPLR-YGGKRCIMVGDPNQLPPTV---LSGAASDMKYNQSLFVRMQK 1638
IDEA Q E + + L+ + ++GD +QLPP L G D ++ +++
Sbjct: 1208 IDEASQLAECTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTMERAIKE 1267
Query: 1639 NCSPYL-LDVQYRMHPAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKY------PFGPY 1691
P L YR HP ++ S FY G L G V E+ D+ K P P
Sbjct: 1268 KMFPVCTLRNVYRCHPKTTELLSELFYDGALVSG--VSELARSDFMTKRDDFWPNPKFPM 1325
Query: 1692 KFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQ 1751
F + K T T +N E + E+V+NL+ + + ++ IG+IS Y Q
Sbjct: 1326 MFVNNTGASTKMGTST---SNSSEKSIVGEIVQNLINDPRNPVNPSD-IGVISFYSAQTS 1381
Query: 1752 NMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVA 1811
+ R S + T+D FQG EK+III+ N F++ R+NVA
Sbjct: 1382 ILTEHLRG-------SGVKCGTVDAFQGSEKEIIIM----CSTNERISDFMQLSNRLNVA 1430
Query: 1812 LTRAKCSLWILGHHKSLVNNKLWKHLISDAKE---------------RNCLELACPGFLN 1856
++RAK I+GH L W +++ ++ RN + L+ ++
Sbjct: 1431 MSRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNKVSLSSYPLIS 1490
Query: 1857 PSDRYAQDTIERFKGSHDYIANLDTYNPYDSFNS 1890
S + Q + H ++ + N Y S S
Sbjct: 1491 TSRQSKQQRANEYNSQHKHVKR-QSNNDYGSQRS 1523
>7302834 [A] KOG1804 RNA helicase
Length = 765
Score = 78.2 bits (191), Expect = 1e-13
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 42/321 (13%)
Query: 1549 QARILAESDIICSTLSGSAHDVLASLGVK--FDTIIIDEACQCTELSSIIPL----RYGG 1602
+A + + II +TL A V +LG F I IDEA TE ++I + +
Sbjct: 380 KASRIVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGIMGIKQTAD 439
Query: 1603 KRCIMVGDPNQLPPTVLSGAASDMKYNQSLFVRM-QKNC------------SPYLLDVQY 1649
I+ GD QL + S A+ + ++SL R+ Q +C L Y
Sbjct: 440 CHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNY 499
Query: 1650 RMHPAISKFPSLEFYKGKLQDGSSVQEVN-TRDW----HKKYPFGPYKFFDIVTGKQKQN 1704
R HP I + + +Y G+L+ + +VN +W + ++P F G +
Sbjct: 500 RSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWSVLTNPQFPI----IFQATHGVTNRE 555
Query: 1705 TKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQ 1764
+ S N E +V V+ L+ + +GI++PY Q + + Q
Sbjct: 556 QNSTSSYNNLEAEVICWYVKRLI---NDRVVGQEDVGIVAPYTAQGKLVTKLL------Q 606
Query: 1765 IRSY--IDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWIL 1822
+ Y ++ +++ +QG+EK III S V++ T++GF+ + RR+NV L+RAK L ++
Sbjct: 607 SKGYPNVEVGSVETYQGREKTIIIASLVKS---FTNMGFMCNPRRVNVLLSRAKALLILV 663
Query: 1823 GHHKSLVNNKLWKHLISDAKE 1843
G+ +L ++ +K +I++ K+
Sbjct: 664 GNPVTLRHHSDFKFVINECKK 684
>SPCC1739.03 [L] KOG1807 Helicases
Length = 1015
Score = 76.3 bits (186), Expect = 5e-13
Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 23/303 (7%)
Query: 1539 RNREQNRRKAQARILAESDIICSTLSG--SAHDVLASLGVKFDTIIIDEACQCTELSSII 1596
R R K A +L +++I T +G D+L + K I+EA E II
Sbjct: 666 RERIGFSNKRAAILLRGANVIGMTTTGLNKYRDILERINPKI--CFIEEAADVLE-GPII 722
Query: 1597 PLRYGG-KRCIMVGDPNQLPPTVLSGAASDMKYNQSL--FVRMQKNCSPYL-LDVQYRMH 1652
P + ++ +++GD QL P + A +N S+ F R+ +N Y L +Q RMH
