ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2095 check: MH BK KOG0386 Chromatin structure and dynamics Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily)
r_klactII2095 check: MH BK KOG0386 Transcription Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2095 742205 746806 1534
(1534 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 1333 0.0
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 942 0.0
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 863 0.0
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 687 0.0
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 685 0.0
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 675 0.0
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 675 0.0
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 672 0.0
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 670 0.0
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 608 e-173
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 593 e-169
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 559 e-158
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 475 e-133
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 469 e-131
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 453 e-127
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 446 e-124
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 446 e-124
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 444 e-124
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 444 e-124
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 427 e-119
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 427 e-119
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 409 e-113
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 404 e-112
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 401 e-111
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 399 e-110
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 393 e-108
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 392 e-108
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 386 e-106
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 385 e-106
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 384 e-106
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 383 e-105
Hs4557451 [R] KOG0383 Predicted helicase 379 e-104
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 377 e-104
Hs20533808 [R] KOG0383 Predicted helicase 375 e-103
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 373 e-102
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 372 e-102
At2g25170 [R] KOG0383 Predicted helicase 372 e-102
CE17716 [R] KOG0383 Predicted helicase 370 e-102
CE03657 [R] KOG0383 Predicted helicase 370 e-101
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 364 e-100
Hs4557453 [R] KOG0383 Predicted helicase 363 e-100
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 361 4e-99
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 360 7e-99
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 360 1e-98
7293795 [R] KOG0383 Predicted helicase 355 2e-97
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 336 1e-91
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 336 1e-91
SPBP35G2.10 [R] KOG0383 Predicted helicase 336 2e-91
At5g44800 [R] KOG0383 Predicted helicase 334 6e-91
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 314 6e-85
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 313 1e-84
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 309 3e-83
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 306 2e-82
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 305 3e-82
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 298 4e-80
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 290 2e-77
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 287 1e-76
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 286 1e-76
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 285 4e-76
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 281 7e-75
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 280 1e-74
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 277 1e-73
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 273 1e-72
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 273 1e-72
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 266 2e-70
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 263 1e-69
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 263 2e-69
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 261 8e-69
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 259 3e-68
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 257 1e-67
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 251 5e-66
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 249 2e-65
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 249 2e-65
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 246 2e-64
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 234 6e-61
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 231 9e-60
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 228 6e-59
YBR073w [L] KOG0390 DNA repair protein SNF2 family 224 6e-58
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 221 9e-57
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 218 6e-56
7295868 [L] KOG0390 DNA repair protein SNF2 family 216 2e-55
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 212 3e-54
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 211 6e-54
YGL163c [L] KOG0390 DNA repair protein SNF2 family 209 4e-53
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 207 1e-52
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 202 3e-51
CE25143 [L] KOG0390 DNA repair protein SNF2 family 200 2e-50
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 197 1e-49
At4g31900 [R] KOG0383 Predicted helicase 196 2e-49
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 186 2e-46
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 184 7e-46
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 178 5e-44
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 176 3e-43
CE23323 [L] KOG0390 DNA repair protein SNF2 family 175 6e-43
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 174 1e-42
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 171 6e-42
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 171 1e-41
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 168 5e-41
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 164 1e-39
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 147 2e-34
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 141 9e-33
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 130 2e-29
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 130 2e-29
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 122 4e-27
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 121 1e-26
7293730 [R] KOG0383 Predicted helicase 120 1e-26
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 117 2e-25
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 116 2e-25
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 115 4e-25
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 112 6e-24
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 112 6e-24
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 107 1e-22
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 107 2e-22
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 107 2e-22
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 107 2e-22
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 104 1e-21
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 102 6e-21
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 102 6e-21
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 100 1e-20
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 100 2e-20
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 100 2e-20
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 97 3e-19
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 96 3e-19
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 96 4e-19
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 94 2e-18
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 91 1e-17
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 90 2e-17
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 90 3e-17
