ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1418 good S KOG3319 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1418 508227 507616 -204
(204 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR038w [S] KOG3319 Predicted membrane protein 254 7e-68
YLR350w [S] KOG3319 Predicted membrane protein 214 5e-56
SPBC119.09c [S] KOG3319 Predicted membrane protein 151 7e-37
Hs20557519 [S] KOG3319 Predicted membrane protein 93 2e-19
Hs7661820 [S] KOG3319 Predicted membrane protein 90 2e-18
Hs7706009 [S] KOG3319 Predicted membrane protein 88 9e-18
At1g01230 [S] KOG3319 Predicted membrane protein 82 5e-16
7296472 [S] KOG3319 Predicted membrane protein 82 5e-16
At5g42000 [S] KOG3319 Predicted membrane protein 79 6e-15
ECU11g1150 [S] KOG3319 Predicted membrane protein 62 7e-10
>YGR038w [S] KOG3319 Predicted membrane protein
Length = 222
Score = 254 bits (648), Expect = 7e-68
Identities = 124/203 (61%), Positives = 141/203 (69%), Gaps = 2/203 (0%)
Query: 2 SQLKPFPSYGQDNSNGGASGIEPVKDHXXXXXXXXXXHVEPESFEDEXXXXXXXXXXXXX 61
+ LKPFPS G +S+ EPVKDH HVEPE+FEDE
Sbjct: 22 TDLKPFPSAGSASSS--IKTTEPVKDHRRRRSSSIISHVEPETFEDENDQQLLPNMNATW 79
Query: 62 XXXRGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDFNG 121
RGAWIIH+V+I LL+LF+NL PG++ EWSWTLTN+ YV+GSY+MFHLIKGTPFDFNG
Sbjct: 80 VDQRGAWIIHVVIIILLKLFYNLFPGVTTEWSWTLTNMTYVIGSYVMFHLIKGTPFDFNG 139
Query: 122 GVYDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXX 181
G YDNLTMWEQIDD LYTP+RKFLI+VPI LFL+STHY YDL+
Sbjct: 140 GAYDNLTMWEQIDDETLYTPSRKFLISVPIALFLVSTHYAHYDLKLFSWNCFLTTFGAVV 199
Query: 182 PKLPVTHRLRISIPGITGPAQIS 204
PKLPVTHRLRISIPGITG AQIS
Sbjct: 200 PKLPVTHRLRISIPGITGRAQIS 222
>YLR350w [S] KOG3319 Predicted membrane protein
Length = 216
Score = 214 bits (546), Expect = 5e-56
Identities = 110/204 (53%), Positives = 128/204 (61%), Gaps = 8/204 (3%)
Query: 1 MSQLKPFPSYGQDNSNGGASGIEPVKDHXXXXXXXXXXHVEPESFEDEXXXXXXXXXXXX 60
+S LKPFPS S PV DH HVE E+FEDE
Sbjct: 21 VSNLKPFPSQSNKIST-------PVTDHRRRRSSSVISHVEQETFEDENDQQMLPNMNAT 73
Query: 61 XXXXRGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDFN 120
RGAW+IH+VVI LLRLF++L G + +W+WTLTN+ Y++G YIMFHL+KGTPFDFN
Sbjct: 74 WVDQRGAWLIHIVVIVLLRLFYSLF-GSTPKWTWTLTNMTYIIGFYIMFHLVKGTPFDFN 132
Query: 121 GGVYDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXX 180
GG YDNLTMWEQI+D LYTPTRKFL+ VPI LFL+S Y R D+
Sbjct: 133 GGAYDNLTMWEQINDETLYTPTRKFLLIVPIVLFLISNQYYRNDMTLFLSNLAVTVLIGV 192
Query: 181 XPKLPVTHRLRISIPGITGPAQIS 204
PKL +THRLRISIPGITG AQIS
Sbjct: 193 VPKLGITHRLRISIPGITGRAQIS 216
>SPBC119.09c [S] KOG3319 Predicted membrane protein
Length = 186
Score = 151 bits (381), Expect = 7e-37
Identities = 69/128 (53%), Positives = 89/128 (68%), Gaps = 1/128 (0%)
Query: 65 RGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDFNGGVY 124
+GAW+IH+V+IA LRL F+ +P +S E +WTLTN+ Y+ GS+IMFH + GTPF+FNGG Y
Sbjct: 42 KGAWVIHIVLIAALRLIFHAIPSVSRELAWTLTNLTYMAGSFIMFHWVTGTPFEFNGGAY 101
Query: 125 DNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXXPKL 184
D LTMWEQ+D+G YTP RK+L+ +PI LFL+STHY Y+ PKL
Sbjct: 102 DRLTMWEQLDEGNQYTPARKYLLVLPIILFLMSTHYTHYN-GWMFLVNIWALFMVLIPKL 160
Query: 185 PVTHRLRI 192
P HR RI
Sbjct: 161 PAVHRKRI 168
>Hs20557519 [S] KOG3319 Predicted membrane protein
Length = 153
Score = 93.2 bits (230), Expect = 2e-19
Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 65 RGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDF-NGGV 123
RG W+ +++ I LL + +P +S WTLTN+ + +G YI H +KGTPF+ + G
Sbjct: 20 RGIWLSYVLAIGLLHIVLLSIPFVSVPVVWTLTNLIHNMGMYIFLHTVKGTPFETPDQGK 79
Query: 124 YDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXXPK 183
LT WEQ+D GV +T +RKFL PI L+ L++ Y +YD Q PK
Sbjct: 80 ARLLTHWEQMDYGVQFTASRKFLTITPIVLYFLTSFYTKYD-QIHFVLNTVSLMSVLIPK 138
Query: 184 LPVTHRLRI 192
LP H +RI
Sbjct: 139 LPQLHGVRI 147
>Hs7661820 [S] KOG3319 Predicted membrane protein
Length = 153
Score = 89.7 bits (221), Expect = 2e-18
