ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2055 good A KOG1070 RNA processing and modification rRNA processing protein Rrp5
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2055 729850 735036 1729
(1729 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR229c [A] KOG1070 rRNA processing protein Rrp5 1864 0.0
SPCC1183.07 [A] KOG1070 rRNA processing protein Rrp5 878 0.0
Hs20544347 [A] KOG1070 rRNA processing protein Rrp5 374 e-102
At3g11964 [A] KOG1070 rRNA processing protein Rrp5 212 5e-54
CE27690 [A] KOG1070 rRNA processing protein Rrp5 178 8e-44
At5g45990 [D] KOG1915 Cell cycle control protein (crooked neck) 59 9e-08
SPBC31F10.11c [D] KOG1915 Cell cycle control protein (crooked neck) 56 6e-07
At3g13210 [D] KOG1915 Cell cycle control protein (crooked neck) 54 2e-06
Hs6912732 [A] KOG0495 HAT repeat protein 53 4e-06
7293846 [A] KOG0495 HAT repeat protein 52 8e-06
>YMR229c [A] KOG1070 rRNA processing protein Rrp5
Length = 1729
Score = 1864 bits (4829), Expect = 0.0
Identities = 946/1731 (54%), Positives = 1246/1731 (71%), Gaps = 49/1731 (2%)
Query: 1 MVAPQSKRKRDDESPLVRQDATEAPAKSALSKS-EEISFPRGGSSALSPLEVKQVGNEVV 59
MVA +KRKRD++ PL R+D+T+ P+ S+L ++ EE+SFPRGG+SAL+PLE+KQV NE
Sbjct: 1 MVA-STKRKRDEDFPLSREDSTKQPSTSSLVRNTEEVSFPRGGASALTPLELKQVANEAA 59
Query: 60 ADVLFGKD--ESATGAEGPTXXXXXXXXXXFDQIXXXXXXXXXXXXXLIEHFGMKQMTKG 117
+DVLFG + +++ A P LIEH K + G
Sbjct: 60 SDVLFGNESVKASEPASRPLKKKKTTKKSTSKDSEASSANSDEARAGLIEHVNFKTLKNG 119
Query: 118 TIVLGQIQSISKHELKISLVDGLHGYVSLTDISEQMTKILENLXXXXXXXXXXXXXXXX- 176
+ +LGQI +I+K +L I+ DG+ GYV+LT ISE+ T ILE+L
Sbjct: 120 SSLLGQISAITKQDLCITFTDGISGYVNLTHISEEFTSILEDLDEDMDSDTDAADEKKSK 179
Query: 177 -------XXXXXXXXITTPKELPDLNKYFKIGQWLRCMVQNNSALE----SNKNKKLDLS 225
+ ELP+L +YF IGQWLRC V N++LE +K K+++L+
Sbjct: 180 VEDAEYESSDDEDEKLDKSNELPNLRRYFHIGQWLRCSVIKNTSLEPSTKKSKKKRIELT 239
Query: 226 IEPSVVNVFEDDDLAKNCPLQCSLKSIEDHGAILDIGIENLTGFISKKDIPEFSSLLPGM 285
IEPS VN++ D+DL K+ +QC++KSIEDHGA LD+G+ TGFI+KKD F LLPG
Sbjct: 240 IEPSSVNIYADEDLVKSTSIQCAVKSIEDHGATLDVGLPGFTGFIAKKDFGNFEKLLPGA 299
Query: 286 VFLATVTKRSGRTVNVNLDLASKNTKVEKISSIDAIVPGQSIDFLPQTITNHGVIGKAFG 345
VFL +TK+S R++ VN D + K K+ +ISSIDAI+PGQ +D L ++IT +G+ GK FG
Sbjct: 300 VFLGNITKKSDRSIVVNTDFSDKKNKITQISSIDAIIPGQIVDLLCESITKNGIAGKVFG 359
Query: 346 LITAFLPLPHSNFFTVEDLKHHYSIGDLVNARILATTIVKSGDKVAVVSTQPHIISLHPK 405
L++ + + H F+ EDLKH + IG + RI+A KSGDKV ++S PHI+ L
Sbjct: 360 LVSGVVNVSHLRTFSEEDLKHKFVIGSSIRCRIIACLENKSGDKVLILSNLPHILKLEDA 419
Query: 406 LQETEALESFPVGYIFDSCTVKGRDSQFFYVSINNEQVGQIHLSKAGETEPTGTVKARIL 465
L+ TE L++FP+GY F+SC++KGRDS++ Y++++++++G++H S+ GE E + + +R+L
Sbjct: 420 LRSTEGLDAFPIGYTFESCSIKGRDSEYLYLALDDDRLGKVHSSRVGEIENSENLSSRVL 479
Query: 466 GYNNVDKLYTLTSDPALLDVKYLRSSDIPAGEVLSACEIVTVSGKGIELKIFNDQFKAFV 525
GY+ VD +Y L++DP L +KYLR++DIP GE+L +CEI +VS GIELKIFN QFKA V
Sbjct: 480 GYSPVDDIYQLSTDPKYLKLKYLRTNDIPIGELLPSCEITSVSSSGIELKIFNGQFKASV 539
Query: 526 PPLHISDTRLVYPERKFKIGSKVKGRVLNVDSVGRVTVTLKKSIVNADEESVTLVCKNDD 585
PPLHISDTRLVYPERKFKIGSKVKGRV++V+S G V VTLKKS+VN ++ + LV ++
Sbjct: 540 PPLHISDTRLVYPERKFKIGSKVKGRVISVNSRGNVHVTLKKSLVNIEDNELPLVSTYEN 599
Query: 586 IQTVESQELKTIGTVEIFKPNGCVISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVLV 645
+ ++ + KT+ T+++FKPNGC+ISFF + F+PN EISE FVK+P+EHLRLGQ+V+V
Sbjct: 600 AKNIKEKNEKTLATIQVFKPNGCIISFFGGLSGFLPNSEISEVFVKRPEEHLRLGQTVIV 659
Query: 646 KILNHDFERNRIIASCKISAESSSKQKSAIESLVVGKSIIDAIVIEKTKDSVIVESKDSG 705
K+L+ D +R RIIA+CK+S E +++QK IE++V G++II VIEKTKDSVIVE D G
Sbjct: 660 KLLDVDADRRRIIATCKVSNEQAAQQKDTIENIVPGRTIITVHVIEKTKDSVIVEIPDVG 719
Query: 706 LRGVIYTGHLSDDRIEQNRASQKKLKINSEVRGLVLDKDIRTHVFNMSCKKSLIKDAEDG 765
LRGVIY GHLSD RIEQNRA KKL+I +E+ GLV+DKD RT VFNMS K SLIKDA+
Sbjct: 720 LRGVIYVGHLSDSRIEQNRAQLKKLRIGTELTGLVIDKDTRTRVFNMSLKSSLIKDAKKE 779
Query: 766 TLPLSFSDIKNKDKTEPMHGYVKSVSDRGVFVAFNGKFVGLVLPSYAAETRDIDIHKKYY 825
TLPL++ D+K+ +K PMH Y+KS+SD+G+FVAFNGKF+GLVLPSYA ++RDIDI K +Y
Sbjct: 780 TLPLTYDDVKDLNKDVPMHAYIKSISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFY 839
Query: 826 INQSVTVYLLRTDEEHERFLLTIL--KQKTDVKKINSSVINPVDKSIKDLSDFTIGKVTK 883
INQSVTVYLLRTD+++++FLL++ K K + KK+ S++ +PVD SIK D +IG + K
Sbjct: 840 INQSVTVYLLRTDDKNQKFLLSLKAPKVKEEKKKVESNIEDPVDSSIKSWDDLSIGSIVK 899
Query: 884 ATITSVKKNQLNVTLADNVHGRISISEVFDSFEDIKEQKAPLSVYKKNDSLSVRVIGFHD 943
A I SVKKNQLNV LA N+HGR+ I+EVFD++E+I ++K PLS YKK+D + V++IG HD
Sbjct: 900 AKIKSVKKNQLNVILAANLHGRVDIAEVFDTYEEITDKKQPLSNYKKDDVIKVKIIGNHD 959
Query: 944 IKSRKFLPISHTTSKSHLVELSAKPSSLTS-PVSEKKLKDFTPEQTTFGFINNYSNDTAW 1002
+KS KFLPI+H SK+ ++ELS KPS L S V K L++ Q GF+NN S + W
Sbjct: 960 VKSHKFLPITHKISKASVLELSMKPSELKSKEVHTKSLEEINIGQELTGFVNNSSGNHLW 1019
Query: 1003 LTITPTVKAKLPIFEISDEGHDFSLPIEEKYPIGTAVRVTVKSIDTEHDSLVVSARSHAI 1062
LTI+P +KA++ + +++D +FS IE +P+G+A++V V SID EH + +SH
Sbjct: 1020 LTISPVLKARISLLDLADNDSNFSENIESVFPLGSALQVKVASIDREHGFVNAIGKSHVD 1079
Query: 1063 SSISEIKEGDVLPARVISVQDTYVLLSLGKDVTGVSFITDALDDYSLSLKDVYDSKKKNI 1122
++S IK GD LP RV+ + + YVLL LG VTG+SFITDAL+D+SL+LK+ ++ K N+
Sbjct: 1080 INMSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLTLKEAFEDKINNV 1139
Query: 1123 VSATVLNVDIDNNKINLSLRSSSPKDRTIISSSELKRGDIVRGFVKSITDKGVFISLSSV 1182
+ TVL+VD N KI LSLR ++ K R+I S +LK+G+IV G VK++ DKG+F+ LS
Sbjct: 1140 IPTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRK 1199
Query: 1183 LQAFVPVSKLTDAFIKDWKKFFRRGQSVVGKVVNCDNDDRVLLTLRESEVNGQLNVLKSY 1242
++AFVPVSKL+D+++K+WKKF++ Q V+GKVV CD D R+ LTLRESE+NG L VLK+Y
