ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2022 good J KOG3344 Translation, ribosomal structure and biogenesis 40s ribosomal protein s10
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2022 722574 722257 -106
(106 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR293w [J] KOG3344 40s ribosomal protein s10 177 2e-45
YMR230w [J] KOG3344 40s ribosomal protein s10 175 1e-44
SPBP22H7.08 [J] KOG3344 40s ribosomal protein s10 129 9e-31
SPAC31G5.17c [J] KOG3344 40s ribosomal protein s10 127 3e-30
Hs4506679 [J] KOG3344 40s ribosomal protein s10 114 2e-26
Hs13639605 [J] KOG3344 40s ribosomal protein s10 112 9e-26
At4g25740 [J] KOG3344 40s ribosomal protein s10 105 8e-24
Hs22054516 [J] KOG3344 40s ribosomal protein s10 105 1e-23
CE09041 [J] KOG3344 40s ribosomal protein s10 104 2e-23
7301612 [J] KOG3344 40s ribosomal protein s10 104 2e-23
7293606 [J] KOG3344 40s ribosomal protein s10 104 2e-23
At5g52650 [J] KOG3344 40s ribosomal protein s10 103 4e-23
At5g41520 [J] KOG3344 40s ribosomal protein s10 100 3e-22
Hs22046047 [J] KOG3344 40s ribosomal protein s10 100 3e-22
Hs17435860 [J] KOG3344 40s ribosomal protein s10 93 7e-20
Hs20556205 [J] KOG3344 40s ribosomal protein s10 89 1e-18
Hs20485470 [J] KOG3344 40s ribosomal protein s10 52 1e-07
Hs17485002 [J] KOG3344 40s ribosomal protein s10 52 1e-07
>YOR293w [J] KOG3344 40s ribosomal protein s10
Length = 105
Score = 177 bits (449), Expect = 2e-45
Identities = 84/102 (82%), Positives = 93/102 (90%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
ML+PKEDR KI+Q+LFQEGV+VAKKDFNQ KHEEIDTKNL+VIKALQSLTSKG+VKTQFS
Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQ 102
WQYYYYTLTEEGV YLREYLNLPEHI P TY+ ++ QRPQ
Sbjct: 61 WQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPTQRPQ 102
>YMR230w [J] KOG3344 40s ribosomal protein s10
Length = 105
Score = 175 bits (443), Expect = 1e-44
Identities = 82/102 (80%), Positives = 93/102 (90%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
ML+PK++R KI+Q+LFQEGV+VAKKDFNQ KHEEIDTKNL+VIKALQSLTSKG+VKTQFS
Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQ 102
WQYYYYTLTEEGV YLREYLNLPEHI P TY+ ++ QRPQ
Sbjct: 61 WQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPSQRPQ 102
>SPBP22H7.08 [J] KOG3344 40s ribosomal protein s10
Length = 147
Score = 129 bits (323), Expect = 9e-31
Identities = 60/91 (65%), Positives = 75/91 (81%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
MLIPKE+RK I+Q LFQ+GVLVAKKDFN PKH E+ NL VIKA QSL S+G++KT+++
Sbjct: 1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATY 91
W ++YYTLT EGV YLREYL+LP + PAT+
Sbjct: 61 WGWFYYTLTNEGVEYLREYLHLPAEVVPATH 91
>SPAC31G5.17c [J] KOG3344 40s ribosomal protein s10
Length = 144
Score = 127 bits (318), Expect = 3e-30
Identities = 59/91 (64%), Positives = 74/91 (80%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
MLIPKE+RK I+Q LF +GVLVAKKDFN PKH E+ NL VIKA QSL S+G++KT+++
Sbjct: 1 MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATY 91
W ++YYTLT EGV YLREYL+LP + PAT+
Sbjct: 61 WGWFYYTLTNEGVEYLREYLHLPAEVVPATH 91
>Hs4506679 [J] KOG3344 40s ribosomal protein s10
Length = 165
Score = 114 bits (285), Expect = 2e-26
Identities = 57/108 (52%), Positives = 80/108 (73%), Gaps = 5/108 (4%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKN---LFVIKALQSLTSKGFVKT 57
ML+PK++R IY+ LF+EGV+VAKKD + PKH E+ KN L V+KA+QSL S+G+VK
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFSWQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAG--QSGDQRPQG 103
