ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1437.1 good J KOG3401 Translation, ribosomal structure and biogenesis 60S ribosomal protein L26
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1437.1 516861 516565 -99
(99 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR344w [J] KOG3401 60S ribosomal protein L26 175 8e-45
YGR034w [J] KOG3401 60S ribosomal protein L26 175 8e-45
SPBC29B5.03c [J] KOG3401 60S ribosomal protein L26 140 3e-34
At3g49910 [J] KOG3401 60S ribosomal protein L26 120 4e-28
CE03278 [J] KOG3401 60S ribosomal protein L26 118 2e-27
Hs7705813 [J] KOG3401 60S ribosomal protein L26 117 3e-27
Hs4506621 [J] KOG3401 60S ribosomal protein L26 117 3e-27
7293850 [J] KOG3401 60S ribosomal protein L26 116 5e-27
At5g67510 [J] KOG3401 60S ribosomal protein L26 115 1e-26
Hs17446109 [J] KOG3401 60S ribosomal protein L26 107 4e-24
Hs22047775_2 [J] KOG3401 60S ribosomal protein L26 93 5e-20
Hs18565977_2 [J] KOG3401 60S ribosomal protein L26 93 5e-20
CE20731 [J] KOG3401 60S ribosomal protein L26 92 1e-19
Hs17462070 [J] KOG3401 60S ribosomal protein L26 87 3e-18
Hs17437402 [J] KOG3401 60S ribosomal protein L26 73 6e-14
ECU08g0370 [J] KOG3401 60S ribosomal protein L26 65 2e-11
Hs18558028 [J] KOG3401 60S ribosomal protein L26 64 5e-11
Hs22060064 [J] KOG3401 60S ribosomal protein L26 61 3e-10
Hs20539397 [J] KOG3401 60S ribosomal protein L26 58 2e-09
Hs20535772 [J] KOG3401 60S ribosomal protein L26 46 1e-05
Hs17441148 [J] KOG3401 60S ribosomal protein L26 44 4e-05
Hs22054453 [J] KOG3401 60S ribosomal protein L26 44 5e-05
Hs22041268 [J] KOG3401 60S ribosomal protein L26 43 6e-05
Hs17463655 [J] KOG3401 60S ribosomal protein L26 37 0.004
SPCC306.04c [BK] KOG1080 Histone H3 (Lys4) methyltransferase com... 31 0.25
YNL180c [R] KOG0393 Ras-related small GTPase Rho type 31 0.33
CE23997 [Z] KOG3595 Dyneins heavy chain 31 0.33
Hs22048001 [A] KOG3117 Protein involved in rRNA processing 28 1.6
At4g08350 [K] KOG1999 RNA polymerase II transcription elongation... 28 1.6
7298718 [C] KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isom... 28 1.6
At5g19950 [S] KOG3683 Uncharacterized conserved protein 28 2.8
Hs22050559 [J] KOG3401 60S ribosomal protein L26 27 3.7
CE15886_1 [O] KOG4295 Serine proteinase inhibitor (KU family) 27 3.7
YML081w [R] KOG1721 FOG: Zn-finger 27 4.8
ECU11g1930 [K] KOG1999 RNA polymerase II transcription elongatio... 27 4.8
CE11982 [O] KOG3696 Aspartyl beta-hydroxylase 27 4.8
At1g73960 [K] KOG1932 TATA binding protein associated factor 27 4.8
CE25068 [B] KOG0355 DNA topoisomerase type II 27 6.2
CE24863 [T] KOG3900 Transforming growth factor beta bone morphog... 27 6.2
At4g01070 [GC] KOG1192 UDP-glucuronosyl and UDP-glucosyl transfe... 26 8.2
>YLR344w [J] KOG3401 60S ribosomal protein L26
Length = 127
Score = 175 bits (444), Expect = 8e-45
Identities = 88/99 (88%), Positives = 95/99 (95%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKE 60
