ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1592 check: MH A KOG1802 RNA processing and modification RNA helicase nonsense mRNA reducing factor (pNORF1)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1592 567908 570814 969
(969 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 1318 0.0
Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 876 0.0
SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing fac... 868 0.0
At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor... 860 0.0
CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 736 0.0
7292718 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 543 e-154
ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 400 e-111
YER176w [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 245 2e-64
SPCC737.07c [L] KOG1803 DNA helicase 221 4e-57
At2g03270 [L] KOG1803 DNA helicase 191 6e-48
Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effect... 189 2e-47
At5g35970 [L] KOG1803 DNA helicase 187 9e-47
At1g05460 [A] KOG1804 RNA helicase 186 2e-46
YKL017c [L] KOG1803 DNA helicase 182 2e-45
At2g19120 [A] KOG1801 tRNA-splicing endonuclease positive effect... 179 2e-44
SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effe... 178 3e-44
Hs21703358_3 [A] KOG1804 RNA helicase 176 2e-43
Hs14769950_3 [A] KOG1804 RNA helicase 176 2e-43
Hs14251207_2 [A] KOG1804 RNA helicase 173 1e-42
YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector... 172 2e-42
At4g30100 [A] KOG1801 tRNA-splicing endonuclease positive effect... 172 2e-42
Hs4504623 [L] KOG1803 DNA helicase 170 9e-42
SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive ef... 168 3e-41
At1g65810 [A] KOG1801 tRNA-splicing endonuclease positive effect... 164 8e-40
Hs14211540 [A] KOG1804 RNA helicase 162 2e-39
CE19303 [L] KOG1803 DNA helicase 162 3e-39
At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effect... 162 3e-39
At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effect... 160 1e-38
At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effect... 160 1e-38
7302834 [A] KOG1804 RNA helicase 159 2e-38
At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effect... 158 4e-38
At5g37160 [A] KOG1801 tRNA-splicing endonuclease positive effect... 156 2e-37
At5g37140 [A] KOG1801 tRNA-splicing endonuclease positive effect... 155 3e-37
Hs20470741 [L] KOG1805 DNA replication helicase 154 8e-37
At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effect... 152 2e-36
7303245 [A] KOG1804 RNA helicase 150 1e-35
SPBC16D10.04c [L] KOG1805 DNA replication helicase 148 4e-35
ECU05g1110 [L] KOG1803 DNA helicase 147 8e-35
At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effect... 145 2e-34
At1g08840 [L] KOG1805 DNA replication helicase 139 2e-32
7292369_2 [A] KOG1804 RNA helicase 135 2e-31
CE08664 [L] KOG1803 DNA helicase 132 3e-30
7301121 [L] KOG1807 Helicases 128 5e-29
CE23725 [L] KOG1805 DNA replication helicase 127 6e-29
CE02219 [L] KOG1805 DNA replication helicase 127 6e-29
7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector... 124 7e-28
Hs20162560 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 123 2e-27
YHR164c [L] KOG1805 DNA replication helicase 121 5e-27
SPCC1739.03 [L] KOG1807 Helicases 120 1e-26
Hs14786304_1 [L] KOG1807 Helicases 120 1e-26
CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector... 114 1e-24
CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector... 113 2e-24
CE24674 [L] KOG1806 DEAD box containing helicases 110 1e-23
CE06677 [L] KOG1807 Helicases 110 1e-23
At4g15570 [A] KOG1801 tRNA-splicing endonuclease positive effect... 103 1e-21
Hs14750549 [L] KOG1806 DEAD box containing helicases 100 2e-20
Hs7661884 [A] KOG1804 RNA helicase 99 2e-20
At2g38770 [L] KOG1806 DEAD box containing helicases 99 2e-20
7299528 [L] KOG1806 DEAD box containing helicases 99 2e-20
7291108 [L] KOG1805 DNA replication helicase 97 1e-19
CE18803 [L] KOG1803 DNA helicase 83 2e-15
CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector... 77 1e-13
ECU09g1800 [L] KOG1805 DNA replication helicase 69 3e-11
7294354 [A] KOG1804 RNA helicase 64 1e-09
CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector... 57 1e-07
>YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 971
Score = 1318 bits (3412), Expect = 0.0
Identities = 651/948 (68%), Positives = 759/948 (79%), Gaps = 11/948 (1%)
Query: 6 PNEPFDSDSDSNESVSLRXXXXXXXXXXXXEMLDEEYSEFHGTAANTDPIAEHACAYCGI 65
P + +S SD N + + L EE ++ T + ++++CAYCGI
Sbjct: 9 PYDISNSPSDVNVQPATQLNSTLVEDDDVDNQLFEE-AQVTETGFRSPSASDNSCAYCGI 67
Query: 66 DNTSCVVKCNICSKWFCNSKNGTNXXXXXXXXXXXXXXXXXXXPDSELGDTTLECYNCGR 125
D+ CV+KCN C KWFCN+KNGT+ PDS+LGDT LECYNCGR
Sbjct: 68 DSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVLSHHNVVSLHPDSDLGDTVLECYNCGR 127
Query: 126 TNVFVLGFVPAKSEAVVVLLCRLPCAKMKNVNWDTDNWQPLIEERKMLSWVAEEPSEEDQ 185
NVF+LGFV AKSEAVVVLLCR+PCA+ KN NWDTD WQPLIE+R++LSWVAE+P+EE++
Sbjct: 128 KNVFLLGFVSAKSEAVVVLLCRIPCAQTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEK 187
Query: 186 LKARMITPSQITKLEARWKSNKNATIMDIDMVEQDEDIPPTLMRYTDAYQYQRSFGPLIQ 245
LKAR+ITPSQI+KLEA+W+SNK+ATI DID E+ E IPP L+RY DAY+YQRS+GPLI+
Sbjct: 188 LKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEAIPPLLLRYQDAYEYQRSYGPLIK 247
Query: 246 LEADYDKQLKESQALEHISVTWDLALNNRHLATFALSTFESNELKVAVGDEMILKYSGPQ 305
LEADYDKQLKESQALEHISV+W LALNNRHLA+F LSTFESNELKVA+GDEMIL YSG Q
Sbjct: 248 LEADYDKQLKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSGMQ 307
Query: 306 HADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGTSYIRMQEALRK 365
H DW G+G+I++LPNSF+D FTLELKPS+ PPT+ TTGFTA F+W+GTSY RMQ+AL+K
Sbjct: 308 HPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKK 367
Query: 366 FAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQRPLSL 425
FA+ KKS+SG+LYYKILG +V D+ FDV LPK +P+F +LN SQSNAV HVLQRPLSL
Sbjct: 368 FAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSL 427
Query: 426 IQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSR 485
IQGPPGTGKTVTSATIVYHLSKIHK R+LVCAPSNVAVDHLAAKL +GLKVVRLTAKSR
Sbjct: 428 IQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSR 487
Query: 486 EDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKA 545
EDVESSVS LALHNLV R A S+SDT +FVKLVRK+EA I+ KA
Sbjct: 488 EDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTEAEILNKA 547
Query: 546 DVICCTCVGAGDKRLDYKFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVIL 605
DV+CCTCVGAGDKRLD KFRTVLIDESTQASEPECLIPIVKGAKQV+LVGDHQQLGPVIL
Sbjct: 548 DVVCCTCVGAGDKRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQLGPVIL 607
Query: 606 DRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRT 665
+RKA DAGLKQSLFERLISLGH+PIRLEVQYRMNP LSEFPSNMFYEGSLQNGVTIEQRT
Sbjct: 608 ERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRT 667
Query: 666 IARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIG 725
+ S FPWPI IPMMFWANYGREEIS NGTS+LNRIEAMNCE+IIT+LF+DGVKPEQIG
Sbjct: 668 VPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIG 727
Query: 726 VITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIG 785
VITPYEGQRAY++QYMQMNGS++K LY+ VEVASVDAFQGREKDYIILSCVRANE+ IG
Sbjct: 728 VITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIG 787
Query: 786 FLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTV 845
FL DPRRLNV LTRAKYGL+ILGNPR+L+RN+LW+HLL+HFREKGCLVEG LDNLQLCTV
Sbjct: 788 FLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTV 847
Query: 846 QLTKPSRAPRKAPSN-----NSSYTQYAGQRDFDTQSLVSFGGQ-NVVEKSFIPNTDLSS 899
QL +P + P N S + +DFD QS+VSF GQ +F+ NT+LSS
Sbjct: 848 QLVRPQPRKTERPMNAQFNVESEMGDFPKFQDFDAQSMVSFSGQIGDFGNAFVDNTELSS 907
Query: 900 LLNQQYWNGQSFDT----QSRLSATHPVNQYDKDAVNFDGSLSNGLRK 943
+N +YWN ++F + + + N Y ++A + + + + L++
Sbjct: 908 YINNEYWNFENFKSAFSQKQNRNEIDDRNLYQEEASHLNSNFARELQR 955
>Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1118
Score = 876 bits (2264), Expect = 0.0
Identities = 444/806 (55%), Positives = 567/806 (70%), Gaps = 7/806 (0%)
Query: 52 TDPIAEHACAYCGIDNTSCVVKCNICSKWFCNSKNGTNXXXXXXXXXXXXXXXXXXXPDS 111
T + HAC+YCGI + +CVV CN KWFCN + T+ D
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 112 ELGDTTLECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCAK---MKNVNWDTDNWQPLIE 168
LG+T LECYNCG NVF+LGF+PAK+++VVVLLCR PCA +K++NWD+ WQPLI+
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 169 ERKMLSWVAEEPSEEDQLKARMITPSQITKLEARWKSNKNATIMDIDMVEQDEDIPPTLM 228
+R LSW+ + PSE++QL+AR IT QI KLE WK N +AT+ D++ DE+ L+
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLL 294
Query: 229 RYTDAYQYQRSFGPLIQLEADYDKQLKESQALEHISVTWDLALNNRHLATFALSTFESNE 288
RY DAYQYQ FGPL++LEADYDK+LKESQ ++I+V WDL LN + +A F L +S +
Sbjct: 295 RYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDS-D 353
Query: 289 LKVAVGDEMILKYSGPQHADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAV 348
+++ GDE+ L+Y G W G G +I++P+++ DE +EL+ S P T F
Sbjct: 354 MRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAP-VEVTHNFQVD 412
Query: 349 FVWRGTSYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELN 408
FVW+ TS+ RMQ AL+ FAV + S+SG++Y+K+LG EV DV +LPK +LN
Sbjct: 413 FVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLN 472
Query: 409 QSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAA 468
SQ AVK VLQRPLSLIQGPPGTGKTVTSATIVYHL++ VLVCAPSN+AVD L
Sbjct: 473 HSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTE 532
Query: 469 KLHSMGLKVVRLTAKSREDVESSVSELALHNLV-SRSAXXXXXXXXXXXXXXXXXSSSDT 527
K+H GLKVVRL AKSRE ++S VS LALHN + + + SS+D
Sbjct: 533 KIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADE 592
Query: 528 TKFVKLVRKSEATIIQKADVICCTCVGAGDKRL-DYKFRTVLIDESTQASEPECLIPIVK 586
++ L R +E ++ ADVICCTCVGAGD RL +FR++LIDESTQA+EPEC++P+V
Sbjct: 593 KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVL 652
Query: 587 GAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFP 646
GAKQ++LVGDH QLGPV++ +KA AGL QSLFERL+ LG PIRL+VQYRM+P LS FP
Sbjct: 653 GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFP 712
Query: 647 SNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMN 706
SN+FYEGSLQNGVT R F WP PM F+ G+EEI+ +GTSYLNR EA N
Sbjct: 713 SNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAAN 772
Query: 707 CEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGR 766
EKI T+L K G KP+QIG+ITPYEGQR+Y+VQYMQ +GS+ LY VE+ASVDAFQGR
Sbjct: 773 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 832
Query: 767 EKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHF 826
EKD+IILSCVRANE IGFL+DPRRLNVALTRA+YG+II+GNP+ALS+ LW+HLL ++
Sbjct: 833 EKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYY 892
Query: 827 REKGCLVEGFLDNLQLCTVQLTKPSR 852
+E+ LVEG L+NL+ +Q +KP +
Sbjct: 893 KEQKVLVEGPLNNLRESLMQFSKPRK 918
>SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 925
Score = 868 bits (2243), Expect = 0.0
Identities = 453/886 (51%), Positives = 587/886 (66%), Gaps = 44/886 (4%)
Query: 37 MLDEEYSEFHGTAANTDPIAEHACAYCGIDNTSCVVKCNICSKWFCNSKNGTNXXXXXXX 96
+++++YSE H CAYC I N + ++KC C+KWFCN + +
Sbjct: 34 LVEKQYSEEH-------------CAYCHIKNPNSILKCLHCNKWFCNVRGKSGASHIISH 80
Query: 97 XXXXXXXXXXXXPDSELGDTTLECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCAKM--- 153
S L DT LECYNCG NVF+LGF+PAK++ VVVLLCR PCA+
Sbjct: 81 LVRARHKQVALHSHSSLSDTVLECYNCGTRNVFLLGFIPAKAKTVVVLLCRQPCARASIA 140
Query: 154 KNVNWDTDNWQPLIEERKMLSWVAEEPSEEDQLKARMITPSQITKLEARWKSNKNATIMD 213
K++NWD WQP+I +R+ L W+ PSEE+Q A IT Q+ +LE W+ + NA + D
Sbjct: 141 KDMNWDLTQWQPIISDRQFLPWLITPPSEEEQKLAIPITSQQMVRLEELWRKDPNANLED 200
Query: 214 IDMVEQDEDIPPTLMRYTDAYQYQRSFGPLIQLEADYDKQLKESQALEHISVTWDLALNN 273
+D +D+ +P +RY DA+ YQ PLIQ EADYDK+LKESQ + + V WD A+N
Sbjct: 201 LDKPIEDDSLPSVELRYKDAHAYQAVLSPLIQAEADYDKRLKESQTQKDVVVRWDQAINK 260
Query: 274 RHLATFALSTFESNELKVAVGDEMILKYSGPQHADWTGKGFIIQLPNSFKDEFTLELKPS 333
R+ A F L ES E+++A+GDEM L Y G A W+ G++I++PN+ DE LELK S
Sbjct: 261 RYTAWFLLPKLESGEIRLAIGDEMKLTYEGELRAPWSSTGYVIKIPNNVSDEVGLELKRS 320
Query: 334 QKTPPTNCTTGFTAVFVWRGTSYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDV 393
K P CT F+ +VW+ TS+ RMQ ALR FA LS FLY+K+LG ++P
Sbjct: 321 DKVP-IECTHNFSVDYVWKSTSFDRMQTALRLFATDGSRLSSFLYHKLLGHDIPPSFLKP 379
Query: 394 ELPKSIFVPHFTELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQR- 452
+LP + VP+ +LN SQS AV+ VL +PLSLIQGPPGTGKTVTSA++VYHL+ + ++
Sbjct: 380 KLPSDLSVPNLPKLNASQSEAVRAVLSKPLSLIQGPPGTGKTVTSASVVYHLATMQSRKR 439
Query: 453 -----VLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXX 507
VLVCAPSNVAVD LA K+H GL+VVR+ AKSRED+ESSVS L+LH +
Sbjct: 440 KSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYKFN 499
Query: 508 -XXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLD-YKFR 565
S D K LV +E +++ A VICCTCVGAGD+R+ YKFR
Sbjct: 500 PELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAGDRRISKYKFR 559
Query: 566 TVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL 625
+VLIDE+TQASEPEC+IP+V GAKQVVLVGDHQQLGPV++++K A L QSLFERLI L
Sbjct: 560 SVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIIL 619
Query: 626 GHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWAN 685
G+ P RL VQYRM+P LSEFPSN FYEG+LQNGVT +R FPW P+MF+AN
Sbjct: 620 GNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFYAN 679
Query: 686 YGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNG 745
+G+EE+S +GTS+LNR EA CEKI+T + V PEQIG++TPY+GQR+Y+VQYMQ NG
Sbjct: 680 FGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQNNG 739
Query: 746 SMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLI 805
SM+K LY VEVASVDAFQGREKD+IILSCVR++E IGF++DPRRLNVALTRAKYG+I
Sbjct: 740 SMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAKYGVI 799
Query: 806 ILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLTKPSRAPRKAPSNNSSYT 865
+LGNP+ L++++LW H +LH +EKG LVEG L++LQ ++ LT P + P+K
Sbjct: 800 VLGNPKVLAKHALWYHFVLHCKEKGYLVEGTLNSLQKFSLTLTPPQK-PQKF-------- 850
Query: 866 QYAGQRDFDTQSLVS----FGGQNVVEKSFIPNTDLSSLLNQQYWN 907
+RD + Q +S G + S +PN SS L + WN
Sbjct: 851 ----KRDLNVQRSLSPIQNAGSAMLPSFSNLPNLYSSSYLEE--WN 890
>At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1235
Score = 860 bits (2222), Expect = 0.0
Identities = 448/823 (54%), Positives = 563/823 (67%), Gaps = 17/823 (2%)
Query: 40 EEYSEFHGTAANTDPIAEHACAYCGIDNTSCVVKCNI--CSKWFCNSKNGTNXXXXXXXX 97
EE + G + EHAC YCGI N +CVV+CN+ C KWFCNS+ T+
Sbjct: 120 EETGDDDGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNSRGNTSGSHIVNHL 179
Query: 98 XXXXXXXXXXXPDSELGDTTLECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCAK---MK 154
DS LG+T LECYNCG NVF+LGF+ AK+++VVVLLCR PC +K
Sbjct: 180 VRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVLLCRDPCLNVNALK 239
Query: 155 NVNWDTDNWQPLIEERKMLSWVAEEPSEEDQLKARMITPSQITKLEARWKSNKNATIMDI 214
++NWD W PLI++R L W+ + PSE++QL+AR I+ QI K+E WK+N +AT+ D+
Sbjct: 240 DMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDATLEDL 299
Query: 215 DMVEQDEDIPPTLMRYTDAYQYQRSFGPLIQLEADYDKQLKESQALEHISVTWDLALNNR 274
+ D++ P +Y DAYQYQ F PLI+LEADYDK +KESQ+ E+++V WD+ LN +
Sbjct: 300 EKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKK 359
Query: 275 HLATFALSTFESNELKVAVGDEMILKYSGPQ-HADWTGKGFIIQLPNSFKDEFTLELKPS 333
+A F + NEL++ GDE+ L+YSG H W G ++ + ++E LEL+ +