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 89 4e-17
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 89 5e-17
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 89 5e-17
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 87 2e-16
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 87 3e-16
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 87 3e-16
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 83 3e-15
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 83 4e-15
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 82 5e-15
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 82 7e-15
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 81 1e-14
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 81 1e-14
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 80 3e-14
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 79 6e-14
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 79 6e-14
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 78 1e-13
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 77 2e-13
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 75 6e-13
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 74 1e-12
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 73 4e-12
7301208 [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 70 3e-11
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 67 3e-10
SPBC1734.15 [BK] KOG1827 Chromatin remodeling complex RSC subuni... 65 1e-09
SPBC4B4.03 [BK] KOG1827 Chromatin remodeling complex RSC subunit... 64 2e-09
CE23294 [KL] KOG4439 RNA polymerase II transcription termination... 62 5e-09
YLR357w [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 60 3e-08
CE05310 [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 59 5e-08
YGR056w [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 57 2e-07
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 57 2e-07
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 56 5e-07
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 55 9e-07
YKR008w [BK] KOG1827 Chromatin remodeling complex RSC subunit RS... 53 3e-06
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 53 4e-06
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 52 6e-06
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 52 7e-06
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 1333 bits (3449), Expect = 0.0
Identities = 714/1262 (56%), Positives = 862/1262 (67%), Gaps = 82/1262 (6%)
Query: 342 LSTYKKQHEDIEKYIDVASPHIMVDCFSYPEQGGIPGSTPLVPPISYTDLL---NQQNLS 398
L+ + Q+++ K +D+ P +MVD F+ P I S I Y LL + +
Sbjct: 427 LNVLQDQYKEGIKVVDIDDPDMMVDSFTMPN---ISHSN-----IDYQTLLANSDHAKFT 478
Query: 399 ITPSLLPVGLDPRSAMETYQTLIALDLDTSLDFCLQQLLESDSQVKDKGELIMDYNAMQL 458
I P +LPVG+D +A + YQTLIAL+LDT+++ CL +LL + + + DY A+QL
Sbjct: 479 IEPGVLPVGIDTHTATDIYQTLIALNLDTTVNDCLDKLLNDECTESTRENALYDYYALQL 538
Query: 459 LPLQKAIRGYVLSFEWYQSTLLTNIHPNFLSKNRGLNIQDALLTRELFKSRXXXXXXXXX 518
LPLQKA+RG+VL FEW+Q++LLTN HPNFLSK R +N+QDALLT +L+K+
Sbjct: 539 LPLQKAVRGHVLQFEWHQNSLLTNTHPNFLSKIRNINVQDALLTNQLYKNHELLKLERKK 598
Query: 519 XXXXXXLNSILDRCKSIHDLRIDKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQA 578
L S+ + ++ R DKK +R+K GHRLI HTNLE++E KR E+ AK+RLQA
Sbjct: 599 TEAVARLKSMNKSAINQYNRRQDKKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQA 658
Query: 579 LKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELS 638
LKANDEEAYIKLLDQTKDTRITHLL+QTN FLDSLT+AVKDQQ +TK+ I+SH+
Sbjct: 659 LKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAVKDQQKYTKEMIDSHIKEASEE 718
Query: 639 EDN---VGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWM 695
D+ V + DDD + +DYY VAH IKE++K+QPSILVGGTLK+YQ+KGLQWM
Sbjct: 719 VDDLSMVPKMKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWM 778
Query: 696 VSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKW 755
VSLFNNHLNGILADEMGLGKTIQTISLLTYLYE K + GP+LVIVPLSTL+NW++EF KW
Sbjct: 779 VSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKW 838
Query: 756 APKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHR 815
AP LR I+FKG P ERK KQA I+ EFDVVLTTFEYIIKER LLSK+KWVH IIDEGHR
Sbjct: 839 APTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHR 898
Query: 816 MKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNT 875
MKNAQSKLSLTLNT+YH+DYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNT
Sbjct: 899 MKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNT 958
Query: 876 PFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSAL 935
PFANTGGQDKI LSEEETLLVIRRLHKVLRPFLLRRLKKDVEK+LPDKVEKV+KCKMSAL
Sbjct: 959 PFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSAL 1018
Query: 936 QHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARE 995
Q +YQQMLK+RRLFI D +N+K RGFNNQIMQL+KICNHPFVFEEVEDQINP RE
Sbjct: 1019 QQIMYQQMLKYRRLFI-GDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRE 1077
Query: 996 TNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHT 1055
TND IWR AGKFELL+RILPK KATGHRVLIFFQMTQ+MDIMEDFLRY+++KYLRLDGHT
Sbjct: 1078 TNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHT 1137
Query: 1056 KSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 1115
KSD+R+ LL FNAP+S+Y CF+LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA
Sbjct: 1138 KSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 1197
Query: 1116 HRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXX 1175
HRIGQKNEVRILRLIT NSVEE IL++A+ KLDIDGKVIQAGKFDNKST
Sbjct: 1198 HRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSL 1257
Query: 1176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARNENEIKVFQELDAQRIRTQMENGITNRL 1235
LARN+ E+ V +D R + + E G+ +RL
Sbjct: 1258 LDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRL 1317
Query: 1236 MENSELPECYNVDIEAKLAEEEKQNVFV-GGRGNRERRTAHYS----------------D 1278
+E SELP+ Y+ DI A+L EE ++ V GRG RER+TA Y+ D
Sbjct: 1318 LEKSELPDIYSRDIGAELKREESESAAVYNGRGARERKTATYNDNMSEEQWLRQFEVSDD 1377
Query: 1279 ELSEEQWLRQFEVSENEDEEGDA--------------GPXXXXXXXXXXXXXXXXLETNK 1324
E +++Q +Q E++ E D GP + +
Sbjct: 1378 EKNDKQARKQRTKKEDKSEAIDGNGEIKGENIDADNDGPRINNISAEDRADTDLAMNDDD 1437
Query: 1325 ELDGPAT--------------GTENT--PVLDPQESNGDSAPSGVXXXXXXXXXXXXXXX 1368
L G+EN+ P L+ GD++PS
Sbjct: 1438 FLSKKRKAGRPRGRPKKVKLEGSENSEPPALESSPVTGDNSPSEDFMDIPKPRTAGKTSV 1497
Query: 1369 XXXXXXXXVR--------------------KNGRNYLRSADNATKTLKERQEISQKAREL 1408
R +NG +Y+R+ AT + R++++++A +L
Sbjct: 1498 KSARTSTRGRGRGRGRGRGRGRGRGRPPKARNGLDYVRTPAAATSPIDIREKVAKQALDL 1557
Query: 1409 YDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVV 1468
Y +A+ Y N R+LSDIFL KPSK LYPDYY++IKYP AF+N+ HI+ Y+SLK+ +
Sbjct: 1558 YHFALNYENEAGRKLSDIFLSKPSKALYPDYYMIIKYPVAFDNINTHIETLAYNSLKETL 1617
Query: 1469 EDFHLIFANARIYNTEDSIIFRDSLELEDAVIAKWKEMTNXXXXXXXXXXXXXXATPPLI 1528
+DFHLIF+NARIYNTE S+++ DSLELE V K+ E+ T PL+
Sbjct: 1618 QDFHLIFSNARIYNTEGSVVYEDSLELEKVVTKKYCEIMGDNSQLDFTEFDEQYGTRPLV 1677
Query: 1529 PP 1530
P
Sbjct: 1678 LP 1679
Score = 65.5 bits (158), Expect = 6e-10
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 8 PRREYTREEINRCYLRWQQLRNEHGANVESMKEYQYYTAVLRMAA 52
P+R+++ EE+NRCYLRWQ LRNEHG N S+ E+ Y T VL+ AA
Sbjct: 4 PQRQFSNEEVNRCYLRWQHLRNEHGMNAPSVPEFIYLTKVLQFAA 48
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 942 bits (2434), Expect = 0.0
Identities = 545/1166 (46%), Positives = 704/1166 (59%), Gaps = 114/1166 (9%)
Query: 428 SLDFCLQQLLESDSQVKD---KGELIMDYNAMQLLPLQKAIRGYVLS---FEWYQSTLLT 481
SLD CL+ + + D + K + +++ +++LL QK+IR +++ + + +
Sbjct: 217 SLDDCLEFITKDDLSSRMDTFKIKALVELKSLKLLTKQKSIRQKLINNVASQAHHNIPYL 276
Query: 482 NIHPNFLSKNRGLNI-------QDALLTRELFKSRXXXXXXXXXXXXXXXLNSILDRCKS 534
P + R + I Q L EL + + +NSI+D K
Sbjct: 277 RDSPFTAAAQRSVQIRSKVIVPQTVRLAEELERQQLLEKRKKERNLHLQKINSIIDFIKE 336
Query: 535 IHDLRIDKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQT 594
+ ++ + + G +LH +EK+E KRIER AKQRL ALK+NDEEAY+KLLDQT
Sbjct: 337 RQSEQWSRQERCFQFGRLGASLHNQMEKDEQKRIERTAKQRLAALKSNDEEAYLKLLDQT 396
Query: 595 KDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDL 654
KDTRIT LL+QTN+FLDSL++AV+ QQ+ + KI + Q ++++
Sbjct: 397 KDTRITQLLRQTNSFLDSLSEAVRAQQN--EAKILHGEEVQPITDE-------------- 440
Query: 655 ERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLG 714
ERE+ DYYEVAH IKE++ +QPSILVGGTLKEYQL+GL+WMVSL+NNHLNGILADEMGLG
Sbjct: 441 EREKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLG 500
Query: 715 KTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPK 774
KTIQ+ISL+TYLYE K GPFLVIVPLST+TNW EF+KWAP L I +KG P +R
