ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1850 good U KOG1107 Intracellular trafficking, secretion, and vesicular transport Membrane coat complex Retromer, subunit VPS35
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1850 656828 654192 -879
(879 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL154c [U] KOG1107 Membrane coat complex Retromer subunit VPS35 916 0.0
SPCC777.13 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 444 e-124
Hs17999541 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 431 e-120
At2g17790 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 402 e-112
At3g51310 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 389 e-108
7291388 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 375 e-103
CE26372 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 351 3e-96
At1g75850 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 350 4e-96
Hs14767017 [U] KOG1107 Membrane coat complex Retromer subunit VPS35 98 5e-20
>YJL154c [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 944
Score = 916 bits (2368), Expect = 0.0
Identities = 506/980 (51%), Positives = 643/980 (64%), Gaps = 144/980 (14%)
Query: 3 AYSDNMEQAISHIKQQTILMQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYELYIII 62
AY+D+ E AI+ IKQ+T LM R L+Q KLM++L+H S ML ELRNP+LSPK YYELY+II
Sbjct: 2 AYADSPENAIAVIKQRTALMNRCLSQHKLMESLQHTSIMLTELRNPNLSPKKYYELYVII 61
Query: 63 FDSLSILSQYLVENHPTRHHLADLYELVQYTGNILPRLYLMLTVGVSFMQTKDCPAEEVL 122
FDSL+ LS YL+ENHP HHLADLYELVQYTGN++PRLYLM+TVG S++ + P +E+L
Sbjct: 62 FDSLTNLSTYLIENHPQNHHLADLYELVQYTGNVVPRLYLMITVGTSYLTFNEAPKKEIL 121
Query: 123 KDMIEMCRGVQHPIRGLFLRYYLSQRTKQSLTSDISLDKKFDIQFIITNFIEMNKLWVRL 182
KDMIEMCRGVQ+PIRGLFLRYYLSQRTK+ L D D F+ QFI+ NFIEMNKLWVRL
Sbjct: 122 KDMIEMCRGVQNPIRGLFLRYYLSQRTKELLPED---DPSFNSQFIMNNFIEMNKLWVRL 178
Query: 183 QHQGPLRERDLRTKERKELQILIGSNLVRLSQILDDSFALYRDEVLPQILEQVIQCRDVV 242
QHQGPLRER+ RT+ERKELQIL+GS LVRLSQI+DD+F +Y+ ++LP ILEQVIQCRD+V
Sbjct: 179 QHQGPLRERETRTRERKELQILVGSQLVRLSQIIDDNFQMYKQDILPTILEQVIQCRDLV 238
Query: 243 SQTYLLDVICQVFPDEFHLGTLSQLLDTTLKLNPDVVINKVVLSLIARLNGFWDRQ--DD 300
SQ YLLDVICQVF DEFHL TL LL TTL LNPDV INK+VL+L+ RLN + RQ DD
Sbjct: 239 SQEYLLDVICQVFADEFHLKTLDTLLQTTLHLNPDVSINKIVLTLVDRLNDYVTRQLEDD 298
Query: 301 PNAIIQNLNHLKLDSNTDEEEHSADDGESTAEKLDSEPVSRNKFDLFFVFWKYLTKITEE 360
PNA ST LD D+F FW YLT + E
Sbjct: 299 PNAT------------------------STNAYLD--------MDVFGTFWDYLTVLNHE 326
Query: 361 RPDLPLHEIIPLVHSIMLLSLKWYPSNLSNVDILYKFCWEKYQDFG-KDIPEECEQSFKE 419
RPDL L + IPLV S+++LSLKWYP+N N++ L++ +K +D+G K+I E E F
Sbjct: 327 RPDLSLQQFIPLVESVIVLSLKWYPNNFDNLNKLFELVLQKTKDYGQKNISLESEHLFLV 386
Query: 420 LFIY-----------------PLSTDN--FYEIITTCDSFQKLLSVQSITLQKSIINSIL 460
L + P+++ +++I+ C +++ +L++QSI+LQK ++N I+
Sbjct: 387 LLSFQNSKLQLTSSTTAPPNSPVTSKKHFIFQLISQCQAYKNILALQSISLQKKVVNEII 446
Query: 461 DKMVETNTK---------------------ITDKQHLDKLGAICEPIISVPNNKPKTSIL 499
D +++ + I DK + +L +ICEP+I + P
Sbjct: 447 DILMDREVEEMADNDSESKLHPPGHSAYLVIEDKLQVQRLLSICEPLIISRSGPPAN--- 503
Query: 500 TVSDDLDSELTFFN-----------PEQEKLAKLVHLIYHK-------------NVDINT 535
S D + + FFN P QEKLA L+H I + +++
Sbjct: 504 VASSDTNVDEVFFNRHDEEESWILDPIQEKLAHLIHWIMNTTSRKQTMKNKIQFSLEAQL 563
Query: 536 ELLLICKKWYYNGGKQLRFTYPALITAFWKLIRKLH----FKSLKRPERK---EDYNAKI 588