Sbjct: 360 RVAYFVFP--KENELRLVPGDELRLRYSGDAVHPSWQSVGHVL----TAQEEVALELRAN 413
Query: 334 QKTPPTNCTTGFTAVFVWRGTSYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDV 393
Q P + GF+ FVW+ TS+ RMQ A++ FAV + S+SG++Y+++LG EV
Sbjct: 414 QGVP-IDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRN 472
Query: 394 ELPKSIFVPHFTELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRV 453
LP+ VP ELN SQ NAVK VLQ+P+SLIQGPPGTGKTVTSA IVYH++K + +V
Sbjct: 473 TLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 532
Query: 454 LVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSR---SAXXXXX 510
LVCAPSNVAVD LA K+ + GLKVVRL AKSRE V S V L LH V S
Sbjct: 533 LVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELH 592
Query: 511 XXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRL-DYKFRTVLI 569
SSSD K+ L R +E I Q ADVICCTCVGA D RL +++FR VLI
Sbjct: 593 KLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVLI 652
Query: 570 DESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIP 629
DESTQA+EPECLIP+V G KQVVLVGDH QLGPVI+ +KA AGL QSLFERL++LG P
Sbjct: 653 DESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKP 712
Query: 630 IRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGRE 689
IRL+VQYRM+P LSEFPSN FYEG+LQNGVTI +R FPWP+ PM F+ G+E
Sbjct: 713 IRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQE 772
Query: 690 EISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEK 749
EIS +GTSYLNR EA N EK++T K GV P QIGVITPYEGQRAY+V YM NGS+ +
Sbjct: 773 EISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQ 832
Query: 750 SLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGN 809
LY +EVASVD+FQGREKDYIILSCVR+NE IGFL+DPRRLNVALTRA+YG++ILGN
Sbjct: 833 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 892
Query: 810 PRALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLTKPSR 852
P+ LS+ LW+ LL H++E CLVEG L+NL+ VQ KP +
Sbjct: 893 PKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRK 935
>CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1069
Score = 736 bits (1901), Expect = 0.0
Identities = 377/814 (46%), Positives = 515/814 (62%), Gaps = 5/814 (0%)
Query: 55 IAEHACAYCGIDNTSCVVKCNICSKWFCNSKNGTNXXXXXXXXXXXXXXXXXXXPDSELG 114
+ EHAC YCGI + CV KC +C KWFCNS +GT+ DS G
Sbjct: 90 LPEHACRYCGISDPLCVAKCTVCRKWFCNSNDGTSGGHIVHHMVRSQHKEAYTHKDSPCG 149
Query: 115 DTTLECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCAKM---KNVNWDTDNWQPLIEERK 171
DT LECY CG NVF LGF+P K + VVV++CR PCA + + NW ++W+ +I E++
Sbjct: 150 DTQLECYRCGSKNVFNLGFIPGKKDQVVVIICRTPCASIAFQNDDNWSPEDWKSVIAEKQ 209
Query: 172 MLSWVAEEPSEEDQLKARMITPSQITKLEARWKSNKNATIMDIDMVEQDEDIPPTLMRYT 231
+LSW+ PSEE +AR IT +Q ++E W+ + AT+ D++ D + +RY
Sbjct: 210 LLSWIVNVPSEEQVARARKITATQAVRMEELWRDHPEATVDDLNKPGLDREPDHVQLRYV 269
Query: 232 DAYQYQRSFGPLIQLEADYDKQLKESQALEHISVTWDLALNNRHLATFALSTFESNELKV 291
DA+ Y + F PL+ +EA+YD+++KES + +V W+ L LA F L F +K+
Sbjct: 270 DAHHYSKVFRPLVAIEAEYDRRVKESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKL 329
Query: 292 AVGDEMILKYSGP-QHADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFV 350
A GDE+ LK+S ++WT G + ++P++ DE +E++ + FT V
Sbjct: 330 AKGDELRLKHSQTVDGSEWTKIGSVFKIPDNHGDEVGIEIRGAVDKSVMESRIMFTVDVV 389
Query: 351 WRGTSYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQS 410
W T++ R +AL K++S +LY K+LG ++ +LP+ + V ELN S
Sbjct: 390 WNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNSS 449
Query: 411 QSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKL 470
Q AVK VL RPLSLIQGPPGTGKTV SATIVYHL + + VLVC+PSN+AVDHLA K+
Sbjct: 450 QMQAVKQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKI 509
Query: 471 HSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKF 530
H GLKVVRL A+SRE E++V L L + + D ++
Sbjct: 510 HKTGLKVVRLCARSREHSETTVPYLTLQHQLKVMGGAELQKLIQLKDEAGELEFKDDLRY 569
Query: 531 VKLVRKSEATIIQKADVICCTCVGAGDKRLD-YKFRTVLIDESTQASEPECLIPIVKGAK 589
++L R E ++ ADVICCTC A D RL + RTVLIDESTQA+EPE L+ I++G +
Sbjct: 570 MQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIMRGVR 629
Query: 590 QVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNM 649
Q+VLVGDH QLGPV++ +KA AGL QSLFERL+ LG P RL+VQYRM+P LSEFPSN+
Sbjct: 630 QLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNV 689
Query: 650 FYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEK 709
FY+GSLQNGVT R + + WP P FW G EE+S +GTS+LNR EA N EK
Sbjct: 690 FYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEK 749
Query: 710 IITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKD 769
++++L K GV+P QIGVITPYEGQR+++V YM G++ LY VE+ASVDAFQGREKD
Sbjct: 750 LVSKLIKAGVQPHQIGVITPYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKD 809
Query: 770 YIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREK 829
YII++CVR+N+ IGFLSDPRRLNVA+TRAKYGL+++GN + L+R+ LW L+ H++ K
Sbjct: 810 YIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSK 869
Query: 830 GCLVEGFLDNLQLCTVQLTKPSRAPRKAPSNNSS 863
L EG ++ L+ + L K + + + N++
Sbjct: 870 EMLYEGPINALKPLNLALPKATIRTKNNIAGNAN 903
>7292718 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 685
Score = 543 bits (1400), Expect = e-154
Identities = 279/568 (49%), Positives = 372/568 (65%), Gaps = 11/568 (1%)
Query: 58 HACAYCGIDNTSCVVKCNICSKWFCNSKNGTNXXXXXXXXXXXXXXXXXXXPDSELGDTT 117
HAC YCGI + + VV CN C KWFCN + T+ + LG+T
Sbjct: 98 HACKYCGIHDPATVVMCNNCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETI 157
Query: 118 LECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCA---KMKNVNWDTDNWQPLIEERKMLS 174
LECY+CG NVFVLGF+PAK+++VVVLLCR PCA +K++NWD + W+PLI +R L+
Sbjct: 158 LECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLA 217
Query: 175 WVAEEPSEEDQLKARMITPSQITKLEARWKSNKNATIMDIDMVEQDEDIPPTLMRYTDAY 234
W+ ++PSE+ QL+AR I+ +QI KLE WK N AT D++ D + L+RY D Y
Sbjct: 218 WLVKQPSEQGQLRARQISAAQINKLEELWKENIEATFQDLEKPGIDSEPAHVLLRYEDGY 277
Query: 235 QYQRSFGPLIQLEADYDKQLKESQALEHISVTWDLALNNRHLATFALSTFESNELKVAVG 294
QY+++FGPL++LEA+YD++LKES E+I V WD+ LN + +A F L+ +S ++K+ G
Sbjct: 278 QYEKTFGPLVRLEAEYDQKLKESATQENIEVRWDVGLNKKTIAYFTLAKTDS-DMKLMHG 336
Query: 295 DEMILKYSGPQHADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGT 354
DE+ L Y G + W+ G +I++P++F D+ LELK S P CT+ FT F+W+ T
Sbjct: 337 DELRLHYVGELYNPWSEIGHVIKVPDNFGDDVGLELK-SSTNAPVKCTSNFTVDFIWKCT 395
Query: 355 SYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPD----VEFDVELPKSIFVPHFTELNQS 410
S+ RM AL KFA+ + S+S F+Y ++LG D V F PK PH +LN+S
Sbjct: 396 SFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNRS 455
Query: 411 QSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKL 470
Q AVKH LQRPLSLIQGPPGTGKTVTSATIVY L K+H VLVCAPSN AVD L K+
Sbjct: 456 QVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKI 515
Query: 471 HSMGLKVVRLTAKSREDVESSVSELALHNLV-SRSAXXXXXXXXXXXXXXXXXSSSDTTK 529
H LKVVR+ AKSRE ++S VS LALHN + + SS+D +
Sbjct: 516 HRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKR 575
Query: 530 FVKLVRKSEATIIQKADVICCTCVGAGDKRLD-YKFRTVLIDESTQASEPECLIPIVKGA 588
+ L R +E +++ ADVICCTCVGAGD RL KF ++LIDES Q++EPEC++P+V GA
Sbjct: 576 YRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGA 635
Query: 589 KQVVLVGDHQQLGPVILDRKAGDAGLKQ 616
KQ++LVGDH QLGPV++ +KA AGL Q
Sbjct: 636 KQLILVGDHCQLGPVVMCKKAARAGLSQ 663
>ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 782
Score = 400 bits (1027), Expect = e-111
Identities = 291/852 (34%), Positives = 425/852 (49%), Gaps = 149/852 (17%)
Query: 57 EHACAYCGIDNTSCVVKCNICSKWFCNSKNGTNXXXXXXXXXXXXXXXXXXXPDSELGDT 116
E C YC + +++C C K FCNS++ ++ D
Sbjct: 6 EMKCQYC--EAAELLIECITCGKCFCNSRSASSISHIVFHLVKAKHKSIRINGD------ 57
Query: 117 TLECYNCGRTNVFVLGFVPAKSEAVVVLLCRLPCAKMKNVNWDTDNWQPLIEERKMLSWV 176
++C CG N+F L K + C C+ K L+EER + +
Sbjct: 58 -IKCRKCGEDNLFKLLENGGK------IFCN-GCSSGKM----------LVEERCLT--I 97
Query: 177 AEEPSEEDQLKARMITPSQITKLEARWKSNKNATIMDIDMVEQDEDIPPTLMRYTDAYQY 236
+ P +++ R +T Q+ ++E R S +P R+ +A +Y
Sbjct: 98 VKSP----EVQGRRLTKQQMAEMEERNVS----------------PLPHVKPRF-EAKEY 136
Query: 237 QRSFGPLIQLEADYDKQLKESQALEHISVTWDLALNNRHLATFALSTFESNELKVAVGDE 296
F LI+ E ++++KES E++ V W+ F +S ELK+ VGDE
Sbjct: 137 VEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMKYCYFYFQNGDS-ELKINVGDE 191
Query: 297 MILKYSGPQHADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGTSY 356
+ L + + GF+ + F+ ELK +TP +G+T ++WRG Y
Sbjct: 192 IRLTHK----SGLVLHGFVSG------ETFSEELKVEIETPGDYPRSGYTVEYLWRGVCY 241
Query: 357 IRMQEALRKFAVT---------------------------------KKSLSGFLYYKILG 383
RM AL+K T KKS+ Y + G
Sbjct: 242 ERMVWALKKLYSTYKREVDRNKRNRNKDDGKKLEDKGIDEGKDPDKKKSM-----YGVEG 296
Query: 384 QEVPDVEFDVELPKSI--------------------FVPHFTELNQSQSNA-----VKHV 418
D V KS+ F F+ N + NA V+
Sbjct: 297 DVGVDRRKGVRAKKSLDEGPSIFEYILKGHKEGIGNFDHIFSSPNLPKLNASQEVAVRAA 356
Query: 419 LQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVV 478
L R ++LIQGPPGTGKT+ S+ IVY+L + + +VLV APSN AVD L K+H GL+V+
Sbjct: 357 LGRKVTLIQGPPGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVL 416
Query: 479 RLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSE 538
R+ ++ RE +S VS L+LH + S D+ ++ +
Sbjct: 417 RVMSRRREYGQSDVSFLSLHENLRE-------LQEGRKRKDEDHSRYDSIYNDEVNESLK 469
Query: 539 ATIIQKADVICCTCVGAGDKRLD-YKFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDH 597
++ +A+VI CTCV +G K + +KF VLIDE+ Q++EP LIP+V G K++VLVGDH
Sbjct: 470 KQLLNQAEVITCTCVTSGQKMFNRFKFHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDH 529
Query: 598 QQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQN 657
+QLGP IL +K AG KQSLFERLIS+G +P L VQYRM+ L E+PS MFY G L
Sbjct: 530 KQLGPTILCKKVAQAGFKQSLFERLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLT 589
Query: 658 GVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKD 717
G + R P++ F+ YGREE+S +GTS++N+ EA+ CE II LFK
Sbjct: 590 G----GKNFCRFDLGIPVN----FFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKC 641
Query: 718 GVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVR 777
GV QIGVITPYEGQR+Y++ ++ G+ +L E+++VD FQGREKD+II+S VR
Sbjct: 642 GVTESQIGVITPYEGQRSYILN--RIFGAEPGNL----EISNVDGFQGREKDFIIVSLVR 695
Query: 778 ANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEGFL 837
+N IGF+ D RR+NV LTRAK+GL+I+GNP L ++ +W +LL + KG ++EG L
Sbjct: 696 SNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGNPMTLMKHDMWGNLLSFYDRKGLVMEGPL 755
Query: 838 DNLQLCTVQLTK 849
NL+ ++ K
Sbjct: 756 HNLKRVIIKPPK 767
>YER176w [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1121
Score = 245 bits (626), Expect = 2e-64
Identities = 173/516 (33%), Positives = 267/516 (51%), Gaps = 69/516 (13%)
Query: 366 FAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQRPLSL 425
FA+T+ + F+ + + + ++ FD L S +LN+SQ AV+HVL +++
Sbjct: 613 FAMTRITNPKFIDLLLGQKPIKEIYFDNRLKFSS-----DKLNRSQKTAVEHVLNNSITI 667
Query: 426 IQGPPGTGKTVTSATIVYH-LSKIHKQRVLVCAPSNVAVDHLAAKL--HSMGLKVVRLTA 482
+QGPPGTGKT T I+ + + H +L A SN+A+D++A K+ + +K++R+ +
Sbjct: 668 LQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILS 727
Query: 483 KSREDVESS---VSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEA 539
K +E S + E+ LHN+V ++ S S+ TKF K +
Sbjct: 728 KKKEQQYSDDHPLGEICLHNIVYKNLSPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTN 787
Query: 540 TIIQKADVICCTCVGAGDKRLDY--KFRTVLIDESTQASEPECLIPI-VKGAKQVVLVGD 596
++ ++ +I T + AG + L + V++DE+TQ+SE L+P+ + G + V VGD
Sbjct: 788 KVVSQSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGD 847
Query: 597 HQQLGPVILDRKAGDAGLKQSLFERLISLGHI--PIRLEVQYRMNPQLSEFPSNMFYEGS 654
+QL + L+ SLFER++S G P+ L+ QYRM+P++SEFP Y G
Sbjct: 848 EKQLSSF-----SNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGE 902
Query: 655 LQNGVTIEQRTIARSTFPWPIHTIPMMFW-ANYGREEISGN------GTSYLNRIEAMNC 707
L++GVT EQ+ WP P+ F+ + G E + G +Y N+ E +
Sbjct: 903 LKDGVTDEQKA-------WPGVQHPLFFYQCDLGPESRVRSTQRDIVGFTYENKHECVEI 955
Query: 708 EKIITRLFKDGVKP-EQIGVITPYEGQRAYVVQYMQMN---------------------- 744
KII L D P E+IGVITPY QR + + N
Sbjct: 956 VKIIQILMLDKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNA 1015
Query: 745 -------GSMEK---SLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLN 794
GS++ ++ G+ VA+VD+FQG EK +II SCVR N N IGFL D RRLN
Sbjct: 1016 AGSQGTAGSLQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLN 1075
Query: 795 VALTRAKYGLIILGNPRALSR-NSLWSHLLLHFREK 829
VALTRAK+GLI++GN L + + LW + + E+
Sbjct: 1076 VALTRAKHGLIVVGNKNVLRKGDPLWKDYITYLEEQ 1111
>SPCC737.07c [L] KOG1803 DNA helicase
Length = 660
Score = 221 bits (563), Expect = 4e-57
Identities = 175/567 (30%), Positives = 287/567 (49%), Gaps = 57/567 (10%)
Query: 300 KYSGPQHADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGTSYIRM 359
K P D + +G + ++ + ++ LK + P + T + V + +Y RM
Sbjct: 109 KKKRPNETDISVEGVVTRV---HERHISVALKSEEDIPSS--VTRLSVVKLVNRVTYERM 163
Query: 360 QEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFT-ELNQSQSNAVKH- 417
+ + +F + L+Y ++G++ DV D +L I +F ELN SQ AVK
Sbjct: 164 RHTMLEFKRSIPEYRNSLFYTLIGRKKADVSIDQKLIGDI--KYFNKELNASQKKAVKFS 221
Query: 418 VLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKV 477
+ + LSLI GPPGTGKT T I+ L + +R+LVC SN+AVD++ +L S G+ +
Sbjct: 222 IAVKELSLIHGPPGTGKTHTLVEIIQQLV-LRNKRILVCGASNLAVDNIVDRLSSSGIPM 280
Query: 478 VRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTK-------- 529
VRL +R + S+ + +L +++SR+ S TK
Sbjct: 281 VRLGHPAR--LLPSILDHSL-DVLSRTGDNGDVIRGISEDIDVCLSKITKTKNGRERREI 337
Query: 530 ----------FVKLVRKSEATIIQKADVICCTCVGAGDKRLD-YKFRTVLIDESTQASEP 578
+ K K+ A I+ + V+ CT GAG ++L +F V+IDE++QA EP
Sbjct: 338 YKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGSRQLKGQRFDAVIIDEASQALEP 397
Query: 579 ECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLI-SLGH-IPIRLEVQY 636
+C IP++ G +V+L GDH QL P + ++ S+FERL+ S G + L +QY
Sbjct: 398 QCWIPLL-GMNKVILAGDHMQLSPNVQSKRP-----YISMFERLVKSQGDLVKCFLNIQY 451
Query: 637 RMNPQLSEFPSNMFYEGSLQNGVTIEQRTIA--RSTFPWPIHTIPMMFW---ANYGREEI 691
RM+ +S+FPS+ FY+ L +++R + + + P+ F+ NY ++
Sbjct: 452 RMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLGNYQEDDR 511
Query: 692 SGNGTSYL-----NRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGS 746
S + ++ N EA I+ L + G++ + I V+TPY Q A + Q ++ G
Sbjct: 512 SEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALIRQLLKEKG- 570
Query: 747 MEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLII 806
+ VE+ SVD QGREK+ II S VR+N+ +GFL++ RRLNVA+TR K L +
Sbjct: 571 ------IEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRHLCV 624
Query: 807 LGNPRALSRNSLWSHLLLHFREKGCLV 833
+G+ + S + H + F E+ +V
Sbjct: 625 IGDSNTVKWASEFFHQWVDFLEENAIV 651
>At2g03270 [L] KOG1803 DNA helicase
Length = 635
Score = 191 bits (484), Expect = 6e-48
Identities = 148/456 (32%), Positives = 227/456 (49%), Gaps = 34/456 (7%)
Query: 400 FVPHFTELNQSQSNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAP 458
F P L+QSQ +A+ L + + L+ GPPGTGKT T IV K ++L CA
Sbjct: 179 FTPFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVK-RGSKILACAA 237
Query: 459 SNVAVDHLAAKLHSMGLKVVRLTAKSR---EDVESSVSELALHNLVSRSAXXXXXXXXXX 515
SN+AVD++ +L +K+VR+ +R + ++S++ L S A
Sbjct: 238 SNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKAL 297
Query: 516 XXXXXXXSSSDTTKFV--------KLVRKSE----ATIIQKADVICCTCVGAGDKRLDYK 563
+T + + K RK + + +I+ ADVI T GA ++LD +
Sbjct: 298 NGKLLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNR 357