Sbjct: 1200 VEAFVPVSKLSDSYLKEWKKFYKPMQYVLGKVVTCDEDSRISLTLRESEINGDLKVLKTY 1259
Query: 1243 SDINVGDIFQGSVKNVTDFGVFVKLDGTVNVTGLAHKSEVADAKIDNLQNLFGEGDKVKA 1302
SDI GD+F+G++K+VTDFGVFVKLD TVNVTGLAH +E+AD K ++L LFG GD+VKA
Sbjct: 1260 SDIKAGDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVKA 1319
Query: 1303 IVLKTNPEKKQISLGLKASYFTNXXXXXXXXXXXXXXXXXGVDDLDIDMEDGQKXXXXXX 1362
IVLKTNPEKKQISL LKAS+F+ VD L+ + ED
Sbjct: 1320 IVLKTNPEKKQISLSLKASHFSKEAELASTTTTTTT-----VDQLEKEDED--------- 1365
Query: 1363 XXXXXXXXXXXXXXXXXFGHSDSEA----EDTTRPKNSAPVSTDGLSLSTGFDWTASILD 1418
F SDSE+ ++T S+DGLSLS GFDWTASILD
Sbjct: 1366 ----------EVMADAGFNDSDSESDIGDQNTEVADRKPETSSDGLSLSAGFDWTASILD 1415
Query: 1419 QAQXXXXXXXXXXXFI--XXXXXXXXXXXXXXXXTVDINTRIPESVGDFERLIMGNPNSS 1476
QAQ F T+DINTR PESV DFERL++GNPNSS
Sbjct: 1416 QAQEEEESDQDQEDFTENKKHKHKRRKENVVQDKTIDINTRAPESVADFERLLIGNPNSS 1475
Query: 1477 VVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNIWIASLNLENTFGTEETVED 1536
VVWMNYMAF LQLSE+EKARE+ ERALKTINFREE+EKLNIWIA LNLENTFGTEET+E+
Sbjct: 1476 VVWMNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEE 1535
Query: 1537 VFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKKFGSEKVSIWVAWGEFLIDN 1596
VF++ACQYMDS+T+H KLL IY++SEK +KA ELFK TAKKFG EKVSIWV+WG+FLI +
Sbjct: 1536 VFSRACQYMDSYTIHTKLLGIYEISEKFDKAAELFKATAKKFGGEKVSIWVSWGDFLISH 1595
Query: 1597 NLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDPEQGRSLFEGLLADAPKRVDLW 1656
N EA +LGN+LK+LP RNHIEVVRKFAQLEF+KGDPE+GRSLFEGL+ADAPKR+DLW
Sbjct: 1596 NEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVADAPKRIDLW 1655
Query: 1657 NVYIDQEIKHGEKSKAEDLFERVITKKITRKQAKFFFNKWLQFEEQKDDQK 1707
NVY+DQE+K +K K EDLFER+ITKKITRKQAKFFFNKWLQFEE + D+K
Sbjct: 1656 NVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWLQFEESEGDEK 1706
>SPCC1183.07 [A] KOG1070 rRNA processing protein Rrp5
Length = 1690
Score = 878 bits (2269), Expect = 0.0
Identities = 569/1740 (32%), Positives = 922/1740 (52%), Gaps = 111/1740 (6%)
Query: 6 SKRKRDDESPLVRQDATEAPAKSALSKSEEIS-FPRGGSSALSPLEVKQVGNEVVADVLF 64
+KRKR + S D+ S+LS +E FPRGG+S+L+PLE K+ E D +
Sbjct: 4 NKRKRSNASE--GSDSQGNERISSLSANEATQDFPRGGASSLTPLEYKEAVLEAKKDFM- 60
Query: 65 GKDESATGAEGPTXXXXXXXXXXFDQIXXXXXXXXXXXXXLIEHFGMKQMTKGTIVLGQI 124
ESA+G + I+ K +T G+++LGQI
Sbjct: 61 ---ESASGT-AELSKKTRPKKKGSKKSSKSELDNEENLKVHIQSLRYKNITPGSLILGQI 116
Query: 125 QSISKHELKISLVDGLHGYVSLTDISEQMTKILENLXXXXXXXXXXXXXXXXXXXXXXXX 184
I+ +L +SL + L GYV +T+IS++++ L+++
Sbjct: 117 AQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAEDNAATEEEDGL-------- 168
Query: 185 ITTPKELPDLNKYFKIGQWLRCMVQNNSALESNKNKK--LDLSIEPSVVN--VFEDDDLA 240
++PDL +K+GQW+R V + + K K ++LS++P N E D
Sbjct: 169 ----NQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAPEAADFV 224
Query: 241 KNCPLQCSLKSIEDHGAILDIGIENLTGFISKKDIPEFSSLLPGMVFLATVTKRSGRTVN 300
+Q + SIEDHG + DIGI N TGF+SKK I +F + G L +V + R +
Sbjct: 225 AGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHINDFP-FVEGQSLLCSVISKEDRIFH 283
Query: 301 VNLDLASKNTKVEKISSIDAIVPGQSIDFLPQTITNHGVIGKAFGLITAFLPLPHSNFFT 360
++L A+ +E + S+ AI+PG I+ L I GVI K G++ + HS+
Sbjct: 284 LSLT-ATSTKALEVMPSVQAILPGDYINVLVTDIKESGVIAKYMGVVDVTSDIYHSSPVK 342
Query: 361 VEDLKHHYSIGDLVNARILATTIVKSGDKVAV-VSTQPHIISLHPKLQETEALESFPVGY 419
EDL+ + + V AR+L V GD + VS PH+++ + T + +G+
Sbjct: 343 GEDLEDKFQLAKSVPARVL---FVIPGDPPKIAVSFLPHVLTFNFATPNTPHPDQLDIGF 399
Query: 420 IFDSCTVKGRDSQF-FYVSINNEQV-GQIHLSKAGETEPTG------------TVKARIL 465
I ++ V S + + ++ G H+S+ + + G T +ARI+
Sbjct: 400 IVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPYKVDSTHEARII 459
Query: 466 GYNNVDKLYTLTSDPALLDVKYLRSSDIPAGEVLSACEIVTVSGKGIELKIFNDQFKAFV 525
Y+ VD LY L+ ++L+ ++LR DI G+ + I + +GI + I ++ V
Sbjct: 460 NYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGT-IAKLIPQGIVVTI-SEGINGLV 517
Query: 526 PPLHISDTRLVYPERKFKIGSKVKGRVLNVDSVG-RVTVTLKKSIVNADEESVTLVCKND 584
P H++D L +PER+FK+GS VK RVL+ + + RV +TLKKS++N D L D
Sbjct: 518 PSTHMADIALQFPERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTD-----LPLIYD 572
Query: 585 DIQTVESQELKTIGTVEIFKPNGCVISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVL 644
Q + T+GT+ +G ++ F+N+++AF+P E+SEA+++ +EH ++GQ++
Sbjct: 573 YEQATPGTQ--TVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQTLS 630
Query: 645 VKILNHDFERNRIIASCKISAESSSKQKSAIESLVVGKSIIDAIVIEKTKDSVIVESKDS 704
V I++ D E ++ C+ +K+ E++ G S++ IV++KT+DSVIV+ D
Sbjct: 631 VTIVSCDPENRKMRVGCR-EQSWDAKRLERFENIKAG-SVLSGIVLQKTEDSVIVDLGDK 688
Query: 705 GLRGVIYTGHLSDDRIEQNRASQKKLKINSEVRG-LVLDKDIRTHVFNMSCKKSLIKDAE 763
+ GVI G L D + + KL+ ++++ LVL KD + ++S KKSL++ A+
Sbjct: 689 -VTGVITLGQLCDGDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAK 747
Query: 764 DGTLPLSFSDIKNKDKTEPMHGYVKSVSDRGVFVAFNGKFVGLVLPSYAAETRDIDIHKK 823
+ +P++ +D+K K G+V++ + GVFV F V LV +Y +E
Sbjct: 748 ENRMPINITDLKEGIK---YFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAV 804
Query: 824 YYINQSVTVYLLRTDEEHERFLLTIL----KQKTDVKKINSS--VINPVDKSIKDLSDFT 877
Y QSVT L + E+ ++ KQ+ V+ + S + NPVD++IK D+
Sbjct: 805 YKPQQSVTCVCLSVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYV 864
Query: 878 IGKVTKATITSVKKNQLNVTLADNVHGRISISEVFDSFEDIKEQKAPLSVYKKNDSLSVR 937
GK+T A +TS K +QLNV LA NVHGR+ +SEVFD+F +I + PL + K D + VR
Sbjct: 865 AGKITWAVVTSAKASQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVR 924
Query: 938 VIGFHDIKSRKFLPISHTTSKSHLVELSAKPSSLTSPVSEKKLKDFTPEQTTFGFINNYS 997
V+G HD ++ KFLPISH S +ELS +PS L K F GF+NN S
Sbjct: 925 VLGIHDSRNHKFLPISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVS 984