E+LL+ K + GG +++T+PA+IT FWKL+RK + KRP+ K Y+ +
Sbjct: 564 EILLLIKSSFIKGGINVKYTFPAIITNFWKLMRKCRMIQEYLLKKRPDNKTLLSHYSNLL 623
Query: 589 KQLFKYVSRCNTDLFNVCGLSISDLIFKLNLQTAAIADQLTLSEISYDFFSQAFTIFEES 648
KQ+FK+VSRC D+FN C S +DLI KLNLQ A +ADQL L+EISYDFFSQAFTIFEES
Sbjct: 624 KQMFKFVSRCINDIFNSCNNSCTDLILKLNLQCAILADQLQLNEISYDFFSQAFTIFEES 683
Query: 649 LSDSKVQFQALVNMAQVLQKTRSLYNDEGYYDTLITRCTLHGSKLLKKTDQCRAVYLCSH 708
LSDSK Q QAL+ +AQ LQKTRSLY E YYD+LI RCTLHGSKLLKK DQCRAVYLCSH
Sbjct: 684 LSDSKTQLQALIYIAQSLQKTRSLYK-EAYYDSLIVRCTLHGSKLLKKQDQCRAVYLCSH 742
Query: 709 LWWATELTLIGEEEGVTKNFFREGKRVLECLQRSLRVADSIMDNVQSCQLMVEILGSCCY 768
LWWATE++ IGEEEG+T NF+R+GKRVLECLQRSLRVADSIMDN QSC+LMVEIL C Y
Sbjct: 743 LWWATEISNIGEEEGITDNFYRDGKRVLECLQRSLRVADSIMDNEQSCELMVEILNRCLY 802
Query: 769 YFIHGDESETHVGVKYIAGLVELIQANLKGLQLEE------SGEVQD------------- 809
YFIHGDESETH+ +KYI GL+ELI+ NLK L+LE+ + + D
Sbjct: 803 YFIHGDESETHISIKYINGLIELIKTNLKSLKLEDNSASMITNSISDLHITGENNVKASS 862
Query: 810 -------FTAPSQTIVIGCDGSYI-CKTLSSSTCMVSSKIPNVR----IPDLIAVPVSYF 857
T + IG DG+YI TL+ S+ ++ + + L +P+ +F
Sbjct: 863 NADDGSVITDKESNVAIGSDGTYIQLNTLNGSSTLIRGVVATASGSKLLHQLKYIPIHHF 922
Query: 858 ERTLEYIENQKQVDYRFNAI 877
RT EYIE+Q++VD RF I
Sbjct: 923 RRTCEYIESQREVDDRFKVI 942
>SPCC777.13 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 785
Score = 444 bits (1141), Expect = e-124
Identities = 272/785 (34%), Positives = 439/785 (55%), Gaps = 71/785 (9%)
Query: 45 LRNPDLSPKLYYELYIIIFDSLSILSQYLVENHPT-RHHLADLYELVQYTGNILPRLYLM 103
+RN L+PK YYELY+ +SL +L L+E H H+L DLYELVQY G+I+PRLYLM
Sbjct: 1 MRNSALTPKQYYELYMFNMESLRLLGGTLLETHLNGTHNLMDLYELVQYAGSIVPRLYLM 60
Query: 104 LTVGVSFMQTKDCPAEEVLKDMIEMCRGVQHPIRGLFLRYYLSQRTKQSLT--SDISLDK 161
+TVG ++++T + E++ D+++MCRGVQHP+RGLFLR+YL +T++ L S+ D
Sbjct: 61 ITVGSAYLETPNALVREIMNDLLDMCRGVQHPLRGLFLRHYLLTQTRKGLPLGSEDEEDA 120
Query: 162 K------FDIQFIITNFIEMNKLWVRLQHQGPLRERDLRTKERKELQILIGSNLVRLSQI 215
++F++ NF EMNKLWVR+QH GP++E RT+ER EL++L+G NLVRLSQ
Sbjct: 121 SRKGTVLDSVKFLVINFTEMNKLWVRIQHLGPIKEFSKRTQERNELKVLVGLNLVRLSQ- 179
Query: 216 LDDSFALYRDEVLPQILEQVIQCRDVVSQTYLLDVICQVFPDEFHLGTLSQLLDTTLKLN 275
L+ YRD VLP I+EQ+I+CRD ++Q YL++VICQ F D HL TL T +KL+
Sbjct: 180 LNLDIDTYRDHVLPAIIEQIIECRDSLAQEYLVEVICQAFSDNMHLQTLDTYFGTVIKLS 239
Query: 276 PDVVINKVVLSLIARLNGFWDR--------QDDPNAIIQNLNHLKLDSNTDEEEHSADDG 327
P V + ++V++++ RL + R +D+ + + L +K+ +EE D+
Sbjct: 240 PSVNVTQLVVAMLNRLTDYVQREYESDSSNEDESETVTEKLGDIKI----NEEVQQKDEQ 295
Query: 328 ESTAEKLDSEPVSRNKFDLFFVFWKYLTKITEERPDLPLHEIIPLVHSIMLLSLKWYPSN 387
E +K V ++ + V W ++ ++ + R LPL I+ ++ SI+ L+ YP
Sbjct: 296 ECPGDK-----VIPPEYAIQEVLWSHVVEVIQSRSGLPLDCIVSILSSILNFFLRCYPYK 350
Query: 388 LSNVDILYKFCWEKY--QDFGKDIPEE--CEQSFKELFIYPLSTDNFYEIITTCDSFQKL 443
D ++++ E Q + E ++S + + PL+ + +F +
Sbjct: 351 PQYADRVFQYINEHIINQPSLRSALHERPLQKSLCAILLLPLTYFPSFSYCLELQNFLPV 410
Query: 444 LSVQSITLQKSIINSILDKMVETNTKITDKQHLDKLGAICEPIISVPNNKPKTSILTVSD 503
+ Q L+ I I+ K++E +++ +L II K + D
Sbjct: 411 FNAQDPNLRYDIARMIVQKIIEKGHSLSELTEAQELLGFVSVIIE------KKGV----D 460
Query: 504 DLDSELTFFNPEQEKLAKLVHLIYHKNVDINTELLLICKKWYYNGGKQLRFTYPALITAF 563
LD + + +A +VH + + + I E+L K + G+ +++ P ++
Sbjct: 461 SLD--------DLQNVALMVHYLNNDDPQIQIEILRSLKDTFIKAGENVKYLLPVVVNRC 512
Query: 564 WKLIRKLH-FKSLKRPERKEDYNAKIKQLFKYVSRCNTDLFNVCGLSISDLIFKLNLQTA 622