+LLSAPLSKELR QY IKALPIR++DEVLVVRGSKKGQEGK+SSVYRLKFAVQVDK+TKE
Sbjct: 29 VLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKE 88
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRKGGKLE 99
K NGASVP N+HPSK+VITKLHLDKDRKALIQRKGGKLE
Sbjct: 89 KVNGASVPINLHPSKLVITKLHLDKDRKALIQRKGGKLE 127
>YGR034w [J] KOG3401 60S ribosomal protein L26
Length = 129
Score = 175 bits (444), Expect = 8e-45
Identities = 88/99 (88%), Positives = 95/99 (95%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKE 60
+LLSAPLSKELR QY IKALPIR++DEVLVVRGSKKGQEGK+SSVYRLKFAVQVDK+TKE
Sbjct: 31 VLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLKFAVQVDKVTKE 90
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRKGGKLE 99
K NGASVP N+HPSK+VITKLHLDKDRKALIQRKGGKLE
Sbjct: 91 KVNGASVPINLHPSKLVITKLHLDKDRKALIQRKGGKLE 129
>SPBC29B5.03c [J] KOG3401 60S ribosomal protein L26
Length = 126
Score = 140 bits (353), Expect = 3e-34
Identities = 65/99 (65%), Positives = 86/99 (86%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKE 60
+L+SAPLSKELREQY I++LP+R++D++ V+RGS KG+EGK++SVYR KF + ++++T+E
Sbjct: 28 VLMSAPLSKELREQYKIRSLPVRRDDQITVIRGSNKGREGKITSVYRKKFLLLIERVTRE 87
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRKGGKLE 99
K+NGAS P I SKVVITKLHLDKDRK LI RKGGK+E
Sbjct: 88 KANGASAPVGIDASKVVITKLHLDKDRKDLIVRKGGKVE 126
>At3g49910 [J] KOG3401 60S ribosomal protein L26
Length = 146
Score = 120 bits (300), Expect = 4e-28
Identities = 53/94 (56%), Positives = 79/94 (83%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKE 60
+++S+PLS +LR++YN++++PIRK+DEV +VRG+ KG+EGKV VYR K+ + ++++T+E
Sbjct: 28 VIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITRE 87
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
K NG +V I PSKVVITKL LDKDRK+L++RK
Sbjct: 88 KVNGTTVNVGIQPSKVVITKLRLDKDRKSLLERK 121
>CE03278 [J] KOG3401 60S ribosomal protein L26
Length = 142
Score = 118 bits (295), Expect = 2e-27
Identities = 54/93 (58%), Positives = 75/93 (80%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEK 61
++SAPL+KELR ++ I+A+PIR +DEV+V+RG KG G+V YR KF + +DK+T+EK
Sbjct: 29 IMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGNTGRVLRCYRKKFVIHIDKITREK 88
Query: 62 SNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
+NG++V IHPSKV ITKL LDKDR+AL++RK
Sbjct: 89 ANGSTVHIGIHPSKVAITKLKLDKDRRALVERK 121
>Hs7705813 [J] KOG3401 60S ribosomal protein L26
Length = 145
Score = 117 bits (293), Expect = 3e-27
Identities = 54/94 (57%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKE 60
++S+PLSKELR++YN++++PIRK+DEV VVRG KGQ+ GKV VYR K+ + ++++ +E
Sbjct: 29 IMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQRE 88
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
K+NG +V IHPSKVVIT+L LDKDRK +++RK
Sbjct: 89 KANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
>Hs4506621 [J] KOG3401 60S ribosomal protein L26
Length = 145
Score = 117 bits (293), Expect = 3e-27