Query: 998 NDTAWLTITPTVKAKLPIFEISDEGHDFSLPIEEKYPIGTAVRVTVKSIDTEHDSLVVSA 1057
+ W+++TP+V ++PI +++ + + + +++ + +G A++ V + + DS+ +SA
Sbjct: 985 KECVWVSLTPSVNGRIPILDLTTDVKELN-SLQKHFFLGKAIKCYVVNAE---DSITLSA 1040
Query: 1058 RSHAISSISEIKEGDVLPARVISVQDTYVLLSLGKDVTGVSFITDALDDYSLSLKDVYDS 1117
+ + G L +V +V + +L L ++G D DDY + + +
Sbjct: 1041 IG-PLQGFENLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDMFDDYDILPETKF-- 1097
Query: 1118 KKKNIVSATVLNVDIDNNKINLSLRSSSP-------KDRTIISSSELKRGDIVRGFVKSI 1170
+ N+V VL+VD+ N K+ LS R+S KD+ I S +LK GDI RGFV ++
Sbjct: 1098 TRNNLVGVCVLSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGFVCNV 1157
Query: 1171 TDKGVFISLSSVLQAFVPVSKLTDAFIKDWKKFFRRGQSVVGKVVNCDNDD-RVLLTLRE 1229
++G+F+++ L A V + +L D FIKDWK F Q V G +V DND R+ ++L++
Sbjct: 1158 ANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFHVNQLVKGSIVGIDNDSKRIEMSLKQ 1217
Query: 1230 SEVNGQLNVLKSYSDINVGDIFQGSVKNVTDFGVFVKLDGTVNVTGLAHKSEVADAKIDN 1289
S++ + K+++DI VG G+V V D+GV +++DGT N+ GL HKSE+ADA + N
Sbjct: 1218 SKIKDSSEITKTFADIAVGSNLDGTVVKVGDYGVLIRIDGTDNIVGLCHKSEIADAVVLN 1277
Query: 1290 LQNLFGEGDKVKAIVLKTNPEKKQISLGLKASYFTNXXXXXXXXXXXXXXXXXGVDDLDI 1349
+ L+ GDKV+A VL + EK++I+LGLK+SYF + +D+++
Sbjct: 1278 ISKLYSSGDKVRAHVLDVDSEKRRIALGLKSSYFDS---------DSDISMSDNEEDVEM 1328
Query: 1350 DMEDGQKXXXXXXXXXXXXXXXXXXXXXXXFGHSDSEAEDTTRPKNSAPVSTDGLSLSTG 1409
ED Q G D E E + N G
Sbjct: 1329 RSED-QSDTSESEVGSKDDVQSEEVENLESAGDEDEEEEPSALQAN-------------G 1374
Query: 1410 FDWT--ASILDQAQXXXXXXXXXXXFIXXXXXXXXXXXXXXXXTVDINTRIPESVGDFER 1467
FDWT +++ D+ +D IP + DFER
Sbjct: 1375 FDWTDGSTVFDKLADDTEDSEDEEDEEPKRKKSKSDRFDDEEKDLD---EIPSTAADFER 1431
Query: 1468 LIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNIWIASLNLENT 1527
++ +PNSS++W++YMA+HL L+E+++ARE+ +RAL TIN+REE EKLN+W+A LNLE
Sbjct: 1432 QLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEVA 1491
Query: 1528 FGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKKFGSEKVSIWV 1587
+GTE+++++VF +AC Y D+ ++ KL I K++ A E ++ K F + S+W+
Sbjct: 1492 YGTEDSLKEVFKEACAYCDALIVYEKLCGILIKGGKVDLADEYMQLMLKNF-KQVPSVWI 1550
Query: 1588 AWGEFLIDNNLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDPEQGRSLFEGLLA 1647
+ FL++N+ ++AH +L SL+SLP H+ ++ KFA LEF GDPE+GR++FEGLL+
Sbjct: 1551 QYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKFAILEFKNGDPERGRTIFEGLLS 1610
Query: 1648 DAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITKKITRKQAKFFFNKWLQFEEQKDDQK 1707
PKR+DLWNV ID E+K + S LF+R++ ++ K+AKF F KWL +E+ D +
Sbjct: 1611 SYPKRLDLWNVLIDMEMKQDDPSIVRRLFQRLLALNLSTKKAKFAFKKWLAYEKNIGDDE 1670
>Hs20544347 [A] KOG1070 rRNA processing protein Rrp5
Length = 1871
Score = 374 bits (959), Expect = e-102
Identities = 394/1501 (26%), Positives = 648/1501 (42%), Gaps = 215/1501 (14%)
Query: 321 IVPGQSIDFLPQTITNHGVIGKAFGLITAFLPLPHSNFFTVEDLKHHYSIGDLVNARIL- 379
I PG + TI ++G++ K + +P H +++ + Y IGD V R+L
Sbjct: 450 IEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVLL 509
Query: 380 ----ATTIVKSGDKVAVVSTQPHIISLHPKLQETEALESFPVGYIFDSCTVKGRDSQFFY 435
A ++ + K + S P +I+ + + F + C VK FY
Sbjct: 510 CDPEAKKLMMTLKKTLIESKLP-VITCYADAKPGLQTHGFIIRVKDYGCIVK------FY 562
Query: 436 VSINNEQ--VGQIHLSKAGETEPTGTVKARILGYNNVDKLYTLTSDPA----LLDVKYLR 489
NN Q V + LS +P R+ V K+ L +P+ LL K L
Sbjct: 563 ---NNVQGLVPKHELSTEYIPDPE-----RVFYTGQVVKVVVLNCEPSKERMLLSFK-LS 613
Query: 490 SSDIPA----------GEVLSACEIVTV-----SGKGIELKIFNDQFKAFVPPLHISDTR 534
S P G+ ++ ++V V + G+E+ + +AF+P H+SD
Sbjct: 614 SDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHV 673
Query: 535 LVYPERKFKI-GSKVKGRVLNVD-SVGRVTVTLKKSIVNADEESVTLVCKNDDIQTVESQ 592
P + + RVL + S GRV + K ++V+ E D E
Sbjct: 674 ANGPLLHHWLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGG------QDPKNFSEIH 727
Query: 593 E-LKTIGTVEIFKPNGCVISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVLVKILNHD 651
+ IG V+ K G I F + + P +S+ FV +H GQ+V K+ N D
Sbjct: 728 PGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVD 787
Query: 652 FERNRIIASCKIS--------------AESSSKQKSAIESLVVGK-SIIDAIVIEKTK-- 694
E+ R++ S ++S ++ + SL+ + S++ + E T
Sbjct: 788 EEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAEMTPGM 847
Query: 695 --DSVIVESKDSGLRGVIYTGHLSDDRI----------EQNRASQKKLKINSEVRGLVLD 742
D V+ E + G V+++G D + ++ + QKK + V L L+
Sbjct: 848 FLDLVVQEVLEDG--SVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVDLLKLE 905
Query: 743 KDIRTH--VFNMSCKKSLIKDAEDGTLPLSFSDIKNKDKTEPMHGYVKSVSDRGVFVAFN 800
+ H + N +K L K +E + +++ +K+ + S+ + G AF+
Sbjct: 906 VHVSLHQDLVNRKARK-LRKGSEHQAI------VQHLEKSFA----IASLVETGHLAAFS 954
Query: 801 GKFVGLVLPSYAAETRDIDIHKKYYINQSVTVYLLRTDEEHERFLLTI----LKQKTDVK 856
L S+ +T D +K + Q V++ L T+ LL + K+
Sbjct: 955 -------LTSHLNDTFRFD-SEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPT 1006
Query: 857 KINSSVINPVDKSIKDLS-------DFTIGKVTKATITSVKKNQLNVTLADNVHGRISIS 909
+ +S ++ ++ L+ +IG + T+ S+K + VTL D + G I S
Sbjct: 1007 QKDSETVDEDEEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHAS 1066
Query: 910 EVFDSFEDIKEQKAPLSVYKKNDSLSVRVIGFHDIKSRKFLPISHTTSKSHLVELSAKPS 969
+ D D+ E +P + K +++ RVIG D+K+ K+LPISH + ELS +PS
Sbjct: 1067 HILD---DVPEGTSPTTKLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPS 1123
Query: 970 SL--------TSPVSE-KKLKDFTPEQTTFGFINNYSNDTAWLT--ITPTVKAKLPIFEI 1018
L T VS +K+K + QT F+ Y+ WL I P ++ ++P+
Sbjct: 1124 ELEDGHTALNTHSVSPMEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLT 1183
Query: 1019 SDEGHDFSLPIEEKYPIGTAVRVTVKSIDTEHDSLVVSARSHAISSISEIKEGDVLPARV 1078