QF+W+++Y+ LT EG+ YLR+YL+LP I PAT ++G RP+G
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKG 108
>Hs13639605 [J] KOG3344 40s ribosomal protein s10
Length = 128
Score = 112 bits (280), Expect = 9e-26
Identities = 56/108 (51%), Positives = 79/108 (72%), Gaps = 5/108 (4%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKN---LFVIKALQSLTSKGFVKT 57
ML+PK++R IY+ LF+EGV+VAKKD + PKH E+ KN L V+KA+Q L S+G+VK
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQFLKSRGYVKE 60
Query: 58 QFSWQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAG--QSGDQRPQG 103
QF+W+++Y+ LT EG+ YLR+YL+LP I PAT ++G RP+G
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLCRSRPETGRPRPKG 108
>At4g25740 [J] KOG3344 40s ribosomal protein s10
Length = 177
Score = 105 bits (263), Expect = 8e-24
Identities = 51/103 (49%), Positives = 68/103 (65%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
M+I + +R++I ++LF+EGV AKKDFN PKH ID NL VIK +QS SK +V+ F+
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQG 103
W +YY+ LT EG+ +LR YLNLP + PAT RP G
Sbjct: 61 WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFG 103
>Hs22054516 [J] KOG3344 40s ribosomal protein s10
Length = 128
Score = 105 bits (261), Expect = 1e-23
Identities = 53/108 (49%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKN---LFVIKALQSLTSKGFVKT 57
ML+PK++R IY+ LF+EG +VAKKD PK E+ KN L V+KA+QSL S+G++K
Sbjct: 1 MLMPKKNRIAIYELLFKEGAMVAKKDVYTPKQPELADKNVPNLHVMKAMQSLKSRGYMKE 60
Query: 58 QFSWQYYYYTLTEEGVVYLREYLNLPEHIFPAT--YLAGQSGDQRPQG 103
QF+W+++Y+ LT EG+ +LR+YL+LP I PAT + ++G RP+G
Sbjct: 61 QFAWRHFYWYLTNEGIHHLRDYLHLPPEIVPATLCHSRPETGRPRPKG 108
>CE09041 [J] KOG3344 40s ribosomal protein s10
Length = 149
Score = 104 bits (259), Expect = 2e-23
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEID-TKNLFVIKALQSLTSKGFVKTQF 59
M IPK K IY++LF EGV VAKKDFN H I+ NL VIK L+SL S+ VK QF
Sbjct: 1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELVKEQF 60
Query: 60 SWQYYYYTLTEEGVVYLREYLNLPEHIFPAT 90
+W++YY+ LT+ G++YLREYL LP I PAT
Sbjct: 61 AWRHYYWYLTDAGILYLREYLALPAEIVPAT 91
>7301612 [J] KOG3344 40s ribosomal protein s10
Length = 163
Score = 104 bits (259), Expect = 2e-23
Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDT-KNLFVIKALQSLTSKGFVKTQF 59
M IPK +R IY++LF+EGVLVAKKD KH E+D NL VIK +QSL S+G+VK QF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 60 SWQYYYYTLTEEGVVYLREYLNLPEHIFPATYL-AGQSGDQRPQG 103
+W+++Y+ LT EG+ LR YL+LP I P+T +S RP+G
Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRG 105
>7293606 [J] KOG3344 40s ribosomal protein s10
Length = 158
Score = 104 bits (259), Expect = 2e-23
Identities = 50/89 (56%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Query: 3 IPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDT-KNLFVIKALQSLTSKGFVKTQFSW 61
+PK R IY++LF+EGV+VAKKDF+ KH E+++ NL VIKA+QSL S+G VK QF+W
Sbjct: 1 MPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAW 60
Query: 62 QYYYYTLTEEGVVYLREYLNLPEHIFPAT 90
++YY+ LT EG+ LR YL+LP I P+T
Sbjct: 61 RHYYWYLTNEGIEELRSYLHLPPEIVPST 89
>At5g52650 [J] KOG3344 40s ribosomal protein s10
Length = 179
Score = 103 bits (257), Expect = 4e-23
Identities = 51/103 (49%), Positives = 67/103 (64%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
M+I + +RK+I ++LF+EGV AKKDFN KH ID NL VIK +QS SK +V+ F+
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQG 103
W +YY+ LT EG+ +LR YLNLP + PAT RP G
Sbjct: 61 WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFG 103