Identities = 54/94 (57%), Positives = 78/94 (82%), Gaps = 1/94 (1%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKE 60
++S+PLSKELR++YN++++PIRK+DEV VVRG KGQ+ GKV VYR K+ + ++++ +E
Sbjct: 29 IMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQRE 88
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
K+NG +V IHPSKVVIT+L LDKDRK +++RK
Sbjct: 89 KANGTTVHVGIHPSKVVITRLKLDKDRKKILERK 122
>7293850 [J] KOG3401 60S ribosomal protein L26
Length = 149
Score = 116 bits (291), Expect = 5e-27
Identities = 56/95 (58%), Positives = 76/95 (79%), Gaps = 1/95 (1%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKG-QEGKVSSVYRLKFAVQVDKLTKE 60
L+SAPLSKELR++YN++++PIR++DEV V+RG KG Q GKV YR KF V V+K+ +E
Sbjct: 29 LMSAPLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRE 88
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRKG 95
+NG +V IHPSKV+I KL LDKDRKA+++R+G
Sbjct: 89 NANGTNVYVGIHPSKVLIVKLKLDKDRKAILERRG 123
>At5g67510 [J] KOG3401 60S ribosomal protein L26
Length = 146
Score = 115 bits (287), Expect = 1e-26
Identities = 51/94 (54%), Positives = 79/94 (83%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKE 60
+L+S+PLSK+LR ++N++++PIRK+DEV VVRG+ KG+EGKV VYR K+ + ++++T+E
Sbjct: 28 VLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRGTFKGREGKVMQVYRRKWVIHIERITRE 87
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
K NG++V ++ S V+ITKL LDKDRK+L++RK
Sbjct: 88 KVNGSTVNVGVNASNVMITKLRLDKDRKSLLERK 121
>Hs17446109 [J] KOG3401 60S ribosomal protein L26
Length = 135
Score = 107 bits (266), Expect = 4e-24
Identities = 50/94 (53%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKE 60
++S+P+SKELR++YN++++PIRK+DEV VVRG KGQ+ GKV VYR K+ + ++ + +E
Sbjct: 29 IMSSPVSKELRQKYNVQSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIEWVQRE 88
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
K+NG +V T IHP KV IT+L LDKD K +++ K
Sbjct: 89 KTNGTTVHTGIHPRKVAITRLKLDKDSKKILEWK 122
>Hs22047775_2 [J] KOG3401 60S ribosomal protein L26
Length = 98
Score = 93.2 bits (230), Expect = 5e-20
Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 4 SAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKEKS 62
S+ L KELR++YN++++ IRK+DEV VV KGQ+ GKV VYR K+ + ++ +EK+
Sbjct: 4 SSSLCKELRQKYNVQSMTIRKDDEVQVVHRHYKGQQIGKVVQVYRKKYVTYIAQVQQEKA 63
Query: 63 NGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
NG +V IHPSKVV T+L LDKD K +++RK
Sbjct: 64 NGTTVHIGIHPSKVVSTRLKLDKDCKKILERK 95
>Hs18565977_2 [J] KOG3401 60S ribosomal protein L26
Length = 98
Score = 93.2 bits (230), Expect = 5e-20
Identities = 47/92 (51%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 4 SAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKEKS 62
S+ L KELR++YN++++ IRK+DEV VV KGQ+ GKV VYR K+ + ++ +EK+
Sbjct: 4 SSSLCKELRQKYNVQSMTIRKDDEVQVVHRHYKGQQIGKVVQVYRKKYVTYIAQVQQEKA 63
Query: 63 NGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
NG +V IHPSKVV T+L LDKD K +++RK
Sbjct: 64 NGTTVHIGIHPSKVVSTRLKLDKDCKKILERK 95