Query: 564 -FRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERL 622
F V+IDE QA E C I ++KG++ +L GDH QL P I +A GL ++LFERL
Sbjct: 358 TFDLVIIDEGAQALEVACWIALLKGSR-CILAGDHLQLPPTIQSAEAERKGLGRTLFERL 416
Query: 623 ISL--GHIPIRLEVQYRMNPQLSEFPSNMFYEG------SLQNGVTIEQRTIARSTFPWP 674
L I L VQYRM+ + + S Y+ S+ + + + + +S+
Sbjct: 417 ADLYGDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEA 476
Query: 675 IHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQR 734
T+ ++ A EE S N EA RL + GV+P IG+ITPY Q
Sbjct: 477 --TLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQ- 533
Query: 735 AYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLN 794
V+ + G EK M E+++VD FQGREK+ II+S VR+N + +GFL D RR+N
Sbjct: 534 --VMLLRILRGKEEKLKDM--EISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMN 589
Query: 795 VALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKG 830
VA+TR++ I+ + +S ++ ++ +F E G
Sbjct: 590 VAVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEEHG 625
>Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 828
Score = 189 bits (479), Expect = 2e-47
Identities = 158/548 (28%), Positives = 247/548 (44%), Gaps = 110/548 (20%)
Query: 401 VPHFTELNQSQSNAVKH----VLQRP----LSLIQGPPGTGKTVTSATIVYHL------- 445
+ + + N+ Q A++ V P + LI GPPGTGK+ T ++Y L
Sbjct: 79 IAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRK 138
Query: 446 --------SKIHKQRVLVCAPSNVAVDHLAAKL--------------------------- 470
+KI + RVLVCAPSN AVD L K+
Sbjct: 139 GHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLG 198
Query: 471 -------------------HSMGLKV---VRLTAKSREDVESSVSELALHNLVSRSAXXX 508
H M ++ V+ K +E ++ + EL+ + R
Sbjct: 199 PEKSINSEVLKFSLDSQVNHRMKKELPSHVQAMHKRKEFLDYQLDELSRQRALCRGGREI 258
Query: 509 XXXXXXXXXXXXXXSSSDTTKFVKLVR----KSEATIIQKADVICCTCVGAGDKRLDYKF 564
+ +K V+ K+++ II ++ +ICCT +G L+ F
Sbjct: 259 QRQELDENISKVSKERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLESAF 318
Query: 565 R--------TVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQ 616
R V++DE+ Q+ E E L P++ +++LVGD +QL P ++ KA + G Q
Sbjct: 319 RGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQ 378
Query: 617 SLFERLISL----------GHIPI-RLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRT 665
S+ R L +PI +L VQYRM+P + FPSN Y +L+ T Q
Sbjct: 379 SMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLK---TNRQTE 435
Query: 666 IARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKP---E 722
R + WP ++F G E + SY+N ++ + I +L KD K
Sbjct: 436 AIRCSSDWPFQPY-LVFDVGDGSERRDND--SYIN-VQEIKLVMEIIKLIKDKRKDVSFR 491
Query: 723 QIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANE-R 781
IG+IT Y+ Q+ + Q + E EV +VDAFQGR+KD +I++CVRAN +
Sbjct: 492 NIGIITHYKAQKTMI----QKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSIQ 547
Query: 782 NTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQ 841
+IGFL+ +RLNV +TRAKY L ILG+ R L N W+ L+ +++G +++ N +
Sbjct: 548 GSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKTCDKNYR 607
Query: 842 LCTVQLTK 849
V++ K
Sbjct: 608 HDAVKILK 615
>At5g35970 [L] KOG1803 DNA helicase
Length = 750
Score = 187 bits (474), Expect = 9e-47
Identities = 148/447 (33%), Positives = 224/447 (50%), Gaps = 48/447 (10%)
Query: 420 QRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVR 479
+RP+ ++QGPPGTGKT ++ L+ +RVLV AP+N AVD++ KL +GL +VR
Sbjct: 291 KRPVMIVQGPPGTGKTGMLKEVIT-LAVQQGERVLVTAPTNAAVDNMVEKLLHLGLNIVR 349
Query: 480 LTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFV-------- 531
+ +R + S+V+ +L +V+ V
Sbjct: 350 VGNPAR--ISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQL 407
Query: 532 -----KLVRKSEAT----IIQKADVICCTCVGAGD---KRLDYKFRTVLIDESTQASEPE 579
K ++K E I+ A V+ T +GA D +RL+ F V+IDE+ Q+ EP
Sbjct: 408 LKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLE-TFDLVVIDEAGQSIEPS 466
Query: 580 CLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL--GHIPIRLEVQYR 637
C IPI++G K+ +L GD QL PV+L RKA + GL SL ER SL G + +L QYR
Sbjct: 467 CWIPILQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYR 525
Query: 638 MNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTF---PWPIHTIPMMFWAN---YG---- 687
MN ++ + S Y G L++ ++ + S F W I P++ YG
Sbjct: 526 MNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATW-ITQCPLVLLDTRMPYGSLSV 584
Query: 688 ----REEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQM 743
R + +G G+ Y N EA + L GV P I V +PY Q + + +
Sbjct: 585 GCEERLDPAGTGSLY-NEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLD- 642
Query: 744 NGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYG 803
+ + GVEVA++D+FQGRE D +I+S VR+N +GFL D RR+NVA+TRA+
Sbjct: 643 ----DFPVADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKH 698
Query: 804 LIILGNPRALSRNSLWSHLLLHFREKG 830
+ ++ + + N+ + LL H R G
Sbjct: 699 VAVVCDSSTICHNTFLARLLRHIRYFG 725
>At1g05460 [A] KOG1804 RNA helicase
Length = 1002
Score = 186 bits (472), Expect = 2e-46
Identities = 150/446 (33%), Positives = 211/446 (46%), Gaps = 48/446 (10%)
Query: 400 FVPHFTELNQSQSNAVKHVLQ---RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQ-RVLV 455
FVP LN Q +++ VL P +I GPPGTGKT+T + L + RVLV
Sbjct: 390 FVPISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLV 449
Query: 456 CAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXX 515
CAPSN A DH+ KL + E V +E+ N +RS
Sbjct: 450 CAPSNSAADHILEKLLCL------------EGVRIKDNEIFRLNAATRSYEEIKPEIIRF 497
Query: 516 XXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYKFRTVLIDESTQA 575
K + + +T + A ++ V G F +L+DE+ QA
Sbjct: 498 CFFDELIFKCPPLKALTRYKLVVSTYMS-ASLLNAEGVNRGH------FTHILLDEAGQA 550
Query: 576 SEPECLIPIVK---GAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHI---- 628
SEPE +I + VVL GD +QLGPVI R A GL +S ERL +
Sbjct: 551 SEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGD 610
Query: 629 ---PIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWAN 685
+L YR +P++ + PS +FY+G L +A F P PM+F+
Sbjct: 611 ENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNF-LPNKEFPMVFYGI 669
Query: 686 YGREEISGNGTSYLNRIEAMNCEKIITRLF-KDGVKPEQIGVITPYEGQRAYVVQYMQMN 744
G +E GN S+ NRIE + I RL D V+ E IGVITPY Q M++
Sbjct: 670 QGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQ------VMKIK 723
Query: 745 GSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNT-------IGFLSDPRRLNVAL 797
+++ V+V SV+ FQG+EK II+S VR+ ++ +GFLS+PRR NVA+
Sbjct: 724 EVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAI 783
Query: 798 TRAKYGLIILGNPRALSRNSLWSHLL 823
TRA L+I+GNP + ++ W+ LL
Sbjct: 784 TRAISLLVIIGNPHIICKDMNWNKLL 809
>YKL017c [L] KOG1803 DNA helicase
Length = 683
Score = 182 bits (463), Expect = 2e-45
Identities = 154/543 (28%), Positives = 262/543 (47%), Gaps = 65/543 (11%)
Query: 325 EFTLELKPSQKTPPTNCTTGFTAVFVWRGTS---YIRMQEALRKFAVTKKSLSGFLYYKI 381
+ T+ L+ SQ T + ++ +++ + T+ Y RM+ +RK + + + +
Sbjct: 126 QITIALEESQDVIATTFYS-YSKLYILKTTNVVTYNRMESTMRKLSEISSPIQDKIIQYL 184
Query: 382 LGQE--VPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSA 439
+ + +P+ + KS P+ LN SQ A+ + L++I GPPGTGKT T
Sbjct: 185 VNERPFIPNTNSFQNI-KSFLNPN---LNDSQKTAINFAINNDLTIIHGPPGTGKTFTLI 240
Query: 440 TIVYHLS-KIHKQRVLVCAPSNVAVDHLAAKL-----HSMGLKVVRLTAKSREDVESSVS 493
++ L K ++R+L+C PSN++VD + +L +++ L++ + S+
Sbjct: 241 ELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGHPARLLDSNKRHSLD 300
Query: 494 ELALHNLVSRSAXXXXXXXXXXXXXXXXXSS-SDTTKFVKLVRK--------SEATIIQK 544
L+ N + + + +KL+RK + +I +
Sbjct: 301 ILSKKNTIVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKKREFKTIKDLIIQ 360
Query: 545 ADVICCTCVGAGDKRLDYKFR---------TVLIDESTQASEPECLIPIVKGAKQ---VV 592
+ ++ T G+ + L +R T++IDE +QA EP+C IP++ Q +V
Sbjct: 361 SRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLV 420
Query: 593 LVGDHQQLGPVIL--DRKAGDAGLKQSLFERLISLGHIPIR-----LEVQYRMNPQLSEF 645
L GD++QL P I D K L+ +LF+R+I + P R L VQYRMN ++ EF
Sbjct: 421 LAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKI--FPKRDMVKFLNVQYRMNQKIMEF 478
Query: 646 PSNMFYEGSLQNGVTIEQRTI-------ARSTFPWPIHTIPMMFWANYGRE------EIS 692
PS+ Y G L T+ R + A + IP++++ G E E +
Sbjct: 479 PSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGDEFQETADEAT 538
Query: 693 GNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLY 752
G+ Y N E ++ I L V IGVI+PY Q +++ + + ++
Sbjct: 539 ILGSKY-NEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIH-----DELKL 592
Query: 753 MGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRA 812
+E+++VD FQGREKD IILS VR+NE+ +GFL + RRLNVA+TR + L+++GN
Sbjct: 593 TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVGNIEV 652
Query: 813 LSR 815
L R
Sbjct: 653 LQR 655
>At2g19120 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1090
Score = 179 bits (453), Expect = 2e-44
Identities = 121/330 (36%), Positives = 180/330 (53%), Gaps = 14/330 (4%)
Query: 538 EATIIQKADVICCTCVGAGDK---RLDYKFRTVLIDESTQASEPECLIPIVKGAKQVVLV 594
EA+ +A+++ T +G K RL + F V+IDE+ QASE L P+ GA + VLV
Sbjct: 746 EASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAARCVLV 805
Query: 595 GDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGS 654
GD QQL ++ + AG +SLFER G + L VQYRM+PQ+ +FPS FY+G
Sbjct: 806 GDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGR 865
Query: 655 LQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRL 714
L++ +I + P+ + F ++GRE G SY N EA C + L
Sbjct: 866 LKDSESISSAP-DEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHL 924
Query: 715 FKD----GVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDY 770
K G +GVITPY+ Q + + ++ + + + +VDAFQG+E+D
Sbjct: 925 QKTLKSLGAGKVSVGVITPYKLQLKCLKH--EFGNALGQDELKEIYINTVDAFQGQERDV 982
Query: 771 IILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKG 830
II+SCVRA+ +GF+SD RR+NVALTRA+ L ++GN AL ++ W+ L+ R +
Sbjct: 983 IIMSCVRASGHG-VGFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAALISDARGRN 1041
Query: 831 CLVEGFLDNLQLCTVQLTKPSRAPRKAPSN 860
C +E +D+L L + K S AP+N
Sbjct: 1042 CFME--MDSLPL-DFPIPKVSSYNPMAPNN 1068
>SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1687
Score = 178 bits (452), Expect = 3e-44
Identities = 115/302 (38%), Positives = 171/302 (56%), Gaps = 20/302 (6%)
Query: 533 LVRKSEATIIQKADVICCTCVGAGDKRLDYK---FRTVLIDESTQASEPECLIPIVKGAK 589
L +K++ I+++ADV+C T G+G + + F TV+IDE+ QA E + +IP+ GAK
Sbjct: 1338 LRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRYGAK 1397
Query: 590 QVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLI-SLGHIPIRLEVQYRMNPQLSEFPSN 648
+ +LVGD QL P +L +KA QSLF R+ + + L +QYRM+P +S FPS
Sbjct: 1398 KCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPDISHFPSK 1457
Query: 649 MFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSY-LNRIEAM-N 706
FY+ L++G + ++T + P T +F G+E S ++Y L +E + N
Sbjct: 1458 KFYDSRLEDGDNMAEKT-QQVWHVNPKFTQYRLFDVR-GKERTSNTMSTYNLEEVEYLVN 1515
Query: 707 CEKIITRLFKDGVKPEQIGVITPYEGQ-----RAYVVQYMQMNGSMEKSLYMGVEVASVD 761
+ F D +IGVITPY Q RA+ V+Y KS +++ +VD
Sbjct: 1516 MVDELLNKFPDVNFTGRIGVITPYRSQLHELRRAFKVKY-------GKSFMSTIDIQTVD 1568
Query: 762 AFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSH 821
FQG+EKD I SCV++ ++ IGFL D RRLNVALTRA+ L+I+GN L + LW
Sbjct: 1569 GFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLLIIGNMETLKTDDLWGS 1628
Query: 822 LL 823
L+
Sbjct: 1629 LV 1630
Score = 51.6 bits (122), Expect = 6e-06
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 18/83 (21%)
Query: 406 ELNQSQSNAVKHVLQRP-LSLIQGPPGTGKTVTSATIV---------YHLSKIH------ 449
++N+ Q+ A+ L +LIQGPPGTGKT T I+ YH+++ +
Sbjct: 1129 QVNEPQAKAIMCALDNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKST 1188
Query: 450 --KQRVLVCAPSNVAVDHLAAKL 470
KQ++L+CAPSN AVD + +L
Sbjct: 1189 ESKQQILLCAPSNAAVDEVLLRL 1211
>Hs21703358_3 [A] KOG1804 RNA helicase
Length = 498
Score = 176 bits (445), Expect = 2e-43
Identities = 145/486 (29%), Positives = 230/486 (46%), Gaps = 81/486 (16%)
Query: 406 ELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRV------------ 453
+LN SQ+ AV+ L++P ++IQGPPGTGKT+ IV+ K ++++V
Sbjct: 1 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRL 60
Query: 454 -----LVCAPSNVAVDHLAAKL-HSMGLKVVRLTAKSREDVE------------------ 489
L C PSN +VD LA L M LK +R+ ++ E E
Sbjct: 61 GGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPRE 120
Query: 490 ----SSVSELALHNLVSRSA---XXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATII 542
S+ + LH+ + ++ S D + K++ ++ +
Sbjct: 121 GRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFEL 180
Query: 543 QKADVICCTCVGAGDKRLDY-KFRTVLIDESTQASEPECLIPIVK--GAKQVVLVGDHQQ 599
+ +VI CTC A L R +L+DE+ A+EPE LIP+V+ A++VVL+GDH+Q
Sbjct: 181 DRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQ 240
Query: 600 LGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQ--N 657
L PV+ + + + GL +SLFER H+ L+ QYRM+ + FPS FY+ L+
Sbjct: 241 LRPVVKNERLQNLGLDRSLFERYHEDAHM---LDTQYRMHEGICAFPSVAFYKSKLKTWQ 297
Query: 658 GVTIEQRTIARSTFPWPIHTIPMMFWANYGREEI------SGNGTSYLNRIEAMNCEKII 711
G+ + + + P++F G E GN S N E +I
Sbjct: 298 GLRRPPSVLGHA----GKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRIT 353
Query: 712 TRL-FKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDY 770
+L V+P+ I V+TPY Q + + + ++ G GV V+S+ QG E Y
Sbjct: 354 KQLTLGRTVEPQDIAVLTPYNAQASEISKALRREG------IAGVAVSSITKSQGSEWRY 407
Query: 771 IILSCVRA------NERNT-------IGFLSDPRRLNVALTRAKYGLIILGNPRALSRNS 817
+++S VR ++R T +GF+ DP ++NVA+TRA+ GL ++G+ L
Sbjct: 408 VLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCP 467
Query: 818 LWSHLL 823
LW LL
Sbjct: 468 LWRSLL 473
>Hs14769950_3 [A] KOG1804 RNA helicase
Length = 498
Score = 176 bits (445), Expect = 2e-43
Identities = 145/486 (29%), Positives = 230/486 (46%), Gaps = 81/486 (16%)
Query: 406 ELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRV------------ 453
+LN SQ+ AV+ L++P ++IQGPPGTGKT+ IV+ K ++++V
Sbjct: 1 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRL 60
Query: 454 -----LVCAPSNVAVDHLAAKL-HSMGLKVVRLTAKSREDVE------------------ 489
L C PSN +VD LA L M LK +R+ ++ E E
Sbjct: 61 GGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYSEQAEASEFPVPRVGSRKLLRKSPRE 120
Query: 490 ----SSVSELALHNLVSRSA---XXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATII 542
S+ + LH+ + ++ S D + K++ ++ +
Sbjct: 121 GRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFEL 180
Query: 543 QKADVICCTCVGAGDKRLDY-KFRTVLIDESTQASEPECLIPIVK--GAKQVVLVGDHQQ 599
+ +VI CTC A L R +L+DE+ A+EPE LIP+V+ A++VVL+GDH+Q
Sbjct: 181 DRHEVILCTCSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQ 240
Query: 600 LGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQ--N 657
L PV+ + + + GL +SLFER H+ L+ QYRM+ + FPS FY+ L+
Sbjct: 241 LRPVVKNERLQNLGLDRSLFERYHEDAHM---LDTQYRMHEGICAFPSVAFYKSKLKTWQ 297
Query: 658 GVTIEQRTIARSTFPWPIHTIPMMFWANYGREEI------SGNGTSYLNRIEAMNCEKII 711
G+ + + + P++F G E GN S N E +I
Sbjct: 298 GLRRPPSVLGHA----GKESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRIT 353
Query: 712 TRL-FKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDY 770
+L V+P+ I V+TPY Q + + + ++ G GV V+S+ QG E Y
Sbjct: 354 KQLTLGRTVEPQDIAVLTPYNAQASEISKALRREG------IAGVAVSSITKSQGSEWRY 407
Query: 771 IILSCVRA------NERNT-------IGFLSDPRRLNVALTRAKYGLIILGNPRALSRNS 817
+++S VR ++R T +GF+ DP ++NVA+TRA+ GL ++G+ L