Sbjct: 501 KTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSL 560
Query: 775 QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSD 834
Q I+ FDV+LTT+EYIIK++ LLSK W H IIDEGHRMKNAQSKLS T++ YY +
Sbjct: 561 QHQIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTR 620
Query: 835 YRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETL 894
RLILTGTPLQNNLPELWALLNFVLPKIFNS K+F++WFNTPFANTG Q+K+ L+EEETL
Sbjct: 621 NRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETL 680
Query: 895 LVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDD 954
L+IRRLHKVLRPFLLRRLKK+VEKDLPDKVEKV+KCK+S LQ +LYQQMLKH LF+
Sbjct: 681 LIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAG 740
Query: 955 SSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERIL 1014
+ +G NN+IMQLRKICNHPFVF+EVE +NP+R +D ++R AGKFELL+R+L
Sbjct: 741 TEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVL 800
Query: 1015 PKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDY 1074
PKFKA+GHRVL+FFQMTQVMDIMEDFLR D+KY+RLDG TK+++RT +LN FNAP+SDY
Sbjct: 801 PKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDY 860
Query: 1075 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNS 1134
FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT +S
Sbjct: 861 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDS 920
Query: 1135 VEEAILDKAHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1194
VEE IL++A KLDIDGKVIQAGKFDNKST
Sbjct: 921 VEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDE 980
Query: 1195 XXXXXXXXXXLARNENEIKVFQELDAQRIRTQMENGITN-------RLMENSELPECYNV 1247
LAR+ +E +F ++D +R+ + + RL++ ELP+ +
Sbjct: 981 LNDT------LARSADEKILFDKIDKERMNQERADAKAQGLRVPPPRLIQLDELPKVFRE 1034
Query: 1248 DIEAKLAEEEKQNVFVGGRGNRERRTAHYSDELSEEQW---------------------- 1285
DIE +E+ + + GR R+++ +Y D L+EEQ+
Sbjct: 1035 DIEEHFKKEDSEPL---GR-IRQKKRVYYDDGLTEEQFLEAVEDDNMSLEDAIKKRREAR 1090
Query: 1286 ----LRQFEVSENEDEEGDAGPXXXXXXXXXXXXXXXXLETNKELDGPATGT-------- 1333
LRQ ENE E + P ++ D T +
Sbjct: 1091 ERRRLRQNGTKENEIETLENTPEASETSLIENNSFTAAVDEETNADKETTASRSKRRSSR 1150
Query: 1334 -------------ENTPVLDP-QESNGDSAPSGVXXXXXXXXXXXXXXXXXXXXXXXVRK 1379
ENT QE+ G V ++
Sbjct: 1151 KKRTISIVTAEDKENTQEESTSQENGGAKVEEEVKSSSVEIINGSESKKKKPKLTVKIKL 1210
Query: 1380 NGRNYLRSADN------------ATKTLKERQEISQKARELY--------DYAVYYRNAD 1419
N L + D A KT ++ + K+ ++ + D
Sbjct: 1211 NKTTVLENNDGKRAEEKPESKSPAKKTAAKKTKTKSKSLGIFPTVEKLVEEMREQLDEVD 1270
Query: 1420 DRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANAR 1479
+ IF PSKR YPDY+ +I+ P A + ++K+ Y +L++V + +F NAR
Sbjct: 1271 SHPRTSIFEKLPSKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFENAR 1330
Query: 1480 IYNTEDSIIFRDSLELEDAVIAKWKE 1505
YN E S ++ D+ +L + +KE
Sbjct: 1331 FYNEEGSWVYVDADKLNEFTDEWFKE 1356
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 863 bits (2230), Expect = 0.0
Identities = 459/849 (54%), Positives = 582/849 (68%), Gaps = 28/849 (3%)
Query: 446 KGELIMDYNAMQLLPLQKAIRGYVLSFEWYQSTLLTNIHPNFLSKNRGLNIQDALLTREL 505
K +++ ++L+ Q+++R V+ + + T++ + + L Q LT L
Sbjct: 194 KRNALVELKKLRLIKQQESLRHQVMHCQPHLRTIVNAVE-RMSCRRPKLVPQATRLTEVL 252
Query: 506 FKSRXXXXXXXXXXXXXXXLNSILDRCKSIHDLRIDKKAQRVKLGHRLINLHTNLEKEEL 565
+ + L ++ + I+ + +A+ K ++ H+++EKEE
Sbjct: 253 ERQQRSDRERRLKQKQCDYLQTVCAHGREINVRTKNAQARAQKANRAVLAYHSHIEKEEQ 312
Query: 566 KRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQS-FT 624
+R ERNAKQRLQALK NDEEAY+KL+DQ KDTRITHLL+QT+ +LDSL AVK QQS F
Sbjct: 313 RRAERNAKQRLQALKENDEEAYLKLIDQAKDTRITHLLRQTDHYLDSLAAAVKVQQSQFG 372
Query: 625 KDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTL 684
+ + +D + ED+ +IDYY VAH+I+E V +QPSILVGG L
Sbjct: 373 ESAYDEDMDRRMNPEDD---------------RKIDYYNVAHNIREVVTEQPSILVGGKL 417
Query: 685 KEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLST 744
KEYQL+GLQWM+SL+NNHLNGILADEMGLGKTIQTISL+T+L E K +GPFLVIVPLST
Sbjct: 418 KEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLST 477
Query: 745 LTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIK 804
LTNW EF++WAP + KI +KGPP RK +++ F V+LTT+EYIIK+RPLLS+IK
Sbjct: 478 LTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIK 537
Query: 805 WVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFN 864
W++ IIDEGHRMKN QSKL+ TL TYY S YRLILTGTPLQNNLPELWALLNFVLP+IFN
Sbjct: 538 WIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFN 597
Query: 865 SVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKV 924
S+KSFDEWFNTPFANTGGQDK+ L+EEE+LLVIRRLHKVLRPFLLRRLKKDVE +LPDKV
Sbjct: 598 SIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPDKV 657
Query: 925 EKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFE 984
EKV++C+MS LQ KLY QM KH L++ D + + +G N +MQL+KICNHPFVFE
Sbjct: 658 EKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGK--TGIKGLQNTVMQLKKICNHPFVFE 715
Query: 985 EVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL 1044
+VE I+P D +WR +GKFELL+RILPK +GHR+L+FFQMTQ+M+IMED+L Y
Sbjct: 716 DVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIMEDYLHYR 775
Query: 1045 DMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWN 1104
+YLRLDG TK+DDR+ LL FN P ++ FLLSTRAGGLGLNLQTADTVIIFD+DWN
Sbjct: 776 QWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWN 835
Query: 1105 PHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKST 1164
PHQDLQAQDRAHRIGQ EVRI RLIT+ SVEE IL +A KLDIDGKVIQAGKFDNKST
Sbjct: 836 PHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAGKFDNKST 895
Query: 1165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARNENEIKVFQEL--DAQR 1222
LAR ++E+++F+++ D +R
Sbjct: 896 -----PEEREAFLRSLLENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDLER 950
Query: 1223 IRTQMENGITNRLMENSELPECYNVDIEAKLAEEEKQNVFVGGRGNRERRTAHYSDELSE 1282
+N RL++ SELPE Y + K + ++ GRG R R Y + + +
Sbjct: 951 ESPYGKNKEKERLIQVSELPEFYQREEPEKTTDLLQEEPL--GRGARRRTPVVYDEAVRD 1008
Query: 1283 EQWLRQFEV 1291
QW+ + ++
Sbjct: 1009 AQWMAEMDM 1017
Score = 80.1 bits (196), Expect = 3e-14
Identities = 40/115 (34%), Positives = 67/115 (57%)
Query: 1392 TKTLKERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFEN 1451
T T + R + + E+Y + + R L+ +FL PSK+LYPDYY++IK P A +
Sbjct: 1057 TLTSEHRSLLRRVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLYPDYYMIIKSPIALDA 1116
Query: 1452 VMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELEDAVIAKWKEM 1506
+ KHI+ Y +L+ + D +F NAR YN E S ++ D+ +++ A+ K +E+
Sbjct: 1117 IRKHINGTFYKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKMQTAMETKIEEL 1171
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 687 bits (1773), Expect = 0.0
Identities = 384/771 (49%), Positives = 502/771 (64%), Gaps = 49/771 (6%)
Query: 546 RVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQ 605
R + + N + + +EE+K N K R+Q L DEE Y +LD+ KD R+ +LL+Q
Sbjct: 217 RKSMQQYITNENKRIAREEMK----NEKNRIQKLIQEDEEGYRAMLDEKKDQRLVYLLEQ 272
Query: 606 TNTFLDSLTKAVKDQQSFT------KDKIESHLD--TQELSEDNVGDKNGADSDDDLERE 657
T+ ++ SL +K QQ+ T K I D +E ++ DK D D+ +
Sbjct: 273 TDDYIKSLCDLLKQQQNATAGSLATKSYIRKEYDGVAEEDKVKSILDKARNDDDEYENKT 332
Query: 658 RI---DYYEVAHSIKEEVKQQPSILVGGT----LKEYQLKGLQWMVSLFNNHLNGILADE 710
++ DYY AH ++EE+K+Q ++ GG LK YQ+KGL+WMVSLFNN+LNGILADE
Sbjct: 333 KMNIEDYYTTAHGVREEIKEQHFMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADE 392
Query: 711 MGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPME 770
MGLGKTIQTI+ +TYL E K GPFLVIVPLST+ NW EFDKWA + IA+KGP
Sbjct: 393 MGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPKET 452
Query: 771 RKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTY 830
RK + +IK+ +F+V+LTTFEY+I+E+ LL K++W + IIDEGHR+KN KL+ LNT
Sbjct: 453 RKVFEPIIKSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTR 512
Query: 831 YHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSE 890
+ RL++TGTPLQN LPELWALLNF+LP IF+S +F++WFN PFA TG +K+ L++
Sbjct: 513 FQCQRRLLITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTG--EKVELTQ 570
Query: 891 EETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLF 950
EET+L+IRRLHKVLRPFLLRRLKK+VE +LPDK+E V++C MSALQ LY+ M K
Sbjct: 571 EETMLIIRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQKG---L 627
Query: 951 IFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQIN---PARETNDT-IWRSAGK 1006
+ D +N + S+ N ++ LRK+CNHPF+FE VE+ AR + ++R +GK
Sbjct: 628 LLDGKTN---TGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYRVSGK 684
Query: 1007 FELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNT 1066
ELL RILPK +ATGHRVL+FFQMT +M I+EDFL ++YLRLDG TK D+R ALL+