S P ++K+ +G A+R TV D+ L +S ++ +++EG+V RV
Sbjct: 1184 SLSFKVLKHP-DKKFRVGQALRATVVGPDSSKTLLCLS-----LTGPHKLEEGEVAMGRV 1237
Query: 1079 ISV---QDTYVLLSLGKDVTGVSFITDALDDYSLSLKDVYDSKKKNIVSATVLNVDIDNN 1135
+ V + V GK G I D YS + + D + + +L+ +N
Sbjct: 1238 VKVTPNEGLTVSFPFGK--IGTVSIFHMSDSYSET--PLEDFVPQKVFRCYILSTA--DN 1291
Query: 1136 KINLSLRSSSPKDRT--------IISSSELKRGDIVRGFVKSITDKGVFISLSSVLQAFV 1187
+ LSLRSS T I S ++K G ++RG+V SI GVF L +
Sbjct: 1292 VLTLSLRSSRTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGLA 1351
Query: 1188 PVSKLTDAFIKDWKKFFRRGQSVVGKVVNCDNDDRVLLTLRESEVNGQLNVLKSYSDINV 1247
S ++ KK GK LLT R +N Q N+++
Sbjct: 1352 RYSHVSQH--SPSKKALYNKHLPEGK----------LLTARVLRLNHQKNLVE--LSFLP 1397
Query: 1248 GDIFQGSVKNVTDFGVFVKL-DGTVNVTGLAHKSEVADAKIDNLQNLFGEGDKVKAIVLK 1306
GD + V + + G K + K E + K + +N G+ + K
Sbjct: 1398 GDTGKPDVLSASLEGQLTKQEERKTEAEERDQKGEKKNQKRNEKKNQKGQEEVEMPSKEK 1457
Query: 1307 TNPEKKQISLGLKASYFTNXXXXXXXXXXXXXXXXXGVDDLDIDMEDGQKXXXXXXXXXX 1366
P+K Q K G+ + D + D
Sbjct: 1458 QQPQKPQAQ---KRGGRECRESGSEQERVSKKPKKAGLSEEDDSLVD------------- 1501
Query: 1367 XXXXXXXXXXXXXFGHSDSEAEDTT---RPKNSAPVSTDGLSLSTGFDW-------TASI 1416
+ EAE+T + K + P L LS+GF W T ++
Sbjct: 1502 -----------VYYREGKEEAEETNVLPKEKQTKPAEAPRLQLSSGFAWNVGLDSLTPAL 1550
Query: 1417 LDQAQXXXXXXXXXXXFIXXXXXXXXXXXXXXXXTVDINTRIPESVGD----------FE 1466
A+ ++ +RI E++ D F+
Sbjct: 1551 PPLAESSDSEEDEKPHQATIKKSKKERELEKQKAEKEL-SRIEEALMDPGRQPESADDFD 1609
Query: 1467 RLIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNIWIASLNLEN 1526
RL++ +PNSS++W+ YMAFHLQ +E+EKAR + ERALKTI+FREE EKLN+W+A LNLEN
Sbjct: 1610 RLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLEN 1669
Query: 1527 TFGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKKFGSEKVSIW 1586
+G++E++ VF +A QY + + + L IY SEK ++A EL+ K+F EK ++W
Sbjct: 1670 MYGSQESLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEK-AVW 1728
Query: 1587 VAWGEFLIDNNLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDPEQGRSLFEGLL 1646
+ +G FL+ + +H VL +L+ LP++ H++V+ KFAQLEF GD E+ +++FE L
Sbjct: 1729 IKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTL 1788
Query: 1647 ADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITKKITRKQAKFFFNKWLQFEEQKDDQ 1706
+ PKR D+W+VYID IKHG + D+FERVI + K+ KFFF ++L +E+Q +
Sbjct: 1789 STYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTE 1848
Query: 1707 K 1707
K
Sbjct: 1849 K 1849
Score = 232 bits (592), Expect = 3e-60
Identities = 323/1400 (23%), Positives = 569/1400 (40%), Gaps = 219/1400 (15%)
Query: 35 EISFPRGGSSALSPLEVKQVGNEVVADVLF------GKDESATGAEGPTXXXXXXXXXXF 88
E SFPRGG+ + E K V D LF G + +GP
Sbjct: 5 EESFPRGGTRKIHKPE-KAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTK-------- 55
Query: 89 DQIXXXXXXXXXXXXXLIEHFGMKQMTKGTIVLGQIQSISKHELKISLVDGLHGYVSLTD 148
++ E ++ + +G +LG ++ +++ EL ISL +GL G+V +T+
Sbjct: 56 -KLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTE 114
Query: 149 ISEQMTKILENLXXXXXXXXXXXXXXXXXXXXXXXXITTPKELPDLNKYFKIGQWLRCMV 208
I + TK L K+L L + F G +RC+V
Sbjct: 115 ICDAYTKKLNEQVTQEQPL---------------------KDLLHLPELFSPGMLVRCVV 153
Query: 209 QNNSALESNKNKKLDLSIEPSVVN-VFEDDDLAKNCPLQCSLKSIEDHGAILDIGIENLT 267
+ + K K + LS+ P VN V + L L ++ S+EDHG ++DIG++
Sbjct: 154 SSLGITDRGK-KSVKLSLNPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTR 212
Query: 268 GFISKKDIPEF-------SSLLPGMVFLATVTKRSGRTVNVNLDLASKNTKV-----EKI 315
F+ E+ + L G V K G V+L + ++
Sbjct: 213 AFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQS 272
Query: 316 SSIDAIVPGQSIDFLPQTITNHGVIGKAFGLITAFLPLPHSNFFT-VEDLKH-------H 367
+++ ++PG + Q +T FGL FL FFT V D H
Sbjct: 273 WNLNNLLPGLVVKAQVQKVT-------PFGLTLNFL-----TFFTGVVDFMHLDPKKAGT 320
Query: 368 YSIGDLVNARILATTIVKSGDKVAVVSTQPHIISLHPKLQETEALESFPVGYIFDSCTVK 427
Y V A IL V +V +S +P I L P T L +G + D V+
Sbjct: 321 YFSNQAVRACILC---VHPRTRVVHLSLRP--IFLQPGRPLTR-LSCQNLGAVLDDVPVQ 374
Query: 428 G-----------RDSQFFYVSINNEQVGQIHLSKAGET------EPTGTVKARILGYNNV 470
G +D Y ++ HLS + +P T K RI+ Y+ +
Sbjct: 375 GFFKKAGATFRLKDGVLAYARLS-------HLSDSKNVFNPEAFKPGNTHKCRIIDYSQM 427
Query: 471 DKLYTLTSDPALLDVKYLRSSDIPAGEVLSACEIVTVSGKGIELKIFNDQFKAFVPPLHI 530
D+L L+ ++++ +YLR DI G V+ ++T+ G+ +K+ +Q + VPP+H+
Sbjct: 428 DELALLSLRTSIIEAQYLRYHDIEPGAVVKG-TVLTIKSYGMLVKV-GEQMRGLVPPMHL 485
Query: 531 SDTRLVYPERKFKIGSKVKGRVLNVD-SVGRVTVTLKKSIVNADEESVTLVCKNDDIQTV 589
+D + PE+K+ IG +VK RVL D ++ +TLKK+++ + +T C D
Sbjct: 486 ADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVIT--CYAD----- 538
Query: 590 ESQELKTIGTVEIFKPNGCVISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVLVKILN 649
L+T G + K GC++ F+NN++ VP E+S ++ P+ GQ V V +LN
Sbjct: 539 AKPGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLN 598
Query: 650 HDFERNRIIASCKISAESSSKQKSAIESLVVGKSI-----IDAIVIEKTKDSVIVESKDS 704
+ + R++ S K+S++ K++ A S GK+I +D V+EKTKD + V
Sbjct: 599 CEPSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPH 658
Query: 705 GLRGVIYTGHLSDDRIEQNRASQKKLKINSEVRGLVLDKDIRTHVFNMSCKK-SLIKDAE 763
+R + T HLS D + L+ + ++ V + C+K +L+ E
Sbjct: 659 NIRAFLPTSHLS-DHVANGPLLHHWLQAGDILHRVLCLSQSEGRV--LLCRKPALVSTVE 715
Query: 764 DGTLPLSFSDIKNKDKTEPMHGYVKSVSDRGVFVAFNGKFVGLVLPSYAAETRDIDIHKK 823
G P +FS+I + G+VKS+ D GVF+ F GL + ++
Sbjct: 716 GGQDPKNFSEI---HPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDH 772
Query: 824 YYINQSVTVYLLRTDEEHERFLLT-----------------ILKQ-KTDVKKINSSVINP 865
+ Q+V + DEE +R LL+ +L Q +++ + S + N
Sbjct: 773 FVEGQTVAAKVTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNR 832