L R FK + D+ K++ L+++V+ C L+ G S+ +L L L A
Sbjct: 513 IFLARNFRIFKCM-------DWAEKVRLLWEFVNTCINVLYK-NGDSL-ELCLALYLSAA 563
Query: 623 AIADQLTLSEISYDFFSQAFTIFEESLSDSKVQFQALVNMAQVLQKTRSLYNDEGYYDTL 682
+ADQ + +Y+FF+QAF+I+EES+ DS++Q+Q L+ + LQKTR+ D+ YDTL
Sbjct: 564 EMADQENYPDFAYEFFTQAFSIYEESVLDSELQYQQLLMIIGKLQKTRNFSVDD--YDTL 621
Query: 683 ITRCTLHGSKLLKKTDQCRAVYLCSHLWWATELTLIGEEEGVTKNFFREGKRVLECLQRS 742
IT+CTL+ SKLLKK DQC +YL SHLWW G F++ KRVLECLQ+S
Sbjct: 622 ITKCTLYASKLLKKPDQCCGIYLASHLWWQV-------ASGEDSRPFQDPKRVLECLQKS 674
Query: 743 LRVADSIMDNVQSCQLMVEILGSCCYYFIHGDESETHVGVKYIAGLVELIQANLKGLQLE 802
L++AD+ MD + S +L + IL YY+ D+ + K+I+GL++L + N++ + +
Sbjct: 675 LKIADACMDQLTSLKLFINILERYFYYY---DQHCESIIAKHISGLIDLTEQNMRSILIS 731
Query: 803 ESGEV 807
++
Sbjct: 732 SPADL 736
>Hs17999541 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 796
Score = 431 bits (1107), Expect = e-120
Identities = 275/813 (33%), Positives = 437/813 (52%), Gaps = 78/813 (9%)
Query: 8 MEQAISHIKQQTILMQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYELYIIIFDSLS 67
+++AI +K Q+ M+R L + KLMDALKH S+ML ELR LSPK YYELY+ I D L
Sbjct: 16 LDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELH 75
Query: 68 ILSQYLVENHPTRHHLADLYELVQYTGNILPRLYLMLTVGVSFMQTKDCPAEEVLKDMIE 127
L YL + +ADLYELVQY GNI+PRLYL++TVGV ++++ +++LKD++E
Sbjct: 76 YLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVE 135
Query: 128 MCRGVQHPIRGLFLRYYLSQRTKQSL-------TSDISLDKKFDIQFIITNFIEMNKLWV 180
MCRGVQHP+RGLFLR YL Q T+ L + + D + F++ NF EMNKLWV
Sbjct: 136 MCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWV 195
Query: 181 RLQHQGPLRERDLRTKERKELQILIGSNLVRLSQILDDSFALYRDEVLPQILEQVIQCRD 240
R+QHQG R+R+ R +ER+EL+IL+G+NLVRLSQ+ + Y+ VL ILEQV+ CRD
Sbjct: 196 RMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRD 255
Query: 241 VVSQTYLLDVICQVFPDEFHLGTLSQLLDTTLKLNPDVVINKVVLSLIARLNGFWDRQDD 300
++Q YL++ I QVFPDEFHL TL+ L +L+ +V + ++++LI RL F R+D
Sbjct: 256 ALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDG 315
Query: 301 PNAIIQNLNHLKLDSNTDEEEHSADDGESTAEKLDSEPVSRNKFDLFFVFWKYLTKITEE 360
P AD LF +F + + + +
Sbjct: 316 PGI-------------------PAD------------------IKLFDIFSQQVATVIQS 338
Query: 361 RPDLPLHEIIPLVHSIMLLSLKWYPSNLSNVDILYKFCWEKYQDFGKDIPEECEQSFKEL 420
R D+P +++ L S++ L++K YP + VD + + E + + KEL
Sbjct: 339 RQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKEL 398
Query: 421 F-IYPLSTDNFYEIITT--CDSFQKLLSVQSITLQKSIINSILDKMVETNTKITDKQHLD 477
+ + D + I+T F L +KS+ +L +++ NT+I + +D
Sbjct: 399 TRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVD 458
Query: 478 KLGAICEPIISVPNNKPKTSILTVSDDLDSELTFFNPEQEKLAKLVHLIYHKNVDINTEL 537
+ + +I ++P +D D E F EQ + + +HL+ ++ D +
Sbjct: 459 SIMNLVSTLIQDQPDQP-------VEDPDPE--DFADEQSLVGRFIHLLRSEDPDQQYLI 509
Query: 538 LLICKKWYYNGGKQ-LRFTYPALITAFWKLIRKLHFKSLKRPERKEDYNAKIKQLFKYVS 596
L +K + GG Q +RFT P L+ A ++L F+ + + + + K +++F +
Sbjct: 510 LNTARKHFGAGGNQRIRFTLPPLVFAAYQLA----FRYKENSKVDDKWEKKCQKIFSFAH 565
Query: 597 RCNTDLFNVCGLSISDLIFKLNLQTAAIADQLTLSE---ISYDFFSQAFTIFEESLSDSK 653
+ + L +++L +L LQ A A ++ ++Y+F SQAF+++E+ +SDSK
Sbjct: 566 QTISALIKA---ELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSK 622
Query: 654 VQFQALVNMAQVLQKTRSLYNDEGYYDTLITRCTLHGSKLLKKTDQCRAVYLCSHLWWAT 713
Q A+ + ++ + E ++ L T+C L SKLLKK DQ RAV C+HL+W+