Sbjct: 685 LELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDK 744
Query: 1067 FNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 1126
FNAPNS+YF F+LSTRAGGLGLNLQTADTVIIFD+DWNPHQD+QAQDRAHRIGQK EVR+
Sbjct: 745 FNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRV 804
Query: 1127 LRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXX 1186
RLIT NSVEE IL A KL++D KVIQAGKFDN+ST
Sbjct: 805 FRLITANSVEEKILAAARYKLNVDEKVIQAGKFDNRST-------GAERREILENIIKTE 857
Query: 1187 XXXXXXXXXXXXXXXXXXLARNENEIKVFQELDAQRIRTQMENGITNRLMENSELPE--- 1243
L+R+E E ++FQ++D +R + RL+ E+P
Sbjct: 858 NESEEDEEVPNDEDINDILSRSEEEFELFQKMDQERFENEQAQKAKPRLVGEDEIPRDIL 917
Query: 1244 --CYNVDIEAKLAEEEK---QNVFVGGRGNRERRTAHYS-DELSEEQWLRQ 1288
D K EE + V G R R RR YS D +S++++L +
Sbjct: 918 RAADETDYIEKAKEEGRVPYLEVMPGSR--RTRREVDYSADTMSDDKFLEK 966
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 685 bits (1768), Expect = 0.0
Identities = 390/908 (42%), Positives = 541/908 (58%), Gaps = 94/908 (10%)
Query: 633 DTQELSEDNVGDKNGADSDDD------LERERIDYYEVAHSIKEEVKQQPSILVGGTLKE 686
D E+ ++ + D DD+ L R YY VAH++ E V +Q +++V G LK+
Sbjct: 697 DVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQ 756
Query: 687 YQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLT 746
YQ+KGL+W+VSL+NN+LNGILADEMGLGKTIQTI+L+TYL E K ++GPFL+IVPLSTL+
Sbjct: 757 YQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLS 816
Query: 747 NWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWV 806
NW EFDKWAP + K+++KG P R+ +++ +F+V+LTT+EYIIK++ +L+KI+W
Sbjct: 817 NWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWK 876
Query: 807 HTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSV 866
+ I+DEGHRMKN KL+ LNT+Y + RL+LTGTPLQN LPELWALLNF+LP IF S
Sbjct: 877 YMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSC 936
Query: 867 KSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEK 926
+F++WFN PFA TG +K+ L+EEET+L+IRRLHKVLRPFLLRRLKK+VE LP+KVE
Sbjct: 937 STFEQWFNAPFAMTG--EKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEY 994
Query: 927 VLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQK--FSSSRGFNNQIMQLRKICNHPFVFE 984
V+KC MSALQ LY+ M + + + + D S K ++ N IMQLRKICNHP++F+
Sbjct: 995 VIKCDMSALQRVLYRHM-QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1053
Query: 985 EVEDQINPARETNDTI------WRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIME 1038
+E+ + I +R++GKFELL+RILPK +AT H+VL+F QMT +M IME
Sbjct: 1054 HIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIME 1113
Query: 1039 DFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVII 1098
D+ Y KYLRLDG TK++DR LL TFN P S+YF FLLSTRAGGLGLNLQ+ADTVII
Sbjct: 1114 DYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVII 1173
Query: 1099 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
FD+DWNPHQDLQAQDRAHRIGQ+NEVR+LRL T NSVEE IL A KL++D KVIQAG
Sbjct: 1174 FDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM 1233
Query: 1159 FDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXLARNE 1209
FD KS+ + E
Sbjct: 1234 FDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEE 1293
Query: 1210 NEIKVFQELDAQRIRTQMENGITNRLMENSELPECYNVDIEAKLAEE------------- 1256
+E+ + ++ R + E + R+ + E N + +L EE
Sbjct: 1294 DEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAE 1353
Query: 1257 ------EKQNVFVGGRGNRERRTAHYSDELSEEQWLRQFEVSENEDEEGDAGPXXXXXXX 1310
E++ + GRG+R R+ YSD L+E+QWL+ E E+ E +
Sbjct: 1354 VERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEV--------- 1404
Query: 1311 XXXXXXXXXLETNKELD-GPATGTENTPVLDPQESNGDSAPSGVXXXXXXXXXXXXXXXX 1369
+ ++ D G +T T +T D + +
Sbjct: 1405 ---RQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ--------------------- 1440
Query: 1370 XXXXXXXVRKNGRNYLRSADNATKTLKERQEISQKARELYDYAVYYRNADD-RRLSDIFL 1428
+K GR A K +++K +++ D + Y+++ R+LS++F+
Sbjct: 1441 --------KKRGR------PPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFI 1486
Query: 1429 VKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSII 1488
PS++ P+YY LI+ P F+ + + I + Y SL + +D L+ NA+ +N E S+I
Sbjct: 1487 QLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLI 1546
Query: 1489 FRDSLELE 1496
+ DS+ L+
Sbjct: 1547 YEDSIVLQ 1554
Score = 93.2 bits (230), Expect = 3e-18
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 24/293 (8%)
Query: 377 PGSTPLVPPISYTD----------LLNQQNLSITPSLLPVGLDPRSAMETYQTLIALDLD 426
P ++P++PP + + L+Q+ ITP P GLDP ++ + L
Sbjct: 320 PAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQERE----YRLQ 375
Query: 427 TSLDFCLQQL------LESDSQVKDKGELIMDYNAMQLLPLQKAIRGYVLSFEWYQSTLL 480
+ +Q+L L D + K EL A++LL Q+ +R V+ + L
Sbjct: 376 ARIAHRIQELENLPGSLAGDLRTKATIEL----KALRLLNFQRQLRQEVVVCMRRDTALE 431
Query: 481 TNIHPNFLSKNRGLNIQDALLTRELFKSRXXXXXXXXXXXXXXXLNSILDRCKSIHDLRI 540
T ++ +++ ++++A +T +L K + LNSIL K +
Sbjct: 432 TALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHR 491
Query: 541 DKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRIT 600
+ KL + H N E+E+ K ER K+R++ L A DEE Y KL+DQ KD R+
Sbjct: 492 SVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLA 551
Query: 601 HLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDD 653
+LL+QT+ ++ +LT+ V+ ++ K + ++ +E+ G D +
Sbjct: 552 YLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGE 604
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 675 bits (1742), Expect = 0.0
Identities = 365/700 (52%), Positives = 473/700 (67%), Gaps = 42/700 (6%)
Query: 624 TKDKIESHLDTQELSEDN---VGDKNGADSDDDLE-----RERIDYYEVAHSIKEEVKQQ 675
T++KI +++E+SE + + + D DD+ R YY VAH+I E V++Q
Sbjct: 652 TEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQ 711
Query: 676 PSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGP 735
++L+ GTLK YQL+GL+WMVSL+NN+LNGILADEMGLGKTIQTI+L+TYL E K ++GP
Sbjct: 712 SALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGP 771
Query: 736 FLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIK 795
+L+IVPLSTL+NW EFDKWAP + KI++KG P R+ +++ +F+V+LTT+EYIIK
Sbjct: 772 YLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIK 831
Query: 796 ERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALL 855
++ +L+KI+W + I+DEGHRMKN KL+ LNT+Y + R++LTGTPLQN LPELWALL
Sbjct: 832 DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALL 891
Query: 856 NFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKD 915
NF+LP IF S +F++WFN PFA TG +++ L+EEET+L+IRRLHKVLRPFLLRRLKK+
Sbjct: 892 NFLLPTIFKSCSTFEQWFNAPFAMTG--ERVDLNEEETILIIRRLHKVLRPFLLRRLKKE 949
Query: 916 VEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQK--FSSSRGFNNQIMQL 973
VE LP+KVE V+KC MSALQ LY+ M + + + + D S K ++ N IMQL
Sbjct: 950 VESQLPEKVEYVIKCDMSALQKILYRHM-QAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 1008
Query: 974 RKICNHPFVFEEVEDQ-----------INPARETNDTIWRSAGKFELLERILPKFKATGH 1022
RKICNHP++F+ +E+ IN A ++R++GKFELL+RILPK +AT H
Sbjct: 1009 RKICNHPYMFQHIEESFAEHLGYSNGVINGAE-----LYRASGKFELLDRILPKLRATNH 1063
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
RVL+F QMT +M IMED+ + + YLRLDG TKS+DR ALL FN P S YF FLLSTR
Sbjct: 1064 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1123
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
AGGLGLNLQ ADTV+IFD+DWNPHQDLQAQDRAHRIGQ+NEVR+LRL T NSVEE IL
Sbjct: 1124 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1183
Query: 1143 AHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1202
A KL++D KVIQAG FD KS+
Sbjct: 1184 AKYKLNVDQKVIQAGMFDQKSS-------SHERRAFLQAILEHEEENEEEDEVPDDETLN 1236
Query: 1203 XXLARNENEIKVFQELDAQRIRTQMENGITN-RLMENSELPECY---NVDIEAKLAEEEK 1258
+AR E E +F +D R R N RLME ELP + ++E EEE+
Sbjct: 1237 QMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEE 1296
Query: 1259 QNVFVGGRGNRERRTAHYSDELSEEQWLRQFEVSENEDEE 1298
+ +F GRG+R+RR YSD L+E+QWLR E E+ E
Sbjct: 1297 EKIF--GRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME 1334
Score = 94.7 bits (234), Expect = 1e-18
Identities = 79/294 (26%), Positives = 134/294 (44%), Gaps = 19/294 (6%)
Query: 371 PEQGGIPG-STPLVPPISYTDLLN--QQNLSITPSLLPVGLDPRSAMETYQTLIALDLDT 427
P +PG S P P + +L Q+ I+P P GLDP ++ + L
Sbjct: 293 PPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQERE----YRLQA 348
Query: 428 SLDFCLQQL------LESDSQVKDKGELIMDYNAMQLLPLQKAIRGYVLSFEWYQSTLLT 481
+ +Q+L L D + K EL A++LL Q+ +R V++ +TL T
Sbjct: 349 RIAHRIQELENLPGSLPPDLRTKATVEL----KALRLLNFQRQLRQEVVACMRRDTTLET 404
Query: 482 NIHPNFLSKNRGLNIQDALLTRELFKSRXXXXXXXXXXXXXXXLNSILDRCKSIHDLRID 541
++ +++ +++A +T +L K + LNSIL K +
Sbjct: 405 ALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS 464