Query: 866 VDKSIKDLSDFTIGKVTKATITSVKKNQLNVTLADNVHGRI-SISEVFDSFEDIKEQKAP 924
I+ L++ T G + V ++ V V + S + ++++ +
Sbjct: 833 DSVLIQTLAEMTPGMFLDLVVQEVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKK 892
Query: 925 LSVYKKNDSLSVRV-IGFH-DIKSRKFLPISHTTSKSHLVELSAKPSSLTSPVSEKKLKD 982
V D L + V + H D+ +RK + + +V+ K ++ S V L
Sbjct: 893 KVVILNVDLLKLEVHVSLHQDLVNRKARKLRKGSEHQAIVQHLEKSFAIASLVETGHLAA 952
Query: 983 FTPEQTTFGFINNYSNDTAWLTITPTVKAKLPIFEISDEGHDFSLPIEEKYPIGTAVRVT 1042
F+ T + + D+ L + V L E G L +E G A + T
Sbjct: 953 FS---LTSHLNDTFRFDSEKLQVGQGVSLTLKTTEPGVTG--LLLAVE-----GPAAKRT 1002
Query: 1043 VKSIDTEHDSLVVSARSHAISSISEIKE-----GDVLPARVISVQDTYVLLSLGKDVTGV 1097
++ + +++ ++ IK+ GD++ V S++ T+V+++L + G
Sbjct: 1003 MRPTQKDSETVDEDEEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGC 1062
Query: 1098 SFITDALDDYSLSLKDVYDSKKKNIVSATVLN---------------------------- 1129
+ LDD K V+A V+
Sbjct: 1063 IHASHILDDVPEGTSPTTKLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRP 1122
Query: 1130 VDIDNNKINLSLRSSSPKDRTIISSSELKRGDIVRGFVK--SITDKGVFISLSSVLQAFV 1187
++++ L+ S SP ++ + + G V F+K ++ K + + ++ ++ +
Sbjct: 1123 SELEDGHTALNTHSVSPMEKI----KQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRI 1178
Query: 1188 P--VSKLTDAFIKDWKKFFRRGQSVVGKVVNCDNDDRVLLTLRESEVNGQLNVLKSYSDI 1245
P ++ L+ +K K FR GQ++ VV D+ + LL L L +
Sbjct: 1179 PLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDS-SKTLLCLS----------LTGPHKL 1227
Query: 1246 NVGDIFQGSVKNVT-DFGVFVKLD-GTVNVTGLAHKSE-VADAKIDNL--QNLF-----G 1295
G++ G V VT + G+ V G + + H S+ ++ +++ Q +F
Sbjct: 1228 EEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVFRCYILS 1287
Query: 1296 EGDKVKAIVL---KTNPEKK 1312
D V + L +TNPE K
Sbjct: 1288 TADNVLTLSLRSSRTNPETK 1307
Score = 80.9 bits (198), Expect = 2e-14
Identities = 53/184 (28%), Positives = 97/184 (51%), Gaps = 4/184 (2%)
Query: 1139 LSLRSSSPKDRTIISSSELKRGDIVRGFVKSITDKGVFISLSSVLQAFVPVSKLTDAFIK 1198
LSLR+S + + + +++ G +V+G V +I G+ + + ++ VP L D +K
Sbjct: 433 LSLRTSIIEAQ-YLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMK 491
Query: 1199 DWKKFFRRGQSVVGKVVNCDND-DRVLLTLRESEVNGQLNVLKSYSDINVGDIFQGSVKN 1257
+ +K + G V +V+ CD + ++++TL+++ + +L V+ Y+D G G +
Sbjct: 492 NPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIR 551
Query: 1258 VTDFGVFVKLDGTVNVTGLAHKSEVADAKIDNLQNLFGEGDKVKAIVLKTNPEKKQISLG 1317
V D+G VK NV GL K E++ I + + +F G VK +VL P K+++ L
Sbjct: 552 VKDYGCIVKFYN--NVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLS 609
Query: 1318 LKAS 1321
K S
Sbjct: 610 FKLS 613
>At3g11964 [A] KOG1070 rRNA processing protein Rrp5
Length = 1838
Score = 212 bits (539), Expect = 5e-54
Identities = 113/252 (44%), Positives = 162/252 (63%), Gaps = 6/252 (2%)
Query: 1459 PESVGDFERLIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNIW 1518
PE+ +FE+L+ +PNSS VW+ YMAF L L+++EKAR I ERAL+TIN REE EKLNIW
Sbjct: 1572 PENADEFEKLVRSSPNSSFVWIKYMAFMLSLADIEKARSIAERALRTINIREEEEKLNIW 1631
Query: 1519 IASLNLENTFGT--EETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAK 1576
+A NLEN G EE+V+ VF +A QY D +++ LL +Y+ +E+ + A +L K
Sbjct: 1632 VAYFNLENEHGNPPEESVKKVFERARQYCDPKKVYLALLGVYERTEQYKLADKLLDEMIK 1691
Query: 1577 KFGSEKVSIWVAWGEFLIDNNLIDEA-HEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDP 1635
KF + IW+ + + N +EA V+ +L LP HI+ + + A LEF G
Sbjct: 1692 KF-KQSCKIWLRKIQSSLKQN--EEAIQSVVNRALLCLPRHKHIKFISQTAILEFKCGVA 1748
Query: 1636 EQGRSLFEGLLADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITKKITRKQAKFFFNK 1695
++GRSLFEG+L + PKR DLW+VY+DQEI+ GE LFER I+ + K+ KF F K
Sbjct: 1749 DRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGEDDVIRSLFERAISLSLPPKKMKFLFKK 1808
Query: 1696 WLQFEEQKDDQK 1707
+L++E+ D++
Sbjct: 1809 FLEYEKSVGDEE 1820
Score = 205 bits (521), Expect = 6e-52
Identities = 257/1153 (22%), Positives = 488/1153 (42%), Gaps = 151/1153 (13%)
Query: 248 SLKSIEDHGAILDIGIENLTGFIS-KKDIPEFSSLLPGMVFLATVTK--RSGRTVNVNLD 304
++KSIEDHG+IL G+ ++TGFI D + S + G + VTK R + V+++ D
Sbjct: 174 NVKSIEDHGSILHFGLPSITGFIEISDDGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSD 233
Query: 305 ---LASKNTKVEKISSIDAIVPGQSIDFLPQTITNHGVIGKAFGLITAFLPLPH-SNFFT 360
+A TK S D ++PG ++ Q++ +G++ + L H N +
Sbjct: 234 PDSVAKCLTKDLSGMSFDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLS 293
Query: 361 VEDLKHHYSIGDLVNARILATTIVKSGDKVAVVSTQPHIISLHPKLQETEALESFPVGYI 420
+ K Y+ VNARIL + + ++ PH++ + L F G I
Sbjct: 294 NKSWKDEYNQNKTVNARIL---FIDPSSRAVGLTLSPHVVC-----NKAPPLHVFS-GDI 344
Query: 421 FDSCTVKGRDSQFFYVSINNEQVGQIHLSKAGETEPTGTVKARILGYNNVDKLYTLTSDP 480
FD V D + + ++ E ++ R+LG ++ L T
Sbjct: 345 FDEAKVVRIDKSGLLLELPSKPTPTPAYVSFKEGNH---IRVRVLGLKQMEGLAVGTLKE 401
Query: 481 ALLDVKYLRSSDIPAGEVLSACEIVTVSGKGIELKIFNDQFKAFVPPLHISDTRLVYPER 540
+ + SD+ G V A ++++V G ++ F+ KA P H+S+ + P +
Sbjct: 402 SAFEGPVFTHSDVKPGMVTKA-KVISVDTFGAIVQ-FSGGLKAMCPLRHMSEFEVTKPRK 459
Query: 541 KFKIGSKVKGRVLNVDSVGRVTVTLKKSIVNADEESVTLVCKNDDIQTVESQELKTIGTV 600
KFK+G+++ RVL S R+TVT KK++V + ++ T ++ L T G +
Sbjct: 460 KFKVGAELVFRVLGCKSK-RITVTYKKTLVKSKLPILSSY-------TDATEGLVTHGWI 511
Query: 601 EIFKPNGCVISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVLVKILNHDFERNRIIAS 660
+ +GC + F+N ++ FVP E+ P +G+ +
Sbjct: 512 TKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGE----------------VVK 555
Query: 661 CKISAESSSKQKSAIESLVVGKSIIDAIVIEKTKDSVIVESKD-SGLRGVIYTGHLSDDR 719
C++++ Q+ + + SI+ I+ T +VIV K S ++G I HL+D
Sbjct: 556 CRVTSAVHGTQRITLNDSIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHH 615
Query: 720 IEQNRASQKKLKINSEVRGLVLDK----DIRTHVFNMSCKKSLIKDAEDGTLPLSFSDIK 775