Sbjct: 408 VLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCP 467
Query: 818 LWSHLL 823
LW LL
Sbjct: 468 LWRSLL 473
>Hs14251207_2 [A] KOG1804 RNA helicase
Length = 776
Score = 173 bits (438), Expect = 1e-42
Identities = 171/522 (32%), Positives = 234/522 (44%), Gaps = 104/522 (19%)
Query: 385 EVPDVEFDVELPKSIFVPHFTE-LNQSQSNAVKHVLQ---RPLSLIQ-GPPGTGKTVT-- 437
E+ D +++ PK+ + F LN++Q AVK +L RPL I GPPGTGKTVT
Sbjct: 287 EMSDWVDEIQTPKARKMEFFNPVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTII 346
Query: 438 SATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELAL 497
A + H + + R+LVCAPSN A D + +LH KV++ R + E+ +
Sbjct: 347 EAVLQVHFA-LPDSRILVCAPSNSAADLVCLRLHES--KVLQPATMVRVNATCRFEEIVI 403
Query: 498 HNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKAD---VICCTCVG 554
D K R E I KA +I TC
Sbjct: 404 ----------------------------DAVK--PYCRDGED--IWKASRFRIIITTCSS 431
Query: 555 AGDKRLDYK-------FRTVLIDESTQASEPECLIPI-----VKGAKQVVLVGDHQQLGP 602
+G L Y+ F V +DE+ QASEPECLIP+ + G Q+VL GD QLGP
Sbjct: 432 SG---LFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISG--QIVLAGDPMQLGP 486
Query: 603 VILDRKAGDAGLKQSLFERLISL--------------GHIPI---RLEVQYRMNPQLSEF 645
VI R A GL S ERL+S H P+ +L YR + L
Sbjct: 487 VIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRSHEALLML 546
Query: 646 PSNMFYEGSLQNGVTIEQRTIARSTFPW---PIHTIPMMFWANYGREEISGNGTSYLNRI 702
PS +FY L+ T+ S W P P++F G E G S+ N
Sbjct: 547 PSRLFYHRELE---VCADPTVVTSLLGWEKLPKKGFPLIFHGVRGSEAREGKSPSWFNPA 603
Query: 703 EAMNCEK---IITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVAS 759
EA+ + ++ V IGVITPY Q ++ + N + M ++V S
Sbjct: 604 EAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQ-VEKIRILLRNVDL-----MDIKVGS 657
Query: 760 VDAFQGREKDYIILSCVRANE------RNTIGFLSDPRRLNVALTRAKYGLIILGNPRAL 813
V+ FQG+E II+S VR+NE R +GFLS+ +R NVA+TR K LI+LGNP L
Sbjct: 658 VEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLIVLGNPHVL 717
Query: 814 SRNSLWSHLLLHFREK----GCLVEGFLDNLQLCTVQLTKPS 851
R+ + LL + GC + L +LQ C + PS
Sbjct: 718 VRDPCFGALLEYSITNGVYMGCDLPPALQSLQNCGEGVADPS 759
>YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 2231
Score = 172 bits (437), Expect = 2e-42
Identities = 115/324 (35%), Positives = 182/324 (55%), Gaps = 33/324 (10%)
Query: 535 RKSEATIIQKADVICCTCVGAGDKRL---DYKFRTVLIDESTQASEPECLIPIVKGAKQV 591
R ++A I+ +D+IC T G+ L KF TV+IDE+ Q +E +IP+ G K+
Sbjct: 1552 RNAQAHILAVSDIICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRC 1611
Query: 592 VLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFY 651
++VGD QL P +L A + QSLF R+ P L+VQYRM+P +S+FPS+ FY
Sbjct: 1612 IMVGDPNQLPPTVLSGAASNFKYNQSLFVRM-EKNSSPYLLDVQYRMHPSISKFPSSEFY 1670
Query: 652 EGSLQNGVTIEQRTIARSTFPWPIHTIPMM-----FWANYGREEISGNGTSYLNRIEAMN 706
+G L++G ++ + PW H + + F GR+E + SY N E
Sbjct: 1671 QGRLKDGPGMD----ILNKRPW--HQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRV 1724
Query: 707 CEKIITRLFKDGVKP----EQIGVITPYEGQ----RAYVVQYMQMNGSMEKSLYMGVEVA 758
+++ LF+ +IG+I+PY Q R +Y G + KS ++
Sbjct: 1725 AIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYF--GGMINKS----IDFN 1778
Query: 759 SVDAFQGREKDYIILSCVRANE-RNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNS 817
++D FQG+EK+ I++SCVRA++ ++++GFL D RR+NVALTRAK + +LG+ R+L+++
Sbjct: 1779 TIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSK 1838
Query: 818 LWSHLLLHFREKGCLV---EGFLD 838
LW L+ +++ CL GFLD
Sbjct: 1839 LWRDLIEDAKDRSCLAYACSGFLD 1862
Score = 63.2 bits (152), Expect = 2e-09
Identities = 55/170 (32%), Positives = 80/170 (46%), Gaps = 41/170 (24%)
Query: 372 SLSGFLYYKILGQEV---PDVEFDVELPKSIFVPHFTELNQSQSNA-VKHVLQRPLSLIQ 427
+L G YY ++GQ + P +V+ + V +LN SQ+ A V V + SLIQ
Sbjct: 1297 TLEGLEYYDLVGQILQAKPSPPVNVDAAEIETVKKSYKLNTSQAEAIVNSVSKEGFSLIQ 1356
Query: 428 GPPGTGKTVTSATIV-YHLSK-----------------------IHKQRVLVCAPSNVAV 463
GPPGTGKT T I+ Y LS + KQ++L+CAPSN AV
Sbjct: 1357 GPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNSSNTEQLLKKQKILICAPSNAAV 1416
Query: 464 DHLAAKL---------HSMGLKVVRLTAKSREDVES-SVSELALHNLVSR 503
D + +L H ++VR+ R DV + ++ +L L LV +
Sbjct: 1417 DEICLRLKSGVYDKQGHQFKPQLVRV---GRSDVVNVAIKDLTLEELVDK 1463
>At4g30100 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1311
Score = 172 bits (437), Expect = 2e-42
Identities = 114/310 (36%), Positives = 171/310 (54%), Gaps = 23/310 (7%)
Query: 538 EATIIQKADVICCTCVGAGDK---RLDYKFRTVLIDESTQASEPECLIPIVKGAKQVVLV 594
EA+ +A+++ T +G K RL + F V+IDE+ QASE L P+ GA + VLV
Sbjct: 909 EASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAARCVLV 968
Query: 595 GDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGS 654
GD QQL ++ + AG +SLFER G + L VQYRM+PQ+ +FPS FY+G
Sbjct: 969 GDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGR 1028
Query: 655 LQNGVTIEQRTIARSTFPWPIH-----TIPMMFW-ANYGREEISGNGTSYLNRIEAMNCE 708
L + ++ ST P I+ P +F+ ++GRE G SY N EA C
Sbjct: 1029 LTDSESV-------STAPDEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCV 1081
Query: 709 KIITRLFKD----GVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQ 764
+ L + G +GVITPY+ Q + ++ ++ + + + +VDAFQ
Sbjct: 1082 GVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCL--KIEFGNALSQDELQEIYINTVDAFQ 1139
Query: 765 GREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLL 824
G+E+D II+SCVRA+ +GF++D RR+NVALTRAK L ++GN AL + W+ L+
Sbjct: 1140 GQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALIT 1198
Query: 825 HFREKGCLVE 834
+ + C +E
Sbjct: 1199 DAKARNCFME 1208
>Hs4504623 [L] KOG1803 DNA helicase
Length = 993
Score = 170 bits (431), Expect = 9e-42
Identities = 151/512 (29%), Positives = 247/512 (47%), Gaps = 57/512 (11%)
Query: 355 SYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNA 414
+Y R+++AL + L + G+ P ++ P + F T L+ SQ A
Sbjct: 144 TYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPASEIH-PLTFFN---TCLDTSQKEA 199
Query: 415 VKHVL-QRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSM 473
V L Q+ L++I GPPGTGKT T I+ K +VL CAPSN+AVD+L +L
Sbjct: 200 VSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK-QGLKVLCCAPSNIAVDNLVERLALC 258
Query: 474 GLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTT----- 528
+++RL +R + SV + +L +++RS + T
Sbjct: 259 KQRILRLGHPAR--LLESVQQHSLDAVLARSDSAQNVADIRKDIDQVFVKNKKTQDKREK 316
Query: 529 ----KFVKLVRKS-----EATIIQK---ADVICCTCVGA---GDKRL--DYKFRTVLIDE 571
+KL+RK EA +++ A+V+ T GA G +L + F V+IDE
Sbjct: 317 SNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDE 376
Query: 572 STQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLIS-LGHIPI 630
QA E C IP++K A++ +L GDH+QL P + KA AGL SL ERL G +
Sbjct: 377 CAQALEASCWIPLLK-ARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVV 435
Query: 631 R-LEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHT----IPMMFWAN 685
R L VQYRM+ + + S+ Y G + ++ + + P T +P++
Sbjct: 436 RTLTVQYRMHQAIMRWASDTMYLGQVTAHSSVARHLLR--DLPGVAATEETGVPLLLVDT 493
Query: 686 YG-------REEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVV 738
G E+ G R+ +++ + ++ GV I V++PY Q +
Sbjct: 494 AGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDA----GVPARDIAVVSPYNLQVDLLR 549
Query: 739 QYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALT 798
Q + + +E+ SVD FQGREK+ +ILS VR+N + +GFL++ RR+NVA+T
Sbjct: 550 QSLVHR-------HPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVT 602
Query: 799 RAKYGLIILGNPRALSRNSLWSHLLLHFREKG 830
RA+ + ++ + R ++ ++ L+ +F + G
Sbjct: 603 RARRHVAVICDSRTVNNHAFLKTLVEYFTQHG 634
>SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1944
Score = 168 bits (426), Expect = 3e-41
Identities = 112/310 (36%), Positives = 170/310 (54%), Gaps = 22/310 (7%)
Query: 533 LVRKSEATIIQKADVICCTCVGAGDKRL---DYKFRTVLIDESTQASEPECLIPIVKGAK 589
L ++ + ++Q+AD++C T +G + L FRTV+IDE+ QA E +IP+ G +
Sbjct: 1476 LKKQIQNQLLQEADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGCE 1535
Query: 590 QVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL-GHIPIRLEVQYRMNPQLSEFPSN 648
V+VGD QL P +L + + G QSL+ R+ L +QYRMNP++S FPS
Sbjct: 1536 SCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPSK 1595
Query: 649 MFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMM----FWANYGREEISGNGTSYLNRIEA 704
FY L +G + A ++ PW H P + F+ +G E S N S N EA
Sbjct: 1596 FFYNSKLLDGPNMS----AVTSRPW--HEDPQLGIYRFFNVHGTEAFS-NSKSLYNVEEA 1648
Query: 705 MNCEKIITRLFKDGVKPE---QIGVITPYEGQRAYV-VQYMQMNGSMEKSLYMGVEVASV 760
+ RL + + + +IGV+TPY Q + Q+ + GS+ ++ +++ +V
Sbjct: 1649 SFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSI---IFKHLDIHTV 1705
Query: 761 DAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWS 820
D FQG+EKD II SCVR++ IGFL D RRLNVALTRAK L I+GN + L + ++
Sbjct: 1706 DGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFY 1765
Query: 821 HLLLHFREKG 830
L+ + +G
Sbjct: 1766 SLIEDAKTRG 1775
>At1g65810 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1050
Score = 164 bits (414), Expect = 8e-40
Identities = 103/295 (34%), Positives = 163/295 (54%), Gaps = 8/295 (2%)
Query: 542 IQKADVICCTCVGAGDKRLDYKFRTVLIDESTQASEPECLIPI-VKGAKQVVLVGDHQQL 600
+ A ++ CT + + + ++IDE+ Q E E IP+ ++G + +L+GD +QL
Sbjct: 531 LDNAYLLFCTASSSARLHMSSPIQLLVIDEAAQLKECESAIPLQLRGLQHAILIGDEKQL 590
Query: 601 GPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVT 660
+I A +A L +SLFERL+ LGH L +QYRM+P +S FP+ FY+ + + +
Sbjct: 591 PAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREFYDMKILDAPS 650
Query: 661 IEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVK 720
+ R+ + P ++ YGRE+ G G S N +E +I+++L+ K
Sbjct: 651 VRLRSYEKKFLPEKMYGPYSFINIAYGREQF-GEGYSSKNLVEVSVVAEIVSKLYSVSRK 709
Query: 721 PEQ---IGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVR 777
+ +GVI+PY+ Q + + + + E + V V SVD FQG E+D II+S VR
Sbjct: 710 TGRTISVGVISPYKAQVFAIQERIGEKYNTEGTFT--VSVRSVDGFQGGEEDIIIISTVR 767
Query: 778 ANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRN-SLWSHLLLHFREKGC 831
+N IGFLS+ +R NVALTRA+Y L ILGN L+ N S+W L+ + + C
Sbjct: 768 SNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVDDAKARNC 822
>Hs14211540 [A] KOG1804 RNA helicase
Length = 1003
Score = 162 bits (410), Expect = 2e-39
Identities = 176/634 (27%), Positives = 269/634 (41%), Gaps = 114/634 (17%)
Query: 260 LEHISVTWDLALNNRHLATFALSTFESNELKVAVGDEMILKYSGPQHAD--WTGKGFIIQ 317
LE + +TWD N L T + + V GD + S H + T KGF+ +
Sbjct: 360 LESVPMTWDPVDQNPRLLTLEVPGVTESRPSVLRGDHLFALLSSETHQEDPITYKGFVHK 419
Query: 318 LP-NSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGTSYIRMQEALRKFAVTKKSLSGF 376
+ + K F++ L S+ FT +R+Q R +T + L
Sbjct: 420 VELDRVKLSFSMSLL-SRFVDGLTFKVNFTF-----NRQPLRVQH--RALELTGRWLLWP 471
Query: 377 LYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQ---RPLS-LIQGPPGT 432
+ + + ++VP + DV+L E N Q A++H++ RP +I GPPGT
Sbjct: 472 MLFPVAPRDVPLLPSDVKLK---LYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGT 528
Query: 433 GKTVTSAT----IVYHLSKIHKQRVLVCAPSNVAVDHLAAKLH-SMGLKVVRLTAKSR-- 485
GKTVT +V HL K H +L CAPSN D L +L + + RL A SR
Sbjct: 529 GKTVTLVEAIKQVVKHLPKAH---ILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDI 585
Query: 486 ----EDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATI 541
ED++ + A ++V +K
Sbjct: 586 RMVPEDIKPCCNWDAKKG-----------------------------EYVFPAKKK---- 612
Query: 542 IQKADVICCTCVGAG-----DKRLDYKFRTVLIDESTQASEPECLIPIV---------KG 587
+Q+ V+ T + AG +D+ F + IDE+ EPE L+ I
Sbjct: 613 LQEYRVLITTLITAGRLVSAQFPIDH-FTHIFIDEAGHCMEPESLVAIAGLMEVKETGDP 671
Query: 588 AKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL---------GHIP---IRLEVQ 635
Q+VL GD +QLGPV+ GL SL ERL++ G+ P +L
Sbjct: 672 GGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRN 731
Query: 636 YRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNG 695
YR +P + + P+ ++YEG LQ + R P P++F G++E GN
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 696 TSYLNRIEAMNCEKIITRLF-------KDGVKPEQIGVITPYEGQRAYVVQYMQMNGSME 748
S+ N EA + L K + P +GVI+PY Q V + ++
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQ---VEKIRYCITKLD 848
Query: 749 KSL-----YMGVEVASVDAFQGREKDYIILSCVRANERNT-------IGFLSDPRRLNVA 796
+ L ++V SV+ FQG+E+ I++S VR+++ +GFL +P+R NVA
Sbjct: 849 RELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVA 908
Query: 797 LTRAKYGLIILGNPRALSRNSLWSHLLLHFREKG 830
+TRAK LII+GNP L + W L +E G
Sbjct: 909 VTRAKALLIIVGNPLLLGHDPDWKVFLEFCKENG 942
>CE19303 [L] KOG1803 DNA helicase
Length = 693
Score = 162 bits (409), Expect = 3e-39
Identities = 142/445 (31%), Positives = 210/445 (46%), Gaps = 48/445 (10%)
Query: 407 LNQSQSNAVKHVL--QRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVD 464
LN SQ AV + QR L IQGPPGTGKT A IV+ L K K++VLVCAP++VAV
Sbjct: 239 LNPSQVAAVSAAMNTQRNLLCIQGPPGTGKTRVIAEIVHQLMK-KKKKVLVCAPTHVAVR 297
Query: 465 HLAAKLHSMGLKVVRLTAKSRED----VESSVSELALHNLVSRSAXXXXXXXXXXXXXXX 520
+ A + G + + + E + ++ E H S+
Sbjct: 298 N--AMDATTGRMIEEMPEEKAEQQLCLLANTKDEFQNHKSASKLEEIKKQLSTMSTSDPL 355
Query: 521 XXSSSDTTKFVKLVRKS--EATIIQKADVICCTCVGAGDKRLDYKFRT--VLIDESTQAS 576
S L+R S + K V + K +Y + +++DE+ Q +
Sbjct: 356 YKKMSYE---YYLIRNSIFRSIFYPKLAVFSTLGTSSIQKLPEYHWNADVMIVDEAAQCT 412
Query: 577 EPECLIPIVK--GAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERL---ISLGHIPIR 631
EP +P++ K+++LVGD +QL V+L KA K SL E+L S +I I
Sbjct: 413 EPATWVPVLTTPSCKKLILVGDQKQLPAVVLSDKAMKGNFKLSLMEKLAEEFSSNNINIL 472
Query: 632 LEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPW---------PIHTIPMMF 682
L QYRMN ++ + + +FYE L T+ T+ R P PI I M
Sbjct: 473 LNEQYRMNKKIMNWSNEVFYENQLTAHSTVSDITL-RDICPNLPEDHVLNNPIMMINMEN 531
Query: 683 WANYGREEISGNGTSYLNRIEAMNCEKIITRLFKD-GVKPEQIGVITPYEGQRAYVVQYM 741
+ EE + S+ N E + + RL D G+ P+ I VI+PY Y
Sbjct: 532 VKDRSHEEFESH--SFTNTDELNLVTEYVNRLVVDLGINPKAIAVISPY---------YA 580
Query: 742 QMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAK 801
Q+ + +S+ V+V +VDAFQG E+ +I VR N+ IGFL++ RRLNVA+TRA+
Sbjct: 581 QIE-KLRRSIPFRVDVNTVDAFQGHERQVVIFCLVRDNDEGQIGFLNETRRLNVAVTRAR 639
Query: 802 YGLIILGNPRALSRN----SLWSHL 822
+++GN R + N L+ HL
Sbjct: 640 RQFVLIGNGRMMKGNKHLLKLYKHL 664
>At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 839
Score = 162 bits (409), Expect = 3e-39
Identities = 98/300 (32%), Positives = 161/300 (53%), Gaps = 8/300 (2%)
Query: 542 IQKADVICCTCVGAGDKRLDY--KFRTVLIDESTQASEPECLIPI-VKGAKQVVLVGDHQ 598
+Q AD+I CT GA + ++ +++DE+ Q E E + + + G + +L+GD
Sbjct: 503 LQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEF 562
Query: 599 QLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNG 658
QL ++ + A +SLFERL+ LGH L+VQYRM+P +S FP+ FY G +++
Sbjct: 563 QLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDA 622
Query: 659 VTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDG 718
+++ + + G+EE G+G S N +E +II+ LFK
Sbjct: 623 ENVKESIYQKRFLQGNMFGSFSFINVGRGKEEF-GDGHSPKNMVEVAVVSEIISNLFKVS 681
Query: 719 VKPEQ---IGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSC 775
+ +GV++PY+GQ + + + S + V SVD FQG E+D II+S
Sbjct: 682 CERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIIST 741
Query: 776 VRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALS-RNSLWSHLLLHFREKGCLVE 834
VR+N +GFL++ +R NVALTRA++ L ++GN L+ S+W+ L+ R +GC +
Sbjct: 742 VRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESRTRGCFYD 801
Score = 55.5 bits (132), Expect = 4e-07
