ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1690 good C KOG1531 Energy production and conversion F0F1-type ATP synthase, gamma subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1690 605201 604335 -289
(289 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR039w [C] KOG1531 F0F1-type ATP synthase gamma subunit 390 e-109
SPBC1734.13 [C] KOG1531 F0F1-type ATP synthase gamma subunit 233 2e-61
Hs4885079 [C] KOG1531 F0F1-type ATP synthase gamma subunit 216 2e-56
7301823 [C] KOG1531 F0F1-type ATP synthase gamma subunit 213 2e-55
CE27514 [C] KOG1531 F0F1-type ATP synthase gamma subunit 189 5e-48
At2g33040 [C] KOG1531 F0F1-type ATP synthase gamma subunit 141 1e-33
CE29133 [C] KOG1531 F0F1-type ATP synthase gamma subunit 135 7e-32
Hs22048588 [C] KOG1531 F0F1-type ATP synthase gamma subunit 132 6e-31
At1g15700 [C] KOG1531 F0F1-type ATP synthase gamma subunit 103 4e-22
At4g04640 [C] KOG1531 F0F1-type ATP synthase gamma subunit 100 2e-21
>YBR039w [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 311
Score = 390 bits (1003), Expect = e-109
Identities = 204/280 (72%), Positives = 235/280 (83%), Gaps = 6/280 (2%)
Query: 15 RNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAET 74
R YATL+E+E RLKSIKNIEKITKTMKIVASTRLSKAE+AK SAK+ A+ FYKNAET
Sbjct: 31 RTYATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAET 90
Query: 75 VPL-----EDAEKKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNADVVAIGDKVKGQ 129
L E K+LI+AITSDKGLCGSIHSQLAKAVR L PNAD+V IGDK+K Q
Sbjct: 91 KNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQPNADIVTIGDKIKMQ 150
Query: 130 LLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEG-GASNYKKVSIFWNDPISSLSFEP 188
LLRT+ +N+K + NG+GK+APTF+E++LIA+K+L A Y K+SIF+NDP+SSLSFEP
Sbjct: 151 LLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEP 210
Query: 189 SNKPVFNAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNAM 248
S KP+FNA IEQSPSF KFEID D NV +DLFE+TL+N++L AMA+GYAAE+SARRNAM
Sbjct: 211 SEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAM 270
Query: 249 DNASKNAGDMINSYSILYNRTRQAVITNELVDIITGASSL 288
DNASKNAGDMIN YSILYNRTRQAVITNELVDIITGASSL
Sbjct: 271 DNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASSL 310
>SPBC1734.13 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 301
Score = 233 bits (595), Expect = 2e-61
Identities = 130/274 (47%), Positives = 185/274 (67%), Gaps = 8/274 (2%)
Query: 18 ATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAETVPL 77
ATL+EIE RLKSIKNIEKITKT+K VA T+L++A+RA ++ +Y +K A T
Sbjct: 32 ATLKEIEQRLKSIKNIEKITKTIKTVAQTKLTRAQRAMEASNKYYRVSDEVFKEAGTKAP 91
Query: 78 EDAEKKDLIIAITSDKGLCGSIHSQLAKAVRLQL---KQTPNADVVAIGDKVKGQLLRTN 134
E E K L++A +SDKGLCG IHS +++ +R +L K N + +G+KV+ QLLR
Sbjct: 92 E--EGKTLMVACSSDKGLCGGIHSSISRLIRRELHDPKTFENTSLCILGEKVRTQLLRFC 149
Query: 135 SDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSNKPVF 194
++ F +G +P+FEE I++ ILE A +Y ++ + +N S++SFE K ++
Sbjct: 150 PESFYLTFAHIGGASPSFEEALQISSNILEH-AKDYDRIVLVYNKFASAVSFETVMKNLY 208
Query: 195 NAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNAMDNASKN 254
AI +SP+ S +E+ + V Q L EF +N I +AMAE + +E+S+RRNAM+NASK+
Sbjct: 209 TTKAINESPNLSAYEVS--DEVHQPLMEFAFANAIFSAMAEAHCSEMSSRRNAMENASKS 266
Query: 255 AGDMINSYSILYNRTRQAVITNELVDIITGASSL 288
AGDMIN +SI YNR RQA ITNEL+DI+TGA+SL
Sbjct: 267 AGDMINKFSIQYNRQRQASITNELIDIVTGANSL 300