Sbjct: 623 AQLAAITLIIGTFERMKCF--SEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSG 680
Query: 714 ELTLIGEEEGVTKNFFREGKRVLECLQRSLRVADSIMDNVQSCQLMVEILGSCCYYFIHG 773
T EE GKRV+ECL+++L++A+ MD QL +EIL Y++
Sbjct: 681 RNTDKNGEE------LHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFY--- 731
Query: 774 DESETHVGVKYIAGLVELIQANLKGLQLEESGE 806
++ V ++ + L++ I+ +L L+ E E
Sbjct: 732 EKENDAVTIQVLNQLIQKIREDLPNLESSEETE 764
>At2g17790 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 830
Score = 402 bits (1034), Expect = e-112
Identities = 278/849 (32%), Positives = 440/849 (51%), Gaps = 126/849 (14%)
Query: 16 KQQTILMQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYELYIIIFDSLSILSQYLVE 75
KQ MQR++ L DALK+ + ML ELR LSP YY+LY+ FD L L + +E
Sbjct: 21 KQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHKYYDLYMRAFDELRKLEIFFME 80
Query: 76 NHPTRHHLADLYELVQYTGNILPRLYLMLTVGVSFMQTKDCPAEEVLKDMIEMCRGVQHP 135
+ +LYELVQ+ GNILPRLYL+ T G +++TK+ PA+E+LKD++EMCRG+QHP
Sbjct: 81 ETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKEAPAKEILKDLVEMCRGIQHP 140
Query: 136 IRGLFLRYYLSQRTKQSLTSDISLDKKFD-------IQFIITNFIEMNKLWVRLQHQGPL 188
+RGLFLR YL+Q ++ L DI + + D ++F++ NF EMNKLWVR+QHQGP
Sbjct: 141 LRGLFLRSYLAQISRDKL-PDIGSEYEGDADTVIDAVEFVLLNFTEMNKLWVRMQHQGPA 199
Query: 189 RERDLRTKERKELQILIGSNLVRLSQILDDSFALYRDEVLPQILEQVIQCRDVVSQTYLL 248
RE++ R KER EL+ L+G NL LSQ+ +YRD VLP++LEQ++ CRD ++Q YL+
Sbjct: 200 REKERREKERGELRDLVGKNLHVLSQLEGVDLDMYRDTVLPRVLEQIVNCRDEIAQYYLI 259
Query: 249 DVICQVFPDEFHLGTLSQLLDTTLKLNPDVVINKVVLSLIARLNGFWDRQDDPNAIIQNL 308
D I QVFPDE+HL TL LL +L V I V+ L+ RL+ +
Sbjct: 260 DCIIQVFPDEYHLQTLDVLLGACPQLQASVDIMTVLSRLMERLSNY-------------- 305
Query: 309 NHLKLDSNTDEEEHSADDGESTAEKLDSEPVSRNKFDLFFVFWKYLTKITEERPDLPLHE 368
+A + E L E S+ + K+ E + D+P+
Sbjct: 306 --------------AALNAEVLPYFLQVEAFSKLN--------NAIGKVIEAQEDMPILS 343
Query: 369 IIPLVHSIMLLSLKWYPSNLSNVD----------------------------------IL 394
+ L S++ +L +P L D ++
Sbjct: 344 AVTLYSSLLKFTLHVHPDRLDYADQVLISGSSLFIILVADIGSGIYVLFCYIKLPTTYLI 403
Query: 395 YKFCWEKY-------QDFGKDIPEECEQSFKELFIYPLSTDNFYEIITTCDSFQKLLSVQ 447
FCW + Q GK ++ + + + + + + +++T L V+
Sbjct: 404 RIFCWNRVHWGSCVKQLSGKGKIDDTRATKELVSLLSAPLEKYNDVVTALKLTNYPLVVE 463
Query: 448 SITLQKSIINS--ILDKMVETNTKITDKQHLDKLGAICEPIISVPNNKPKTSILTVSDDL 505
+ + I + I+ +++ NT IT +K+ A+ E I + N+ + L V +D
Sbjct: 464 YLDTETKRIMATVIVRSIMKNNTLITT---AEKVEALFELIKGIINDLDEPQGLEVDED- 519
Query: 506 DSELTFFNPEQEKLAKLVHLIYHKNVDINTELLLICKKWYYNGG-KQLRFTYPALITAFW 564
F EQ +A L+H++Y+ + + +++ + KK + GG K+L+FT P L+ +
Sbjct: 520 -----DFQEEQNSVALLIHMLYNDDPEEMFKIVNVLKKHFLTGGPKRLKFTIPPLVVSTL 574
Query: 565 KLIRKLHFKSLKRPERKEDYNAKIKQLFKYVSRCNTDLFNVCGLSISDLIFKLNLQTAAI 624
KLIR+L + P KE + ++F+++++ L NV DL F+L LQ A
Sbjct: 575 KLIRRLPVEG-DNPFGKE-ASVTATKIFQFLNQIIEALPNV---PSPDLAFRLYLQCAEA 629
Query: 625 ADQLTLSEISYDFFSQAFTIFEESLSDSKVQFQALVNMAQVLQKTRSLYNDEGYYDTLIT 684
AD+ I+Y+FF+QA+ ++EE +SDSK Q AL + LQ+ + ++ E DTL
Sbjct: 630 ADKCDEEPIAYEFFTQAYILYEEEISDSKAQVTALQLIIGTLQRMQ-VFGVEN-RDTLTH 687
Query: 685 RCTLHGSKLLKKTDQCRAVYLCSHLWWATELTLIGEEEGVTKNFFREGKRVLECLQRSLR 744
+ T + +KLLKK DQCRAVY CSHL+W + + ++G+RVL CL+R+L+
Sbjct: 688 KATGYAAKLLKKPDQCRAVYACSHLFWLED-----------RETIQDGERVLLCLKRALK 736
Query: 745 VADSIMD-------NVQSCQLMVEILGSCCYYFIHGDESETHVGVKYIAGLVELIQANLK 797