Identities = 31/76 (40%), Positives = 49/76 (63%), Gaps = 8/76 (10%)
Query: 405 TELNQSQSNAVKHVLQ-------RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCA 457
T+LN SQ +A+ L+ + LI GPPGTGKT T AT+++ L K+ + + +VCA
Sbjct: 219 TKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKL-RCKTVVCA 277
Query: 458 PSNVAVDHLAAKLHSM 473
P+N A+ +A++L S+
Sbjct: 278 PTNTAIVQVASRLLSL 293
>At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 676
Score = 160 bits (404), Expect = 1e-38
Identities = 97/297 (32%), Positives = 160/297 (53%), Gaps = 8/297 (2%)
Query: 542 IQKADVICCTCVGAGDKRLDY--KFRTVLIDESTQASEPECLIPI-VKGAKQVVLVGDHQ 598
+Q AD+I CT GA + ++ +++DE+ Q E E + + + G + +L+GD
Sbjct: 340 LQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHAILIGDEF 399
Query: 599 QLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNG 658
QL ++ + A +SLFERL+ LGH L+VQYRM+P +S FP+ FY G +++
Sbjct: 400 QLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPNKEFYGGRIKDA 459
Query: 659 VTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDG 718
+++ + + G+EE G+G S N +E +II+ L+K
Sbjct: 460 ENVKESIYQKRFLKGNMFDSFSFINVGRGKEEF-GDGHSPKNMVEVAVISEIISNLYKVS 518
Query: 719 VKPEQ---IGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSC 775
+ +GV++PY+GQ + + + S + V SVD FQG E+D II+S
Sbjct: 519 CERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIIST 578
Query: 776 VRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALS-RNSLWSHLLLHFREKGC 831
VR+N +GFL++ +R NVALTRA++ L ++GN L+ S+W+ L+ R +GC
Sbjct: 579 VRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATLISESRTRGC 635
Score = 50.8 bits (120), Expect = 1e-05
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Query: 405 TELNQSQSNAVKHVLQ-------RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCA 457
T+LN SQ +A+ L+ + LI GPP TGKT T AT+++ L K+ + + +VCA
Sbjct: 56 TKLNSSQEDAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLKL-RCKTVVCA 114
Query: 458 PSNVAVDHLAAKLHSM 473
P+N A+ + ++L S+
Sbjct: 115 PTNTAIVQVTSRLLSL 130
>At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 638
Score = 160 bits (404), Expect = 1e-38
Identities = 131/452 (28%), Positives = 217/452 (47%), Gaps = 53/452 (11%)
Query: 405 TELNQSQSNAVKHVLQ-------RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCA 457
++LN SQ A+ L+ + LI GP KT T AT++ L K+ + + +VCA
Sbjct: 202 SKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKL-RCKTVVCA 257
Query: 458 PSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXX 517
P+N A+ + ++L + L+ K E + + L R
Sbjct: 258 PTNTAIVEVTSRL-------LALSNKYSEHATYGLGNIFLAGNQKRMRI----------- 299
Query: 518 XXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYKFRT---------VL 568
DT + + ++K + C + + +D T ++
Sbjct: 300 -------KDTDYLRNVFLDHRISKLRKLFLSTCGWKQSLESIIDLLENTETKTGNIEVLV 352
Query: 569 IDESTQASEPECLIPI-VKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGH 627
+DE+ Q E E + + + G + +L+GD QL ++ + + A +SLFERL+ LGH
Sbjct: 353 VDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLLGH 412
Query: 628 IPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYG 687
L+VQYRM+P +S FP FY G +++ +++ + + G
Sbjct: 413 KKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRG 472
Query: 688 REEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQ---IGVITPYEGQ-RAYVVQYMQM 743
+EE G+G S N +E +II+ LFK + + +GVITPY+GQ RA +
Sbjct: 473 KEEF-GDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQERIRDK 531
Query: 744 NGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYG 803
S+ L+ V V SVD FQG E+D II+S VR+N +GFLS+ +R NVALTRA++
Sbjct: 532 YSSLSGELFT-VNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRARHC 590
Query: 804 LIILGNPRALSRN-SLWSHLLLHFREKGCLVE 834
L ++GN L+R+ S+W++L+ + + C +
Sbjct: 591 LWVIGNESTLARSGSIWANLISDSKRRKCFYD 622
>7302834 [A] KOG1804 RNA helicase
Length = 765
Score = 159 bits (403), Expect = 2e-38
Identities = 141/450 (31%), Positives = 206/450 (45%), Gaps = 42/450 (9%)
Query: 408 NQSQSNAVKHVLQRPLS----LIQGPPGTGKTVTSATIVYHLSKIHKQ-RVLVCAPSNVA 462
N Q AV+ ++ P + ++ GPPGTGKT T + L Q R+LV A SN A
Sbjct: 252 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSA 311
Query: 463 VDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXX 522
D +A KL +RL + + + L + SRS
Sbjct: 312 CDTIALKLCEYIESNIRLQEHFAQQ-KLPEPDHQLIRVYSRSIYEKGFASVPSLLLKNSN 370
Query: 523 SSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYKFRT-VLIDESTQASEPECL 581
S +K R + II +C D Y F T + IDE+ ++EPE L
Sbjct: 371 CSKSIYDHIKASRIVKYGII--VATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEAL 428
Query: 582 IPIVKGAKQ-----VVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLG---------- 626
I I+ G KQ V+L GDH+QLG VI +A GL +SL ERL+
Sbjct: 429 IGIM-GIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNY 487
Query: 627 --HIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHT---IPMM 681
+ +RL YR +PQ+ + ++Y G L+ +A + W + T P++
Sbjct: 488 DRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAAN---WSVLTNPQFPII 544
Query: 682 FWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVK-PEQIGVITPYEGQRAYVVQY 740
F A +G N TS N +EA + RL D V E +G++ PY Q V +
Sbjct: 545 FQATHGVTNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKL 604
Query: 741 MQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRA 800
+Q G Y VEV SV+ +QGREK II S V++ +GF+ +PRR+NV L+RA
Sbjct: 605 LQSKG------YPNVEVGSVETYQGREKTIIIASLVKSF--TNMGFMCNPRRVNVLLSRA 656
Query: 801 KYGLIILGNPRALSRNSLWSHLLLHFREKG 830
K LI++GNP L +S + ++ ++ G
Sbjct: 657 KALLILVGNPVTLRHHSDFKFVINECKKHG 686
>At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1065
Score = 158 bits (399), Expect = 4e-38
Identities = 97/271 (35%), Positives = 148/271 (53%), Gaps = 6/271 (2%)
Query: 567 VLIDESTQASEPECLIPI-VKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISL 625
++IDE+ Q E E IP+ + G + ++LVGD +QL ++ + A +AG +SLFERL L
Sbjct: 567 LVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALL 626
Query: 626 GHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWAN 685
GH L +QYRM+ +S FP+ Y + + T+ QR + P ++
Sbjct: 627 GHKKYMLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIA 686
Query: 686 YGREEIS-GNGTSYLNRIEAMNCEKIITRLFKDGVKPE---QIGVITPYEGQRAYVVQYM 741
YGREE G G S N +E + II L + K + +GVI+PY+ Q + + +
Sbjct: 687 YGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKI 746
Query: 742 QMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAK 801
Q + + + +VD FQG E+D II+S VR+N +GFL + RR NV LTRA+
Sbjct: 747 QETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRAR 806
Query: 802 YGLIILGNPRAL-SRNSLWSHLLLHFREKGC 831
+ L ILGN L + S+W +L+ +E+GC
Sbjct: 807 FCLWILGNEATLMNSKSVWRNLIQDAKERGC 837
>At5g37160 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 871
Score = 156 bits (394), Expect = 2e-37
Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 11/306 (3%)
Query: 542 IQKADVICCTCVGAGD---KRLDYKFRTVLIDESTQASEPECLIPI-VKGAKQVVLVGDH 597
+Q AD+I CT + R+ +++DE+ Q E E + + + G +L+GD
Sbjct: 536 LQNADIIFCTASSVANINPARIG-SVDLLVVDETAQLKECESVAALQLPGLCHALLIGDE 594
Query: 598 QQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQN 657
QL ++ + + A +SLFERL+ +GH L VQYRM+P +S FP+ FY G + +
Sbjct: 595 YQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFYGGRITD 654
Query: 658 GVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKD 717
+++ + + G+EE G+G S N +E KII+ LFK
Sbjct: 655 AANVQESIYEKRFLQGNMFGTFSFINVGRGKEEF-GDGHSPKNMVEVAVISKIISNLFKV 713
Query: 718 GVKPEQ---IGVITPYEGQ-RAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIIL 773
+ +Q +GVI+PY+GQ RA + S+ + V SVD FQG E D II+
Sbjct: 714 SSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDVIII 773
Query: 774 SCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALS-RNSLWSHLLLHFREKGCL 832
S VR N +GFLS+ +R NVALTRA++ L ++GN L+ S+W+ L+ R +GC
Sbjct: 774 STVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELISESRTRGCF 833
Query: 833 VEGFLD 838
+ D
Sbjct: 834 YDAVDD 839
Score = 53.1 bits (126), Expect = 2e-06
Identities = 56/202 (27%), Positives = 88/202 (42%), Gaps = 26/202 (12%)
Query: 313 GFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGFTAVFVWRGTSYIRMQEALRKFAVTKKS 372
G++ + K SQ T CT VF+ T+ R+ AL K A
Sbjct: 150 GYVFSVYGDSKISVHFSRSISQSEKHTFCT----GVFLINITTNTRIWNALHKDAADSTL 205
Query: 373 LSGFLYYKILGQEVP-DVEFDVELPKS---IFVPHFTELNQSQSNAVKHVLQ-------R 421
+ L E E DV+ S + + +LN SQ A+ L+
Sbjct: 206 IQSVLQEDASATEQCFSCENDVDGSDSDRVVDIIRSAKLNSSQEAAILGFLKTRNCKHKE 265
Query: 422 PLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLT 481
+ LI GPPGTGKT T AT++ L ++ K + +VCAP+N + +A++L S+
Sbjct: 266 SVKLIWGPPGTGKTKTVATLLSTLMQL-KCKTVVCAPTNTTIVAVASRLLSL-------- 316
Query: 482 AKSREDVESSVSELALHNLVSR 503
S+E + + + A+ +VSR
Sbjct: 317 --SKETIVCAPTNSAIAEVVSR 336
>At5g37140 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 692
Score = 155 bits (392), Expect = 3e-37
Identities = 106/304 (34%), Positives = 161/304 (52%), Gaps = 21/304 (6%)
Query: 542 IQKADVICCTCVGAGDKRLDYKFRT-----VLIDESTQASEPECLIPI-VKGAKQVVLVG 595
+Q AD+I CT GA D RT +++DE+ Q E E + + + G + VL+G
Sbjct: 361 LQNADIIFCTASGAADMN---PIRTGSVDLLVVDEAAQLKECESVAALQLSGLRHAVLIG 417
Query: 596 DHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSL 655
D QL ++ + +A +SLFERL+ LGH L VQYRM+P +S FP+ FY G +
Sbjct: 418 DELQLPAMVHN----EAKFGRSLFERLVLLGHNKHLLNVQYRMHPSISRFPNKEFYGGRI 473
Query: 656 QNGVTIEQRTIARSTFPWPIHTIPMMFWANYGR-EEISGNGTSYLNRIEAMNCEKIITRL 714
++ +++ + + + N GR EE G+G S N +E +II+ L
Sbjct: 474 KDAANVQESIYQKRFLQG--NMFGSFSFINVGRGEEEFGDGHSPKNMVEVAVISEIISNL 531
Query: 715 FKDGVKPE---QIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYI 771
FK + +GV++PY+GQ +Q N S + V SVD FQG E+D I
Sbjct: 532 FKVSSERRIKMSVGVVSPYKGQ-VRAIQERTTNKYSSLSGLFTLNVRSVDGFQGGEEDII 590
Query: 772 ILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALS-RNSLWSHLLLHFREKG 830
I+S VR+N +GFL++ +R NVALTRA++ L ++GN L+ S W+ L+ R G
Sbjct: 591 IISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSSWAKLISESRTLG 650
Query: 831 CLVE 834
C +
Sbjct: 651 CFYD 654
>Hs20470741 [L] KOG1805 DNA replication helicase
Length = 1060
Score = 154 bits (388), Expect = 8e-37
Identities = 138/455 (30%), Positives = 217/455 (47%), Gaps = 66/455 (14%)
Query: 407 LNQSQSNAVKHVL-QRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDH 465
LN+ Q A+K VL + +LI G PGTGKT T T+V L VL+ + ++ AVD+
Sbjct: 626 LNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFS-VLLTSYTHSAVDN 684
Query: 466 LAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSS 525
+ KL + +RL + V ++ + + S
Sbjct: 685 ILLKLAKFKIGFLRLGQIQK--VHPAIQQFTEQEICR----------------------S 720
Query: 526 DTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYK-FRTVLIDESTQASEPECLIPI 584
+ K + L+ + + ++ TC+G K F ++DE++Q S+P CL P+
Sbjct: 721 KSIKSLALLEE----LYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPL 776
Query: 585 VKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSE 644
+++ VLVGDHQQL P++L+R+A G+ +SLF+RL ++L VQYRMN ++
Sbjct: 777 FF-SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMS 835
Query: 645 FPSNMFYEGSLQNG----------------VTIEQRTIA-RSTFPWPIHTI----PMMFW 683
+ + YEG L+ G V +E A S PW + P+ F
Sbjct: 836 LSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFL 895
Query: 684 AN---YGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQY 740
E++ G S N EA + + K G P IG+I PY Q +
Sbjct: 896 NTDKVPAPEQVEKGGVS--NVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKII--- 950
Query: 741 MQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIG-FLSDPRRLNVALTR 799
N + +S+ M VEV +VD +QGR+K +++S VR+N+ T+G L D RRLNVA+TR
Sbjct: 951 ---NDLLARSIGM-VEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITR 1006
Query: 800 AKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVE 834
AK+ LI+LG +L+ LL H + +++
Sbjct: 1007 AKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1041
>At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1939
Score = 152 bits (385), Expect = 2e-36
Identities = 113/334 (33%), Positives = 172/334 (50%), Gaps = 40/334 (11%)
Query: 533 LVRKSEATIIQKADVICCTCVGAGDKRL-----------------DYKFRTVLIDESTQA 575
L +K +I+++A ++ T G G D F V+IDE+ QA
Sbjct: 1381 LKQKLRKSILKEAQIVVTTLSGCGGDLYSVCAESLAAHKFGSPSEDNLFDAVVIDEAAQA 1440
Query: 576 SEPECLIPIV----KGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIR 631
EP LIP+ +G K ++VGD +QL +L A + S+FERL G+ +
Sbjct: 1441 LEPATLIPLQLLKSRGTK-CIMVGDPKQLPATVLSNVASKFLYECSMFERLQRAGYPILM 1499
Query: 632 LEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANY-GREE 690
L QYRM+P++ FPS FY+ L NGV + ++ + F H P +F+ G+E
Sbjct: 1500 LTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSKS---APFHENHHLGPYVFYDIVDGQEH 1556
Query: 691 ISGNGTSYLNRIEAMNCEKIITRLFKDGVKPE----QIGVITPYEGQRAYVVQYMQMNGS 746
SG+ +S N EA +++ R FK E +IG+ITPY+ Q A V + G+
Sbjct: 1557 RSGDSSSVCNEQEAEAAVQLL-RFFKKRYPSEFVAGRIGIITPYKRQLA--VLRSRFTGA 1613
Query: 747 MEKSLYMGVEVASVDAFQGREKDYIILSCVRAN-------ERNTIGFLSDPRRLNVALTR 799
+ +E+ +VD FQG+E D ++LS VRA ++ IGF++D RR+NVALTR
Sbjct: 1614 FGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFVADVRRMNVALTR 1673
Query: 800 AKYGLIILGNPRALSRNSLWSHLLLHFREKGCLV 833
AK L +LGN R L R+ W L+ +E+ ++
Sbjct: 1674 AKLSLWVLGNTRTLQRDHNWGALVKDAKEREVII 1707
>7303245 [A] KOG1804 RNA helicase
Length = 1194
Score = 150 bits (378), Expect = 1e-35
Identities = 133/486 (27%), Positives = 220/486 (44%), Gaps = 64/486 (13%)
Query: 385 EVPDVEFDVELPKSIFVPHFTELNQS-------QSNAVKHVLQRPLS----LIQGPPGTG 433
+V + F E+P + +LN Q AV+ + P ++ GPPGTG
Sbjct: 444 DVQRILFPGEIPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRLKAPYIVFGPPGTG 503
Query: 434 KTVTSATIVYHLSKIHKQ-RVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSV 492
KT T +Y L + +LV A SN A D +A L+++R AK+ + +
Sbjct: 504 KTSTIVEAIYQLYINRPETHILVLAGSNTACDEVA-------LRLLRAIAKAPQSQPRPL 556
Query: 493 SELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTC 552
+ + N R S+ T F V+ + + ++ CT
Sbjct: 557 TRIFSANCDRR--------IDNIDDLLLEYSNMYTVHFYPAVQA-----VHQYRIVICTL 603
Query: 553 -----VGAGDKRLDYKFRTVLIDESTQASEPECLIPI---VKGAKQVVLVGDHQQLGPVI 604
+ G + + V +DE+ ++E E L+ I + ++L GDH+QLGPV+
Sbjct: 604 SLAGKLSTGGFAANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVL 663
Query: 605 LDRKAGDAGLKQSLFERLISL------------GHIPIRLEVQYRMNPQLSEFPSNMFYE 652
++A + GL +LFERL+ + RL +R +P++ +NM+YE
Sbjct: 664 QSQRANEWGLGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYE 723
Query: 653 GSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIIT 712
G L+ +E + F P T P+MF + +G + + S N E +
Sbjct: 724 GHLRTEAPMEIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVK 783
Query: 713 RLFKDGVKPEQ-----IGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGRE 767
L G+ E+ IG+I+PY+ Q + + + M + ++ SV+ FQG+E
Sbjct: 784 DLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRN------WSQIDCGSVELFQGKE 837
Query: 768 KDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFR 827
K II+S VR+ +GFL++ RRLNV L+R LI++GNPR LS+NS + H++ R
Sbjct: 838 KHVIIVSFVRSFTPK-LGFLNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCR 896
Query: 828 EKGCLV 833
+ LV
Sbjct: 897 NRKTLV 902
>SPBC16D10.04c [L] KOG1805 DNA replication helicase
Length = 1398
Score = 148 bits (374), Expect = 4e-35
Identities = 156/583 (26%), Positives = 270/583 (45%), Gaps = 95/583 (16%)