>Hs4885079 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 297
Score = 216 bits (551), Expect = 2e-56
Identities = 122/278 (43%), Positives = 184/278 (65%), Gaps = 7/278 (2%)
Query: 15 RNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAET 74
RN ATL++I RLKSIKNI+KITK+MK+VA+ + ++AER A+ Y L A Y+ A+
Sbjct: 23 RNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADI 82
Query: 75 VPLEDAEKKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNAD----VVAIGDKVKGQL 130
ED +KK L+I ++SD+GLCG+IHS +AK ++ ++ A +V IGDK++G L
Sbjct: 83 KGPED-KKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGIL 141
Query: 131 LRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSN 190
RT+SD AF VG++ PTF + S+IA ++L G + + SI +N S +S++
Sbjct: 142 YRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYE-FDEGSIIFNKFRSVISYKTEE 200
Query: 191 KPVFNAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNAMDN 250
KP+F+ + + S S ++ D D +V Q+ E+ L+N I ++ E +E SAR AMDN
Sbjct: 201 KPIFSLNTVASADSMSIYD-DIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDN 259
Query: 251 ASKNAGDMINSYSILYNRTRQAVITNELVDIITGASSL 288
ASKNA +MI+ ++ +NRTRQAVIT EL++II+GA++L
Sbjct: 260 ASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>7301823 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 297
Score = 213 bits (543), Expect = 2e-55
Identities = 116/283 (40%), Positives = 185/283 (64%), Gaps = 3/283 (1%)
Query: 7 ASVVRGTSRNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADA 66
A+++ R ATL+ I RLKS+KNI+KIT++MK+V++ + ++AER +A+ Y +
Sbjct: 16 ATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAERDLKAARPYGIGAQ 75
Query: 67 AFYKNAETVPLEDAEKKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQ-TPNADVVAIGDK 125
F++ E P E AE K L+IA+TSD+GLCG++H+ +A+ +R +L Q N V +GDK
Sbjct: 76 QFFEKTEIQPDEKAEPKKLLIAVTSDRGLCGAVHTGVARLIRGELAQDEANTKVFCVGDK 135
Query: 126 VKGQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLS 185
+ L R N+ N VG+ PTF + S IAN++L+ G +Y + I +N S +S
Sbjct: 136 SRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTG-YDYTEGKIVYNRFKSVVS 194
Query: 186 FEPSNKPVFNAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARR 245
++ S P+F+ + +E+S + ++ D++V + EF+L++ I M EG +E S+R
Sbjct: 195 YQCSTLPIFSGSTVEKSEKLAVYD-SLDSDVVKSYLEFSLASLIFYTMKEGACSEQSSRM 253
Query: 246 NAMDNASKNAGDMINSYSILYNRTRQAVITNELVDIITGASSL 288
AMDNASKNAG+MI+ ++ +NRTRQAVIT EL++II+GA++L
Sbjct: 254 TAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296
>CE27514 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 299
Score = 189 bits (479), Expect = 5e-48
Identities = 108/279 (38%), Positives = 174/279 (61%), Gaps = 9/279 (3%)
Query: 14 SRNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAE 73
+R +ATL++I RLKS+KNI+KITK+MK+VA+ + +KAER A+ Y + F+ N +
Sbjct: 22 ARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNID 81
Query: 74 TVPLEDAEK----KDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNAD--VVAIGDKVK 127
V +E EK K +++ ITSD+GLCG +HS + K + L + + VVAIGDK +
Sbjct: 82 PV-VEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140
Query: 128 GQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFE 187
L R ++++ + N +G+ P+F + S+ A IL+ G +++ +I +N + +S+E
Sbjct: 141 AGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGY-DFETGTILFNRFKTVVSYE 199
Query: 188 PSNKPVFNAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNA 247