>CE20731 [J] KOG3401 60S ribosomal protein L26
Length = 106
Score = 92.0 bits (227), Expect = 1e-19
Identities = 41/75 (54%), Positives = 59/75 (78%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEK 61
++SAPL+KELR ++ I+A+PIR +DEV+V+RG KG G+V YR KF + +DK+T+EK
Sbjct: 29 IMSAPLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGNTGRVLRCYRKKFVIHIDKITREK 88
Query: 62 SNGASVPTNIHPSKV 76
+NG++V IHPSKV
Sbjct: 89 ANGSTVHIGIHPSKV 103
>Hs17462070 [J] KOG3401 60S ribosomal protein L26
Length = 140
Score = 87.4 bits (215), Expect = 3e-18
Identities = 42/94 (44%), Positives = 68/94 (71%), Gaps = 6/94 (6%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKE 60
++S+PLSKELR++YN+++ I+K+DEV V RG KGQ+ G++ VYR K+A+ ++++ E
Sbjct: 29 IMSSPLSKELRQKYNVRSKTIQKDDEVQVARGHCKGQQIGQIIQVYRKKYAIYIERVQWE 88
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
K+N +VP IHP+ +L LDK K +++RK
Sbjct: 89 KANSIAVPVGIHPA-----RLKLDKGHKKILERK 117
>Hs17437402 [J] KOG3401 60S ribosomal protein L26
Length = 101
Score = 73.2 bits (178), Expect = 6e-14
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 20 LPIRKEDEVLVVR--GSKKGQE-GKVSSVYRLKFAVQVDKLTKEKSNGASVPTNIHPSKV 76
+P RK++EV VVR G KGQ+ G V VYR K+ + ++ + +EK+NG +V IHPSK
Sbjct: 1 MPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTVHVGIHPSKA 60
Query: 77 VITKLHLDKDRKALIQRK 94
VIT+L LDKDRK + ++K
Sbjct: 61 VITRLKLDKDRKKIPEQK 78
>ECU08g0370 [J] KOG3401 60S ribosomal protein L26
Length = 143
Score = 65.1 bits (157), Expect = 2e-11
Identities = 33/91 (36%), Positives = 53/91 (57%)
Query: 4 SAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEKSN 63
SA LS+ELR++Y + P+R D V+V G G+EG +S + + V ++ K++
Sbjct: 32 SARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDGKEGVISKINYRDYKVYIEGCFVTKND 91
Query: 64 GASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
G + I+PSK+ ITK L+ RK ++RK
Sbjct: 92 GTNALVPIYPSKLTITKFFLENGRKEQLERK 122
>Hs18558028 [J] KOG3401 60S ribosomal protein L26
Length = 98
Score = 63.5 bits (153), Expect = 5e-11
Identities = 32/72 (44%), Positives = 49/72 (67%), Gaps = 1/72 (1%)
Query: 24 KEDEVLVVRGSKKGQE-GKVSSVYRLKFAVQVDKLTKEKSNGASVPTNIHPSKVVITKLH 82
++D+V V+G KGQ+ G V VYR K + + + ++K+NG +V IHPSKVVIT+L
Sbjct: 4 RKDDVQTVQGHCKGQQIGHVLKVYRKKDVIYTEWVQQQKANGTTVRVGIHPSKVVITRLK 63
Query: 83 LDKDRKALIQRK 94
+DKD K + ++K
Sbjct: 64 VDKDHKKIHEQK 75
>Hs22060064 [J] KOG3401 60S ribosomal protein L26
Length = 124
Score = 60.8 bits (146), Expect = 3e-10
Identities = 38/93 (40%), Positives = 51/93 (53%), Gaps = 33/93 (35%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEK 61
+LS+ LSKELR++YN++++PIRK+D V T
Sbjct: 57 ILSSLLSKELRDKYNVRSMPIRKDD---------------------------VQAFTP-- 87
Query: 62 SNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
+V T IHPSKVVIT+L LDKDRK L++RK
Sbjct: 88 ----TVHTGIHPSKVVITRLKLDKDRKMLLERK 116
>Hs20539397 [J] KOG3401 60S ribosomal protein L26
Length = 137
Score = 58.2 bits (139), Expect = 2e-09
