ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII1960.1 good J KOG1754 Translation, ribosomal structure and biogenesis 40S ribosomal protein S15/S22
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII1960.1 702105 701893 -71
(71 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL190c [J] KOG1754 40S ribosomal protein S15/S22 87 4e-18
YLR367w [J] KOG1754 40S ribosomal protein S15/S22 86 7e-18
CE10884 [J] KOG1754 40S ribosomal protein S15/S22 74 4e-14
7292864 [J] KOG1754 40S ribosomal protein S15/S22 70 5e-13
SPAC5D6.01 [J] KOG1754 40S ribosomal protein S15/S22 70 7e-13
SPAC22A12.04c [J] KOG1754 40S ribosomal protein S15/S22 70 7e-13
Hs14165469 [J] KOG1754 40S ribosomal protein S15/S22 70 7e-13
At2g39590 [J] KOG1754 40S ribosomal protein S15/S22 69 1e-12
At5g59850 [J] KOG1754 40S ribosomal protein S15/S22 68 2e-12
At1g07770 [J] KOG1754 40S ribosomal protein S15/S22 68 2e-12
Hs14742864 [J] KOG1754 40S ribosomal protein S15/S22 67 4e-12
At3g46040 [J] KOG1754 40S ribosomal protein S15/S22 67 6e-12
Hs22060861 [J] KOG1754 40S ribosomal protein S15/S22 64 5e-11
Hs17441654 [J] KOG1754 40S ribosomal protein S15/S22 63 6e-11
Hs17456243 [J] KOG1754 40S ribosomal protein S15/S22 62 1e-10
Hs17487758 [J] KOG1754 40S ribosomal protein S15/S22 54 4e-08
Hs17452677 [J] KOG1754 40S ribosomal protein S15/S22 54 5e-08
Hs17445846 [J] KOG1754 40S ribosomal protein S15/S22 53 7e-08
Hs22057855 [J] KOG1754 40S ribosomal protein S15/S22 52 1e-07
Hs17476720 [J] KOG1754 40S ribosomal protein S15/S22 49 2e-06
Hs17488911 [J] KOG1754 40S ribosomal protein S15/S22 43 7e-05
At2g19720 [J] KOG1754 40S ribosomal protein S15/S22 40 8e-04
ECU09g1350 [J] KOG1754 40S ribosomal protein S15/S22 39 0.001
At4g29430 [J] KOG1754 40S ribosomal protein S15/S22 39 0.002
Hs17482323 [J] KOG1754 40S ribosomal protein S15/S22 35 0.014
At2g30710 [U] KOG1092 Ypt/Rab-specific GTPase-activating protein... 28 1.8
7298187 [KT] KOG1513 Nuclear helicase MOP-3/SNO (DEAD-box superf... 27 6.7
Hs7662410 [KT] KOG1513 Nuclear helicase MOP-3/SNO (DEAD-box supe... 26 8.7
>YJL190c [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 87.0 bits (214), Expect = 4e-18
Identities = 44/45 (97%), Positives = 45/45 (99%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
MTR+SVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
>YLR367w [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 86.3 bits (212), Expect = 7e-18
Identities = 43/45 (95%), Positives = 45/45 (99%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
MTR+SVLADALNAINNAEKTGKRQVL+RPSSKVIIKFLQVMQKHG
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHG 45
>CE10884 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 73.9 bits (180), Expect = 4e-14
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R +VLADALNAINNAEK GKRQVLIRP+SKVI++FL VM KHG
Sbjct: 1 MVRMNVLADALNAINNAEKRGKRQVLIRPASKVIVRFLTVMMKHG 45
>7292864 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 70.1 bits (170), Expect = 5e-13
Identities = 35/45 (77%), Positives = 37/45 (81%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R +VLADAL INNAEK GKRQVL+RP SKVIIKFL VM KHG
Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHG 45
>SPAC5D6.01 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 69.7 bits (169), Expect = 7e-13
Identities = 35/45 (77%), Positives = 38/45 (83%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R SVLAD LN I NAE+ G+RQVLIRPSSKVI+KFL VMQKHG
Sbjct: 1 MVRQSVLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQKHG 45
>SPAC22A12.04c [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 69.7 bits (169), Expect = 7e-13