Sbjct: 723 PAVFPSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFERLVENDMEYTRLTMQRRMH 782
Query: 1653 PAISKFPSLEFYKGKLQDGSSVQEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTN 1712
P I + S + + S E+ T+ W G + F + + + N S N
Sbjct: 783 PQIRRLVS------SVYEDLSDYEI-TKYWPSIPGMGEIRRFFLTHSRIEDNDGFASKIN 835
Query: 1713 PEETKVAIELVENLLATYESKYDFTNRIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFN 1772
E ++ ++ L+ +I ++ Y Q + + + +I
Sbjct: 836 LFEAQMLVQFAVYLINNGVEP----QKITCLTFYAAQKDLIERLLSESLNRE-KHFIKVA 890
Query: 1773 TIDGFQGQEKDIIIISCVRADDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLV-NN 1831
T+DG+QG+E D++++S VR +D T VGFL R+ V+L+RA+ L+I G+ + + +N
Sbjct: 891 TVDGYQGEENDVVLLSLVRNNDR-TEVGFLSSPHRVCVSLSRARRGLFIFGNAQLVAESN 949
Query: 1832 KLW 1834
LW
Sbjct: 950 PLW 952
>CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 602
Score = 67.8 bits (164), Expect = 2e-10
Identities = 74/287 (25%), Positives = 127/287 (43%), Gaps = 29/287 (10%)
Query: 1571 LASLGVKFDTIIIDEACQCT-----ELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASD 1625
LA + FD IDEA Q L++++P R I+VGD +QLPP ++
Sbjct: 308 LAEIKDLFDITFIDEASQLALYVLGSLATLLPKT----RIILVGDMHQLPPYTEDALPAE 363
Query: 1626 MKYNQ-----SLFVRMQKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDG-SSVQEVNT 1679
+K +L V+ ++ S +L V +R I+ FY L +V V
Sbjct: 364 LKRAAVGEPLTLAVKGRRWSSMHLTRV-HRCPKMITDLLGAVFYGNTLTSTRKAVNRVPI 422
Query: 1680 RDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNR 1739
+ + P+ F + ++ +Q S++N E + A++LV L + + + T
Sbjct: 423 LEAMELPSHHPFVFVNYIS---QQTQVGKSFSNENEARYALQLV-TALKRHAREQNTTVS 478
Query: 1740 IGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSV 1799
+ +++ Y Q Y + NTIDG QGQE D+ I+ R+D S
Sbjct: 479 VAVLNFYGAQYS--------YVYSIAEDGVRVNTIDGCQGQEYDVSIVLLTRSDPYEKS- 529
Query: 1800 GFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNC 1846
FL + R+NVAL+R+K + ++G + N+ + +R+C
Sbjct: 530 KFLVNPNRINVALSRSKMATVVIGQRHLIGNHPNVQQAKRGRYQRSC 576
>7292718 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 685
Score = 65.9 bits (159), Expect = 6e-10
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 1472 LNQKFQDALQKRKMLQAKLNKEDGNPNSSLS-SNEIADIQM--EIRDLRRLISEMGKQKD 1528
L +K K + AK + +P S L+ N+I +++ E++ L++L E G
Sbjct: 511 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETG---- 566
Query: 1529 EIRESNSLKYRNREQNRRKAQARILAESDIICSTLSGSAHDVLASLGVKFDTIIIDEACQ 1588
E+ ++ +YRN +R A+ ++L +D+IC T G+ L+ VKF +I+IDE+ Q
Sbjct: 567 ELSSADEKRYRNL---KRAAENQLLEAADVICCTCVGAGDGRLSR--VKFTSILIDESMQ 621
Query: 1589 CTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAAS 1624
TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 622 STEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 657
>CE01610 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 542
Score = 62.8 bits (151), Expect = 5e-09