Query: 353 GTSYIRMQEALRKFAVTKKSLSGFLYYKILGQE---VPDVEFDVELPK----SIFVPHFT 405
G+++ R + +F+ S+ G L +L + D+ ++ PK ++ P F
Sbjct: 871 GSNHTRYRIDKDEFSSGIASIRGTLMSSVLPDAPLIIRDMIIRLKPPKFCNSALIDPEFL 930
Query: 406 E-LNQSQSNAVK--HVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVA 462
+ LN+ Q A+K H + SLI G PGTGKT T ++++ L K+++L+ + +++A
Sbjct: 931 KCLNEDQITALKKCHAAEH-YSLILGMPGTGKTTTISSLIRSLLA-KKKKILLTSFTHLA 988
Query: 463 VDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXX 522
VD++ KL +VRL + + +H LV
Sbjct: 989 VDNILIKLKGCDSTIVRLGSPHK-----------IHPLVKEFCL---------------- 1021
Query: 523 SSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDY-KFRTVLIDESTQASEPECL 581
++ T F L S + ++ C+ +G + KF +IDE++Q P CL
Sbjct: 1022 --TEGTTFDDLA--SLKHFYEDPQIVACSSLGVYHSIFNKRKFDYCIIDEASQIPLPICL 1077
Query: 582 IPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGH--IPIRLEVQYRMN 639
P+ + A++ VLVGDH QL P++ + + GL SLF +L+S H L +QYRMN
Sbjct: 1078 GPL-QLAEKFVLVGDHYQLPPLVKNSRTSKDGLSLSLF-KLLSEKHPEAVTTLRLQYRMN 1135
Query: 640 PQLSEFPSNMFYEGSLQNGV-TIEQRTI-------------ARSTFPW------PIHTIP 679
++ S + Y G+L G TI Q+ + + S+ W P H++
Sbjct: 1136 EDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDSSSSLHWVNKLINPSHSVI 1195
Query: 680 MMFWANYGREEISG----NGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRA 735
+ ++I G N EA E+ ++ + GVK IG+I+ Y+ Q
Sbjct: 1196 F-----FNTDDILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQSSIGIISIYKSQ-- 1248
Query: 736 YVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIG-FLSDPRRLN 794
V+ + N + +E+ +VD +QGR+KD I++S VR+N +N +G L D RLN
Sbjct: 1249 --VELLSKN----LKSFTEIEINTVDRYQGRDKDIILISFVRSNSKNLVGELLRDWHRLN 1302
Query: 795 VALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLTKPSR-A 853
VAL+RAK I+ G+ LS +++ SHLL + + +++ + + P +
Sbjct: 1303 VALSRAKVKCIMFGSLSTLSSSNIVSHLLKLLEKNKWIFTLNENDIATKFDENSSPIKDC 1362
Query: 854 PRKAPSNNSSYTQYAGQRDFDTQSLVSFGGQNVVEKSFIPNTD 896
+ A +NN+ QR F++ N+ EK+ +P +
Sbjct: 1363 SQVATTNNAKVIIRKNQRFFNS--------DNLCEKAILPQLE 1397
>ECU05g1110 [L] KOG1803 DNA helicase
Length = 563
Score = 147 bits (371), Expect = 8e-35
Identities = 140/440 (31%), Positives = 206/440 (46%), Gaps = 54/440 (12%)
Query: 384 QEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVY 443
++V DV+ + S + + LN SQ +AV+ + R I GPPGTGKT T I+
Sbjct: 153 KDVWDVKKSIAAETSDLNFYDSSLNSSQRSAVEMLGCRTPYKILGPPGTGKTRTVVEIIS 212
Query: 444 HLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSR 503
L + VLVC PSNV+VD++ + + + S + SS L+ NL
Sbjct: 213 QLLAANSS-VLVCGPSNVSVDNIIERF--LRSRYFLCNQPSFYRLGSSTKGLSHLNLDFL 269
Query: 504 SAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGA-GDKRLDY 562
+ + + K V + +A + V+ T + +KR
Sbjct: 270 AESHTKFMKEEKGDRSFRRDLRERQR--KFVEEKQAN----SPVVFATLFSSLKEKR--- 320
Query: 563 KFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERL 622
KF VL+DE+ QASE E + +VKG + +LVGD QL P SL+E
Sbjct: 321 KFDWVLVDEACQASEAESFLAVVKG-RAFILVGDPMQLCPET-----------SSLYE-- 366
Query: 623 ISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMF 682
SL + L QYRM L F + +FY G +++ T E + +F ++F
Sbjct: 367 -SLALPTMLLNEQYRMPSDLLRFSNEVFYRGQVKSA-TRECTPVFGKSF--------ILF 416
Query: 683 WANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQ 742
E G S N EA I+ L K EQ+G+I PY Q V+ +
Sbjct: 417 VDTQYFELYESGGVSKSNIGEAEIVRSIVGIL-----KEEQVGIIAPYTSQ---VLLLRE 468
Query: 743 MNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKY 802
M + VEV++VD FQG+E+DYIIL+ VR N+R+ GFL + +RLNVALTR +
Sbjct: 469 M---------VDVEVSTVDGFQGQERDYIILTLVRCNDRDDFGFLDNGKRLNVALTRCRK 519
Query: 803 GLIILGNPRALSRNSLWSHL 822
GL+I+G+ R R+ + L
Sbjct: 520 GLVIVGDSRTFRRSETFRKL 539
>At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 660
Score = 145 bits (367), Expect = 2e-34
Identities = 96/279 (34%), Positives = 147/279 (52%), Gaps = 7/279 (2%)
Query: 542 IQKADVICCTCVGAGDKRLDY--KFRTVLIDESTQASEPECLIPI-VKGAKQVVLVGDHQ 598
+Q A +I CT GA + + +++DE+ Q E E + + ++G VL+GD
Sbjct: 378 LQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQGLHHAVLIGDEL 437
Query: 599 QLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNG 658
QL ++ A +SLFERL SLGH L VQYRM+P +S FP+ FY G + +
Sbjct: 438 QLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPNMEFYGGKISDA 497
Query: 659 VTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDG 718
+++ T + + G+EE G+G S N +E +I+T L K
Sbjct: 498 EIVKESTYQKRFLQGNMFGSFSFINVGLGKEEF-GDGHSPKNMVEIAVVSEILTNLLKVS 556
Query: 719 VKPE---QIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSC 775
+ + +GVI+PY+ Q + + + + + + V SVD FQG E+D II+S
Sbjct: 557 SETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIIST 616
Query: 776 VRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALS 814
VR+N IGFLS+ +R NVALTRA++ L ++GN R LS
Sbjct: 617 VRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTLS 655
>At1g08840 [L] KOG1805 DNA replication helicase
Length = 1296
Score = 139 bits (350), Expect = 2e-32
Identities = 133/444 (29%), Positives = 205/444 (45%), Gaps = 69/444 (15%)
Query: 407 LNQSQSNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDH 465
LN Q A+ +L + +LI G PGTGKT T V L I +L+ + +N AVD+
Sbjct: 888 LNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALL-IRGSSILLASYTNSAVDN 946
Query: 466 LAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSS 525
L KL + G++ +R+ E S + N+ S
Sbjct: 947 LLIKLKAQGIEFLRIGRDEAVHEEVRESCFSAMNMCS----------------------- 983
Query: 526 DTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRL-DYKFRTVLIDESTQASEPECLIPI 584
V+ ++K + + V+ TC+G L + +F +IDE+ Q + P + P+
Sbjct: 984 -----VEDIKKK----LDQVKVVASTCLGINSPLLVNRRFDVCIIDEAGQIALPVSIGPL 1034
Query: 585 VKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIR-LEVQYRMNPQLS 643
+ A VLVGDH QL P++ +A + G+ SLF RL I L+ QYRM +
Sbjct: 1035 LF-ASTFVLVGDHYQLPPLVQSTEARENGMGISLFRRLSEAHPQAISVLQNQYRMCRGIM 1093
Query: 644 EFPSNMFYEGSLQNG-VTIEQRTI----ARSTFPW------PIHTIPM----MFWANYGR 688
E + + Y L G + T+ + ST PW P T+ M A R
Sbjct: 1094 ELSNALIYGDRLCCGSAEVADATLVLSTSSSTSPWLKKVLEPTRTVVFVNTDMLRAFEAR 1153
Query: 689 EEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSME 748
++ + N N +EA +I+ L +GV + IG+ITPY Q + + +
Sbjct: 1154 DQNAIN-----NPVEASIIAEIVEELVNNGVDSKDIGIITPYNSQASLIQHAIPTTP--- 1205
Query: 749 KSLYMGVEVASVDAFQGREKDYIILSCVRANER---NTIGFLSDPRRLNVALTRAKYGLI 805
VE+ ++D +QGR+KD I++S VR+ E+ + L D R+NVALTRAK LI
Sbjct: 1206 ------VEIHTIDKYQGRDKDCILVSFVRSREKPRSSASSLLGDWHRINVALTRAKKKLI 1259
Query: 806 ILGNPRALSRNSLWSHLLLHFREK 829
++G+ R LSR L LL +E+
Sbjct: 1260 MVGSQRTLSRVPLLMLLLNKVKEQ 1283
>7292369_2 [A] KOG1804 RNA helicase
Length = 754
Score = 135 bits (341), Expect = 2e-31
Identities = 129/472 (27%), Positives = 206/472 (43%), Gaps = 77/472 (16%)
Query: 407 LNQSQSNAVKHVLQRPLSLIQ----GPPGTGKTVTSA-TIVYHLSKIHKQRVLVCAPSNV 461
LN Q AV ++L+ I GPPG+GKT+T T++ + + R+LV PSN
Sbjct: 264 LNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNS 323
Query: 462 AVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXX 521
+ D + +L S+ ++ L +N V +
Sbjct: 324 SADLVTKRL-----------IDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGA 372
Query: 522 XSSSDTTKFVK---LVRKSEATIIQKADVICCTCVGAGD-KRLDYK---FRTVLIDESTQ 574
S + V L + +A I + TC G+ +L + F VL DE+ Q
Sbjct: 373 VGSCEDKMMVTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQ 432
Query: 575 ASEPECLIPIV---KGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLI-------- 623
+EPE ++PIV K QVVL GD +QL ++ R A G S ERL+
Sbjct: 433 CTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKD 492
Query: 624 ------SLGHIPI---RLEVQYRMNPQLSEFPSNMFYEGSL----------QNGVTIEQR 664
S G+ P+ +L YR P + S +FY+ L ++ + + R
Sbjct: 493 LQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLR 552
Query: 665 TIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQI 724
+ S P F+ G + + S+ N E + L++ V +QI
Sbjct: 553 CVFESEKDIP-QAHGTFFYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQI 611
Query: 725 GVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVA-----SVDAFQGREKDYIILSCVRAN 779
G+ITPY+ Q M +S+++G +V SV+ FQG+E+D I++S VR++
Sbjct: 612 GIITPYQKQV-----------KMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSS 660
Query: 780 E-------RNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLL 824
E R ++GF+ +RLNVA++RA+ +II GNP L+ + W L+L
Sbjct: 661 EEILRMDARFSLGFVRCSKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLIL 712
>CE08664 [L] KOG1803 DNA helicase
Length = 633
Score = 132 bits (332), Expect = 3e-30
Identities = 125/451 (27%), Positives = 207/451 (45%), Gaps = 50/451 (11%)
Query: 408 NQSQSNAVKHVLQ--RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDH 465
N+ Q A+K L R L IQGPPGTGKT T ++ L + K++V+V AP+ A+
Sbjct: 75 NEKQRTAIKMALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQ-QKKQVVVLAPTREAL-- 131
Query: 466 LAAKLHSMGLKVV-RLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSS 524
A + M K + R+ K E +E +++++S +
Sbjct: 132 --ANIRMMTKKTLKRMGIKVHEHALMDTNEY--RDVINKSDRALMAAEEVRDLRKAFDNG 187
Query: 525 SDTTKFVKLVRKSEATIIQK---ADVICCTCVG---AGDKRLDYKFR-------TVLIDE 571
T + +R+S ++ A+VI V G +D+ + +IDE
Sbjct: 188 EITENVLDEMRQSIINRVRNEVGAEVIGNVRVAFATIGASFVDFVMKHKKFDPCLCIIDE 247
Query: 572 STQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGH--IP 629
+ Q E + P V K++V+ GD +QL ++ +A GL+ S+ +R++ +
Sbjct: 248 AAQVMEAQTW-PAVYKMKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKKNNFSW 306
Query: 630 IRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWP------------IHT 677
I LE QYR N +++ + + FY L+ V + ++ P P I T
Sbjct: 307 IMLENQYRSNAKIATWSNTCFYHNQLKTDVKCHEYSLHTILNPQPKKFRNLFDPLVLIDT 366
Query: 678 ---------IPMMFWANYGREEISGN--GTSYLNRIEAMNCEKIITRLFKDGVKPEQIGV 726
+ A + I+ G SY N EA RL K GV+P I +
Sbjct: 367 SLERDVEKRLETYEHAVFDTNSINKTKQGFSYANLAEAKIAIGHYQRLLKYGVQPSDIAI 426
Query: 727 ITPYEGQRAYVVQYMQMNGSMEKSL-YMGVEVASVDAFQGREKDYIILSCVRANERNTIG 785
ITPY+GQ + V + M+ G+ ++ + +VD+ QG+E + +I + VR+N R T+G
Sbjct: 427 ITPYKGQTSLVTKLMEEFGAETGYTDFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMG 486
Query: 786 FLSDPRRLNVALTRAKYGLIILGNPRALSRN 816
F+S+ RRLNV +TRAK + +GN L+ +
Sbjct: 487 FVSELRRLNVVITRAKRHFMFIGNGYLLAES 517
>7301121 [L] KOG1807 Helicases
Length = 903
Score = 128 bits (321), Expect = 5e-29
Identities = 124/472 (26%), Positives = 200/472 (42%), Gaps = 54/472 (11%)
Query: 401 VPHFTELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQR----VLVC 456
+P LN+SQ A K L R S+IQGPPGTGKT S +V L + K ++V
Sbjct: 444 LPEDLHLNESQKTAFKEALCREFSIIQGPPGTGKTHLSVQLVNSLIQNAKALGTGPIIVL 503
Query: 457 APSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVS-------ELA------------- 496
+N ++D K+ +++R +SR+ S + EL
Sbjct: 504 TYTNNSLDKFLVKISRYTQEILRFGNQSRDPQISKFNLSTTIKPELVPPRLKRIWWLVNC 563
Query: 497 -----LHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKS-EATIIQKADVICC 550
NL A + + ++ +R + + ++ D++
Sbjct: 564 EYKEKFRNLQGLYANFDGSEESYQDTLAAQEKLNQVAERIETLRMVFQFFLAREKDLLAM 623
Query: 551 TCVGAGDKRLDYKF---RTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDR 607
T A ++ + VL +E+ + E + + + V+LVGDH+QL P R
Sbjct: 624 TTTCAARHNFLFRLLQSKCVLFEEAAEIQEAHIVACLTPHTEHVILVGDHKQLQPFSGSR 683
Query: 608 KAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIA 667
K SLFERLI G RL +QYRM +SE Y+ L + E I
Sbjct: 684 KVPQI----SLFERLIVAGLPFSRLNLQYRMRSCISELLVPSIYDELLCSESVKEYEDIR 739
Query: 668 RSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLF-KDGVKPEQIGV 726
+ +++ + + E + S N EA K+ L K K I +
Sbjct: 740 LMS--------KNLYFVQHNQPEHCMSDMSIGNLYEAGVLAKLTEFLIQKAQYKHSDIVI 791
Query: 727 ITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGF 786
++PY GQ + ++ ++ V+VASVD+FQG E + ++LS VR+N IGF
Sbjct: 792 LSPYNGQIECI------KNALPQNYRSTVQVASVDSFQGLEANIVLLSLVRSNISGRIGF 845
Query: 787 LSDPRRLNVALTRAKYGLIILGNPRALSRN--SLWSHLLLHFREKGCLVEGF 836
L R+ VAL+RA++ L I+GN L +W+ ++ +E + E F
Sbjct: 846 LRQANRVCVALSRARWALYIVGNVTILKDTFPKIWNPIVKRLKENNAIGEAF 897
>CE23725 [L] KOG1805 DNA replication helicase
Length = 1069
Score = 127 bits (320), Expect = 6e-29
Identities = 120/437 (27%), Positives = 203/437 (45%), Gaps = 78/437 (17%)
Query: 406 ELNQSQSNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVD 464
+LN Q AV H L +++G PG+GKT + ++ L +K +VL+ A ++ AVD
Sbjct: 649 KLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNK-KVLLAAFTHSAVD 707
Query: 465 HLAAKLHS--MGLKVVRLTAKS--REDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXX 520
++ KL K++RL + S ++D++ + L N S
Sbjct: 708 NILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSE----------------- 750
Query: 521 XXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRL-DYK-FRTVLIDESTQASEP 578
++ VRK +++ ++ CTC + L Y+ F V++DE++ EP
Sbjct: 751 --------EYYAAVRK----VMKTTPIVACTCHHVPRELLFSYRHFDVVIVDEASMVLEP 798
Query: 579 ECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERL-ISLGHIPIRLEVQYR 637
L+P++ + + VLVGD +QL P+++ RKA G S E+L S + + L QYR
Sbjct: 799 -LLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGVVVSLTSQYR 857
Query: 638 MNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFP-WPIHTIPMMFWANYGREEISGN-- 694
MN ++S S +FYE L G +++RS+ + + M +++ R+ +SG+
Sbjct: 858 MNREISVLSSKLFYENRLICG----NESVSRSSLDRTGDYIVAMDDGSDHIRKALSGDIK 913
Query: 695 ----------------------GTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEG 732
G N EA ++ + GVKP +IGV++ Y
Sbjct: 914 DSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRR 973
Query: 733 QRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIG-FLSDPR 791
Q ++ + + +EV ++D++QGREK II S N L D R
Sbjct: 974 QVDHIRGILNSD---------ELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDER 1024
Query: 792 RLNVALTRAKYGLIILG 808
R+NVALTRA+ L+++G
Sbjct: 1025 RVNVALTRARQKLVVVG 1041
>CE02219 [L] KOG1805 DNA replication helicase
Length = 1105
Score = 127 bits (320), Expect = 6e-29
Identities = 120/437 (27%), Positives = 203/437 (45%), Gaps = 78/437 (17%)
Query: 406 ELNQSQSNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVD 464
+LN Q AV H L +++G PG+GKT + ++ L +K +VL+ A ++ AVD
Sbjct: 685 KLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNK-KVLLAAFTHSAVD 743
Query: 465 HLAAKLHS--MGLKVVRLTAKS--REDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXX 520
++ KL K++RL + S ++D++ + L N S
Sbjct: 744 NILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSE----------------- 786
Query: 521 XXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRL-DYK-FRTVLIDESTQASEP 578
++ VRK +++ ++ CTC + L Y+ F V++DE++ EP
Sbjct: 787 --------EYYAAVRK----VMKTTPIVACTCHHVPRELLFSYRHFDVVIVDEASMVLEP 834
Query: 579 ECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERL-ISLGHIPIRLEVQYR 637
L+P++ + + VLVGD +QL P+++ RKA G S E+L S + + L QYR
Sbjct: 835 -LLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGVVVSLTSQYR 893
Query: 638 MNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFP-WPIHTIPMMFWANYGREEISGN-- 694
MN ++S S +FYE L G +++RS+ + + M +++ R+ +SG+
Sbjct: 894 MNREISVLSSKLFYENRLICG----NESVSRSSLDRTGDYIVAMDDGSDHIRKALSGDIK 949
Query: 695 ----------------------GTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEG 732
G N EA ++ + GVKP +IGV++ Y
Sbjct: 950 DSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRR 1009
Query: 733 QRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIG-FLSDPR 791