S + AI+ + S ++ D++V Q E++L+ I M E +E S+R A
Sbjct: 200 TSKLQILPLEAIKAKEALSTYD-SVDDDVLQSYSEYSLAQLIYYGMKESATSEQSSRMTA 258
Query: 248 MDNASKNAGDMINSYSILYNRTRQAVITNELVDIITGAS 286
MD ASKNAG+MI+ ++ +NRTRQAVIT EL++II+GA+
Sbjct: 259 MDGASKNAGEMIDKLTLAFNRTRQAVITRELIEIISGAA 297
>At2g33040 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 325
Score = 141 bits (355), Expect = 1e-33
Identities = 94/282 (33%), Positives = 159/282 (56%), Gaps = 22/282 (7%)
Query: 23 IETRLKSIKNIEKITKTMKIVASTRLSKAE-RAKNSAKEYALADAAFYKNAETVPLEDAE 81
+ R+KS+KNI+KITK MK+VA+++L + RA+NS + A N P D
Sbjct: 48 VRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLGDN----PSIDV- 102
Query: 82 KKDLIIAITSDKGLCGSIHSQLAKAVRL--QLKQTPNADV--VAIGDKVKGQLLRTNSDN 137
KK +++ ++SDKGLCG I+S + K R +L P +V V +G+K K + R + ++
Sbjct: 103 KKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKND 162
Query: 138 LKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSNKPVFNAA 197
+ + + K + + S++A+ IL+ + + I +N S ++F P+ V +
Sbjct: 163 IVLSVTELNKNPLNYAQVSVLADDILKN--VEFDALRIVYNKFHSVVAFLPTVSTVLSPE 220
Query: 198 AIEQSPSFS-------KFEIDADNN---VSQDLFEFTLSNEILAAMAEGYAAEVSARRNA 247
IE+ +EI+ + Q+L EF S + A+ E +E+ AR +A
Sbjct: 221 IIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEMGARMSA 280
Query: 248 MDNASKNAGDMINSYSILYNRTRQAVITNELVDIITGASSLD 289
MD++S+NAG+M++ ++ YNRTRQA IT EL++II+GAS+L+
Sbjct: 281 MDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 322
>CE29133 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 313
Score = 135 bits (340), Expect = 7e-32
Identities = 81/238 (34%), Positives = 139/238 (58%), Gaps = 9/238 (3%)
Query: 14 SRNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAE 73
+R +ATL++I RLKS+KNI+KITK+MK+VA+ + +KAER A+ Y + F+ N +
Sbjct: 22 ARGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNID 81
Query: 74 TVPLEDAE----KKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNAD--VVAIGDKVK 127
V +E E KK +++ ITSD+GLCG +HS + K + L + + VVAIGDK +
Sbjct: 82 PV-VEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSR 140
Query: 128 GQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFE 187
L R ++++ + N +G+ P+F + S+ A IL+ G +++ +I +N + +S+E
Sbjct: 141 AGLQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSG-YDFETGTILFNRFKTVVSYE 199
Query: 188 PSNKPVFNAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARR 245
S + AI+ + S ++ D++V Q E++L+ I M E +E+ A +
Sbjct: 200 TSKLQILPLEAIKAKEALSTYD-SVDDDVLQSYSEYSLAQLIYYGMKESATSELPASK 256
>Hs22048588 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 232
Score = 132 bits (332), Expect = 6e-31
Identities = 81/204 (39%), Positives = 121/204 (58%), Gaps = 8/204 (3%)
Query: 91 SDKGLCGSIHSQLAKAVRLQLKQTPNAD----VVAIGDKVKGQLLRTNSDNLKFAFNGVG 146
+D+GLCG+IHS +AK ++ ++ A +V IGDK++G L R +SD A V
Sbjct: 32 NDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGVLYRMHSDQFLVALKEVR 91
Query: 147 KEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSNKPVFNAAAIEQSPSFS 206
+ P F S+IA ++L G + + SI +N S +S++ KP+F I + S S
Sbjct: 92 RNPPAFGNVSVIALELLNSGYE-FDEGSIIFNQFKSVISYKTEEKPIFFLNTIASAESMS 150
Query: 207 -KFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNAMDNASKNAGDMINSYSIL 265
+ IDA+ V Q+ E++L+N I ++ E +E SAR AMDN SKNA +MI+ ++
Sbjct: 151 IYYNIDAE--VLQNYQEYSLANSIYYSLKESTTSEQSARMTAMDNTSKNASEMIDKLTLT 208