>At5g41520 [J] KOG3344 40s ribosomal protein s10
Length = 180
Score = 100 bits (250), Expect = 3e-22
Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDT-KNLFVIKALQSLTSKGFVKTQF 59
M+I + +R++I ++LF+EGVL AKKDFN P+H I++ NL VIK +QS SK +V+ F
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 60 SWQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQG 103
+W +YY+ LT EG+ +LR YLNLP I PAT Q RP G
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFG 104
>Hs22046047 [J] KOG3344 40s ribosomal protein s10
Length = 155
Score = 100 bits (249), Expect = 3e-22
Identities = 49/107 (45%), Positives = 71/107 (65%), Gaps = 3/107 (2%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKN---LFVIKALQSLTSKGFVKT 57
ML+PK++ +Y+ LF+EGV+VAKKD + PKH E+ KN L V+KA+QSL S+G+
Sbjct: 1 MLVPKKNHIVVYELLFKEGVVVAKKDVHMPKHLELADKNVPNLHVMKAMQSLKSRGYNTE 60
Query: 58 QFSWQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQGK 104
F+W+++Y+ LT EG+ YL +YL+LP P T + RPQ K
Sbjct: 61 HFAWRHFYWYLTNEGIQYLHDYLHLPLETVPVTLCCSHPENGRPQPK 107
>Hs17435860 [J] KOG3344 40s ribosomal protein s10
Length = 148
Score = 92.8 bits (229), Expect = 7e-20
Identities = 46/103 (44%), Positives = 72/103 (69%), Gaps = 5/103 (4%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTKNLFVIKALQSLTSKGFVKTQFS 60
ML+PK+++ Y+ +F+EGV+VAKKD + PKH E+ KN V A+QSL S+G++K F+
Sbjct: 1 MLMPKKNQIATYELIFKEGVMVAKKDVHMPKHPELADKN--VPNAMQSLKSQGYMKEHFA 58
Query: 61 WQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQG 103
W+++Y LT+EG+ YL +YL+LP I + ++G RP+G
Sbjct: 59 WRHFYCDLTKEGIQYLCDYLHLPPEI---VHSRPENGRPRPKG 98
>Hs20556205 [J] KOG3344 40s ribosomal protein s10
Length = 203
Score = 89.0 bits (219), Expect = 1e-18
Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 11/108 (10%)
Query: 1 MLIPKEDRKKIYQHLFQEGVLVAKKDFNQPKHEEIDTK---NLFVIKALQSLTSKGFVKT 57
ML+PK+++ IY+ LF+EGV+V KKD + P+H E+ K NL V+KA+QSL SKG+VK
Sbjct: 1 MLMPKKNQIAIYELLFKEGVMVTKKDVHMPRHPELADKNVSNLHVMKAMQSLKSKGYVKE 60
Query: 58 QFSWQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAG--QSGDQRPQG 103
QF+W+++Y + YL +YL+LP PA ++G RP+G
Sbjct: 61 QFAWRHFYC------IQYLCDYLHLPLETVPAILCRSRPETGRSRPKG 102
>Hs20485470 [J] KOG3344 40s ribosomal protein s10
Length = 114
Score = 52.4 bits (124), Expect = 1e-07
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 15/78 (19%)
Query: 30 PKHEEIDTKN---LFVIKALQSLTSKGFVKTQFSWQYYYYTLTEEGVVYLREYLNLPEHI 86
PKH E+ KN L V+KA+QSL +++Y+ LT EG+ YLR+YL+LP I
Sbjct: 2 PKHPELADKNVPNLHVMKAMQSL------------KHFYWYLTNEGIQYLRDYLHLPLEI 49
Query: 87 FPATYLAGQSGDQRPQGK 104
PAT + RP K
Sbjct: 50 VPATLRHNRPETGRPPPK 67
>Hs17485002 [J] KOG3344 40s ribosomal protein s10
Length = 113
Score = 52.4 bits (124), Expect = 1e-07
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 46 LQSLTSKGF-VKTQFSWQYYYYTLTEEGVVYLREYLNLPEHIFPATYLAGQSGDQRPQGK 104
+QS S+G+ +K QF+W + + LT E + YLR+YL+LP I PAT + RPQ K
Sbjct: 1 MQSFKSRGYYMKEQFAWSHVCWYLTNEDIQYLRDYLHLPLEIVPATLRRSRPWTGRPQSK 60
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,853,769
Number of Sequences: 60738
Number of extensions: 258310
Number of successful extensions: 651
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 617
Number of HSP's gapped (non-prelim): 18
length of query: 106
length of database: 30,389,216
effective HSP length: 82
effective length of query: 24
effective length of database: 25,408,700
effective search space: 609808800
effective search space used: 609808800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)