ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1901 good J KOG2145 Translation, ribosomal structure and biogenesis Cytoplasmic tryptophanyl-tRNA synthetase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1901 677879 679174 432
(432 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOL097c [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 731 0.0
SPAC2F7.13c [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 516 e-146
Hs14754335 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 456 e-128
Hs4759316 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 453 e-127
7299154 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 439 e-123
At3g04600 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 404 e-112
CE24673 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 348 7e-96
ECU11g0530 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 332 5e-91
Hs20482401 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase 125 2e-28
>YOL097c [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 432
Score = 731 bits (1886), Expect = 0.0
Identities = 351/426 (82%), Positives = 389/426 (90%), Gaps = 2/426 (0%)
Query: 3 EQVTEKLENLSTTEEAGVEQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLA 62
E+VT+++ L +T+ EQ VTPWDVEG VDE G Q+IDY+KLIKQFGTK + EETL
Sbjct: 8 EKVTQQVSELKSTDVK--EQVVTPWDVEGGVDEQGRAQNIDYDKLIKQFGTKPVNEETLK 65
Query: 63 RFEAVTGHKPHHFLRKGVFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFI 122
RF+ VTG +PHHFLRKG+FFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPF+
Sbjct: 66 RFKQVTGREPHHFLRKGLFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFV 125
Query: 123 FTKWLQDVFDCPLVIELTDDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSD 182
FTKWLQ+VFD PLVIELTDDEKFLFK KLTI DVK F ++NAKDI+AVGF+P+ TFIFSD
Sbjct: 126 FTKWLQEVFDVPLVIELTDDEKFLFKHKLTINDVKNFARENAKDIIAVGFDPKNTFIFSD 185
Query: 183 LEYMGGGFYETVVRISRQITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGL 242
L+YMGG FYETVVR+SRQITGSTAKAVFGF DSDCIGKFHFASIQIA+AFPSSFP+VLGL
Sbjct: 186 LQYMGGAFYETVVRVSRQITGSTAKAVFGFNDSDCIGKFHFASIQIATAFPSSFPNVLGL 245
Query: 243 PDKTPCLIPCAIDQDPYFRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAI 302
PDKTPCLIPCAIDQDPYFRVCRDVADKLKYSKP+LLHSRFFPALQGS+TKMSASDDT+AI
Sbjct: 246 PDKTPCLIPCAIDQDPYFRVCRDVADKLKYSKPALLHSRFFPALQGSTTKMSASDDTTAI 305
Query: 303 FMTDTPKQIQKKINKYAFSGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQ 362
FMTDTPKQIQKKINKYAFSGG+VS + HR+ GGNPDVDVAYQYLSFFKDDD FLK+CYD+
Sbjct: 306 FMTDTPKQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKDDDVFLKECYDK 365
Query: 363 YKSGEMLSGEMKKICIETLQAFTKAFQERRAAVDDETLDKFMKPHKLVWGQQERLVPVKP 422
YKSGE+LSGEMKK+CIETLQ F KAFQERRA VD+ETLDKFM PHKLVWG++ERLV KP
Sbjct: 366 YKSGELLSGEMKKLCIETLQEFVKAFQERRAQVDEETLDKFMVPHKLVWGEKERLVAPKP 425
Query: 423 KEDKKK 428
K ++K
Sbjct: 426 KTKQEK 431
>SPAC2F7.13c [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 395
Score = 516 bits (1330), Expect = e-146
Identities = 253/392 (64%), Positives = 307/392 (77%), Gaps = 2/392 (0%)