Q ++ + + +EV ++D++QGREK II S N L D R
Sbjct: 1010 QVDHIRGILNSD---------ELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDER 1060
Query: 792 RLNVALTRAKYGLIILG 808
R+NVALTRA+ L+++G
Sbjct: 1061 RVNVALTRARQKLVVVG 1077
>7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1417
Score = 124 bits (311), Expect = 7e-28
Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 39/306 (12%)
Query: 542 IQKADVICCT---CVGAGDKRLDYKFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQ 598
+ +A++IC T CV + +D+ F ++DE+TQ +EP L+P+ G +VLVGD Q
Sbjct: 1103 VTRANIICTTLSSCVKLANY-VDF-FDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQ 1160
Query: 599 QLGPVILDRKAGDAGLKQSLFERL-------------ISLGHIPI-RLEVQYRMNPQLSE 644
QL V+L +KA D GL S+F+R+ L H + +L QYRM+P++
Sbjct: 1161 QLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICR 1220
Query: 645 FPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEA 704
+P+ FYE L N + A P+ + + Y + S N EA
Sbjct: 1221 WPNQYFYEDQLINAECTAR--FASPLIPYCVINL------KYTCDSNGAQNKSISNNEEA 1272
Query: 705 MNCEKIITRLFKD-GVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAF 763
K++T + K K G+I+PY+ Q + Q + +M + +VD++
Sbjct: 1273 RFVAKLLTEMDKHMPSKRFSYGLISPYQNQCYALSQVIPS--------HMNITPQTVDSY 1324
Query: 764 QGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLL 823
QG EKD II+S R GFL++ +RLNVALTR + L+I GN L +W +LL
Sbjct: 1325 QGLEKDVIIISNART---RGCGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVEMWRNLL 1381
Query: 824 LHFREK 829
R++
Sbjct: 1382 DDARKR 1387
Score = 57.4 bits (137), Expect = 1e-07
Identities = 37/95 (38%), Positives = 52/95 (53%), Gaps = 13/95 (13%)
Query: 392 DVELPKSIFV-PHFTELNQSQSNAVKHVLQR-------PLSLIQGPPGTGKT-----VTS 438
+V LPK F +LN+ Q N V H QR L+LIQGPPGTGK+ +
Sbjct: 897 EVSLPKQPFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCL 956
Query: 439 ATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSM 473
T+ + +K +++L+CA SN AVDH+ L S+
Sbjct: 957 QTLYGNAAKTLDRKILICAHSNTAVDHIVGLLGSV 991
>Hs20162560 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 239
Score = 123 bits (308), Expect = 2e-27
Identities = 81/217 (37%), Positives = 116/217 (53%), Gaps = 18/217 (8%)
Query: 625 LGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWA 684
+GH PI L QYR +P +S +++FY+G+L NGVT +R+ P + F+
Sbjct: 1 MGHKPILLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLP------TLCFYN 54
Query: 685 NYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMN 744
G E+I + S+ N EA K+I L G+ IGVIT Y+ Q Y + ++
Sbjct: 55 VKGLEQIERDN-SFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQM-YKLCHLLSA 112
Query: 745 GSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGL 804
V+V++VDAFQG EK+ IILSCVR + +GF+ +R+NVALTR K L
Sbjct: 113 VDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHL 169
Query: 805 IILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQ 841
+I+GN L +N LW ++ H EG D LQ
Sbjct: 170 LIVGNLACLRKNQLWGRVIQH-------CEGREDGLQ 199
>YHR164c [L] KOG1805 DNA replication helicase
Length = 1522
Score = 121 bits (304), Expect = 5e-27
Identities = 130/451 (28%), Positives = 196/451 (42%), Gaps = 105/451 (23%)
Query: 405 TELNQSQSNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAV 463
T LN +Q A+ V++ +LI G PGTGKT A I+ L K RVL+ + ++ AV
Sbjct: 1050 TTLNLNQKEAIDKVMRAEDYALILGMPGTGKTTVIAEIIKILVSEGK-RVLLTSYTHSAV 1108
Query: 464 DHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXS 523
D++ KL + + ++RL K + +H
Sbjct: 1109 DNILIKLRNTNISIMRLGMKHK-----------VH------------------------- 1132
Query: 524 SSDTTKFVKLVRKSEA-----TIIQKADVICCTCVGAGD-------KRLDYKFRTVLIDE 571
DT K+V ++ + I V+ TC+G D K DY V++DE
Sbjct: 1133 -PDTQKYVPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDY----VILDE 1187
Query: 572 STQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPI- 630
++Q S P L P+ G + ++VGDH QL P++ + A GL++SLF+ +
Sbjct: 1188 ASQISMPVALGPLRYG-NRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVA 1246
Query: 631 RLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREE 690
L +QYRM + + + Y+ L+ G A+S +PM + R E
Sbjct: 1247 ELTLQYRMCGDIVTLSNFLIYDNKLKCG---NNEVFAQSL------ELPMPEALSRYRNE 1297
Query: 691 ISGNGTSYLNRI----------EAMNCEKIITRLFKD---------------------GV 719
S N +L I NC II + KD GV
Sbjct: 1298 -SANSKQWLEDILEPTRKVVFLNYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGV 1356
Query: 720 KPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRAN 779
E IGV+T Y Q + + K++Y G+E+ + D FQGR+K II+S VR N
Sbjct: 1357 PCEDIGVMTLYRAQLRLLKKI------FNKNVYDGLEILTADQFQGRDKKCIIISMVRRN 1410
Query: 780 ER-NTIGFLSDPRRLNVALTRAKYGLIILGN 809
+ N L + RR+NVA+TRAK LII+G+
Sbjct: 1411 SQLNGGALLKELRRVNVAMTRAKSKLIIIGS 1441
>SPCC1739.03 [L] KOG1807 Helicases
Length = 1015
Score = 120 bits (301), Expect = 1e-26
Identities = 92/301 (30%), Positives = 148/301 (48%), Gaps = 39/301 (12%)
Query: 536 KSEATIIQKADVICCTCVGAGDKRLDYKFRTVL---------IDESTQASEPECLIPIVK 586
K A +++ A+VI T G K+R +L I+E+ E + +
Sbjct: 674 KRAAILLRGANVIGMTTTGLN------KYRDILERINPKICFIEEAADVLEGPIIPAVFP 727
Query: 587 GAKQVVLVGDHQQLGP--VILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSE 644
+Q+VL+GDH+QL P + L S+FERL+ RL +Q RM+PQ+
Sbjct: 728 SLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFERLVENDMEYTRLTMQRRMHPQIRR 787
Query: 645 FPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMM-----FWANYGREEISGNGTSYL 699
S+++ E + T WP +IP M F+ + R E + S +
Sbjct: 788 LVSSVY-----------EDLSDYEITKYWP--SIPGMGEIRRFFLTHSRIEDNDGFASKI 834
Query: 700 NRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVAS 759
N EA + L +GV+P++I +T Y Q+ + + + + + EK ++VA+
Sbjct: 835 NLFEAQMLVQFAVYLINNGVEPQKITCLTFYAAQKDLIERLLSESLNREKHF---IKVAT 891
Query: 760 VDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSR-NSL 818
VD +QG E D ++LS VR N+R +GFLS P R+ V+L+RA+ GL I GN + ++ N L
Sbjct: 892 VDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLFIFGNAQLVAESNPL 951
Query: 819 W 819
W
Sbjct: 952 W 952
Score = 52.4 bits (124), Expect = 3e-06
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 407 LNQSQSNAVKHVLQRPLSLIQGPPGTGKT-VTSATIVYHLSKIHKQ--RVLVCAPSNVAV 463
L+ SQ A + +L + LS+IQGPPGTGK+ VT I L H +LV +N AV
Sbjct: 372 LDSSQLKAYQSMLTKRLSIIQGPPGTGKSFVTLKAIETLLENTHSHVLPILVACQTNHAV 431
Query: 464 DHLAAKLHSMGLKVVRLTAKSREDVESSVS 493
D + +L G V+RL +++++ ++V+
Sbjct: 432 DQILIRLLHQGASVMRLGSRTKDPEIAAVT 461
>Hs14786304_1 [L] KOG1807 Helicases
Length = 1839
Score = 120 bits (300), Expect = 1e-26
Identities = 88/304 (28%), Positives = 150/304 (48%), Gaps = 17/304 (5%)
Query: 529 KFVKLVRKSEATIIQKADVICCTCVGAGDKRL---DYKFRTVLIDESTQASEPECLIPIV 585
+ +L + + I++ A V+ T GA R + R V+++E+ + E + +
Sbjct: 962 RMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATLS 1021
Query: 586 KGAKQVVLVGDHQQLGPVI-LDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSE 644
K + ++L+GDHQQL P + A + L+ SLFERL+ + +RL Q+RM P+++
Sbjct: 1022 KACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVRLNYQHRMCPEIAR 1081
Query: 645 FPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEA 704
+ Y+ L+N ++ + + + + N+ +EI G S+ N+ EA
Sbjct: 1082 LLTPHIYQ-DLENHPSVLKYEKIKG-----VSSNLFFVEHNFPEQEIQ-EGKSHQNQHEA 1134
Query: 705 MNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQ 764
++ P QI ++T Y GQ + M + GV V VD +Q
Sbjct: 1135 HFVVELCKYFLCQEYLPSQITILTTYTGQ------LFCLRKLMPAKTFAGVRVHVVDKYQ 1188
Query: 765 GREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLL 824
G E D I+LS VR+N+ +GFL R+ VAL+RAK G+ +GN + L++ LWS ++
Sbjct: 1189 GEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIH 1248
Query: 825 HFRE 828
RE
Sbjct: 1249 TLRE 1252
>CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1553
Score = 114 bits (284), Expect = 1e-24
Identities = 162/608 (26%), Positives = 245/608 (39%), Gaps = 103/608 (16%)
Query: 374 SGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQ-RPLSLIQGPPGT 432
SG +K G++ D P + P LN+ Q V+ +L PL + P G
Sbjct: 969 SGISEHKTSGKKSEDTPTQFYFPST---PEPLALNKYQCEYVQMLLDGNPLIIGSSPFGC 1025
Query: 433 GKT---VTSATIVYHLSKIHKQRVL----------------VCA---------------- 457
GK+ +T+A +Y L K KQ ++ VC
Sbjct: 1026 GKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVS 1085
Query: 458 -------PSNVAVD----HLAAKLH---SMG-LKVVRLTAKSREDVESSVSELALHNLVS 502
PSN D +L KL +MG + + LT VS + ++LV+
Sbjct: 1086 EKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIKNDLVN 1145
Query: 503 RSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGA-GDKRLD 561
+ V+ +I K D++ T A G +
Sbjct: 1146 PMLFGDHIAQIYDKLSADFSRAPHAQTLVEAF-----FMIYKPDLVMVTADSAKGLLNIL 1200
Query: 562 YKFRTVLIDESTQASEPECLIPIVKGAKQVV--LVGDHQQLGPVI---LDRKAGDAGLKQ 616
V IDE++Q +E L+ ++K L+GD QL P L+ K D G+
Sbjct: 1201 RDVCAVQIDEASQLAECT-LLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGN 1259
Query: 617 SLFERLISLGHIPI-RLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFP--- 672
++ ER I P+ L YR +P+ +E S +FY+G+L +GV+ +ARS F
Sbjct: 1260 TM-ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVS----ELARSDFMTKR 1314
Query: 673 ---WPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDG---VKPEQIGV 726
WP PMMF N G G TS N E +I+ L D V P IGV
Sbjct: 1315 DDFWPNPKFPMMFVNNTGASTKMGTSTS--NSSEKSIVGEIVQNLINDPRNPVNPSDIGV 1372
Query: 727 ITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGF 786
I+ Y Q + + ++++ GS GV+ +VDAFQG EK+ II+ NER + F
Sbjct: 1373 ISFYSAQTSILTEHLR--GS-------GVKCGTVDAFQGSEKEIIIMCST--NERIS-DF 1420
Query: 787 LSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEG--FLDNLQLCT 844
+ RLNVA++RAK II+G+ L R + WS ++ + G LV + N +
Sbjct: 1421 MQLSNRLNVAMSRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNK 1480
Query: 845 VQLTKPSRAPRKAPSNNSSYTQYAGQ-RDFDTQSLVSFGGQNVVEKSFIPNTDLSSLLNQ 903
V L+ S +Y Q + QS +G Q V S P +
Sbjct: 1481 VSLSSYPLISTSRQSKQQRANEYNSQHKHVKRQSNNDYGSQRSVTNSLNP-----EFVGF 1535
Query: 904 QYWNGQSF 911
Q W+ +++
Sbjct: 1536 QKWDDETY 1543
>CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1551
Score = 113 bits (282), Expect = 2e-24
Identities = 160/590 (27%), Positives = 238/590 (40%), Gaps = 98/590 (16%)
Query: 374 SGFLYYKILGQEVPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQ-RPLSLIQGPPGT 432
SG +K G++ D P + P LN+ Q V+ +L PL + P G
Sbjct: 969 SGISEHKTSGKKSEDTPTQFYFPST---PEPLALNKYQCEYVQMLLDGNPLIIGSSPFGC 1025
Query: 433 GKT---VTSATIVYHLSKIHKQRVL----------------VCA---------------- 457
GK+ +T+A +Y L K KQ ++ VC
Sbjct: 1026 GKSMTIITAALELYKLKKNRKQLLITQSNYASVNLIDIAQRVCLSGDDDLKDLKFVRFVS 1085
Query: 458 -------PSNVAVD----HLAAKLH---SMG-LKVVRLTAKSREDVESSVSELALHNLVS 502
PSN D +L KL +MG + + LT VS + ++LV+
Sbjct: 1086 EKNWNELPSNCRTDSDMPYLMNKLFKDWAMGRIDLTNLTCLKTHHYVQMVSHIIKNDLVN 1145
Query: 503 RSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGA-GDKRLD 561
+ V+ +I K D++ T A G +
Sbjct: 1146 PMLFGDHIAQIYDKLSADFSRAPHAQTLVEAF-----FMIYKPDLVMVTADSAKGLLNIL 1200
Query: 562 YKFRTVLIDESTQASEPECLIPIVKGAKQVV--LVGDHQQLGPVI---LDRKAGDAGLKQ 616
V IDE++Q +E L+ ++K L+GD QL P L+ K D G+
Sbjct: 1201 RDVCAVQIDEASQLAECT-LLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGN 1259
Query: 617 SLFERLISLGHIPI-RLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFP--- 672
++ ER I P+ L YR +P+ +E S +FY+G+L +GV+ +ARS F
Sbjct: 1260 TM-ERAIKEKMFPVCTLRNVYRCHPKTTELLSELFYDGALVSGVS----ELARSDFMTKR 1314
Query: 673 ---WPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDG---VKPEQIGV 726
WP PMMF N G G TS N E +I+ L D V P IGV
Sbjct: 1315 DDFWPNPKFPMMFVNNTGASTKMGTSTS--NSSEKSIVGEIVQNLINDPRNPVNPSDIGV 1372
Query: 727 ITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGF 786
I+ Y Q + + ++++ GS GV+ +VDAFQG EK+ II+ NER + F
Sbjct: 1373 ISFYSAQTSILTEHLR--GS-------GVKCGTVDAFQGSEKEIIIMCST--NERIS-DF 1420
Query: 787 LSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLLLHFREKGCLVEG--FLDNLQLCT 844
+ RLNVA++RAK II+G+ L R + WS ++ + G LV + N +
Sbjct: 1421 MQLSNRLNVAMSRAKQVTIIIGHLDGLRRANYWSTIVNKIEQNGNLVNANDWYQNQRRNK 1480
Query: 845 VQLTKPSRAPRKAPSNNSSYTQYAGQ-RDFDTQSLVSFGGQNVVEKSFIP 893
V L+ S +Y Q + QS +G Q V S P
Sbjct: 1481 VSLSSYPLISTSRQSKQQRANEYNSQHKHVKRQSNNDYGSQRSVTNSLNP 1530
>CE24674 [L] KOG1806 DEAD box containing helicases
Length = 1212
Score = 110 bits (274), Expect = 1e-23
Identities = 82/287 (28%), Positives = 146/287 (50%), Gaps = 20/287 (6%)
Query: 540 TIIQKADVICCTCVGAGDKR-----LDYKFRTVLIDESTQASEPECLIPIV--------K 586
+++++A +I TC A +R L +++ ++++E+ Q E E IP++
Sbjct: 709 SLVKEAKIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHN 768
Query: 587 GAKQVVLVGDHQQLGPVILDRKAGD-AGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEF 645
K+ +++GDH QL PV+ ++ + ++QSLF RL+ L ++L+ Q R Q++E
Sbjct: 769 RLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSVPNVQLDRQGRARAQIAEL 828
Query: 646 PSNMFYE-GSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEA 704
+ G+L + + Q A + F +P I + + +G + S + Y N EA
Sbjct: 829 YQWRYNGLGNLPHVDGLPQFQNANAGFAFPFQFIDIPDFNGHGETQPSPH--FYQNLGEA 886
Query: 705 MNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAFQ 764
+ T + G E+I ++T Y GQ + Q + M +V++VD +Q
Sbjct: 887 EYACALYTYMRILGYPAEKISILTTYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQ 946
Query: 765 GREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPR 811
G++ D+IILS V+ IG + D RRL VAL+RA+ GL +LG +
Sbjct: 947 GQQNDFIILSLVKT---RNIGHIRDVRRLVVALSRARLGLYVLGRSK 990
>CE06677 [L] KOG1807 Helicases
Length = 2219
Score = 110 bits (274), Expect = 1e-23
Identities = 89/317 (28%), Positives = 159/317 (50%), Gaps = 27/317 (8%)
Query: 530 FVKLVRKSEATIIQKADVICCTCVGAGDKRLDYKF---RTVLIDESTQASEPECLIPIVK 586
F + +A I++ +I T G R + R ++++E+ + E + ++
Sbjct: 1193 FKNAQNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGPRILIVEEAAEVLEAHIISAMIS 1252
Query: 587 GAKQVVLVGDHQQLGPVILDRKAGDA-GLKQSLFERLISLGHIPIRLEVQYRMNPQLSEF 645
+ VV++GDH+QL P + G A GL+ S+FERL+ G +L Q+RMN +S+
Sbjct: 1253 TVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERLVERGLPFSQLRQQHRMNLTISDK 1312
Query: 646 PSNMFYEGSLQN----GVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNR 701
+ + ++ + G+ + + +A + F FW++ EE S + S+LN+
Sbjct: 1313 IVKLSFYDNVTDAENVGLYPDVQGMATNLF----------FWSHTSMEE-SPDEVSWLNK 1361
Query: 702 IEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVV-QYMQMNGSMEKSLYMGVEVASV 760
E ++ L K I V+ Y Q+ + +Y + GS S + VE +V
Sbjct: 1362 HEISMTVALVKHLLKQNYTTNDIVVLATYSAQKNLMYREYANVFGSTPDSNVIPVE--TV 1419
Query: 761 DAFQGREKDYIILSCVRAN----ERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRN 816
D+FQG+E+ +I+S VR++ E IGFL+ R+ VALTRA++G+ I+GN + N
Sbjct: 1420 DSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQHGMYIIGNGAYIMNN 1479
Query: 817 S-LWSHLLLHFREKGCL 832
S LW+ ++ + R +
Sbjct: 1480 SELWNKIVNNLRRSNLI 1496
>At4g15570 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 525
Score = 103 bits (257), Expect = 1e-21
Identities = 102/383 (26%), Positives = 167/383 (42%), Gaps = 78/383 (20%)
Query: 442 VYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGL----------KVVRLTAKSREDVESS 491
V + S+ ++ RVLVCAPSN A+D + +L S GL K+VR+ K+ S
Sbjct: 69 VVNASRKYRLRVLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVRIGLKAHH----S 124
Query: 492 VSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADV---I 548
V+ ++L +LV++ S ++ EA I+ + +