Identities = 35/45 (77%), Positives = 38/45 (83%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R SVLAD LN I NAE+ G+RQVLIRPSSKVI+KFL VMQKHG
Sbjct: 1 MVRQSVLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQKHG 45
>Hs14165469 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 69.7 bits (169), Expect = 7e-13
Identities = 34/45 (75%), Positives = 38/45 (83%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R +VLADAL +INNAEK GKRQVLIRP SKVI++FL VM KHG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHG 45
>At2g39590 [J] KOG1754 40S ribosomal protein S15/S22
Length = 136
Score = 68.9 bits (167), Expect = 1e-12
Identities = 34/45 (75%), Positives = 38/45 (83%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R SVL D L +++NAEK GKRQV+IRPSSKVIIKFL VMQKHG
Sbjct: 7 MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHG 51
>At5g59850 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 68.2 bits (165), Expect = 2e-12
Identities = 35/45 (77%), Positives = 38/45 (83%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHG
Sbjct: 1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHG 45
>At1g07770 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 68.2 bits (165), Expect = 2e-12
Identities = 35/45 (77%), Positives = 38/45 (83%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R SVL DAL ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHG
Sbjct: 1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHG 45
>Hs14742864 [J] KOG1754 40S ribosomal protein S15/S22
Length = 129
Score = 67.0 bits (162), Expect = 4e-12
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R + LADAL +INNAEK GKRQVL+RP SKVI++FL VM KHG
Sbjct: 1 MVRMNALADALKSINNAEKRGKRQVLLRPCSKVIVQFLTVMMKHG 45
>At3g46040 [J] KOG1754 40S ribosomal protein S15/S22
Length = 130
Score = 66.6 bits (161), Expect = 6e-12
Identities = 34/45 (75%), Positives = 37/45 (81%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R SVL D L ++ NAEK GKRQV+IRPSSKVIIKFL VMQKHG
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHG 45
>Hs22060861 [J] KOG1754 40S ribosomal protein S15/S22
Length = 133
Score = 63.5 bits (153), Expect = 5e-11
Identities = 31/45 (68%), Positives = 36/45 (79%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M +VLADAL +INNAEK GKR VLIRP SK+I++FL VM KHG
Sbjct: 1 MVCVNVLADALKSINNAEKRGKRPVLIRPCSKLIVRFLTVMMKHG 45
>Hs17441654 [J] KOG1754 40S ribosomal protein S15/S22
Length = 129
Score = 63.2 bits (152), Expect = 6e-11
Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M RT+VLADAL INNA+K GKRQVL+RP S+VII+FL VM KHG
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTVM-KHG 44
>Hs17456243 [J] KOG1754 40S ribosomal protein S15/S22
Length = 108
Score = 62.4 bits (150), Expect = 1e-10
Identities = 31/45 (68%), Positives = 36/45 (79%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R +VLADAL +INNA+K GK QVLI P SKVII+FL V+ KHG
Sbjct: 1 MVRINVLADALKSINNAKKRGKHQVLIGPCSKVIIRFLTVIMKHG 45
>Hs17487758 [J] KOG1754 40S ribosomal protein S15/S22
Length = 158
Score = 53.9 bits (128), Expect = 4e-08
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M ++L DAL IN+AEK GK Q LIR SKVII+FL +M KHG
Sbjct: 1 MAHMNILTDALKGINDAEKRGKCQFLIRLCSKVIIRFLTLMMKHG 45
>Hs17452677 [J] KOG1754 40S ribosomal protein S15/S22
Length = 273
Score = 53.5 bits (127), Expect = 5e-08
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M R +VLAD L +IN A+K GK Q LIR SKV I FL VM KHG
Sbjct: 1 MVRKNVLADVLKSINTAKKRGKHQALIRLCSKVTICFLTVMMKHG 45
>Hs17445846 [J] KOG1754 40S ribosomal protein S15/S22
Length = 114
Score = 53.1 bits (126), Expect = 7e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
M +VL DAL +INNAE+ GK QVLIR SK+II FL VM K+G
Sbjct: 1 MVHMNVLPDALKSINNAERRGKPQVLIRLCSKIIIWFLTVMVKYG 45