Identities = 27/76 (35%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEK 61
++S+PLS+ELR++YN++++ + ++ + + + K Q GK VYR K+ ++ + +EK
Sbjct: 29 IMSSPLSEELRQKYNVRSMASERMMKLGLYQDTTK-QIGKAVLVYRKKYVTYIEWVQREK 87
Query: 62 SNGASVPTNIHPSKVV 77
+NG++V IHPSK++
Sbjct: 88 ANGSAVHGGIHPSKIL 103
>Hs20535772 [J] KOG3401 60S ribosomal protein L26
Length = 104
Score = 45.8 bits (107), Expect = 1e-05
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 35 KKGQEGKVSSVYRLKFAVQVDKLTKEKSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
+K +S R K+ VQ EK+NG +V IHP+KVVIT+L LDKD K +++++
Sbjct: 27 RKILSSSLSKELRQKYEVQW-----EKANGTTVHVGIHPNKVVITRLKLDKDCKKILEKE 81
>Hs17441148 [J] KOG3401 60S ribosomal protein L26
Length = 126
Score = 43.9 bits (102), Expect = 4e-05
Identities = 21/45 (46%), Positives = 37/45 (81%), Gaps = 1/45 (2%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQE-GKVSSV 45
++S+PLSKELR++ N++++ I+K+++V VV+G KGQ+ GK+ V
Sbjct: 82 IMSSPLSKELRQKRNVQSVFIQKDNKVQVVQGHYKGQQIGKIVQV 126
>Hs22054453 [J] KOG3401 60S ribosomal protein L26
Length = 462
Score = 43.5 bits (101), Expect = 5e-05
Identities = 19/57 (33%), Positives = 36/57 (62%)
Query: 38 QEGKVSSVYRLKFAVQVDKLTKEKSNGASVPTNIHPSKVVITKLHLDKDRKALIQRK 94
Q GKV +YR K+ + ++ + +EK++ +V + PSK +I++L L K+ K ++ K
Sbjct: 383 QIGKVVQIYREKYVIYIEWVQREKADDTTVRVDFRPSKGIISRLKLGKEHKKILAWK 439
>Hs22041268 [J] KOG3401 60S ribosomal protein L26
Length = 155
Score = 43.1 bits (100), Expect = 6e-05
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 49 KFAVQVDKLTKEKSNGASVPTNIHPSKVVITKLHLDKDRKALIQ 92
K+ + +++ EKSNG +V IHPS+ VI +L LD D K + Q
Sbjct: 84 KYVIYTERVQGEKSNGTTVHAGIHPSQAVIIRLTLDNDHKKIQQ 127
>Hs17463655 [J] KOG3401 60S ribosomal protein L26
Length = 132
Score = 37.4 bits (85), Expect = 0.004
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 49 KFAVQVDKLTKEKSNGASVPTNIHPSKVVITKLHLDKDRK 88
K+ + ++ + +EK+N +V I+ SKVV+T L LD+D K
Sbjct: 90 KYVIYIEWVQQEKANSTTVHVGIYSSKVVVTGLTLDEDHK 129
>SPCC306.04c [BK] KOG1080 Histone H3 (Lys4) methyltransferase complex subunit
SET1 and related methyltransferases
Length = 920
Score = 31.2 bits (69), Expect = 0.25
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 6 PLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLK 49
PL +L + YN A + E+L+ G ++ + GK+ S+ +K
Sbjct: 479 PLHYQLNQMYNSSASEAESDQELLLSSGDERVERGKIGSIKSVK 522
>YNL180c [R] KOG0393 Ras-related small GTPase Rho type
Length = 331
Score = 30.8 bits (68), Expect = 0.33
Identities = 18/67 (26%), Positives = 32/67 (46%), Gaps = 14/67 (20%)
Query: 22 IRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEKSNGASVPTNIHPSKVVITKL 81
+++E E L ++ +KKGQ+ K+ + KS G+ + +N H +K K
Sbjct: 272 LQQEKEALNIKPTKKGQKDKIHE--------------QSKSKGSKIASNNHHNKQAKPKT 317
Query: 82 HLDKDRK 88
DK +K
Sbjct: 318 RNDKKKK 324
>CE23997 [Z] KOG3595 Dyneins heavy chain
Length = 4568
Score = 30.8 bits (68), Expect = 0.33
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 18 KALPIRKEDEVLVVRGSKKGQEGKVSSV-----------YRLKFAVQVDKLTKEKSNGAS 66