Query: 542 KKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITH 601
+ KL + H N E+E+ K ER K+R++ L A DEE Y KL+DQ KD R+ +
Sbjct: 465 VAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAY 524
Query: 602 LLKQTNTFLDSLTKAVKD--QQSFTKDKIESHLDTQELSEDNVGDKNGADSDDD 653
LL+QT+ ++ +LT V + Q K+K + ++ E+ G ++ D +
Sbjct: 525 LLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGE 578
Score = 65.9 bits (159), Expect = 5e-10
Identities = 33/111 (29%), Positives = 63/111 (56%)
Query: 1386 RSADNATKTLKERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKY 1445
R A K +++++ + D + Y+++ R+LS++F+ PS++ P+YY LI+
Sbjct: 1364 RGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRK 1423
Query: 1446 PAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELE 1496
P F+ + + I + Y SL + +D L+ NA+ +N E S I+ DS+ L+
Sbjct: 1424 PVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQ 1474
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 675 bits (1742), Expect = 0.0
Identities = 365/700 (52%), Positives = 473/700 (67%), Gaps = 42/700 (6%)
Query: 624 TKDKIESHLDTQELSEDN---VGDKNGADSDDDLE-----RERIDYYEVAHSIKEEVKQQ 675
T++KI +++E+SE + + + D DD+ R YY VAH+I E V++Q
Sbjct: 652 TEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQ 711
Query: 676 PSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGP 735
++L+ GTLK YQL+GL+WMVSL+NN+LNGILADEMGLGKTIQTI+L+TYL E K ++GP
Sbjct: 712 SALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGP 771
Query: 736 FLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIK 795
+L+IVPLSTL+NW EFDKWAP + KI++KG P R+ +++ +F+V+LTT+EYIIK
Sbjct: 772 YLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIK 831
Query: 796 ERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALL 855
++ +L+KI+W + I+DEGHRMKN KL+ LNT+Y + R++LTGTPLQN LPELWALL
Sbjct: 832 DKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALL 891
Query: 856 NFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKD 915
NF+LP IF S +F++WFN PFA TG +++ L+EEET+L+IRRLHKVLRPFLLRRLKK+
Sbjct: 892 NFLLPTIFKSCSTFEQWFNAPFAMTG--ERVDLNEEETILIIRRLHKVLRPFLLRRLKKE 949
Query: 916 VEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQK--FSSSRGFNNQIMQL 973
VE LP+KVE V+KC MSALQ LY+ M + + + + D S K ++ N IMQL
Sbjct: 950 VESQLPEKVEYVIKCDMSALQKILYRHM-QAKGILLTDGSEKDKKGKGGAKTLMNTIMQL 1008
Query: 974 RKICNHPFVFEEVEDQ-----------INPARETNDTIWRSAGKFELLERILPKFKATGH 1022
RKICNHP++F+ +E+ IN A ++R++GKFELL+RILPK +AT H
Sbjct: 1009 RKICNHPYMFQHIEESFAEHLGYSNGVINGAE-----LYRASGKFELLDRILPKLRATNH 1063
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
RVL+F QMT +M IMED+ + + YLRLDG TKS+DR ALL FN P S YF FLLSTR
Sbjct: 1064 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1123
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
AGGLGLNLQ ADTV+IFD+DWNPHQDLQAQDRAHRIGQ+NEVR+LRL T NSVEE IL
Sbjct: 1124 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1183
Query: 1143 AHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1202
A KL++D KVIQAG FD KS+
Sbjct: 1184 AKYKLNVDQKVIQAGMFDQKSS-------SHERRAFLQAILEHEEENEEEDEVPDDETLN 1236
Query: 1203 XXLARNENEIKVFQELDAQRIRTQMENGITN-RLMENSELPECY---NVDIEAKLAEEEK 1258
+AR E E +F +D R R N RLME ELP + ++E EEE+
Sbjct: 1237 QMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEE 1296
Query: 1259 QNVFVGGRGNRERRTAHYSDELSEEQWLRQFEVSENEDEE 1298
+ +F GRG+R+RR YSD L+E+QWLR E E+ E
Sbjct: 1297 EKIF--GRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME 1334
Score = 94.7 bits (234), Expect = 1e-18
Identities = 79/294 (26%), Positives = 134/294 (44%), Gaps = 19/294 (6%)
Query: 371 PEQGGIPG-STPLVPPISYTDLLN--QQNLSITPSLLPVGLDPRSAMETYQTLIALDLDT 427
P +PG S P P + +L Q+ I+P P GLDP ++ + L
Sbjct: 293 PPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQERE----YRLQA 348
Query: 428 SLDFCLQQL------LESDSQVKDKGELIMDYNAMQLLPLQKAIRGYVLSFEWYQSTLLT 481
+ +Q+L L D + K EL A++LL Q+ +R V++ +TL T
Sbjct: 349 RIAHRIQELENLPGSLPPDLRTKATVEL----KALRLLNFQRQLRQEVVACMRRDTTLET 404
Query: 482 NIHPNFLSKNRGLNIQDALLTRELFKSRXXXXXXXXXXXXXXXLNSILDRCKSIHDLRID 541
++ +++ +++A +T +L K + LNSIL K +
Sbjct: 405 ALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS 464
Query: 542 KKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITH 601
+ KL + H N E+E+ K ER K+R++ L A DEE Y KL+DQ KD R+ +
Sbjct: 465 VAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAY 524
Query: 602 LLKQTNTFLDSLTKAVKD--QQSFTKDKIESHLDTQELSEDNVGDKNGADSDDD 653
LL+QT+ ++ +LT V + Q K+K + ++ E+ G ++ D +
Sbjct: 525 LLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGE 578
Score = 59.7 bits (143), Expect = 4e-08
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 1417 NADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFA 1476
N+ R+LS++F+ PS++ P+YY LI+ P F+ + + I + Y SL + +D L+
Sbjct: 1413 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1472
Query: 1477 NARIYNTEDSIIFRDSLELE 1496
NA+ +N E S I+ DS+ L+
Sbjct: 1473 NAQTFNLEGSQIYEDSIVLQ 1492
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 672 bits (1733), Expect = 0.0
Identities = 352/657 (53%), Positives = 458/657 (69%), Gaps = 18/657 (2%)
Query: 651 DDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADE 710
DD+ E YY +AH+I E+V +Q SI+V GTLKEYQ+KGL+W+VSL+NN+LNGILADE
Sbjct: 740 DDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADE 799
Query: 711 MGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPME 770
MGLGKTIQTISL+TYL + K V GP+L+IVPLSTL NW EF+KWAP + +++KG P
Sbjct: 800 MGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQG 859
Query: 771 RKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTY 830
R+ Q ++ +F+V+LTT+EY+IK++ +L+KI+W + IIDEGHRMKN KL+ LNT+
Sbjct: 860 RRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTH 919
Query: 831 YHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSE 890
Y + YRL+LTGTPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+ L+E
Sbjct: 920 YIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNE 977
Query: 891 EETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLF 950
EET+L+IRRLHKVLRPFLLRRLKK+VE LPDKVE ++KC MSALQ LY+ M + + +
Sbjct: 978 EETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHM-QSKGVL 1036
Query: 951 IFDDSSNQKF--SSSRGFNNQIMQLRKICNHPFVFEEVEDQI-----NPARETNDTIWRS 1003
+ D S K ++ N I+QLRK+CNHPF+F+ +E++ + ++R
Sbjct: 1037 LTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRV 1096
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTAL 1063
+GKFELL+RILPK KAT HRVL+F QMTQ M I+ED+L + YLRLDG TK++DR L
Sbjct: 1097 SGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGEL 1156
Query: 1064 LNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1123
L FNA SD F FLLSTRAGGLGLNLQTADTV+IFD+DWNPHQDLQAQDRAHRIGQ+NE
Sbjct: 1157 LRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNE 1216
Query: 1124 VRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXX 1183
VR+LRL+T NSVEE IL A KL++D KVIQAG FD KST
Sbjct: 1217 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKST------GSERQQFLQTILH 1270
Query: 1184 XXXXXXXXXXXXXXXXXXXXXLARNENEIKVFQELDAQRIRTQME-NGITNRLMENSELP 1242
+AR+E EI++F+ +DA+R + E + RL++ SELP
Sbjct: 1271 QDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELP 1330
Query: 1243 ECYNV-DIEAKLAEEEKQNVFVGGRGNRERRTAHYSDELSEEQWLRQFEVSENEDEE 1298
+ D E + + + GRG+R+R+ Y+D L+E++WL+ + DEE
Sbjct: 1331 DWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAIDDGAEFDEE 1387
Score = 96.7 bits (239), Expect = 3e-19
Identities = 72/259 (27%), Positives = 123/259 (46%), Gaps = 7/259 (2%)
Query: 371 PEQGGIPGSTPLVPPISYTDLLNQQNLSITPSLLPVGLDPRSAMETYQTLIALDLDTSLD 430
P+ GG G VPP + + N IT PVGLDP + ++ + IA + SL
Sbjct: 370 PQPGG--GPQRQVPPAGMP--MPKPN-RITTVAKPVGLDPITLLQERENRIAARI--SLR 422
Query: 431 FCLQQLLESDSQVKDKGELIMDYNAMQLLPLQKAIRGYVLSFEWYQSTLLTNIHPNFLSK 490
Q L + + + ++ A+++L Q+ +R + +TL T ++ +
Sbjct: 423 MQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKR 482
Query: 491 NRGLNIQDALLTRELFKSRXXXXXXXXXXXXXXXLNSILDRCKSIHDLRIDKKAQRVKLG 550
+ +++A T +L K + L ++L K + + + KAQ ++
Sbjct: 483 TKRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMN 542
Query: 551 HRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFL 610
++N H N E+E+ K ER K+R++ L A DEE Y KL+DQ KD R+ LL QT+ ++
Sbjct: 543 KAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYI 602
Query: 611 DSLTKAVKDQQSFTKDKIE 629
+LT+ VK + K E
Sbjct: 603 SNLTQMVKQHKDDQMKKKE 621
Score = 71.2 bits (173), Expect = 1e-11
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 1378 RKNGRNYLRSADNATKTLKERQ-----EISQKARELYDYAVYYRNADDRRLSDIFLVKPS 1432