+A+S + S L +EIL Y++ ++ + V+ + L++LI+ N +
Sbjct: 737 IANSAQQVANTARGSTGSVTLFIEILNKYLYFY---EKGVPQITVESVESLIKLIK-NEE 792
Query: 798 GLQLEESGE 806
+ + S E
Sbjct: 793 SMPSDPSAE 801
>At3g51310 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 789
Score = 389 bits (1000), Expect = e-108
Identities = 269/800 (33%), Positives = 412/800 (50%), Gaps = 88/800 (11%)
Query: 11 AISHIKQQTILMQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYELYIIIFD----SL 66
AI+ +KQ MQR++ L DALK + ML ELR LSP YYEL L
Sbjct: 13 AIAAVKQNAFYMQRAIDSNNLKDALKFSAQMLSELRTSKLSPHKYYELCESTRSLPALPL 72
Query: 67 SILSQYLVENHPTRHHLADLYELVQYTGNILPRLYLMLTVGVSFMQTKDCPAEEVLKDMI 126
+ + E +A+LYELVQ+ GNILPRLYL+ T+G ++++KD A ++LKD++
Sbjct: 73 FVALIFFKEETGRGCSIAELYELVQHAGNILPRLYLLCTIGSVYIKSKDVTATDILKDLV 132
Query: 127 EMCRGVQHPIRGLFLRYYLSQRTKQSLTSDISLDKKFD-------IQFIITNFIEMNKLW 179
EMCR VQHP+RGLFLR YL+Q T+ L S I D + D ++F++ NF EMNKLW
Sbjct: 133 EMCRAVQHPLRGLFLRSYLAQVTRDKLPS-IGSDLEGDGDAHMNALEFVLQNFTEMNKLW 191
Query: 180 VRLQHQGPLRERDLRTKERKELQILIGSNLVRLSQILDDSFALYRDEVLPQILEQVIQCR 239
VR+QHQGP RE++ R KER EL+ L+G NL LSQ+ +YRD VLP+ILEQV+ C+
Sbjct: 192 VRMQHQGPSREKEKREKERNELRDLVGKNLHVLSQLEGVDLGIYRDTVLPRILEQVVNCK 251
Query: 240 DVVSQTYLLDVICQVFPDEFHLGTLSQLLDTTLKLNPDVVINKVVLSLIARLNGFWDRQD 299
D ++Q YL+D I QVFPD+FHL TL LL +L P V I V+ L+ RL+ +
Sbjct: 252 DELAQCYLMDCIIQVFPDDFHLQTLDVLLGACPQLQPSVDIKTVLSGLMERLSNY----- 306
Query: 300 DPNAIIQNLNHLKLDSNTDEEEHSADDGESTAEKLDSEPVSRNKFDLFFVFWKYLTKITE 359
+A E+ L E S+ + + K+ E
Sbjct: 307 -----------------------AASSVEALPNFLQVEAFSKLNY--------AIGKVVE 335
Query: 360 ERPDLPLHEIIPLVHSIMLLSLKWYPSNLSNVDILYKFCWEKYQDFGKDIPEECEQSFKE 419
+ DLP + L ++ +L Y L VD + C + GK ++ +
Sbjct: 336 AQADLPAAASVTLYLFLLKFTLHVYSDRLDYVDQVLGSCVTQLSATGKLCDDKAAKQIVA 395
Query: 420 LFIYPLSTDNFYEIITTCDSFQKLLSVQSITLQKSIINSILDKMVETNTKITDKQHLDKL 479
PL N I ++ ++ K++ ++ + + NT I +D L
Sbjct: 396 FLSAPLEKYNNVVTILKLTNYPLVMEYLDRETNKAMAIILVQSVFKNNTHIATADEVDAL 455
Query: 480 GAICEPIISVPNNKPKTSILTVSDDLDSELTFFNPEQEKLAKLVHLIYHKNVDINTELLL 539
+ + ++ K T+ D++D E F EQ +A+LV+ +Y +D E+
Sbjct: 456 FELAKGLM-------KDFDGTIDDEIDEE--DFQEEQNLVARLVNKLY---IDDPEEM-- 501
Query: 540 ICKKWYYNGGKQLRFTYPALITAFWKLIRKLHFKSLKRPERKEDYNAKIKQLFKYVSRCN 599
K G K+L T P L+ + KLIR+L + +D +A K++ + +S +
Sbjct: 502 -SKHIVAGGPKRLPLTIPPLVFSALKLIRRL--RGGDENPFGDDASATPKRILQLLSEAS 558
Query: 600 TDLFNVCGLSISDLIFKLNLQTAAIADQLTLSEISYDFFSQAFTIFEESLSDSKVQFQAL 659
T + + +S DL +L LQ A A+ L ++Y+FF++A+ ++EE +SDSK Q AL
Sbjct: 559 T-VEVLSDVSAPDLALRLYLQCAQAANNCELETVAYEFFTKAYLLYEEEISDSKAQVTAL 617
Query: 660 VNMAQVLQKTRSLYNDEGYYDTLITRCTLHGSKLLKKTDQCRAVYLCSHLWWATELTLIG 719
+ LQ+ R ++N E DTL + T + ++LL+K DQCRAVY C+HL+WA E +
Sbjct: 618 RLIIGTLQRMR-VFNVEN-RDTLTHKATGYSARLLRKPDQCRAVYECAHLFWADECENL- 674
Query: 720 EEEGVTKNFFREGKRVLECLQRSLRVADSIM---------DNVQSCQLMVEILGSCCYYF 770
++G+RV+ CL+R+ R+AD++ + S L VE+L Y+
Sbjct: 675 ----------KDGERVVLCLKRAQRIADAVQQMANASRGTSSTGSVSLYVELLNKYLYFL 724
Query: 771 IHGDESETHVGVKYIAGLVE 790
G++ T +K +A L++
Sbjct: 725 EKGNQQVTGDTIKSLAELIK 744
>7291388 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 770
Score = 375 bits (964), Expect = e-103
Identities = 258/806 (32%), Positives = 401/806 (49%), Gaps = 94/806 (11%)
Query: 8 MEQAISHIKQQTILMQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYELYIIIFDSLS 67