K P+R E + L +KK QEGKV V Y+ ++A + + K + S
Sbjct: 3351 KVEPLRNELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKEEYAQLIGQAENIKQDLLS 3410
Query: 67 VPTNIHPSKVVITKLHLDKDR 87
V ++ S +++ L ++DR
Sbjct: 3411 VQEKVNRSTELLSSLRSERDR 3431
>Hs22048001 [A] KOG3117 Protein involved in rRNA processing
Length = 315
Score = 28.5 bits (62), Expect = 1.6
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 3 LSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEKS 62
LS+ + +EL+EQY+ IR V R S++ Q +++ + + V K K +
Sbjct: 201 LSSSVIRELKEQYSDAPEEIRDARHPHVTRQSQEDQH-RINYEESMMVRLSVSKREKGRR 259
Query: 63 NGASV-PTNIHP-------SKVVITKLHLDKDRKALIQRK 94
A+V + +H S + +HLD+D+ + +RK
Sbjct: 260 KRANVMSSQLHSLTHFSDISALTGGTVHLDEDQNPIKKRK 299
>At4g08350 [K] KOG1999 RNA polymerase II transcription elongation factor
DSIF/SUPT5H/SPT5
Length = 1054
Score = 28.5 bits (62), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 3 LSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYR 47
+ L K++ Q K + I +D+V V+ G KG++G V +Y+
Sbjct: 572 IKCKLEKKINVQDRYKNV-IAVKDDVRVIEGPSKGKQGPVKHIYK 615
Score = 26.6 bits (57), Expect = 6.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 17 IKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVD 55
++ +P RK D V +V G +G GK+ + V++D
Sbjct: 997 LEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKID 1035
>7298718 [C] KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific
2-hydroxy acid dehydrogenase superfamily)
Length = 598
Score = 28.5 bits (62), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLV 30
++++APL+ E RE++N KA + K V V
Sbjct: 211 LVVAAPLTNETREKFNGKAFNLMKRSSVFV 240
>At5g19950 [S] KOG3683 Uncharacterized conserved protein
Length = 463
Score = 27.7 bits (60), Expect = 2.8
Identities = 15/43 (34%), Positives = 24/43 (54%), Gaps = 6/43 (13%)
Query: 32 RGSKKGQEGKVSSVYRLKFAVQVDKLTKEKSNGASVPTNIHPS 74
RG +G+E + S+V+ L D+ K + G ++PT HPS
Sbjct: 356 RGRGRGREEEDSAVFTL------DEWEKRNTGGGALPTANHPS 392
>Hs22050559 [J] KOG3401 60S ribosomal protein L26
Length = 158
Score = 27.3 bits (59), Expect = 3.7
Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 4/35 (11%)
Query: 64 GASVPTNIHPSKVV----ITKLHLDKDRKALIQRK 94
GAS P P K + ITKL + KDRK ++++K
Sbjct: 101 GASPPPEWRPRKCLQQHFITKLKVAKDRKKILEQK 135
>CE15886_1 [O] KOG4295 Serine proteinase inhibitor (KU family)
Length = 788
Score = 27.3 bits (59), Expect = 3.7
Identities = 14/30 (46%), Positives = 16/30 (52%)
Query: 61 KSNGASVPTNIHPSKVVITKLHLDKDRKAL 90
+ N SV N HP V K HLD+ KAL
Sbjct: 392 QQNSPSVNENYHPELVNQFKSHLDEHEKAL 421
>YML081w [R] KOG1721 FOG: Zn-finger
Length = 1251
Score = 26.9 bits (58), Expect = 4.8
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 2 LLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEK 61
L SA +SKE + + + ++ ++G+K+ S+ K AVQ+ K KEK
Sbjct: 111 LHSALVSKESINSKDKTEIDAINDKNIIQIQGNKQTILPTPSNPLA-KTAVQLKKAAKEK 169