R+ +N +D+ + LK R+ + S+K AV N D R LS+ F+ PS
Sbjct: 1397 RRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPS 1456
Query: 1433 KRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDS 1492
++ PDYY +IK P + +++ I+ Y L ++ +DF + NA+IYN E S+I+ DS
Sbjct: 1457 RQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDS 1516
Query: 1493 LELEDAVIAKWKEMT 1507
+ L+ + + +T
Sbjct: 1517 IALQKVFVGARQRIT 1531
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 670 bits (1729), Expect = 0.0
Identities = 406/995 (40%), Positives = 558/995 (55%), Gaps = 114/995 (11%)
Query: 404 LPVGLDPRSAMETYQTLIALDLDTSLDFCLQQLLESDSQVKDKGELIMDYNAMQLLPLQK 463
+P G+DP ++ + +I + + + +K K E+ + A++L+ LQ
Sbjct: 169 VPSGIDPVGMLKQRENMIQNRIGLRMKLLNNLPADIPDHMKLKAEI--ELRALRLVNLQT 226
Query: 464 AIRGYVLSFEWYQSTLLTNIHPNFLSKNRGLNIQDALLTRELFKSRXXXXXXXXXXXXXX 523
+R V++ +TL T ++P + + ++++A +T +L K +
Sbjct: 227 QVRSEVMACLKRDTTLETALNPYAYRRTKRQSLREARVTEKLEKQQKMEQERKRRQKHTD 286
Query: 524 XLNSILDRCKSIHDLRIDKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKAND 583
+ +I+ K + + + K ++ H N E+E K RN K R+Q L D
Sbjct: 287 LMQAIIQHGKEFKEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIRNEKLRMQKLMQED 346
Query: 584 ------------EEAYIKLLDQTK---DTRITHLLKQTNTFLD----------------- 611
++ + LL QT D+ + + + NT
Sbjct: 347 EEGYRALLDEKKDQRLVYLLQQTDEYVDSLCSLVRQHQNTEKKKKKEDKKIEKGNQMDEE 406
Query: 612 --------SLTKAVKDQQSFTKDKIESHLDTQ---------ELSEDNVGDKNGA------ 648
S KA+ Q+ ++IE L+T +LS+D ++ A
Sbjct: 407 ARVHVRERSTGKALTGDQAPKTEEIEFWLETHPEYEIVPRDQLSDDEEEEEEEAPVEPEE 466
Query: 649 ---------------------------DSDDDLERERIDYYEVAHSIKEEVKQQPSILVG 681
+ D +++ DYY AH IKE+V +Q + + G
Sbjct: 467 EKDDQYAGMDEETKAKMILEKARNEEDEYDQKTKKQMADYYATAHKIKEKVVKQHTTMGG 526
Query: 682 GT----LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFL 737
G LK YQ+KGL+WMVSL+NN+LNGILADEMGLGKTIQTISL+TYL E K +GP+L
Sbjct: 527 GDPNLLLKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYL 586
Query: 738 VIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKER 797
VIVPLSTL+NW EF KWAP + I +KG R+ + I+ F+V++TT+EY+IKE+
Sbjct: 587 VIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEGQIRKGAFNVLMTTYEYVIKEK 646
Query: 798 PLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNF 857
LL KI+W + IIDEGHR+KN KL+L LN ++H+ +RL+LTGTPLQN LPELWALLNF
Sbjct: 647 ALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNF 706
Query: 858 VLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVE 917
+LP IF+S +F++WFN PFA TG +K+ L++EET+L+IRRLHKVLRPFLLRRLKK+VE
Sbjct: 707 LLPSIFSSCGTFEQWFNAPFATTG--EKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVE 764
Query: 918 KDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKIC 977
LPDK E V+KC SALQ +Y+ M K L + S +R N ++ LRK+C
Sbjct: 765 SQLPDKTEYVIKCDQSALQKVIYRHMQKGLLL------DAKMSSGARSLMNTVVHLRKLC 818
Query: 978 NHPFVFEEVEDQINPARETNDT----IWRSAGKFELLERILPKFKATGHRVLIFFQMTQV 1033
NHPF+F +ED + N+ + R AGK ELL+RILPK KATGHR+L+FFQMT +
Sbjct: 819 NHPFLFPNIEDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSM 878
Query: 1034 MDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTA 1093
M+I EDFL + YLRLDG TK D+R LL FNAPNSD F F+LSTRAGGLGLNLQTA
Sbjct: 879 MNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTA 938
Query: 1094 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
DTVIIFD+DWNPHQD+QAQDRAHRIGQK EVR+LRLIT NSVEE IL A KL++D KV
Sbjct: 939 DTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKV 998
Query: 1154 IQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARNENEIK 1213
IQAGKFD +ST +AR+E E
Sbjct: 999 IQAGKFDQRST-------GAERKQMLEQIIQADGEEEEEEEVPDDETVNQMVARSEEEFN 1051
Query: 1214 VFQELDAQRIRTQMEN-GITNRLMENSELPE-----CYNVDIEAKLAEEEKQNVFVGGRG 1267
+FQ +D R R + RL+E E+P+ ++ + + EE ++ V
Sbjct: 1052 IFQSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTPNQ 1111
Query: 1268 NRERRTAHY-SDELSEEQWLRQFEVSENEDEEGDA 1301
R RR Y SD LS+EQ+++Q E E+E+ + A
Sbjct: 1112 RRRRREVDYSSDLLSDEQFMKQVEEVEDENNQAVA 1146
Score = 70.1 bits (170), Expect = 3e-11
Identities = 35/113 (30%), Positives = 62/113 (53%), Gaps = 4/113 (3%)
Query: 1393 KTLKERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENV 1452
K K E+++K E+ D + Y+N D ++D+F P+++ PDYY +I P F+ +
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 1453 MKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELEDAVIAKWKE 1505
K I+ Y ++++ +D +L+ NA+ YN E S I+ S + + WKE
Sbjct: 1234 NKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSS----ETIGKLWKE 1282
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 608 bits (1569), Expect = e-173
Identities = 352/755 (46%), Positives = 471/755 (61%), Gaps = 55/755 (7%)
Query: 566 KRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQS--- 622
+R R K RL ALK++D+EAY+KL+ ++K+ R+T LL++TN L +L AV+ Q+
Sbjct: 296 QRATRAEKLRLMALKSDDQEAYMKLVKESKNERLTTLLEETNKLLANLGAAVQRQKDAKL 355
Query: 623 -----FTKDKIE--SHLDT------QELSEDNVGDKNGADSDDD----LERERIDYYEVA 665
KD S LD Q+L D D +D++DD LE +R Y
Sbjct: 356 PEGIDLLKDSESDLSELDAPRSEPLQDLLPDQDIDITESDNNDDSNDLLEGQR-QYNSAI 414
Query: 666 HSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 725
HSI+E+V +QPS+L GG L+ YQL+GLQWMVSLFNN+LNGILADEMGLGKTIQTISL+ Y
Sbjct: 415 HSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAY 474
Query: 726 LYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP-KQALIKNREFD 784
L E KGV GP+L++ P + L NW EF W P + + G ERK ++ + +F+
Sbjct: 475 LLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFN 534
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
V++T ++ I++++ L KI+W + I+DEGHR+KN +S L+ TL T Y RL+LTGTP+
Sbjct: 535 VLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPI 594
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QN+L ELW+LLNF+LP IFNSV++F+EWFN PFA+ G ++L++EE LL+I RLH V+
Sbjct: 595 QNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGN---VSLTDEEELLIIHRLHHVI 651
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
RPF+LRR K +VEK LP K + +LKC MSA Q Y+Q+ R+ + S S+
Sbjct: 652 RPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGK-----SK 706
Query: 965 GFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRV 1024
N MQLRK CNHP++F V N ++ I R++GKFELL+R+LPK + GHR+
Sbjct: 707 SLQNLTMQLRKCCNHPYLF--VGGDYNMWKKPE--IVRASGKFELLDRLLPKLRKAGHRI 762
Query: 1025 LIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAG 1084
L+F QMT+++D++E +L D KYLRLDG TK+D R LL FN P+S YF FLLSTRAG
Sbjct: 763 LLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAG 822
Query: 1085 GLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAH 1144
GLGLNLQTADTVIIFD+DWNP D QA+DRAHRIGQK EVR+ L++ SVEE IL++A
Sbjct: 823 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAK 882
Query: 1145 AKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1204
K+ ID KVIQAG F+ ST
Sbjct: 883 QKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSSLGTDVPSEREINRLA------- 935
Query: 1205 LARNENEIKVFQELDAQRIRTQMENGITNRLMENSELPE-CYNVDIEAKLAEEEKQN--- 1260
AR+E+E +F+ +D +R R + RLM+ E+PE Y +EEK N
Sbjct: 936 -ARSEDEFWMFERMDEERRR---KENYRARLMQEQEVPEWAYTTQ-----TQEEKLNNGK 986
Query: 1261 -VFVGGRGNRERRTAHYSDELSEEQWLRQFEVSEN 1294
F G R+R+ YSD LSE QWL+ E E+
Sbjct: 987 FHFGSVTGKRKRKEIVYSDTLSELQWLKAVESGED 1021
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 593 bits (1529), Expect = e-169
Identities = 335/736 (45%), Positives = 456/736 (61%), Gaps = 38/736 (5%)
Query: 563 EELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQS 622
++ +R R K R+ ALK++D+E Y+KL + + +Q + L TK +K +S
Sbjct: 251 KQRQRATRAEKLRIMALKSDDQEEYMKLAKEIQ--------RQKDAKLSENTKLLKGSES 302
Query: 623 FTKD--KIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILV 680
D E L Q++ + + N DS+D LE ER + HSI+E+V +QPS+L
Sbjct: 303 DLSDVDAPEDVLPAQDI--EIIDSDNNDDSNDLLEGER-QFNLAIHSIQEKVTKQPSLLQ 359
Query: 681 GGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIV 740
GG L+ YQL+GLQWMVSL+NN NGILADEMGLGKTIQTI+L+ YL E+K +HGP L++
Sbjct: 360 GGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILA 419
Query: 741 PLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLL 800
P + L NW EF WAP + + G +R +A I +F+V++T ++ I++++ L
Sbjct: 420 PKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAGGKFNVLITHYDLIMRDKAFL 479
Query: 801 SKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLP 860
KI W + I+DEGHR+KN + L+ TL T Y RL+LTGTP+QN+L ELW+LLNF+LP
Sbjct: 480 KKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLP 539
Query: 861 KIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDL 920