Q KL ++ G LDK DI + +S K SLIK AE+ LP F+ ++
Sbjct: 616 ------EQAKLIMSLLRPGYELDKLLVLDIEGNNMALSSKYSLIKLAEE--LPSDFNQLQ 667
Query: 776 NKDKTEPMHGYVKSVSDRGVFVAFNGKFVGLVLPSYAAETRDIDIHKKYYINQSVTVYLL 835
+HGYV ++ + G FV F G+ G S A + D+ + +++ QSV ++
Sbjct: 668 ---PNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANIV 724
Query: 836 RTDEEHERFLLTILKQKTDVKKINSSVINPVDKSIKDLSDFTIGKVTKATITSVKKNQLN 895
++E R L++ +++ +++S + + +SD +TK+ + V+K +
Sbjct: 725 DVNQEKSRITLSL--KQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIG 782
Query: 896 VTLADNVHGRISISEVFDSFEDIKEQKAPLSVYKKNDSLSVRVIGF---HDIKSRKFLP- 951
+ + +++ L V D+++ V+GF H + +P
Sbjct: 783 SLIKGTI-----------------QEQNDLGVVVNFDNIN-NVLGFIPQHHMGGATLVPG 824
Query: 952 ------ISHTTSKSHLVELSAKPSSLTSPVSEKKLKDFTPEQTTFGFINNYSNDTAWLTI 1005
+ + LV+LS +P L + K++ + + ++ G +
Sbjct: 825 SVVNAVVLDISRAERLVDLSLRPELLNN--LTKEVSNSSKKKRKRGISKELEVHQRVSAV 882
Query: 1006 TPTVKAKLPIFEISDEGHDF-----------SLPIEEKYPIGTAVRVTVKSIDTEHDS-- 1052
VK + + I + G+ LP+++ + G +V +VK++ S
Sbjct: 883 VEIVKEQHLVLSIPEHGYTIGYASVSDYNTQKLPVKQ-FSTGQSVVASVKAVQNPLTSGR 941
Query: 1053 ----------LVVSARSHAISSISEIKEGDVLPARVISVQDTYVLLSLGKDVTGVSFITD 1102
++RS S + G V+ A + ++ + ++ G G IT+
Sbjct: 942 LLLLLDSVSGTSETSRSKRAKKKSSCEVGSVVHAEITEIKPFELRVNFGNSFRGRIHITE 1001
Query: 1103 AL-DDYSLSLKDVYDSKKKNIVSATVL----NVDIDNNKI-NLSLRSSSPKDRTIISSS- 1155
L +D S S + + +SA V+ + DI ++ LS++ + KD + + +
Sbjct: 1002 VLVNDASTSDEPFAKFRVGQSISARVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQ 1061
Query: 1156 -----ELKRGDIVRGFVKSITDKGVFISLSSVLQA--FVPVSKLTDAFIKDWKKFFRRGQ 1208
E G V G+V + + V++++S + A F+ + ++++++ F G+
Sbjct: 1062 ESEQLEFAAGQCVIGYVYKVDKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGK 1121
Query: 1209 SVVGKVVNCDND-------DRVLLTLRESEVNGQLNVLKSYSD----------INVGDIF 1251
+V G V+ + + R LL + +S NG + I+ GDI
Sbjct: 1122 AVSGYVLTYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDIL 1181
Query: 1252 QGSVKNVTDFGVFVKLDGTVNVTGLAHKSEVADAKIDNLQNLFGEGDKVKAIVLKTNPEK 1311
G + + +++ V G H +E+ D+ + + + F EG VK VL+ +
Sbjct: 1182 GGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLDGFREGQFVKCKVLEISSSS 1241
Query: 1312 K---QISLGLKAS 1321
K QI L L+ S
Sbjct: 1242 KGTWQIELSLRTS 1254
Score = 184 bits (466), Expect = 1e-45
Identities = 200/806 (24%), Positives = 335/806 (40%), Gaps = 120/806 (14%)
Query: 606 NGCVISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVLVKILNHDFERNRIIASCKISA 665
NGC + F + F P + + E +GQSV I++ + E++RI S K S+
Sbjct: 682 NGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSS 741
Query: 666 ESSSKQKSAIESLVVGKSIIDAIVIEKTKDS---------------VIVESKDSGLRGVI 710
+S E ++ + I D + TK I E D G+ V+
Sbjct: 742 CASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGSLIKGTIQEQNDLGV--VV 799
Query: 711 YTGHLSD--DRIEQNRASQKKLKINSEVRGLVLDKDIRTHVFNMSCKKSLIKDAEDGTLP 768
++++ I Q+ L S V +VLD + ++S + L+ +
Sbjct: 800 NFDNINNVLGFIPQHHMGGATLVPGSVVNAVVLDISRAERLVDLSLRPELLNNLT----- 854
Query: 769 LSFSDIKNKDKTEPMHGYVKSVSDR----GVFVAFNGKFVGLVLPSYA-----AETRDID 819
++ N K + G K + V + + L +P + A D +
Sbjct: 855 ---KEVSNSSKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSIPEHGYTIGYASVSDYN 911
Query: 820 IHK----KYYINQSVTVYLLRTDEEHERFLLTILKQKTDVKKINSSVINPVDKSIKDLSD 875
K ++ QSV + L +L + ++ + K K S
Sbjct: 912 TQKLPVKQFSTGQSVVASVKAVQNPLTSGRLLLL-----LDSVSGTSETSRSKRAKKKSS 966
Query: 876 FTIGKVTKATITSVKKNQLNVTLADNVHGRISISEVFDSFEDIKEQKAPLSVYKKNDSLS 935
+G V A IT +K +L V ++ GRI I+EV D P + ++ S+S
Sbjct: 967 CEVGSVVHAEITEIKPFELRVNFGNSFRGRIHITEVL--VNDASTSDEPFAKFRVGQSIS 1024
Query: 936 VRVIGFHDIKSRKFLPISHTTSKSHLVELSAKPSSLT-----SPVSEKKLKDFTPEQTTF 990
RV+ P K+ L ELS KP+ L + E + +F Q
Sbjct: 1025 ARVVA---------KPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQESEQLEFAAGQCVI 1075
Query: 991 GFINNYSNDTAWLTITPTVKAKLPIFEISDEGHDFSLPIEEKYPIGTAVRVTVKSIDTE- 1049
G++ + WL ++ V A++ I + S + H+ E ++PIG AV V + + E
Sbjct: 1076 GYVYKVDKEWVWLAVSRNVTARIFILDTSCKAHELE-EFERRFPIGKAVSGYVLTYNKEK 1134
Query: 1050 -------------HDSLVVSARSHAISSISEIK---------EGDVLPARVISVQDTY-- 1085
H S+ S S I EGD+L R+ +
Sbjct: 1135 KTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILGGRISKILPGVGG 1194
Query: 1086 VLLSLGKDVTGVSFITDALDDYSLSLKDVYDSKKKNIVSATVLNVDIDNN---KINLSLR 1142
+ + LG V G T+ D + D + ++ V VL + + +I LSLR
Sbjct: 1195 LRVQLGPYVFGRVHFTEINDSWVPDPLDGF--REGQFVKCKVLEISSSSKGTWQIELSLR 1252
Query: 1143 SS----SPKDRTIISSSELKRGDIV----------------RGFVKSITDKGVFISLSSV 1182
+S S D S +LK D V +G+VK+ KG FI LS
Sbjct: 1253 TSLDGMSSADHL---SEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFIILSRT 1309
Query: 1183 LQAFVPVSKLTDAFIKDWKKFFRRGQSVVGKVVNCDN-DDRVLLTLRESEVNGQLNVLKS 1241
++A V +S L D F+K+ +K F G+ V G+V+N + R+ +TL+ G+ +S
Sbjct: 1310 VEAKVRLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGRPKS-ES 1368
Query: 1242 YS--DINVGDIFQGSVKNVTDFGVFVKLDGTVNVTGLAHKSEVADAKIDNLQNLFGEGDK 1299
Y ++VGD+ G ++ V FG+F+ +D T + GL H S+++D +++N+Q + G+
Sbjct: 1369 YDLKKLHVGDMISGRIRRVEPFGLFIDIDQT-GMVGLCHISQLSDDRMENVQARYKAGES 1427
Query: 1300 VKAIVLKTNPEKKQISLGLKASYFTN 1325
V+A +LK + EKK+ISLG+K+SY N
Sbjct: 1428 VRAKILKLDEEKKRISLGMKSSYLMN 1453
Score = 65.5 bits (158), Expect = 7e-10
Identities = 99/457 (21%), Positives = 185/457 (39%), Gaps = 77/457 (16%)
Query: 368 YSIGDLVNARILA----TTIVKSGDKVAVVSTQPHIISLHPKLQETEALESFP------- 416
+ +G ++AR++A T I K+ ++ +S +P ++ + +T+ E
Sbjct: 1017 FRVGQSISARVVAKPCHTDIKKT--QLWELSVKPAMLKDSSEFNDTQESEQLEFAAGQCV 1074
Query: 417 VGYIFDSCTVKGRDSQFFYVSINNEQVGQIHL----SKAGETE------PTG-TVKARIL 465