Query: 266 YNRTRQAVITNELVDIITGASSLD 289
+N TRQAVIT EL +II GA +LD
Sbjct: 209 FNCTRQAVITKELTEIIFGAVALD 232
>At1g15700 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 386
Score = 103 bits (256), Expect = 4e-22
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 54/324 (16%)
Query: 18 ATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYA-LADAAFYKNAETVP 76
A +RE+ R+ S+KN +KIT+ M++VA+ R+ +A+ A + + Y ++
Sbjct: 61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQ 120
Query: 77 LEDAE---------KKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTP----NADVVAIG 123
LED + K+ ++ +T DKGLCG ++ + K L++++ + V+++G
Sbjct: 121 LEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVG 180
Query: 124 DKVKGQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASN---------YKKVS 174
K R + ++ G G PT +E +IA+ + S K VS
Sbjct: 181 KKGNAYFSRRDEFDVDKCIEG-GGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKFVS 239
Query: 175 IFWNDPISSLSFEPSNK----------------PVFNAAAIEQSPSFSKFEIDADNNVSQ 218
+ +DP+ S K +F + + + + +++ +
Sbjct: 240 LVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRLTSKDGKLAVERTKLEVEKPEIS 299
Query: 219 DLFEFT--------------LSNEILAAMAEGYAAEVSARRNAMDNASKNAGDMINSYSI 264
L +F L+++IL A+ E A+E+++R NAM NA+ NA ++ + ++
Sbjct: 300 PLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSNATDNAVELKKNLTM 359
Query: 265 LYNRTRQAVITNELVDIITGASSL 288
YNR RQA IT EL++I+ GA +L
Sbjct: 360 AYNRARQAKITGELLEIVAGAEAL 383
>At4g04640 [C] KOG1531 F0F1-type ATP synthase gamma subunit
Length = 373
Score = 100 bits (250), Expect = 2e-21
Identities = 86/326 (26%), Positives = 150/326 (45%), Gaps = 61/326 (18%)
Query: 18 ATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYA--LADAAFYKNAET- 74
A+LRE+ R+ S+KN +KIT+ MK+VA+ ++ +A+ A + + ++ L + + N +
Sbjct: 51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ 110
Query: 75 -----VPLEDAE--KKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNAD----VVAIG 123
VPL KK ++ +T D+GLCG ++ + K ++K+ V+++G
Sbjct: 111 TDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVG 170
Query: 124 DKVKGQLLRTNSDNL-KFAFNGVGKEAPTFEETSLIANKILEGGASN-YKKVSIFWNDPI 181
K LR + K+ G PT +E +A+ + S KV + + +
Sbjct: 171 KKGNSYFLRRPYIPVDKYLEAGT---LPTAKEAQAVADDVFSLFISEEVDKVELLYTKFV 227
Query: 182 SSLSFEPS----------------------------------------NKPVFNAAAIEQ 201
S + EP + F +
Sbjct: 228 SLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADF 287
Query: 202 SPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNAMDNASKNAGDMINS 261
SP +FE D + L L+++IL A+ E A+E++AR +AM +AS NA D+ S
Sbjct: 288 SPIL-QFEQDPVQ-ILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKS 345
Query: 262 YSILYNRTRQAVITNELVDIITGASS 287
S++YNR RQA IT E+++I+ GA++
Sbjct: 346 LSMVYNRKRQAKITGEILEIVAGANA 371
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.312 0.127 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,268,141
Number of Sequences: 60738
Number of extensions: 546125
Number of successful extensions: 1429
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1395
Number of HSP's gapped (non-prelim): 12
length of query: 289
length of database: 30,389,216
effective HSP length: 105
effective length of query: 184
effective length of database: 24,011,726
effective search space: 4418157584
effective search space used: 4418157584
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)