Query: 21 EQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLARFEAVTGHKPHHFLRKGV 80
EQ VTPWDV+G++ + G ++ IDYE+LI QFGT+ I E L RFE +TG KPH LR+G
Sbjct: 5 EQIVTPWDVKGSIVD-GEEKGIDYERLIVQFGTRKITPEQLERFEKLTGKKPHLLLRRGA 63
Query: 81 FFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVIELT 140
FFS RDF ILD YEQ KPF+LYTGRGPSSDSMHLGHMIPF+F KWLQDVF PLVI+LT
Sbjct: 64 FFSHRDFDMILDRYEQKKPFYLYTGRGPSSDSMHLGHMIPFMFCKWLQDVFQVPLVIQLT 123
Query: 141 DDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMGGGFYETVVRISRQ 200
DDEKFLFK ++++D ++F ++NAKDI+AVGF+P+KTFIF + Y+GG FY+ VVRI++
Sbjct: 124 DDEKFLFKQGVSLEDCQRFARENAKDIIAVGFDPKKTFIFMNSTYVGGAFYQNVVRIAKC 183
Query: 201 ITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAIDQDPYF 260
IT + +KA FGFTDSD IGK HFASIQ A +F SSFP + PCLIPCAIDQDPYF
Sbjct: 184 ITANQSKACFGFTDSDSIGKIHFASIQAAPSFSSSFPHIFNGAKDIPCLIPCAIDQDPYF 243
Query: 261 RVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKINKYAF 320
R+ RDV+ +LK+ KP+LLHSRFFPALQG +KMSAS D+SAIFMTDTP +I+ KIN++AF
Sbjct: 244 RLTRDVSGRLKFKKPALLHSRFFPALQGPQSKMSASKDSSAIFMTDTPNKIKNKINRHAF 303
Query: 321 SGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKKICIET 380
SGG ++E HR+ GGNPDVDVAYQYLSFF DDDE LKQ Y+ YK+G + +GEMK CI+
Sbjct: 304 SGGGATIEIHREKGGNPDVDVAYQYLSFFLDDDEKLKQLYNTYKAGTLSTGEMKGECIKL 363
Query: 381 LQAFTKAFQERRAAVDDETLDKFMK-PHKLVW 411
LQ F FQ R+ VD+ TLD FM KL W
Sbjct: 364 LQQFVSDFQAARSKVDEATLDMFMDGSRKLEW 395
>Hs14754335 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 471
Score = 456 bits (1173), Expect = e-128
Identities = 222/391 (56%), Positives = 285/391 (72%), Gaps = 8/391 (2%)
Query: 21 EQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLARFEAVTGHKPHHFLRKGV 80
E V PW V+ + IDY+KLI +FG+ I +E + R E TG +PHHFLR+G+
Sbjct: 82 EDFVDPWTVQ-----TSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGI 136
Query: 81 FFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVIELT 140
FFS RD ++LD YE KPF+LYTGRGPSS++MH+GH+IPFIFTKWLQDVF+ PLVI++T
Sbjct: 137 FFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMT 196
Query: 141 DDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMG--GGFYETVVRIS 198
DDEK+L+K LT+ + +NAKDI+A GF+ KTFIFSDL+YMG GFY+ VV+I
Sbjct: 197 DDEKYLWKD-LTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255
Query: 199 RQITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAIDQDP 258
+ +T + K +FGFTDSDCIGK F +IQ A +F +SFP + CLIPCAIDQDP
Sbjct: 256 KHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDP 315
Query: 259 YFRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKINKY 318
YFR+ RDVA ++ Y KP+LLHS FFPALQG+ TKMSASD S+IF+TDT KQI+ K+NK+
Sbjct: 316 YFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKH 375
Query: 319 AFSGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKKICI 378
AFSGG+ ++EEHR++GGN DVDV++ YL+FF +DD+ L+Q Y SG ML+GE+KK I
Sbjct: 376 AFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALI 435
Query: 379 ETLQAFTKAFQERRAAVDDETLDKFMKPHKL 409
E LQ Q RR V DE + +FM P KL
Sbjct: 436 EVLQPLIAEHQARRKEVTDEIVKEFMTPRKL 466