Query: 62 SNGASVPTNIHPS 74
NG ++ PS
Sbjct: 170 KNGKQGKLDLSPS 182
>ECU11g1930 [K] KOG1999 RNA polymerase II transcription elongation factor
DSIF/SUPT5H/SPT5
Length = 571
Score = 26.9 bits (58), Expect = 4.8
Identities = 24/71 (33%), Positives = 31/71 (42%), Gaps = 11/71 (15%)
Query: 6 PLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRL---------KFAVQVDK 56
P +EL E + +A PI D+V V RG G +G V S+ KF VQ
Sbjct: 250 PTFEELEEFH--QACPISVGDKVRVTRGELIGMKGVVRSISGTIAVVESRDGKFEVQSSG 307
Query: 57 LTKEKSNGASV 67
L K G +V
Sbjct: 308 LVKHFDLGETV 318
>CE11982 [O] KOG3696 Aspartyl beta-hydroxylase
Length = 872
Score = 26.9 bits (58), Expect = 4.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 55 DKLTKEKSNGASVPTNIHPSKVVITKLHLDKDRKALIQRKGGKLE 99
DK+ +EK++G P H + + HL + R+ R+GG E
Sbjct: 317 DKVVEEKNDGDDEPHVSHREAQRLRRQHLRESRRDNRPRQGGNRE 361
>At1g73960 [K] KOG1932 TATA binding protein associated factor
Length = 1273
Score = 26.9 bits (58), Expect = 4.8
Identities = 19/74 (25%), Positives = 35/74 (46%), Gaps = 1/74 (1%)
Query: 3 LSAPLSKELREQY-NIKALPIRKEDEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEK 61
L + E +++Y +++ L I KE E + K+ + + VY K ++ +K KEK
Sbjct: 1148 LDHSMENEAQQKYASLQTLSIGKEKEKKKDKEKKEKKRKREDPVYLEKKRLKKEKKRKEK 1207
Query: 62 SNGASVPTNIHPSK 75
V + P+K
Sbjct: 1208 EMAKLVSSTTDPAK 1221
>CE25068 [B] KOG0355 DNA topoisomerase type II
Length = 1114
Score = 26.6 bits (57), Expect = 6.2
Identities = 19/53 (35%), Positives = 30/53 (55%), Gaps = 8/53 (15%)
Query: 26 DEVLVVRGSKKGQEGKVSSVYRLKFAVQVDKLTKEKS---NGASVPTNIHPSK 75
DE+LV K ++ SS+ RL+ V +D+ T S NG+ +P IHP++
Sbjct: 33 DEILVNAADNKARD---SSMNRLE--VWLDRETARISVWNNGSGLPVEIHPTE 80
>CE24863 [T] KOG3900 Transforming growth factor beta bone morphogenetic
protein and related proteins
Length = 407
Score = 26.6 bits (57), Expect = 6.2
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 8 SKELREQYNIKALPIRKEDEVLVVR--GSKKGQEGKVSS 44
++ELRE YN ++P+ +D + R G K ++SS
Sbjct: 235 NEELREYYNYNSIPLDNDDREPIKRKNGKKNSLSEEISS 273
>At4g01070 [GC] KOG1192 UDP-glucuronosyl and UDP-glucosyl transferase
Length = 480
Score = 26.2 bits (56), Expect = 8.2
Identities = 15/41 (36%), Positives = 24/41 (57%), Gaps = 1/41 (2%)
Query: 1 MLLSAPLSKELREQYNIKALPIRKEDEVLVVRGSKKGQEGK 41
+LLS + LR + L +R+E+ VV+G +G+EGK
Sbjct: 394 VLLSEDIRAALRPRAGDDGL-VRREEVARVVKGLMEGEEGK 433
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.132 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,521,508
Number of Sequences: 60738
Number of extensions: 198667
Number of successful extensions: 451
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 409
Number of HSP's gapped (non-prelim): 46
length of query: 99
length of database: 30,389,216
effective HSP length: 75
effective length of query: 24
effective length of database: 25,833,866
effective search space: 620012784
effective search space used: 620012784
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)