+ +AI ++Q M L +++++D+LK S ML ELR LSPK YYELY+ + + L
Sbjct: 12 LAEAIGLARKQAFQMNHFLDKERMLDSLKCASTMLGELRTSVLSPKSYYELYMAVTNELC 71
Query: 68 ILSQYLVENHPTRHHLADLYELVQYTGNILPRLYLMLTVGVSFMQTKDCPAEEVLKDMIE 127
L YL E + DLYELVQY+ I+PRLYL++TVG+ +++ +LKD++E
Sbjct: 72 HLELYLSEKIDKK---TDLYELVQYSHTIVPRLYLLITVGIVYIKNDPTLKRSILKDLVE 128
Query: 128 MCRGVQHPIRGLFLRYYLSQRTKQSLTSDISLDKKFD------IQFIITNFIEMNKLWVR 181
MCRGVQHP+RGLFLR YL Q T+ L + + + + I F++TNF EMNKLWVR
Sbjct: 129 MCRGVQHPLRGLFLRNYLLQCTRNILPDVMVEENEHEGNVYDAIDFVLTNFAEMNKLWVR 188
Query: 182 LQHQGPLRERDLRTKERKELQILIGSNLVRLSQILDDSFALYRDEVLPQILEQVIQCRDV 241
+QHQG E+ R KER+EL+IL+G+NLVRLSQ+ + +Y+ +LP ILEQV+ CRD
Sbjct: 189 MQHQGHSSEKTRREKEREELKILVGTNLVRLSQLESATLEIYQRLILPGILEQVVSCRDA 248
Query: 242 VSQTYLLDVICQVFPDEFHLGTLSQLLDTTLKLNPDVVINKVVLSLIARLNGFWDRQDDP 301
++Q YL++ I QVFPDEFHL TL L + +L V + +++SLI RL + R
Sbjct: 249 IAQEYLMECIIQVFPDEFHLKTLDPFLKSCAQLETGVNVKNIIISLIERLAAYNQRS--- 305
Query: 302 NAIIQNLNHLKLDSNTDEEEHSADDGESTAEKLDSEPVSRNKFDLFFVFWKYLTKITEER 361
G+++ +D+ + + +LF VF + I + R
Sbjct: 306 -------------------------GKTSGNAIDA--IIPAEVELFEVFSVQVANIVQTR 338
Query: 362 PDLPLHEIIPLVHSIMLLSLKWYPSNLSNVDILYKFCWEKYQDFGKDIPEECEQSFKELF 421
D+PL + I L +++ L+ K YP + VD + + Q + +EL
Sbjct: 339 MDMPLEDTISLQVALLSLAQKVYPDRVDYVDKVLGTTAQILQRMNMNNISHLLSVNQELS 398
Query: 422 IYPLSTDNFYE---IITTCDSFQKLLSVQSITLQKSIINSILDKMVETNTKITDKQHLDK 478
+FY I +F LL T +KS+ ++ +++ T + D
Sbjct: 399 RLLRICIDFYNNALTIIQLQNFCPLLEKFDYTSRKSLALYLVMNILDNETLVPTADQADS 458
Query: 479 LGAICEPIISVPNNKPKTSILTVSDDLDSELTFFNPEQEKLAKLVHLIYHKNVDINTELL 538
L I P+I + + + D+E F EQ +A+ +HL+ D+ ++L
Sbjct: 459 LLTIITPLIKDDDTNKENGAAAGNTTPDAE--EFAEEQGVVARFIHLMRSDEPDMQYKML 516
Query: 539 LICKKWYYNGGKQ-LRFTYPALITAFWKLIRKLHFKSLKRPERKEDYNAKIKQLFKYVSR 597
+K NGG Q L+ P L+ A ++L K +K++ + D NA + Y +
Sbjct: 517 QTARKHLGNGGGQRLKHVLPPLVFAAYQLAFK--YKAIAEQDENWDKNALVIGEIGYTNH 574
Query: 598 CNTDLFNVCGLSISDLIFKLNLQTAAIADQLTLSEISYDFFSQAFTIFEESLSDSKVQFQ 657
++Y+F +QAF+++E+ +SDSK Q
Sbjct: 575 ---------------------------------ETVAYEFMTQAFSLYEDEISDSKAQLA 601
Query: 658 ALVNMAQVLQKTRSLYNDEGYYDTLITRCTLHGSKLLKKTDQCRAVYLCSHLWWATELTL 717
A+ + ++ S + +E + L T C L SKLLKK DQCR V C+ L+W+ +
Sbjct: 602 AITLIMSTFEQ-MSCFGEEN-AEPLRTNCALAASKLLKKPDQCRGVVACAALFWSGKQN- 658
Query: 718 IGEEEGVTKNFFREGKRVLECLQRSLRVADSIMDNVQSCQLMVEILGSCCYYFIHGDESE 777
GEE R+ KR L+CL++ R+A +D QL VE+L +YF G+
Sbjct: 659 -GEE-------MRDEKRTLDCLKKGARIASQCLDTGVQVQLYVELLNHYLFYFERGNSLI 710
Query: 778 THVGVKYIAGLVELIQANLKGLQLEE 803
T V + L+ + L L+ E
Sbjct: 711 T---VAMLNQLIAKVNEELPNLEPSE 733
>CE26372 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 793
Score = 351 bits (900), Expect = 3e-96
Identities = 255/819 (31%), Positives = 426/819 (51%), Gaps = 101/819 (12%)
Query: 22 MQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYELYIIIFDSLSILSQYLVENHPTRH 81
M+R L + K MDALKH ML E+R +LSPK YY LY+ L L LV+ +
Sbjct: 1 MKRCLDKGKTMDALKHALQMLNEMRTAELSPKFYYRLYMDSMHELQCLEVNLVQEYAQEP 60
Query: 82 -HLADLYELVQYTGNILPRLYLMLTVGVSFMQTKDCPAEEVLKDMIEMCRGVQHPIRGLF 140
L +LYE VQY I+PRLYL++T+G F++ +E+LKD++EMCRGVQHP+RGLF
Sbjct: 61 AKLGNLYECVQYASAIIPRLYLLVTIGGVFIKCGLGSRKEILKDLVEMCRGVQHPLRGLF 120
Query: 141 LRYYLSQRTKQSLTS-------------------------DISLDKKFDIQFIITNFIEM 175