>Hs4759316 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 471
Score = 453 bits (1165), Expect = e-127
Identities = 222/391 (56%), Positives = 284/391 (71%), Gaps = 8/391 (2%)
Query: 21 EQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLARFEAVTGHKPHHFLRKGV 80
E V PW V+ + IDY+KLI +FG+ I +E + R E TG +PHHFLR+G+
Sbjct: 82 EDFVDPWTVQ-----TSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGI 136
Query: 81 FFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVIELT 140
FFS RD ++LD YE KPF+LYTGRGPSS++MH+GH+IPFIFTKWLQDVF+ PLVI++T
Sbjct: 137 FFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNVPLVIQMT 196
Query: 141 DDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMG--GGFYETVVRIS 198
DDEK+L+K LT+ +NAKDI+A GF+ KTFIFSDL+YMG GFY+ VV+I
Sbjct: 197 DDEKYLWKD-LTLDQAYGDAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQ 255
Query: 199 RQITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAIDQDP 258
+ +T + K +FGFTDSDCIGK F +IQ A +F +SFP + CLIPCAIDQDP
Sbjct: 256 KHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDP 315
Query: 259 YFRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKINKY 318
YFR+ RDVA ++ Y KP+LLHS FFPALQG+ TKMSASD S+IF+TDT KQI+ K+NK+
Sbjct: 316 YFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKH 375
Query: 319 AFSGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKKICI 378
AFSGG+ ++EEHR++GGN DVDV++ YL+FF +DD+ L+Q Y SG ML+GE+KK I
Sbjct: 376 AFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALI 435
Query: 379 ETLQAFTKAFQERRAAVDDETLDKFMKPHKL 409
E LQ Q RR V DE + +FM P KL
Sbjct: 436 EVLQPLIAEHQARRKEVTDEIVKEFMTPRKL 466
>7299154 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 430
Score = 439 bits (1129), Expect = e-123
Identities = 219/397 (55%), Positives = 284/397 (71%), Gaps = 9/397 (2%)
Query: 18 AGVEQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLARFEAVTGHKPHHFLR 77
A E V PW+V + D +DY+KLIK+FG+ I EE +ARFE +TG HHF+R
Sbjct: 40 APTEDVVDPWNVASSNDAG-----VDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIR 94
Query: 78 KGVFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVI 137
+G+FFS RD IL L EQGKPF+LYTGRGPSS S+H+GH++PFI TKWLQ+ FD PLVI
Sbjct: 95 RGMFFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVI 154
Query: 138 ELTDDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMGG--GFYETVV 195
+LTDDEK L+K L ++D K ++NAKDIVA+GF+ KTFIF++LE++G Y+ ++
Sbjct: 155 QLTDDEKTLWKD-LKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNII 213
Query: 196 RISRQITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAID 255
RI + +T + K +FGF DSD IGK F + Q A A S+FP + G K CLIPCAID
Sbjct: 214 RIQKCVTFNQVKGIFGFGDSDIIGKIGFPAAQAAPAISSTFPFIFG-NRKVHCLIPCAID 272
Query: 256 QDPYFRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKI 315
QDPYFR+ RDVA +L + K +L+HS FFPALQG+ TKMSASD SA+++TDTPKQI+ KI
Sbjct: 273 QDPYFRMTRDVAPRLGFPKCALIHSTFFPALQGAKTKMSASDQNSAVYLTDTPKQIKNKI 332
Query: 316 NKYAFSGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKK 375
NKYAFSGG+VS+EEHRK GG P+VDV+YQ L FF +DD L++ Y GEML+GE+KK
