ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII1442   suspect: LH   S     KOG4836  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII1442 519156  519857 234  
         (234 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YGR033c [S] KOG4836 Uncharacterized conserved protein                 256   2e-68
Hs7661810 [S] KOG4836 Uncharacterized conserved protein                50   2e-06

>YGR033c [S] KOG4836 Uncharacterized conserved protein
          Length = 239

 Score =  256 bits (653), Expect = 2e-68
 Identities = 116/177 (65%), Positives = 152/177 (85%), Gaps = 1/177 (0%)

Query: 59  PLWPRIRAFTTFTFSGILVIGATGLAGVVIYLIGAELFSPSGDTQIFNRAVSKVENDEVA 118
           PLWP++++ +TFTFSGILVIGA G++ +VIYLI +ELFSPSGDTQ+FNRAVS VE ++  
Sbjct: 63  PLWPQVKSASTFTFSGILVIGAVGISAIVIYLILSELFSPSGDTQLFNRAVSMVEKNKDI 122

Query: 119 RRLLKCNDTETSTERLKAYGEILTDDRWTRNRPISSTRRIDKEGKEHYLMRFHVESKQKM 178
           R LL+C+D  T  ERLKAYGE++T+D+WTRNRPI ST+++DKEG+ H+ MRFHVESK+K+
Sbjct: 123 RSLLQCDDGITGKERLKAYGELITNDKWTRNRPIVSTKKLDKEGRTHHYMRFHVESKKKI 182

Query: 179 GIVHVEAKESDVNYQPDFVSMYLDIPGEKRHYLIKPKL-SIVKPKGFLGVNWGPKRD 234
            +VH+EAKES  NYQPDF++MY+D+PGEKR+YLIKPKL  +   KGFLG+ WGP++D
Sbjct: 183 ALVHLEAKESKQNYQPDFINMYVDVPGEKRYYLIKPKLHPVSNSKGFLGIRWGPRKD 239


>Hs7661810 [S] KOG4836 Uncharacterized conserved protein
          Length = 248

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 37/140 (26%), Positives = 69/140 (48%), Gaps = 14/140 (10%)

Query: 75  ILVIGATGLAGVVIYLIGAELFSPSGDTQIFNRAVSKVENDEVARRLLKCNDTETSTERL 134
           I+V+    + G + Y I  ELFS S  ++I+ RA+ K  +      +          E +
Sbjct: 112 IVVLFGISITGGLFYTIFKELFSSSSPSKIYGRALEKCRSHPEVIGVFG--------ESV 163

Query: 135 KAYGEILTDDRWTRNRPISSTRRIDKEGKEHYLMRFHVESKQ--KMGIVHVEAKESDVNY 192
           K YGE+    R  R + +  T  + K+G +H  ++F++E  +  K G V+ + KE+  + 
Sbjct: 164 KGYGEVT---RRGRRQHVRFTEYV-KDGLKHTCVKFYIEGSEPGKQGTVYAQVKENPGSG 219

Query: 193 QPDFVSMYLDIPGEKRHYLI 212
           + DF  ++++I    R  +I
Sbjct: 220 EYDFRYIFVEIESYPRRTII 239


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.321    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,011,356
Number of Sequences: 60738
Number of extensions: 509019
Number of successful extensions: 1119
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1117
Number of HSP's gapped (non-prelim): 2
length of query: 234
length of database: 30,389,216
effective HSP length: 103
effective length of query: 131
effective length of database: 24,133,202
effective search space: 3161449462
effective search space used: 3161449462
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)