+GY++ D ++ +++++ +I + KA E E P G V +L
Sbjct: 1075 IGYVYKV------DKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGKAVSGYVL 1128
Query: 466 GYNNVDKLYTLTSDPALL------------------------DVKYLRSSDIPAGEVLSA 501
YN K L P L D ++ DI G +
Sbjct: 1129 TYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILGGRISKI 1188
Query: 502 CEIVTVSGKGIELKIFNDQFKAFVPPLHISDTRLVYPERKFKIGSKVKGRVLNVDSVGRV 561
+ V G ++L + F I+D+ + P F+ G VK +VL + S +
Sbjct: 1189 --LPGVGGLRVQLGPYVFGRVHFT---EINDSWVPDPLDGFREGQFVKCKVLEISSSSKG 1243
Query: 562 TVTLKKSI-------VNADEESVTL-----VCKNDDIQTVESQELKTIGTVEIFKPNGCV 609
T ++ S+ +AD S L VCK + S ++ G V+ GC
Sbjct: 1244 TWQIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCF 1303
Query: 610 ISFFNNIKAFVPNKEISEAFVKKPQEHLRLGQSVLVKILNHDFERNRIIASCK-ISAESS 668
I ++A V + + FVK+P++ +G+ V ++LN + RI + K ++A
Sbjct: 1304 IILSRTVEAKVRLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGR 1363
Query: 669 SKQKS-AIESLVVGKSIIDAIVIEKTKDSVIVESKDSGLRGVIYTGHLSDDRIEQNRASQ 727
K +S ++ L VG +I + + ++ +G+ G+ + LSDDR+E Q
Sbjct: 1364 PKSESYDLKKLHVG-DMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMEN---VQ 1419
Query: 728 KKLKINSEVRGLVLDKDIRTHVFNMSCKKSLIKDAED 764
+ K VR +L D ++ K S + + +D
Sbjct: 1420 ARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDD 1456
>CE27690 [A] KOG1070 rRNA processing protein Rrp5
Length = 1743
Score = 178 bits (451), Expect = 8e-44
Identities = 92/249 (36%), Positives = 142/249 (56%), Gaps = 1/249 (0%)
Query: 1458 IPESVGDFERLIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNI 1517
I +S D RL+ +PNS++ W+ YM+ ++ S++ AR+ E AL IN E E L I
Sbjct: 1468 IEKSEEDHSRLVRSDPNSAINWIEYMSHFIEKSDLAAARKTAEEALGAINPTESDELLKI 1527
Query: 1518 WIASLNLENTFGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKK 1577
W A LN+E +G TV+ VF +AC+ +++T+H L IYQ EK +A ++ + KK
Sbjct: 1528 WTAYLNMEVAYGDAATVQKVFERACKNANAYTVHKTLSKIYQKFEKNAEATQILEQMVKK 1587
Query: 1578 FGSEKVSIWVAWGEFLIDNNLIDEAHEVLGNSLKSLP-TRNHIEVVRKFAQLEFSKGDPE 1636
F + ++ +W E L+ N A E+L +LKS P + H++++ KFAQLEF GD E
Sbjct: 1588 FRANQLEVWTLLAEHLMTQNDQKAARELLPRALKSAPKAQQHVQLISKFAQLEFKHGDAE 1647
Query: 1637 QGRSLFEGLLADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITKKITRKQAKFFFNKW 1696
+GR+L EGL+ PK+ DLW VY + +KH A + ER + + + + KW
Sbjct: 1648 RGRTLLEGLVTAHPKKTDLWLVYAEAVLKHLGIEHARKVLERACNLGFSIHKMRPLYKKW 1707
Query: 1697 LQFEEQKDD 1705
L+ E + D
Sbjct: 1708 LEMESKHGD 1716
Score = 85.9 bits (211), Expect = 5e-16
Identities = 176/832 (21%), Positives = 337/832 (40%), Gaps = 95/832 (11%)
Query: 189 KELPDLNKYFKIGQWLRCMVQNNSALESNKNKKLDLSIEPSVVNV-FEDDDLAKNCPLQC 247
+E ++ F++GQ + V + + N K+ + P+ +N + LA L
Sbjct: 114 EEKIEIKNAFQLGQMVPFRVISKK--QGNDKGKVKGTCNPARLNKHLSPNMLAAGLVLHT 171
Query: 248 SLKSIEDHGAILDIGIENLTGFISKKDIPEFSSLLPGMVFLATVTKRSGRTVNVNLDLAS 307
++ SIE+ GAILD+G++ +TGFI K P + L GM + V + R V V +
Sbjct: 172 AVVSIEEKGAILDVGLDQITGFIEKSQFPA-AGLKEGMPLIVRVLSSTSRVVKVTSFVEQ 230
Query: 308 KN---TKVEKISSIDAIVPGQSIDFLP--QTITNHGVIGKAFGLITAFLPLPHSNFFTVE 362
N T EK+ ++ ++PG ++ P +T ++ GL LP N
Sbjct: 231 DNLNMTSCEKL-QLNHLMPGTILECEPTGDAVTAGVIVNIGNGLKGI---LPRRN-LPPR 285
Query: 363 DLKHHYSIGDLVNARILATTIVKSGDKVAVVSTQPHIISLHPKLQETEALESFPVG---- 418
++ +G + A ++ + K+ V++ P I++ ++++ + E +G
Sbjct: 286 LRENPEKLGKAIRAIVM---FCQQNSKILVLNAHPDIVAA-SRIEKRTSFEGISIGDKVK 341
Query: 419 -YIFDSCTVKGRDSQFFYVSINNEQVGQIHLSKAGETE---------PTGTVK-ARILGY 467
+ D K F +I+ ++ +S G E GT K R+ G+
Sbjct: 342 CTVIDVLPTKSM-VYFALPAIDGKKSLVTAVSSRGLLEKPDQVSTEYEVGTEKLCRVTGF 400
Query: 468 NNVDKLYTLTSDPALLDVKYLRSSDIPAGEVLSACEIVTVSGKGIELKIFNDQFKAFVPP 527
D+ T+++ +L+ K + D G+VL A + V+ G+ + N KAF P
Sbjct: 401 RYADRSITISTRKDILNQKITKYQDAKCGDVLDA-RVHHVAKSGVYFMVCN-FVKAFAPL 458
Query: 528 LHISDTRLVYPERK--FKIGSKVKGRVLNV-DSVGRVTVTLKKSIVNADEESVTLVCKND 584
+SD L + K +K+G++VK RV + D + VT ++SI+ SV V
Sbjct: 459 SMLSDKPLPAQKMKNIYKVGTEVKCRVWQICDERKNLIVTCRESILGLKSPSVNSV---- 514
Query: 585 DIQTVESQELKTIGTV-----EIFKPNGCVISFFNNI--------KAFVPNKEISEAFVK 631
QEL+ TV ++F ++ FNNI +P + FV
Sbjct: 515 -------QELEIGVTVPCVIRKVFPTGVLLLGTFNNICGVLRKESAVHLPGTPKNNDFVV 567
Query: 632 KPQEHLRLGQSVLVKILNHDFERNRIIASCKISAESSSKQKSAIESLVVGKSIIDAIVIE 691
E + + V V D + +A+ + S + ++ + + + I +
Sbjct: 568 ANVEKIEDNRVVFVL---RDVNPSAAVANGQNSEKKLVQRPNPADGGISIGKIYKGSLCA 624
Query: 692 KTKDSVIVESKDSGLRGVIYT--GHLSDDRIEQNRASQKKLKINSEVRGLVLDKDIRTHV 749
K + V G + V + HL D ++ K+L I ++ + +
Sbjct: 625 KAGEKANVTFTGEGKKEVYASVDDHLLSDLLDAPIGLTKRLLIENKEDISTIVPMGKMAA 684
Query: 750 FNMSC-KKSLIKDAEDGTLPLSFSDIKNKDKTEPMHGYVKSVSDRGVFVAFNG--KFVGL 806
N +C K+S+ + LP ++K + G V +++ GVFV G VG
Sbjct: 685 INRACVKRSVASFVKGMKLPKKIDELKVGKVIVGIVGQV--ITNVGVFVELVGGSGLVGK 742
Query: 807 VLPSYAAETRDIDIHKKYYINQSVTVYLLRTDEEHERFLL----TILKQKTDVKKINSSV 862
VL A+ + + + Q + + D + FL+ + + +KK +
Sbjct: 743 VLERKNAK----NTSELLEVGQVIVGTIESIDTTKKSFLIDPCTDLETGELMLKKYALPL 798
Query: 863 INPVDKSIKDLSDFTIGKVTKATIT-SVKKNQLNVTLADNVHGRISISEVFDSFEDIKEQ 921
+ + + +K L++ + + + + V K ++TL + H I+ + D ++
Sbjct: 799 LESIVEEVKWLAEQSNYPIPGSKVNGKVTKELDDLTLVEFEHNGKKIAGILPKMVD--DK 856
Query: 922 KAPLSVYKKNDSLSVRVIGFHDIKSRKFLPISHTTSKSHLVELSAKPSSLTS 973
K KK + S V+ I+H+T++ L S + S + +
Sbjct: 857 KTTEKTKKKKATKSFIVV-----------DINHSTNEVVLATPSTEQSRIVA 897
>At5g45990 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 673
Score = 58.5 bits (140), Expect = 9e-08
Identities = 46/223 (20%), Positives = 101/223 (44%), Gaps = 22/223 (9%)
Query: 1478 VWMNYMAFHLQLSEVEKAREIVERALKTINFREESEK----LNIWIASLNLENTFGTEET 1533