IFNS+ +F+EWFNTPFA G +L++EE LL+I RLH V+RPFLLRR K +VEK L
Sbjct: 540 HIFNSIHNFEEWFNTPFAECG---SASLTDEEELLIINRLHHVIRPFLLRRKKSEVEKFL 596
Query: 921 PDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHP 980
P K + +LKC MSA Q Y+Q+ R+ + S N K S+ N MQLRK CNHP
Sbjct: 597 PGKTQVILKCDMSAWQKLYYKQVTDVGRVGL--HSGNGK---SKSLQNLTMQLRKCCNHP 651
Query: 981 FVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDF 1040
++F + + E I R++GKFELL+R+LPK K GHR+L+F QMT+++D++E +
Sbjct: 652 YLFVGADYNMCKKPE----IVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIY 707
Query: 1041 LRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFD 1100
L D YLRLDG TK+D R LL FN P+S YF FLLSTRAGGLGLNLQTADT+IIFD
Sbjct: 708 LSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFD 767
Query: 1101 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
+DWNP D QA+DRAHRIGQK EVR+ L++ S+EE IL++A K+ ID KVIQAG F+
Sbjct: 768 SDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLFN 827
Query: 1161 NKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARNENEIKVFQELDA 1220
ST AR E E +F+++D
Sbjct: 828 TTSTAQDRREMLEEIMSKGTSSLGEDVPSEREINRLA--------ARTEEEFWMFEQMDE 879
Query: 1221 QRIRTQMENGITNRLMENSELPECYNVDIEAKLAEEEKQNVFVGGRGNRERRTAHYSDEL 1280
+R + + RLME E+PE + E + + +N F G R+R+ A YSD L
Sbjct: 880 ER---RKKENYKTRLMEEKEVPE-WAYTSETQEDKTNAKNHFGSLTGKRKRKEAVYSDSL 935
Query: 1281 SEEQWLRQFEVSENED 1296
S+ QW++ E SE+ED
Sbjct: 936 SDLQWMKAME-SEDED 950
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 559 bits (1441), Expect = e-158
Identities = 329/834 (39%), Positives = 476/834 (56%), Gaps = 69/834 (8%)
Query: 433 LQQLLESDSQVKDKGELIMDYNAMQLLPLQKAIRG-YVLSFEWYQSTLLTNIHPNFLSKN 491
L++ + + K + +++ +QLL LQ+ +R +V +F +T + ++ ++
Sbjct: 521 LKESVSLSDDISAKTKSVIELKKLQLLNLQRRLRSEFVYNFFKPIATDVEHLK-SYKKHK 579
Query: 492 RGLNIQDALLTRELFKSRXXXXXXXXXXXXXXXLNSILDRCKSIHDLRIDKKAQRVKLGH 551
G I+ + K L ++ + + +R +R+K +
Sbjct: 580 HGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHKEKLEDLFKVR----RERLKGFN 635
Query: 552 RLIN-LHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFL 610
R H E+ ++I++ ++++ LK ND E Y++++ K R+ LLK+T +L
Sbjct: 636 RYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQDAKSDRVKQLLKETEKYL 695
Query: 611 DSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDY--------- 661
L +K+ + T + E+ D S + D+ +++D+ ++ + Y
Sbjct: 696 QKLGSKLKEAKLLTS-RFENEADETRTS-NATDDETLIENEDESDQAKASYISAFFHLFL 753
Query: 662 -----------------YEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLN 704
Y +AHSIKE + +QPS LVGG L+EYQ+ GL+W+VSL+NNHLN
Sbjct: 754 MVMIHTIQHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLN 813
Query: 705 GILADEMGLGKTIQ--------TISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWA 756
GILADEMGLGKT+Q ISL+ YL E K GPFLV+VP S L W +E + WA
Sbjct: 814 GILADEMGLGKTVQMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 873
Query: 757 PKLRKIAFKGPPMERKPK-QALIKNREFDVVLTTFEYIIK--ERPLLSKIKWVHTIIDEG 813
P + KI + G P ER+ + I +++F+V+LTT+EY++ +RP LSKI W + IIDEG
Sbjct: 874 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 933
Query: 814 HRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWF 873
HR+KNA KL+ L +Y S +RL+LTGTPLQNNL ELWALLNF+LP IFNS + F +WF
Sbjct: 934 HRIKNASCKLNADLK-HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 992
Query: 874 NTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMS 933
N PF + G+ LSEEE LL+I RLH+VLRPF+LRRLK VE +LP+K+E++++C+ S
Sbjct: 993 NKPF-QSNGESSALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEAS 1051
Query: 934 ALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPA 993
A YQ++L R + D+ + + SR +N +M+LR ICNHP++ Q++
Sbjct: 1052 A-----YQKLLMKR---VEDNLGSIGNAKSRAVHNSVMELRNICNHPYL-----SQLHSE 1098
Query: 994 RETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDG 1053
I R GK E+L+R+LPK KAT HRVL F MT+++D+MED+L KYLRLDG
Sbjct: 1099 EHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDG 1158
Query: 1054 HTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 1113
T DR AL++ FN S +F FLLS RAGG+G+NLQ ADTVI+FDTDWNP DLQAQ
Sbjct: 1159 QTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1218
Query: 1114 RAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKSTXXXXXXXXX 1173
RAHRIGQK +V +LR T NSVEE + A KL + + I AG FDN ++
Sbjct: 1219 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTS--------A 1270
Query: 1174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARNENEIKVFQELDAQRIRTQM 1227
+AR E+EI +F+ +D QR +M
Sbjct: 1271 EDRKEYLESLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENEM 1324
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 475 bits (1222), Expect = e-133
Identities = 260/599 (43%), Positives = 371/599 (61%), Gaps = 36/599 (6%)
Query: 561 EKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQ 620
EK LK +++ KQ++Q + + + ++ R+ +LL+QT F A D
Sbjct: 80 EKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHF---AKSDG 136
Query: 621 QSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILV 680
S K +++E+ ++ + +D L S + QPS +
Sbjct: 137 SSSQKKAKGRGRHASKITEEEEDEEYLKEEEDGL----------TGSGNTRLLTQPSC-I 185
Query: 681 GGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIV 740
G +++YQL GL W++ L+ N +NGILADEMGLGKT+QTISLL YL+E +G++GP +V+
Sbjct: 186 QGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA 245
Query: 741 PLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP-KQALIKNREFDVVLTTFEYIIKERPL 799
P STL NW E ++ P LR + F G P ER+ ++ L+ +FD+ +T+FE IKE+
Sbjct: 246 PKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTA 305
Query: 800 LSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVL 859
L + W + IIDE HR+KN S LS T+ + ++YRL++TGTPLQNNL ELWALLNF+L
Sbjct: 306 LRRFSWRYIIIDEAHRIKNENSLLSKTMRLF-STNYRLLITGTPLQNNLHELWALLNFLL 364
Query: 860 PKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKD 919
P+IF+S ++FDEWF E + V+++LHKVLRPFLLRRLK DVEK
Sbjct: 365 PEIFSSAETFDEWFQIS------------GENDQQEVVQQLHKVLRPFLLRRLKSDVEKG 412
Query: 920 LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNH 979
LP K E +LK MS +Q + Y+ +L+ D + + N MQLRK CNH
Sbjct: 413 LPPKKETILKVGMSQMQKQYYKALLQK------DLEAVNAGGERKRLLNIAMQLRKCCNH 466
Query: 980 PFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMED 1039
P++F+ E P T D + +AGK LL+++LPK K RVLIF QMT+++DI+ED
Sbjct: 467 PYLFQGAEP--GPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILED 524
Query: 1040 FLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIF 1099
+L Y Y R+DG+T D+R A + +N P S+ F FLLSTRAGGLG+NL TAD VI++
Sbjct: 525 YLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILY 584
Query: 1100 DTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
D+DWNP DLQAQDRAHRIGQK EV++ R T++++EE ++++A+ KL +D VIQ G+
Sbjct: 585 DSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGR 643
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 469 bits (1208), Expect = e-131
Identities = 261/608 (42%), Positives = 373/608 (60%), Gaps = 48/608 (7%)
Query: 569 ERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKI 628
E + + +A + E+A +K + + K +I +L N +D+ D Q+ ++
Sbjct: 70 EEDEEDEEKAEISKREKARLKEMQKMKKQKIQQILDSQNASIDA------DMQT----EL 119
Query: 629 ESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEE-----------VKQQPS 677
+H + S K L E D +KEE + QP+
Sbjct: 120 FAHFAKSDPSPSQKKGKGRGRHSSKLTEEEED----EECLKEEEGGIVGSGGTRLLTQPA 175
Query: 678 ILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFL 737
+ G L++YQL GL W++ L+ N +NGILADEMGLGKT+QTISLL YL+E +G++GP +
Sbjct: 176 C-IQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHM 234
Query: 738 VIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP-KQALIKNREFDVVLTTFEYIIKE 796
V+ P STL NW E ++ P LR + F G P ER+ ++ L+ +FD+ +T+FE IKE
Sbjct: 235 VVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIKE 294
Query: 797 RPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLN 856
+ L + W + IIDE HR+KN S LS T+ + ++YRL++TGTPLQNNL ELWALLN
Sbjct: 295 KTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLF-STNYRLLITGTPLQNNLHELWALLN 353
Query: 857 FVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDV 916
F+LP++F+S ++FDEWF E + V+++LHKVLRPFLLRRLK DV
Sbjct: 354 FLLPEVFSSAETFDEWFQIS------------GENDQQEVVQQLHKVLRPFLLRRLKSDV 401
Query: 917 EKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKI 976
EK LP K E +LK MS +Q + Y+ +L+ + L + + +K N MQLRK
Sbjct: 402 EKGLPPKKETILKVGMSQMQKQYYKALLQ-KDLEVVNGGGERK-----RLLNIAMQLRKC 455
Query: 977 CNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDI 1036
CNHP++F+ E P T D + +AGK LL+++LPK K RVLIF QMT+++DI