LR YL Q T+ L D ++D D F++ NF EM
Sbjct: 121 LRNYLMQCTRSVLPDFPETEEMLVAHNDNLSKGTPKLKPRDGTVDDTID--FVLINFAEM 178
Query: 176 NKLWVRLQHQGPLRERDLRTKERKELQILIGSNLVRLSQILDDSFALYRDEVLPQILEQV 235
NKLWVR+QHQGP +E++ R K+R EL+IL+G+NLVRL+Q+ + +Y +VLP ILEQ+
Sbjct: 179 NKLWVRMQHQGPSKEKEKREKDRMELRILVGTNLVRLAQLEALTEEMYVKDVLPSILEQI 238
Query: 236 IQCRDVVSQTYLLDVICQVFPDEFHLGTLSQLLDTTLKLNPDVVINKVVLSLIARLNGFW 295
+ CRD +SQ YL++ + QVF D+FHL TL++ L+ +L DV I ++++L+ RL +
Sbjct: 239 VSCRDPISQEYLMECVIQVFADDFHLATLTEFLNACGQLQQDVNIKILLIALVDRLALY- 297
Query: 296 DRQDDPNAIIQNLNHLKLDSNTDEEEHSADDGESTAEKLDSEPVSRNKFDLFFVFWKYLT 355
T + +P + K LF +F + T
Sbjct: 298 ----------------------------------TTSYNEGQP-APTKMQLFEIFSEQAT 322
Query: 356 KITEERPDLPLHEIIPLVHSIMLLSLKWYPSNLSNVDILYKFCWEKYQDFGKDIPEECEQ 415
+ + RPD+PL +I+ L S++ L++K YP ++ ++ + ++ G E +
Sbjct: 323 TLIKNRPDMPLDDIVALHVSLVSLAVKCYPDRQDYANMTFQGLRQVIEEKGVTDIEAFGK 382
Query: 416 SFKELF-IYPLSTDNFYEI--ITTCDSFQKLLSVQSITLQKSIINSILDKMVETNTKITD 472
+EL + + D + + ++ + K+++ Q +I + ++ M+E T +
Sbjct: 383 VGRELTKLLNIPIDEYKNVLRLSQLPEYIKVMNYFDYRGQCNIASYMIQNMLEEETVFRN 442
Query: 473 KQHLDKLGAICEPIISVPNNKPKTSILTVSDDLDSELTFFNPEQEKLAKLVHLIYHKNVD 532
+ +D ++ I S+ ++ K S SD ++E F EQ +A+L+HLI +VD
Sbjct: 443 QDDVDSAFSL---ISSLLKDQEKQS----SDSHETE--EFADEQNLVARLLHLIRADDVD 493
Query: 533 INTELLLICKKWYYNGGK-QLRFTYPALITAFWKLIRKLHFKSLKRPERKEDYNAKIKQL 591
LL +K GG+ +LR+T P +I ++L+ L F +K + + ++AKI+++
Sbjct: 494 SQFLLLNSARKTLGEGGRHRLRYTLPPIIFELYRLV--LQFSDMK--DEDDKWDAKIRKM 549
Query: 592 FKYVSRCNTDLFNVCGLSISDLIFKLNLQTAAIADQLTLSE---ISYDFFSQAFTIFEES 648
F V T V +++L KL L A AD++ + + Y+F S+A +I E+
Sbjct: 550 F--VCAMGTIGALVSTAELAELPMKLYLNGAITADRVPFEDNHTVVYEFVSKALSILEDD 607
Query: 649 LSDSKVQFQALVNMAQVLQKTRSLYNDEGYYDTLITRCTLHGSKLLKKTDQCRAVYLCSH 708
+ DS+ + + L L KT L E + L + L +K+ KK DQ R++ +
Sbjct: 608 VVDSRDRVRCLHLTVGTLLKTTHL--PEENWQPLANQTVLAAAKMFKKPDQVRSLVTVAA 665
Query: 709 LWW-ATELTLIGEEEGVTKNFFREGKRVLECLQRSLRVADSIMDNVQSCQLMVEILGSCC 767
L+W L GE+ + GK+V++ L+++ ++A ++ + QL +++L +
Sbjct: 666 LYWHGQTLETNGEK-------MKNGKKVVDILRKAAKIARECLEPLVQQQLFIQLLSAYT 718
Query: 768 YYFIHGDESETHVGVKYIAGLVELIQANLKGLQLEESGE 806
YY+ +++ + V V +I L+ Q N +QL+ S E
Sbjct: 719 YYY---EDNCSEVNVDHIEELIARTQDN--AVQLDVSAE 752
>At1g75850 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 838
Score = 350 bits (899), Expect = 4e-96
Identities = 257/857 (29%), Positives = 436/857 (49%), Gaps = 139/857 (16%)
Query: 8 MEQAISHIKQQTILMQRSLTQKKLMDALKHCSDMLKELRNPDLSPKLYYEL--------- 58
+ + I+ I+ M R+L L + LK+ + ML ELR LSP+ YY+L
Sbjct: 14 LAEGIAGIQHNAFFMHRALDANNLREVLKYSALMLSELRTSKLSPQKYYDLCRFHRQRTL 73
Query: 59 ----------YIIIF---------DSLSILSQYLVENHPTRHHL--ADLYELVQYTGNIL 97
++IIF D L L + + +RH L DLYELVQ+ GNIL
Sbjct: 74 NLSIHACVDQFLIIFPSNLDMRAFDQLRQLEIFFKDE--SRHGLPVVDLYELVQHAGNIL 131
Query: 98 PRLYLMLTVGVSFMQTKDCPAEEVLKDMIEMCRGVQHPIRGLFLRYYLSQRTKQSLTSDI 157
PR+YL+ TVG ++++K P+++VLKD++EMCRGVQHPIRGLFLR YL+Q ++ L +I
Sbjct: 132 PRMYLLCTVGSVYIKSKQAPSKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLP-EI 190
Query: 158 SLDKKFD-------IQFIITNFIEMNKLWVRLQHQGPLRERDLRTKERKELQILIGSNLV 210
D + D ++F++ NF EMNKLWVR+QHQGP R+ + KER EL+ L+G NL
Sbjct: 191 GSDYEGDANTVMDAVEFVLQNFTEMNKLWVRIQHQGPGTVREKQEKERNELRDLVGKNLH 250
Query: 211 RLSQILDDSFALYRDEVLPQILEQVIQCRDVVSQTYLLDVICQVFPDEFHLGTLSQLLDT 270