Sbjct: 125 VASVSLDHLVAQKRGSAIDKPKQGTTGTDIDS-------IRTAILEEAAIVWGFNFRINV 177
Query: 549 CCTCVGAGDKRL---DYKFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVIL 605
T +G L + F V+IDE+ QA EP LIP+ KQV LVGD +QL ++
Sbjct: 178 FATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATVI 237
Query: 606 DRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNP------------------------- 640
A D+G S+FERL G+ L+ QYRM+P
Sbjct: 238 STVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPELIPISQTKPKIVVSLILTPMIASY 297
Query: 641 -----------QLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTI--PMMFW-ANY 686
Q+ FPS FYEG+L++G IE A++T W + P F+ +
Sbjct: 298 FTLQTIFLTENQIRSFPSKQFYEGALEDGSDIE----AQTTRDWHKYRCFGPFCFFDIHE 353
Query: 687 GREEISGNGTSYLNRIEAMNCEKII----TRLFKDGVKPEQIGVITPYEGQ-RAYVVQYM 741
G+E T ++ + +I ++ + Q+ +I+PY Q + + ++
Sbjct: 354 GKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFK 413
Query: 742 QMNGSMEKSLYMGVEVASVDAFQ 764
+M G+ + + V++ +VD FQ
Sbjct: 414 EMFGTEAEKV---VDINTVDGFQ 433
>Hs14750549 [L] KOG1806 DEAD box containing helicases
Length = 1485
Score = 99.8 bits (247), Expect = 2e-20
Identities = 81/287 (28%), Positives = 137/287 (47%), Gaps = 22/287 (7%)
Query: 536 KSEATIIQKADVICCTCVGAGDKRLD-----YKFRTVLIDESTQASEPECLIPIV----- 585
+S+ ++++A +I TC A KR D +K+ +L++E+ Q E E IP++
Sbjct: 1023 RSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQ 1082
Query: 586 ---KGAKQVVLVGDHQQLGPVILDRKAGD-AGLKQSLFERLISLGHIPIRLEVQYRMNPQ 641
K+ +++GDH QL PVI + + ++QSLF R + +G + L+ Q R
Sbjct: 1083 DGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARAS 1142
Query: 642 LSEFPSNMFYE--GSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYL 699
L N Y+ G+L + + + + A + + I + + G E N Y
Sbjct: 1143 LCNL-YNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESE--PNPYFYQ 1199
Query: 700 NRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVAS 759
N EA + + G ++I ++T Y GQ+ + + + +V +
Sbjct: 1200 NLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTT 1259
Query: 760 VDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLII 806
VD FQG++ DYI+LS VR +G L D RRL VA++RA+ GL I
Sbjct: 1260 VDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1303
>Hs7661884 [A] KOG1804 RNA helicase
Length = 1942
Score = 99.4 bits (246), Expect = 2e-20
Identities = 115/452 (25%), Positives = 176/452 (38%), Gaps = 84/452 (18%)
Query: 407 LNQSQSNAVKHV-----LQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNV 461
LN Q AV + +Q P LI GP GTGKT T A V H+ + + R+L+C SN
Sbjct: 642 LNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNS 701
Query: 462 AV-----DHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXX 516
A D+L + + + L R +V + + SA
Sbjct: 702 AADLYIKDYLHPYVEAGNPQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMP---- 757
Query: 517 XXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYKFRTVLIDESTQAS 576
D K +V + + +C + G F +L+DE+ QA
Sbjct: 758 ------QKEDILKHRVVV-----VTLNTSQYLCQLDLEPGF------FTHILLDEAAQAM 800
Query: 577 EPECLIPIVKGAK--QVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIP----- 629
E E ++P+ + ++VL GDH QL P + A + L SL +RL H P
Sbjct: 801 ECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYE--HYPAEFPC 858
Query: 630 -IRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGR 688
I L YR + + + S +FYEG L +A P P+ F+ G
Sbjct: 859 RILLCENYRSHEAIINYTSELFYEGKL----------MASGKQPAHKDFYPLTFFTARGE 908
Query: 689 EEISGNGTSYLNRIEAMNCEKIITRLFK------DGVKPEQIGVITPYEGQRAYVVQYMQ 742
+ N T++ N E + + L + + IGV+TPY Q +
Sbjct: 909 DVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYAD------QVFR 962
Query: 743 MNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVR---------------------ANER 781
+ + K V V V QG++ + LS VR + E
Sbjct: 963 IRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTED 1022
Query: 782 NTIGFLSDPRRLNVALTRAKYGLIILGNPRAL 813
GFLS+ + LN A+TRA+ + ++G+P AL
Sbjct: 1023 LDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1054
>At2g38770 [L] KOG1806 DEAD box containing helicases
Length = 1444
Score = 99.4 bits (246), Expect = 2e-20
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 28/283 (9%)
Query: 543 QKADVICCTCVGAGDKRLDY-----KFRTVLIDESTQASEPECLIPIV--------KGAK 589
++A ++ TC A KR D+ K+ +L++ES Q E E IP++ K
Sbjct: 1091 KQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLLQRQEDGHARLK 1150
Query: 590 QVVLVGDHQQLGPVILDRKAGD-AGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSN 648
+ +L+GDH QL PV+ + + + QSLF R + LG I L Q R P L++ N
Sbjct: 1151 RCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGRARPSLAKL-YN 1209
Query: 649 MFYEG----SLQNGVTIEQRTIARSTFPWPIHTIPMMFWANY-GREEISGNGTSYLNRIE 703
Y S+ I QR A ++ + + +P +Y GR E + + Y N+ E
Sbjct: 1210 WRYRDLGDLSIVKEAPIFQRANAGFSYEYQLVNVP-----DYEGRGESTPSPWFYQNQGE 1264
Query: 704 AMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAF 763
A + + G +I ++T Y GQ+ + + + +V +VD F
Sbjct: 1265 AEYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYPFIGPPSKVTTVDKF 1324
Query: 764 QGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLII 806
QG++ D+I+LS VR +G L D RRL VA++RA+ GL +
Sbjct: 1325 QGQQNDFILLSLVRT---RFVGHLRDVRRLVVAMSRARLGLYV 1364
>7299528 [L] KOG1806 DEAD box containing helicases
Length = 1170
Score = 99.4 bits (246), Expect = 2e-20
Identities = 78/288 (27%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 536 KSEATIIQKADVICCTCVGAGDKR-----LDYKFRTVLIDESTQASEPECLIPIV----- 585
+S+ ++++A +I TC A KR L +++ +L++ES Q E E IP++
Sbjct: 723 RSKYLLVKEAKIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPL 782
Query: 586 ---KGAKQVVLVGDHQQLGPVILDRKAGD-AGLKQSLFERLISLGHIPIRLEVQYRMNPQ 641
K+ +++GDH QL PVI + + ++QSLF RL+ LG + L+ Q R
Sbjct: 783 DGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLDGQGRARAS 842
Query: 642 LSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANY-GREEISGNGTSYLN 700
+ + + L++ I +R + P +H ++ ++ G E N Y N
Sbjct: 843 ICSLYKWRYKK--LEDLQHIFERDEYKQANPGFVHDYQLINVEDFKGVGESEPNPYFYQN 900
Query: 701 RIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASV 760
EA + + G +I ++T Y GQ+ + + + ++ +V
Sbjct: 901 LAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQKHLIRDVINARCGNNPLIGWPHKITTV 960
Query: 761 DAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILG 808
D +QG++ DYI++S VR +G L D RRL VA++RA+ GL + G
Sbjct: 961 DKYQGQQNDYILISLVRTK---AVGHLRDVRRLVVAMSRARLGLYVFG 1005
>7291108 [L] KOG1805 DNA replication helicase
Length = 1119
Score = 97.1 bits (240), Expect = 1e-19
Identities = 83/267 (31%), Positives = 128/267 (47%), Gaps = 38/267 (14%)
Query: 395 LPKSIFV---PHFTELNQSQSNAVKHVLQRPLSL-IQGPPGTGKTVTSATIVYHLSKIHK 450
LPK I P LN+ Q NA L L I+G PGTGKT T +V L + K
Sbjct: 641 LPKIILTKGAPILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLLGK 700
Query: 451 QRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXX 510
VL+ A ++ AVD+L +L GL ++RL + SR + + E++ L
Sbjct: 701 S-VLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSR--IHKQLEEISEERL---------- 747
Query: 511 XXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYK-FRTVLI 569
TK K V + E + Q + ++ TC+G G + F ++
Sbjct: 748 -----------------TKDCKTVEELEKALGQPS-IVGVTCLGCGHPLFQRRQFDYCIV 789
Query: 570 DESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIP 629
DE+TQ +P L P++ +K VLVGD +QL P++ ++A G ++LF+RL S
Sbjct: 790 DEATQVLQPTVLRPLIHCSK-FVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATA 848
Query: 630 IRLEVQYRMNPQLSEFPSNMFYEGSLQ 656
+ L +QYRMN ++ + + Y G L+
Sbjct: 849 V-LSLQYRMNKTITRLANELTYGGDLK 874
Score = 68.2 bits (165), Expect = 6e-11
Identities = 49/141 (34%), Positives = 72/141 (50%), Gaps = 14/141 (9%)
Query: 696 TSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGV 755
+ Y N EA ++ L K G + +IGVI PY RA V + ++ ++ L
Sbjct: 959 SKYTNYCEAGIVMHLLRYLLKSGYEASRIGVIAPY---RAQVELFKKLASKLDTDL---- 1011
Query: 756 EVASVDAFQGREKDYIILSCVRAN------ERNTIG-FLSDPRRLNVALTRAKYGLIILG 808
E +VD FQGR+K+ II SC + ER+ L D RRL VA+TRAK LI+LG
Sbjct: 1012 ECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLG 1071
Query: 809 NPRALSRNSLWSHLLLHFREK 829
+ + L + + L H ++
Sbjct: 1072 DIKCLEQYGPFRQLFKHIPDR 1092
>CE18803 [L] KOG1803 DNA helicase
Length = 646
Score = 83.2 bits (204), Expect = 2e-15
Identities = 111/438 (25%), Positives = 175/438 (39%), Gaps = 75/438 (17%)
Query: 428 GPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVV-RLTAKSRE 486
G PGTGKT T ++ K+ KQ ++V AP+ ++++ +M + + +L K +
Sbjct: 120 GAPGTGKTYTLTLLISCAVKLKKQ-IVVLAPTFETLENIK----NMATRTMEKLGIKCSD 174
Query: 487 DVESSVSELALHNLVSRSAXXXXXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKAD 546
+V S S+ NL+ + F+ V K EA
Sbjct: 175 NVFMSTSQYI--NLIDTEPLQKEDMIGNVLVVLATIGAD----FLNFVAKQEA------- 221
Query: 547 VICCTCVGAGDKRLDYKFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILD 606
LD F +IDE+ E P V +K V+ GD +L P I +
Sbjct: 222 -------------LDPSF--CIIDEAGLVMASETW-PDVYKSKGFVIAGDPNELFPQIYN 265
Query: 607 RKAGDAG------LKQSLFERLISL---------GHIPIRLEVQYRMNPQLSEFPSNMFY 651
G+ L+Q E +S+ PI L+ QYR N + + + FY
Sbjct: 266 HDNGNGFFNQFCCLEQKRLETQVSILDCINEKTENLSPIILDTQYRSNETIMAWSNACFY 325
Query: 652 EGSLQNGVTIEQRTIARSTFPW----PIHTIPMMFWANYGREEISGNGT----------- 696
++ T+ RS F P+ ++ + +E N T
Sbjct: 326 NPKVKTDFKCGSLTL-RSFFKGSKFNPLFHPFVIVDTSCEKEMEKRNETFEYLVFNNNNE 384
Query: 697 --SYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQMNGSME-KSLYM 753
Y N EA +L K V+ I +ITPY GQ V Q M+ + E +S
Sbjct: 385 NEGYANVAEAKIAMHHYKQLLKLKVQASDIAIITPYRGQSHVVRQMMRKFANEESRSDCF 444
Query: 754 GVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRAL 813
V VD G+E D +I + VR+N + +G DPRRL+V +T+AK + +GN L
Sbjct: 445 DTHVGDVDKIVGKEFDVVIFTMVRSNPKLDMGKAGDPRRLHVIITKAKKHFMFIGNGFLL 504
Query: 814 SRNS------LWSHLLLH 825
+ N+ L+ ++L H
Sbjct: 505 AENNMNHINKLFKYVLFH 522
>CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1106
Score = 77.4 bits (189), Expect = 1e-13
Identities = 67/251 (26%), Positives = 114/251 (44%), Gaps = 23/251 (9%)
Query: 593 LVGDHQQLGPVILDRKAG---DAGLKQSLFERLISLGHIPIRLEVQYRMNPQLSEFPSNM 649
LVGD QL D G D G+ +++ L + YR +P ++ S++
Sbjct: 777 LVGDINQLPAYCDDDLQGLLKDYGIGKTMARASRDKMFPQSILRLVYRCHPTTTKILSDL 836
Query: 650 FYEGSLQNGVTIEQRTIARSTFP--WPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNC 707
FY G L +GV QR P WP + P++ N+ ++ GTS N E
Sbjct: 837 FYNGQLISGVEKNQRDEFMRMRPDIWPNSSFPILV-LNHEKDGYR-MGTSVANNSEKDQV 894
Query: 708 EKIITRLFKD----GVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVDAF 763
+I++ L K G+ IG+I+ Y+ Q + + ++ V+ ++DAF
Sbjct: 895 VRIVSLLTKKVKGYGLSESDIGIISFYKAQTSLLADALKKTD---------VKCGTIDAF 945
Query: 764 QGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILGNPRALSRNSLWSHLL 823
QG E++ +I+ C +N F+ + R+NVA++RA+ II+GN L + W +
Sbjct: 946 QGTEREVMIVCCTN---KNPSLFMQEGTRVNVAMSRARQATIIIGNIAKLKKAKHWDTIA 1002
Query: 824 LHFREKGCLVE 834
+ C +E
Sbjct: 1003 QSAQINKCSME 1013
>ECU09g1800 [L] KOG1805 DNA replication helicase
Length = 934
Score = 69.3 bits (168), Expect = 3e-11
Identities = 71/269 (26%), Positives = 115/269 (42%), Gaps = 58/269 (21%)
Query: 390 EFDVELPKSIFVPHFTELNQSQSNAVKHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKI 448
E V +PK ++ F LN Q +A+ L R +I G PGTGK+ ++ L+ +
Sbjct: 607 EHKVSIPK-VYKEEFLRLNDDQRSALFLSLNCRNYRIIHGMPGTGKSTLICLLIKILAYL 665
Query: 449 HKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXX 508
K+ +L+C +N+A+ ++ KL+ +R+ A +E+V E A
Sbjct: 666 KKKVLLICY-TNLALANITKKLNG-----IRIYAAGKEEVSFKTVEEA------------ 707
Query: 509 XXXXXXXXXXXXXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDK-RLDYKFRTV 567
+ +++ TC D ++ +F
Sbjct: 708 ------------------------------GLFFDRIELVVGTCFSFADPIYVNRQFDFC 737
Query: 568 LIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGH 627
+IDE +Q LIP V +K+ V+VGDH QL P L R + D L SLFE L+ H
Sbjct: 738 VIDEGSQMHLLLTLIP-VSISKKFVIVGDHLQLKP--LSRSSKDLSL--SLFEHLLGEDH 792
Query: 628 IPIRLEVQYRMNPQLSEFPSNMFYEGSLQ 656
+R QYRM ++ + +FY L+
Sbjct: 793 SKLR--TQYRMGSEIMRLSNTLFYGNQLR 819
>7294354 [A] KOG1804 RNA helicase
Length = 2061
Score = 63.9 bits (154), Expect = 1e-09
Identities = 92/440 (20%), Positives = 155/440 (34%), Gaps = 102/440 (23%)
Query: 406 ELNQSQSNAVKHV-----LQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKQRVLVCAPSN 460
+LN Q AV + ++ P L+ GP GTGKT T A + L + ++L+C SN
Sbjct: 805 KLNAKQREAVNAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLTQPEAKILICTHSN 864
Query: 461 VAVD-HLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSAXXXXXXXXXXXXXX 519
A D ++ LH +E + E +
Sbjct: 865 SAADLYIKEYLHPW--------------IEEGLKEATPLRVYYHKRWSATVNGVVQKYCI 910
Query: 520 XXXSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRLDYKFRTVLIDESTQASEPE 579
+ V+ + + ++ + + +G K L F + +DE+ QA E E
Sbjct: 911 TDGVGNFLRPTVEDIMRHRIVVVTLSISMELATLGL-PKGL---FTHIFLDEAAQAMECE 966
Query: 580 CLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLGHIPIRLEVQYRMN 639
++P+ L D ++ I L YR +
Sbjct: 967 AIMPLA-------LANDSTRI-----------------------------ILLCENYRAH 990
Query: 640 PQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYL 699
+ F S +FYE Q+ +A P P+ F+ G + N T++
Sbjct: 991 EAIIRFTSELFYE----------QKLVASGKQPRHDRFYPLTFFTTRGEDVQDKNSTAFY 1040
Query: 700 NRIEAMNCEKIITRLFK------DGVKPEQIGVITPYEGQRAYVVQYMQMNGSMEKSLYM 753
N E + ++ L K + IG++TPY Q ++ + K
Sbjct: 1041 NNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMTPYSDQ------VFRIRSELRKRRMG 1094
Query: 754 GVEVASVDAFQGREKDYIILSCVRANER--------------------NTIGFLSDPRRL 793
G+ V V QG++ + LS VR GFLS+ + L
Sbjct: 1095 GISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTSIGDADADYGFLSNSKLL 1154
Query: 794 NVALTRAKYGLIILGNPRAL 813
N A+TRA+ + ++G+P AL
Sbjct: 1155 NTAITRAQSLVAVVGDPVAL 1174
>CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 602
Score = 57.0 bits (136), Expect = 1e-07
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 23/227 (10%)
Query: 590 QVVLVGDHQQLGPVILDRKAGDAGLKQSLFERLISLG-----HIPIRLEVQYRMNPQLSE 644
+++LVGD QL P D A A LK++ ++L + L +R +++
Sbjct: 342 RIILVGDMHQLPPYTED--ALPAELKRAAVGEPLTLAVKGRRWSSMHLTRVHRCPKMITD 399
Query: 645 FPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMFWANYGREEISGNGTSYLNRIEA 704
+FY +L + R P H P +F NY ++ G S+ N EA
Sbjct: 400 LLGAVFYGNTLTSTRKAVNRVPILEAMELPSHH-PFVF-VNYISQQTQV-GKSFSNENEA 456
Query: 705 MNCEKIITRLFKDGVKPE---QIGVITPYEGQRAYVVQYMQMNGSMEKSLYMGVEVASVD 761
+++T L + + + V+ Y Q +YV + GV V ++D
Sbjct: 457 RYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYVYSIAED----------GVRVNTID 506
Query: 762 AFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKYGLIILG 808
QG+E D I+ R++ FL +P R+NVAL+R+K +++G
Sbjct: 507 GCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSKMATVVIG 553
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,661,907
Number of Sequences: 60738
Number of extensions: 2347933
Number of successful extensions: 6514
Number of sequences better than 1.0e-05: 65
Number of HSP's better than 0.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 6141
Number of HSP's gapped (non-prelim): 135
length of query: 969
length of database: 30,389,216
effective HSP length: 116
effective length of query: 853
effective length of database: 23,343,608
effective search space: 19912097624
effective search space used: 19912097624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)