>Hs22057855 [J] KOG1754 40S ribosomal protein S15/S22
Length = 107
Score = 52.0 bits (123), Expect = 1e-07
Identities = 28/44 (63%), Positives = 31/44 (69%)
Query: 2 TRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
TR + A +INNAEK K QVLIRP SKVII+FL VM KHG
Sbjct: 7 TRVHEVQAAALSINNAEKRSKCQVLIRPFSKVIIQFLTVMMKHG 50
>Hs17476720 [J] KOG1754 40S ribosomal protein S15/S22
Length = 224
Score = 48.5 bits (114), Expect = 2e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
VLADAL + NNA+K GK QVL+ P S+ II FL VM K G
Sbjct: 6 VLADALKSNNNAKKRGKHQVLMGPCSRAIIWFLTVMMKRG 45
>Hs17488911 [J] KOG1754 40S ribosomal protein S15/S22
Length = 105
Score = 43.1 bits (100), Expect = 7e-05
Identities = 26/41 (63%), Positives = 28/41 (67%), Gaps = 1/41 (2%)
Query: 5 SVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
+ LADAL IN K GK QVLIR SKVII FL V+ KHG
Sbjct: 5 NALADALKNINTG-KGGKCQVLIRLCSKVIIWFLTVLMKHG 44
>At2g19720 [J] KOG1754 40S ribosomal protein S15/S22
Length = 129
Score = 39.7 bits (91), Expect = 8e-04
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
+L DAL I NAEK GK V ++P S V+ FL++M++ G
Sbjct: 5 ILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKG 44
>ECU09g1350 [J] KOG1754 40S ribosomal protein S15/S22
Length = 128
Score = 39.3 bits (90), Expect = 0.001
Identities = 19/42 (45%), Positives = 29/42 (68%)
Query: 4 TSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
++ LA+ AINNA + GKRQ+L+R S++ + FL M +HG
Sbjct: 2 SAALANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHG 43
>At4g29430 [J] KOG1754 40S ribosomal protein S15/S22
Length = 129
Score = 38.5 bits (88), Expect = 0.002
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 6 VLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHG 45
+L DAL I NAE+ GK V ++P S V+ FL++M++ G
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKG 44
>Hs17482323 [J] KOG1754 40S ribosomal protein S15/S22
Length = 112
Score = 35.4 bits (80), Expect = 0.014
Identities = 16/27 (59%), Positives = 20/27 (73%)
Query: 19 KTGKRQVLIRPSSKVIIKFLQVMQKHG 45
K GKRQ++ R SK I++FL VM KHG
Sbjct: 3 KRGKRQIITRRCSKDILRFLIVMMKHG 29
>At2g30710 [U] KOG1092 Ypt/Rab-specific GTPase-activating protein GYP1
Length = 343
Score = 28.5 bits (62), Expect = 1.8
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 41 MQKHGMSIFPFSMKYQSTLLLRKISFEVV 69
M++HG+ F+ ++ + LL+R+I F ++
Sbjct: 234 MEEHGLEFLQFAFRWYNCLLIREIPFNLI 262
>7298187 [KT] KOG1513 Nuclear helicase MOP-3/SNO (DEAD-box superfamily)
Length = 1801
Score = 26.6 bits (57), Expect = 6.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 36 KFLQVMQKHG---MSIFPFSMKYQSTLLLRKISFEVVTF 71
+F+ ++K G M I MK + T + R++SF+ V+F
Sbjct: 984 EFVNAVEKRGIGAMEIVAMDMKLRGTYIARQLSFKDVSF 1022
>Hs7662410 [KT] KOG1513 Nuclear helicase MOP-3/SNO (DEAD-box superfamily)
Length = 1366
Score = 26.2 bits (56), Expect = 8.7
Identities = 14/39 (35%), Positives = 20/39 (50%), Gaps = 3/39 (7%)
Query: 36 KFLQVMQKHG---MSIFPFSMKYQSTLLLRKISFEVVTF 71
+FL ++K G M I MK + R++SF VTF
Sbjct: 450 EFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVTF 488
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.134 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,967,175
Number of Sequences: 60738
Number of extensions: 75433
Number of successful extensions: 280
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 254
Number of HSP's gapped (non-prelim): 28
length of query: 71
length of database: 30,389,216
effective HSP length: 47
effective length of query: 24
effective length of database: 27,534,530
effective search space: 660828720
effective search space used: 660828720
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)