Sbjct: 333 NKYAFSGGRVSVEEHRKLGGVPEVDVSYQLLKFFLEDDAKLEEVRVAYSKGEMLTGEIKK 392
Query: 376 ICIETLQAFTKAFQERRAAVDDETLDKFMKPHKLVWG 412
+ +ETL + Q R + DE LDK+ + L +G
Sbjct: 393 LAVETLTPIVEQHQAARKLITDEVLDKYFELRPLKFG 429
>At3g04600 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 402
Score = 404 bits (1037), Expect = e-112
Identities = 198/389 (50%), Positives = 273/389 (69%), Gaps = 6/389 (1%)
Query: 16 EEAGVEQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLARFEAVTGHKPHHF 75
E EQ V PW+V + + G IDY+KLI +FG + + E + R + +T +PH F
Sbjct: 10 EAESSEQVVNPWEV--SAKDGG---KIDYDKLIDKFGCQRLDESLIDRVQRLTSRQPHVF 64
Query: 76 LRKGVFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPL 135
LR+ VFF+ RDF +ILD YE+G F+LYTGRGPSS+++HLGH+IPF+FTK+LQ+ F PL
Sbjct: 65 LRRSVFFAHRDFNEILDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPL 124
Query: 136 VIELTDDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMGGGFYETVV 195
VI+LTDDEK ++K L++++ ++ ++NAKDI+A GF+ KTFIFSD +Y+GG FY+ +V
Sbjct: 125 VIQLTDDEKSIWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMV 183
Query: 196 RISRQITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAID 255
++ + +T + A +FGF+ D I K F +Q +FPSSFP + D CLIPCAID
Sbjct: 184 KVGKCVTLNKAMGIFGFSGEDPIAKLSFPPVQAVPSFPSSFPHLFPGKDNLRCLIPCAID 243
Query: 256 QDPYFRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKI 315
QDPYFR+ RDVA +L YSKP+L+ S FFPALQG + KMSASD SAI++TD+ K I+ KI
Sbjct: 244 QDPYFRMTRDVAPRLGYSKPALIESTFFPALQGENGKMSASDPNSAIYVTDSAKDIKNKI 303
Query: 316 NKYAFSGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKK 375
N+YAFSGG+ S+E+HR+ G N +VD+ +YLSFF +DD L+ +Y G ML+GE+KK
Sbjct: 304 NRYAFSGGQDSIEKHRELGANLEVDIPVKYLSFFLEDDSELEHIKKEYGEGRMLTGEVKK 363
Query: 376 ICIETLQAFTKAFQERRAAVDDETLDKFM 404
E L + + RAAV DE +D FM
Sbjct: 364 RLTEVLTEIVERHRRARAAVTDEMVDAFM 392
>CE24673 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 324
Score = 348 bits (894), Expect = 7e-96
Identities = 173/320 (54%), Positives = 228/320 (71%), Gaps = 13/320 (4%)
Query: 3 EQVTEKLENLSTTEEA---GV----EQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKA 55
EQV ++ENL A GV E +VTPW+V IDY+KLI +FG +
Sbjct: 6 EQVAAEIENLKVNGGAAGGGVQEDEEDRVTPWEVTTTK-----ATGIDYDKLIVKFGCRK 60
Query: 56 IGEETLARFEAVTGHKPHHFLRKGVFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHL 115
+ EE +ARFE VTGHK LR+G+FF+ RD T ILD EQGKPF+LYTGRG SS S+HL
Sbjct: 61 LDEEIIARFERVTGHKASPMLRRGMFFAHRDLTAILDRKEQGKPFYLYTGRGASSGSLHL 120
Query: 116 GHMIPFIFTKWLQDVFDCPLVIELTDDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPE 175
GH++PFIFTKWLQ+VFD PLVI++TDDEKFL+K + + + KK ++N KDI++VGF+P
Sbjct: 121 GHLVPFIFTKWLQEVFDVPLVIQMTDDEKFLWKD-MKVDEAKKMARENMKDIISVGFDPT 179
Query: 176 KTFIFSDLEYMGGGFYETVVRISRQITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSS 235
KTFIF++ +YM FYE +V+I + + + A+A+FGFT DC+GK F +++ A F SS
Sbjct: 180 KTFIFNNFDYMCPPFYENIVKIWKVVNTNQARAIFGFTPEDCLGKAAFPAVEAAPCFASS 239
Query: 236 FPDVLGLPDKTPCLIPCAIDQDPYFRVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSA 295
FP + G + PCLIPCAIDQDP+FR+ RDVA +LK SKPSL+ S F PAL G+ TKMSA