++ ++AF Q + E + + K + +E K + W + LE + G ++
Sbjct: 288 LYKKFVAFEKQYGDKEGIEDAIV-GKKRFEYEDEVSKNPLNYDSWFDYVRLEESVGNKDR 346
Query: 1534 VEDVFTKA------CQYMDSFTMHMKLLSIYQMSEKIE-----KAKELFKITAKKFGSEK 1582
+ +++ +A Q + ++ L Y + E+IE + +++++ K K
Sbjct: 347 IREIYERAIANVPPAQEKRFWQRYIYLWINYALYEEIETKDVERTRDVYRECLKLIPHTK 406
Query: 1583 VS---IWVAWGEFLIDNNLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDPEQGR 1639
S IW+ E+ I + A ++LGN++ P +++ +K+ ++E + ++ R
Sbjct: 407 FSFAKIWLLAAEYEIRQLNLTGARQILGNAIGKAPK---VKIFKKYIEMELKLVNIDRCR 463
Query: 1640 SLFEGLLADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITK 1682
L+E L +P+ W Y + EI E +A +FE I++
Sbjct: 464 KLYERFLEWSPENCYAWRNYAEFEISLAETERARAIFELAISQ 506
>SPBC31F10.11c [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 674
Score = 55.8 bits (133), Expect = 6e-07
Identities = 48/258 (18%), Positives = 102/258 (38%), Gaps = 19/258 (7%)
Query: 1455 NTRIPESVGDFERLIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEK 1514
N I + F+R + P +W Y+ L + R++ ER LK E E
Sbjct: 117 NRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKW----EPDE- 171
Query: 1515 LNIWIASLNLENTFGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKIT 1574
N W++ + +E + E ++ + T ++ + ++++
Sbjct: 172 -NCWMSYIRMERRYHENERARGIYERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAA 230
Query: 1575 AKKFGSEKVS--IWVAWGEFLIDNNLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSK 1632
G E ++ ++A+ +F I + A + ++ +P +E+ +++ E
Sbjct: 231 IDALGQEFLNERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQF 290
Query: 1633 GDP--------EQGRSLFEGLLADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITK-- 1682
GD ++ R +E LL D+P D W + E G+ + + +E+ I K
Sbjct: 291 GDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVP 350
Query: 1683 KITRKQA-KFFFNKWLQF 1699
++ K A + + WL +
Sbjct: 351 EVVEKNAWRRYVYIWLNY 368
>At3g13210 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 657
Score = 54.3 bits (129), Expect = 2e-06
Identities = 59/284 (20%), Positives = 113/284 (39%), Gaps = 56/284 (19%)
Query: 1478 VWMNYMAFHLQLSEVEKAREIV---ERALKTINFREESEKLNIWIASLNLENTFGTEETV 1534
++ ++AF Q + E + + R R+ + W + LE T G ++ +
Sbjct: 256 LYSKFVAFEKQNGDKEGIEDAIIGKRRCQYEDEVRKNPLNYDSWFDFVRLEETVGNKDRI 315
Query: 1535 EDVFTKA--------CQYMDSFTMHMKLLSIY-----QMSEKIEKAKELFKITAKKFGSE 1581
+++ +A Q + ++ L Y ++E +E +++++ K
Sbjct: 316 REIYERAVANVPPPEAQEKRYWQRYIYLWINYAFFAEMVTEDVESTRDVYRACLKLIPHS 375
Query: 1582 KVS---IWVAWGEFLIDNNLIDEAHEVLGNSLKSLPT----RNHIEVV------------ 1622
K S IW+ + I + A ++LGN++ P + +IE+
Sbjct: 376 KFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKL 435
Query: 1623 ---------------RKFAQLEFSKGDPEQGRSLFEGLLADAPKRVD----LWNVYIDQE 1663
RK+A+ E S + E+ R++FE LA + +D LW YID E
Sbjct: 436 YERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFE--LAISQPALDMPELLWKTYIDFE 493
Query: 1664 IKHGEKSKAEDLFERVITKKITRKQAKFFFNKWLQFEEQKDDQK 1707
I GE + L+ER++ + K F E K+D++
Sbjct: 494 ISEGELERTRALYERLLDRTKHCKVWVDFAKFEASAAEHKEDEE 537
>Hs6912732 [A] KOG0495 HAT repeat protein
Length = 941
Score = 53.1 bits (126), Expect = 4e-06
Identities = 45/215 (20%), Positives = 90/215 (40%), Gaps = 8/215 (3%)
Query: 1466 ERLIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNIWIASLNLE 1525
+R + P + V+W+ +V AR I+ A + EE IW+A++ LE
Sbjct: 598 QRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEE-----IWLAAVKLE 652
Query: 1526 NTFGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKKFGSEKVSI 1585
+ E + KA + + MK + + + + I A++L + + + + +
Sbjct: 653 SENDEYERARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHY-EDFPKL 711
Query: 1586 WVAWGEFLIDNNLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDPEQGRSLFEGL 1645
W+ G+ ++++A E LK P + ++ ++LE G + R++ E
Sbjct: 712 WMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLL--LSRLEEKIGQLTRARAILEKS 769
Query: 1646 LADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVI 1680
PK LW + E + G K+ A L + +
Sbjct: 770 RLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKAL 804
>7293846 [A] KOG0495 HAT repeat protein
Length = 913
Score = 52.0 bits (123), Expect = 8e-06
Identities = 51/215 (23%), Positives = 86/215 (39%), Gaps = 8/215 (3%)
Query: 1466 ERLIMGNPNSSVVWMNYMAFHLQLSEVEKAREIVERALKTINFREESEKLNIWIASLNLE 1525
+R + P S ++W+ +V AR I+ A F+ +IW+A++ LE
Sbjct: 570 QRAVAHCPKSEILWLMGAKSKWMAGDVPAARGILSLA-----FQANPNSEDIWLAAVKLE 624
Query: 1526 NTFGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKKFGSEKVSI 1585
+ E + KA + + MK + EK ++A L + + F + +
Sbjct: 625 SENSEYERARRLLAKARGSAPTPRVMMKSARLEWALEKFDEALRLLEEAVEVF-PDFPKL 683
Query: 1586 WVAWGEFLIDNNLIDEAHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKGDPEQGRSLFEGL 1645
W+ G+ D+A LK PT + ++ A LE KG + RS+ E
Sbjct: 684 WMMKGQIEEQQRRTDDAAATYTLGLKKCPTSIPLWILS--ANLEERKGVLTKARSILERG 741
Query: 1646 LADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVI 1680
PK LW I E++ G K A + R +
Sbjct: 742 RLRNPKVAVLWLEAIRVELRAGLKEIASTMMARAL 776
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,305,856
Number of Sequences: 60738
Number of extensions: 3704376
Number of successful extensions: 8778
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8540
Number of HSP's gapped (non-prelim): 91
length of query: 1729
length of database: 30,389,216
effective HSP length: 120
effective length of query: 1609
effective length of database: 23,100,656
effective search space: 37168955504
effective search space used: 37168955504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)