L QI +Y++ VLP++LEQV+ C+D ++Q YL++ I QVFPDE+HL TL LL
Sbjct: 251 VLGQIEGVDLEMYKETVLPRVLEQVVNCKDKLAQYYLMECIIQVFPDEYHLQTLETLLAA 310
Query: 271 TLKLNPDVVINKVVLSLIARLNGFWDRQDDPNAIIQNLNHLKLDSNTDEEEHSADDGEST 330
+L P V V+ L+ RL+ + P+ + + L
Sbjct: 311 CTQLMPTVDTKIVLTQLMDRLSNY--AASSPDVLHEFL---------------------- 346
Query: 331 AEKLDSEPVSRNKFDLFFVFWKYLTKITEERPDLPLHEIIPLVHSIMLLSLKWYPSNLSN 390
+ + F + K+ + + ++P+ + L S++ +L+ +P L
Sbjct: 347 ------------QVEAFAKLSNAIGKVIDTQLEMPIVGAMTLFVSLLTFTLRVHPDRLDY 394
Query: 391 VDILYKFCWEKYQDFGKDIPEECEQSFKELFIYPLSTDNFYEIIT--TCDSFQKLLSVQS 448
VD + C K K + L PL + + +I+T T ++ +++
Sbjct: 395 VDQVLGACVVKLSSVPKLEDARAMKQVVALLSAPL--EKYSDIVTALTLSNYPRVMDHLD 452
Query: 449 ITLQKSIINSILDKMVETNTKITDKQHLDKLGAICEPIISVPNNKPKTSILTVSDDLDSE 508
K + I+ +++T++ I+ DK+ + E I + + +T+ +++LD E
Sbjct: 453 DGTNKVMAMLIIQSIMKTDSCISTA---DKVEVLFELIKGLIKDLDETN----AEELDEE 505
Query: 509 LTFFNPEQEKLAKLVHLIYHKNVD--------------------INTELLLICKKWYYNG 548
F EQ +A+L+H++ ++ + + ++ + ++ G
Sbjct: 506 --DFQEEQNSVARLIHMLDNEEPEEMLKSVAPLHPKHPTAPMLHYHEAIICVVRRHLMTG 563
Query: 549 G-KQLRFTYPALITAFWKLIRKLHFKSLKRPERKEDYNAKIKQLFKYVSRCNTDLFNVCG 607
G ++L FT P L+ + +L+R+L + + + +A +++F+ +++ L +V
Sbjct: 564 GPRRLPFTVPPLVFSAVRLVRQLESQG---GDIAGEDSATPRKIFQILNQTIEVLTSV-- 618
Query: 608 LSISDLIFKLNLQTAAIADQLTLSEISYDFFSQAFTIFEESLSDSKVQFQALVNMAQVLQ 667
+L +L LQ A A L ++Y+FF+QAF ++EE ++DSK Q A+ + LQ
Sbjct: 619 -PCPELALRLYLQCAEAASDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIVGTLQ 677
Query: 668 KTRSLYNDEGYYDTLITRCTLHGSKLLKKTDQCRAVYLCSHLWWATELTLIGEEEGVTKN 727
+ +++ E DTL + T + ++LLKK DQCRAVY CSHL+W + + +G+
Sbjct: 678 RI-NVFGVENR-DTLTHKATGYSARLLKKPDQCRAVYACSHLFW------VDDPDGI--- 726
Query: 728 FFREGKRVLECLQRSLRVADSIMDNVQSCQ-------LMVEILGSCCYYFIHGDESETHV 780
++G+RVL CL+R+LR+A++ + + L VEIL Y+F ++ H+
Sbjct: 727 --KDGERVLLCLRRALRIANAAQQMASATRGSSGPVTLFVEILNKYIYFF---EKGNPHI 781
Query: 781 GVKYIAGLVELIQANLK 797
I L+ELI ++
Sbjct: 782 TPSDIQSLIELINNEMQ 798
>Hs14767017 [U] KOG1107 Membrane coat complex Retromer subunit VPS35
Length = 190
Score = 98.2 bits (243), Expect = 5e-20
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 11/168 (6%)
Query: 639 SQAFTIFEESLSDSKVQFQALVNMAQVLQKTRSLYNDEGYYDTLITRCTLHGSKLLKKTD 698
SQAF+++E+ +SDSK Q A+ + ++ + E ++ L T+C L SKLLKK D
Sbjct: 2 SQAFSLYEDEISDSKAQLAAITLIIGTFERMKCF--SEENHEPLRTQCALAASKLLKKPD 59
Query: 699 QCRAVYLCSHLWWATELTLIGEEEGVTKNFFREGKRVLECLQRSLRVADSIMDNVQSCQL 758
Q RAV C+HL+W+ T EE GKRV+ECL+++L++A+ MD QL
Sbjct: 60 QGRAVSTCAHLFWSGRNTDKNGEE------LHGGKRVMECLKKALKIANQCMDPSLQVQL 113
Query: 759 MVEILGSCCYYFIHGDESETHVGVKYIAGLVELIQANLKGLQLEESGE 806
+EIL Y++ ++ V ++ + L++ I+ +L L+ E E
Sbjct: 114 FIEILNRYIYFY---EKENDAVTIQVLNQLIQKIREDLPNLESSEETE 158
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,607,230
Number of Sequences: 60738
Number of extensions: 2267851
Number of successful extensions: 6715
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6643
Number of HSP's gapped (non-prelim): 19
length of query: 879
length of database: 30,389,216
effective HSP length: 115
effective length of query: 764
effective length of database: 23,404,346
effective search space: 17880920344
effective search space used: 17880920344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)