Sbjct: 240 FPQIFGKRNDIPCLIPCAIDQDPFFRMTRDVAPRLKASKPSLIFSTFLPALTGAQTKMSA 299
Query: 296 SDDTSAIFMTDTPKQIQKKI 315
S+ + IF++DT KQI+ K+
Sbjct: 300 SEPNTCIFLSDTAKQIKNKV 319
>ECU11g0530 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 385
Score = 332 bits (852), Expect = 5e-91
Identities = 172/388 (44%), Positives = 250/388 (64%), Gaps = 6/388 (1%)
Query: 21 EQKVTPWDVEGAVDENGVQQSIDYEKLIKQFGTKAIGEETLARFEAVTGHKPHHFLRKGV 80
EQ++TPWDVE V + V +IDY+K+I QFG + + R E ++G H+F R+G+
Sbjct: 3 EQRITPWDVE-VVSTDEVPVAIDYDKIINQFGCEKFNQALADRLEKLSGKPAHYFFRRGI 61
Query: 81 FFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFIFTKWLQDVFDCPLVIELT 140
F+ RDF +LD +PF+LYTGRGPSS +MH+GH IPF+ K++QD F LVI++T
Sbjct: 62 VFAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLCKYMQDAFKIRLVIQIT 121
Query: 141 DDEKFLFKPKLTIKDVKKFTKDNAKDIVAVGFNPEKTFIFSDLEYMGGGFYETVVRISRQ 200
DDEKFL+K + ++D + ++N KDIVA+GF+P+ T+IFS++E F E +++IS+
Sbjct: 122 DDEKFLWK-SMRLEDAMAYGRENIKDIVALGFDPKLTYIFSNVE-ASHHFEENILKISKT 179
Query: 201 ITGSTAKAVFGFTDSDCIGKFHFASIQIASAFPSSFPDVLGLPDKTPCLIPCAIDQDPYF 260
I + A VFGF S IG+ F + +IA F SSF + CL+P A+DQDP+F
Sbjct: 180 INLNEAIKVFGFDMSSNIGQVGFPAKEIAPCFSSSFRFI---GKGAMCLVPAAVDQDPFF 236
Query: 261 RVCRDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKINKYAF 320
R+ RD A L KPS ++ P L+G + KMSASD S+I++ D I+KKI YA+
Sbjct: 237 RLARDKAKALGEKKPSSIYVSLLPDLKGVNRKMSASDPNSSIYLDDAQDTIRKKIIAYAY 296
Query: 321 SGGKVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKKICIET 380
SGG+ ++EEHR+ GG+ DVDV ++YL +F DDD+ L++ Y GE+ S EMK+ C+
Sbjct: 297 SGGRKTLEEHREKGGDIDVDVPFEYLKYFLDDDQELEKYRSGYIKGEITSKEMKEKCVVV 356
Query: 381 LQAFTKAFQERRAAVDDETLDKFMKPHK 408
+Q F +QE R V D+ L F+ +K
Sbjct: 357 IQEFVSRYQESRKRVTDDDLRAFIDINK 384
>Hs20482401 [J] KOG2145 Cytoplasmic tryptophanyl-tRNA synthetase
Length = 144
Score = 125 bits (313), Expect = 2e-28
Identities = 67/140 (47%), Positives = 94/140 (66%), Gaps = 1/140 (0%)
Query: 264 RDVADKLKYSKPSLLHSRFFPALQGSSTKMSASDDTSAIFMTDTPKQIQKKINKYAFSGG 323
RD+A ++ Y KP LLHS FF LQG KMSASD +S IF+T+ QI+ KI+K+AFSG
Sbjct: 3 RDIAPRIGYPKPVLLHSSFFSDLQGIQNKMSASDPSSFIFLTNMAMQIKTKISKHAFSGE 62
Query: 324 KVSMEEHRKYGGNPDVDVAYQYLSFFKDDDEFLKQCYDQYKSGEMLSGEMKKICIETLQA 383
+ ++EEHR +GGN VDV++ YL+F KD+D+ L+Q S +ML+G++KK+ IE LQ
Sbjct: 63 RDTIEEHRHFGGNCVVDVSFMYLTFLKDEDK-LEQMRKDDTSRDMLTGDLKKMLIEVLQP 121
Query: 384 FTKAFQERRAAVDDETLDKF 403
Q + V DE + +F
Sbjct: 122 VITEHQAQCKEVMDELVKEF 141
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.137 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,398,492
Number of Sequences: 60738
Number of extensions: 1253798
Number of successful extensions: 2915
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2891
Number of HSP's gapped (non-prelim): 9
length of query: 432
length of database: 30,389,216
effective HSP length: 109
effective length of query: 323
effective length of database: 23,768,774
effective search space: 7677314002
effective search space used: 7677314002
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)