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 65 RGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDF-NGGV 123
RG W+ +++++ LL + +P S WTLTN+ + + +Y+ H +KGTPF+ + G
Sbjct: 20 RGIWLAYIILVGLLHMVLLSIPFFSIPVVWTLTNVIHNLATYVFLHTVKGTPFETPDQGK 79
Query: 124 YDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXXPK 183
LT WEQ+D G+ +T +RKFL PI L+LL++ Y +YD PK
Sbjct: 80 ARLLTHWEQMDYGLQFTSSRKFLSISPIVLYLLASFYTKYD-AAHFLINTASLLSVLLPK 138
Query: 184 LPVTHRLRI 192
LP H +R+
Sbjct: 139 LPQFHGVRV 147
>Hs7706009 [S] KOG3319 Predicted membrane protein
Length = 153
Score = 87.8 bits (216), Expect = 9e-18
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 65 RGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDF-NGGV 123
RG W+ + + + LL + +P S +WTLTNI + +G Y+ H +KGTPF+ + G
Sbjct: 20 RGMWLTYALGVGLLHIVLLSIPFFSVPVAWTLTNIIHNLGMYVFLHAVKGTPFETPDQGK 79
Query: 124 YDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXXPK 183
LT WEQ+D GV +T +RKF PI L+ L++ Y +YD PK
Sbjct: 80 ARLLTHWEQLDYGVQFTSSRKFFTISPIILYFLASFYTKYD-PTHFILNTASLLSVLIPK 138
Query: 184 LPVTHRLRI 192
+P H +RI
Sbjct: 139 MPQLHGVRI 147
>At1g01230 [S] KOG3319 Predicted membrane protein
Length = 157
Score = 82.0 bits (201), Expect = 5e-16
Identities = 38/98 (38%), Positives = 60/98 (60%)
Query: 66 GAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDFNGGVYD 125
G W +++++ L + G S +WT+ N+A+ V +Y FH +KGTPF + G+Y+
Sbjct: 25 GVWTTYMLILFFGWLVVLSVSGCSPGMAWTVVNLAHFVVTYHSFHWMKGTPFADDQGIYN 84
Query: 126 NLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRY 163
LT WEQ+D+G T RKFL VP+ L+L+++H Y
Sbjct: 85 GLTWWEQMDNGQQLTRNRKFLTLVPVVLYLIASHTTDY 122
>7296472 [S] KOG3319 Predicted membrane protein
Length = 154
Score = 82.0 bits (201), Expect = 5e-16
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 65 RGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPF-DFNGGV 123
RG W+ +L+ + + L F +P +S W+WT TN+ + H+IKG P+
Sbjct: 21 RGFWLAYLLGLLSVHLLFLSVPFVSIPWAWTATNLLHNAAHLYFLHVIKGAPWLSTENDP 80
Query: 124 YDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXXPK 183
T WEQIDDGV T TRKFL VPI LFLL+ Y R + + PK
Sbjct: 81 SRRWTHWEQIDDGVQMTTTRKFLTAVPIVLFLLTCLYTRNNTE-HFIPNFISLVVVTLPK 139
Query: 184 LPVTHRLRI 192
LP H +R+
Sbjct: 140 LPQFHGVRL 148
>At5g42000 [S] KOG3319 Predicted membrane protein
Length = 154
Score = 78.6 bits (192), Expect = 6e-15
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 66 GAWIIHLVVI----ALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDFNG 121
G W +++++ L+ F+ PG++ WT+ ++A+ +Y FH KGTPF +
Sbjct: 22 GVWTTYILILFFSWLLVLSVFHCSPGIA----WTIVHLAHFTVTYHSFHWKKGTPFGDDQ 77
Query: 122 GVYDNLTMWEQIDDGVLYTPTRKFLITVPIGLFLLSTHYCRYDLQXXXXXXXXXXXXXXX 181
GVY+ LT WEQID+G T RKFL VP+ L+L+++H Y
Sbjct: 78 GVYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ-HPMLFLNTLAVFVMVV 136
Query: 182 PKLPVTHRLRISIPGITG 199
K P H++RI GI G
Sbjct: 137 AKFPHMHKVRIF--GING 152
>ECU11g1150 [S] KOG3319 Predicted membrane protein
Length = 147
Score = 61.6 bits (148), Expect = 7e-10
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 65 RGAWIIHLVVIALLRLFFNLLPGMSNEWSWTLTNIAYVVGSYIMFHLIKGTPFDFNGGVY 124
RG+WIIH++VI LL++ ++ +++ W L + Y + ++I FH+I G PF+ +Y
Sbjct: 21 RGSWIIHVLVILLLKMTLSM--AFNDDLGWQLALVIYNISTFIFFHMIPGDPFNDRYSLY 78
Query: 125 DNLTMWEQIDDGVLYTPTRKFLITVPIGLF 154
T WEQ+ + + TP F+ P+ F
Sbjct: 79 ---TFWEQLSEQLEGTPDLIFIALFPLIAF 105
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.323 0.143 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,981,096
Number of Sequences: 60738
Number of extensions: 388287
Number of successful extensions: 592
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 572
Number of HSP's gapped (non-prelim): 10
length of query: 204
length of database: 30,389,216
effective HSP length: 101
effective length of query: 103
effective length of database: 24,254,678
effective search space: 2498231834
effective search space used: 2498231834
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)