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 35/261 (13%)
Query: 1577 KFDTIIIDEACQCT-----ELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASDMKYNQ- 1630
+FD IDEA Q L++++P R I+VGD +QLPP + +++K
Sbjct: 215 RFDITFIDEASQLALYVLGSLATMLPK----SRMILVGDMHQLPPYMEEALPAELKRAAI 270
Query: 1631 ----SLFVRMQKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDG----SSVQEVNTRDW 1682
+L V+ ++ S +L V +R I++ FY L + + +
Sbjct: 271 GEPLTLAVKGRRWPSMHLTRV-HRCPKMITEVLGDLFYGNTLTSSKPGVTDIPVLKAMGL 329
Query: 1683 HKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIGI 1742
++P V Q S++N E + A++LVE L Y S + I
Sbjct: 330 PSRHP------MVFVNYTSPQTAVGKSFSNEGEARYALQLVE-ALTRYASTANKKITAAI 382
Query: 1743 ISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNSTSVGFL 1802
++ Y Q Y + NTIDG QGQE D+ I+ R+D S FL
Sbjct: 383 LNFYGAQYS--------YVYSMAEDEVTVNTIDGCQGQEYDVTIVLLTRSDPYERS-KFL 433
Query: 1803 KDFRRMNVALTRAKCSLWILG 1823
+ R+NVAL+R K + I+G
Sbjct: 434 VNANRINVALSRPKIATVIIG 454
>7294354 [A] KOG1804 RNA helicase
Length = 2061
Score = 61.6 bits (148), Expect = 1e-08
Identities = 79/318 (24%), Positives = 125/318 (38%), Gaps = 78/318 (24%)
Query: 1558 IICSTLSGSAHDVLASLGVK---FDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQL 1614
I+ TLS S LA+LG+ F I +DEA Q E +I+PL + D ++
Sbjct: 930 IVVVTLSISME--LATLGLPKGLFTHIFLDEAAQAMECEAIMPLA-------LANDSTRI 980
Query: 1615 PPTVLSGAASDMKYNQSLFVRMQKNCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSV 1674
LL YR H AI +F S FY+ KL S
Sbjct: 981 ----------------------------ILLCENYRAHEAIIRFTSELFYEQKLV-ASGK 1011
Query: 1675 QEVNTRDWHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKY 1734
Q + R F P FF G+ Q+ + ++ N E +E V L + S +
Sbjct: 1012 QPRHDR-------FYPLTFF-TTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAW 1063
Query: 1735 DFTN--RIGIISPYREQMQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRA 1792
N IGI++PY +Q+ +R++ R+ + I + QG++ + +S VR
Sbjct: 1064 GKLNDTSIGIMTPYSDQVFRIRSELRK----RRMGGISVERVLNVQGKQFRAVFLSTVRT 1119
Query: 1793 -------------------DDNSTSVGFLKDFRRMNVALTRAKCSLWILGHHKSLVN--- 1830
D GFL + + +N A+TRA+ + ++G +L +
Sbjct: 1120 RRTCMPQGSAPGSASTTSIGDADADYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGR 1179
Query: 1831 -NKLWKHLISDAKERNCL 1847
K+W+ I E L
Sbjct: 1180 CRKVWERFIEICDEHKSL 1197
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,966,644
Number of Sequences: 60738
Number of extensions: 4798825
Number of successful extensions: 13757
Number of sequences better than 1.0e-05: 65
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 13365
Number of HSP's gapped (non-prelim): 172
length of query: 1997
length of database: 30,389,216
effective HSP length: 122
effective length of query: 1875
effective length of database: 22,979,180
effective search space: 43085962500
effective search space used: 43085962500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)