Sbjct: 456 CNHPYLFQGAEP--GPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDI 513
Query: 1037 MEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTV 1096
+ED+L Y +Y R+DG+T D+R A + +N P S+ F FLLSTRAGGLG+NL TAD V
Sbjct: 514 LEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVV 573
Query: 1097 IIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQA 1156
I++D+DWNP DLQAQDRAHRIGQK EV++ R T+N++E ++++A+ KL +D VIQ
Sbjct: 574 ILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQ 633
Query: 1157 GKFDNKST 1164
G+ + T
Sbjct: 634 GRLAEQKT 641
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 453 bits (1166), Expect = e-127
Identities = 253/605 (41%), Positives = 367/605 (59%), Gaps = 35/605 (5%)
Query: 564 ELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSF 623
E++ I +A Q + Y + + + R +LLKQT F + A Q
Sbjct: 57 EMEEIFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAA---QKT 113
Query: 624 TKDKIESHLDTQELSED------NVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPS 677
++ + +D +VGD ++ + + E + A ++ + PS
Sbjct: 114 PTSPLKMKPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPS 173
Query: 678 ILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFL 737
+ G L++YQ++GL W++SL+ N +NGILADEMGLGKT+QTISLL Y+ + + GP +
Sbjct: 174 YVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHM 233
Query: 738 VIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKN----REFDVVLTTFEYI 793
V+VP STL NW +EF +W P LR + G +++ + A +++ E+DV +T++E +
Sbjct: 234 VLVPKSTLHNWMSEFKRWVPTLRSVCLIG---DKEQRAAFVRDVLLPGEWDVCVTSYEML 290
Query: 794 IKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWA 853
IKE+ + K W + +IDE HR+KN +SKLS + + ++ RL+LTGTPLQNNL ELW+
Sbjct: 291 IKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTN-RLLLTGTPLQNNLHELWS 349
Query: 854 LLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLK 913
LLNF+LP +FNS FD WF+T N G K+ + RLH VLRPFLLRR+K
Sbjct: 350 LLNFLLPDVFNSADDFDSWFDTN--NCLGDQKL----------VERLHMVLRPFLLRRIK 397
Query: 914 KDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQL 973
DVEK LP K E + +S +Q + Y ++L + + I + + K R N +MQL
Sbjct: 398 ADVEKSLPPKKEVKIYVGLSKMQREWYTRILM-KDIDILNSAG--KMDKMR-LLNILMQL 453
Query: 974 RKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQV 1033
RK CNHP++F+ E P T+ + ++GK +L+++LPK K G RVLIF QMT+V
Sbjct: 454 RKCCNHPYLFDGAEP--GPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRV 511
Query: 1034 MDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTA 1093
+DI+ED+ + + +Y RLDG T D+R +N +N PNS F F+LSTRAGGLG+NL TA
Sbjct: 512 LDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATA 571
Query: 1094 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
D VI++D+DWNP DLQA DRAHRIGQ VR+ R ITDN+VEE I+++A KL +D V
Sbjct: 572 DVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIV 631
Query: 1154 IQAGK 1158
IQ G+
Sbjct: 632 IQQGR 636
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 446 bits (1147), Expect = e-124
Identities = 246/563 (43%), Positives = 355/563 (62%), Gaps = 33/563 (5%)
Query: 596 DTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLE 655
D I LLKQ ++ + L+K+ S ++ H E ED A+ D E
Sbjct: 112 DKNIQKLLKQLDSDANKLSKSHSTVSSSSR-----HHRKTEKEED-------AELMADEE 159
Query: 656 RERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGK 715
E +D Y+ + E PS + G L++YQ++GL W++SL N L+GILADEMGLGK
Sbjct: 160 EEIVDTYQEDIFVSES----PSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGK 215
Query: 716 TIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP-K 774
T+QTIS L YL K + GPFL+IVP STL NW EF KW P + + G R
Sbjct: 216 TLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIV 275
Query: 775 QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSD 834
+ +I FDV++T++E +I+E+ L ++ W + +IDE HR+KN QS LS + +Y S
Sbjct: 276 RNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFY-SK 334
Query: 835 YRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETL 894
RL++TGTPLQNNL ELWALLNF+LP IF + FDEWF Q+ SE++
Sbjct: 335 NRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE--------QNN---SEQDQE 383
Query: 895 LVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDD 954
+VI++LH VL PFLLRR+K DVEK L K+E + M+ +Q + Y+ +L+ + + +
Sbjct: 384 IVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLE-KDIDAVNG 442
Query: 955 SSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERIL 1014
+ ++ +R N +MQLRK CNHP++FE E P T++ + ++GK +L+++L
Sbjct: 443 AVGKREGKTR-LLNIVMQLRKCCNHPYLFEGAEP--GPPYTTDEHLIFNSGKMIILDKLL 499
Query: 1015 PKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDY 1074
+ K G RVLIF QM++++DI+ED+ + D +Y R+DG T ++R ++ +N PNS+
Sbjct: 500 KRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEK 559
Query: 1075 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNS 1134
F FLL+TRAGGLG+NL TADTVI+FD+DWNP DLQA DRAHRIGQK +V + R +T+N+
Sbjct: 560 FVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENA 619
Query: 1135 VEEAILDKAHAKLDIDGKVIQAG 1157
+EE ++++A KL +D VIQ G
Sbjct: 620 IEEKVIERAAQKLRLDQLVIQQG 642
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 446 bits (1146), Expect = e-124
Identities = 261/626 (41%), Positives = 370/626 (58%), Gaps = 53/626 (8%)
Query: 561 EKEELKRIERNAKQRLQ-ALKANDEEA-----YIKLLDQTKDTRITHLLKQTNTFLDSLT 614
EK E K+ + + +L+ A KA E Y + + + R LLKQT F +
Sbjct: 51 EKGEKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQ 110
Query: 615 KAVKDQQSFTKDKIESHLDTQELSED------NVGDKNGADSDDDLERERIDYYEVAHSI 668
+ Q + L + +D + GD ++ + + E + ++
Sbjct: 111 PSA---QKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNV 167
Query: 669 KEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYE 728
+ PS + GG L++YQ++GL W++SL+ N +NGILADEMGLGKT+QTI+LL YL
Sbjct: 168 CIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKH 227
Query: 729 AKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNR----EFD 784
+ + GP +V+VP STL NW EF +W P LR I F G ++ + A I++ E+D
Sbjct: 228 YRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG---DKDARAAFIRDEMMPGEWD 284
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
V +T++E +IKE+ + K W + +IDE HR+KN +SKLS + + S RL+LTGTPL
Sbjct: 285 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF-KSTNRLLLTGTPL 343
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QNNL ELWALLNF+LP +FNS FD WF+T N G K+ + RLH VL
Sbjct: 344 QNNLHELWALLNFLLPDVFNSADDFDSWFDTK--NCLGDQKL----------VERLHAVL 391
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
+PFLLRR+K DVEK LP K E + +S +Q + Y ++L + + + + S K R
Sbjct: 392 KPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILM-KDIDVLNSSG--KMDKMR 448
Query: 965 GFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRV 1024
N +MQLRK CNHP++F+ E P T++ I ++GK +L+++L K K G RV
Sbjct: 449 -LLNILMQLRKCCNHPYLFDGAEP--GPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRV 505
Query: 1025 LIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRT------------ALLNTFNAPNS 1072
LIF QMT+++DI+ED+ + +Y RLDG T ++R + FNAPNS
Sbjct: 506 LIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNS 565
Query: 1073 DYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITD 1132
F F+LSTRAGGLG+NL +AD VI++D+DWNP DLQA DRAHRIGQK VR+ RLITD
Sbjct: 566 SKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITD 625
Query: 1133 NSVEEAILDKAHAKLDIDGKVIQAGK 1158
N+VEE I+++A KL +D VIQ G+
Sbjct: 626 NTVEERIVERAEIKLRLDSIVIQQGR 651
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 444 bits (1143), Expect = e-124
Identities = 256/583 (43%), Positives = 350/583 (59%), Gaps = 27/583 (4%)
Query: 584 EEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVG 643
E + ++ + R LLKQT F +T + K S TK K + E +V
Sbjct: 32 EAEFDNKIEADRSRRFDFLLKQTEIFTHFMTNSAK---SPTKPKGRPKKIKDKDKEKDVA 88
Query: 644 DKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHL 703
D ++ + + E + I P+ + G +++YQ++GL WM+SL+ N +
Sbjct: 89 DHRHRKTEQEEDEELLAEDSATKEIFR-FDASPAYIKSGEMRDYQIRGLNWMISLYENGI 147
Query: 704 NGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIA 763
NGILADEMGLGKT+QTISLL YL K GP +VIVP STL NW EF KW P LR +
Sbjct: 148 NGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVC 207
Query: 764 FKGPPMERKPK-QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSK 822
G R + ++ E+DV +T++E I+E+ + K W + +IDE HR+KN +SK
Sbjct: 208 LIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSK 267
Query: 823 LSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG- 881
LS L + ++ RL++TGTPLQNNL ELWALLNF+LP +FNS + FDEWFNT NT
Sbjct: 268 LSEILREFKTAN-RLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNT---NTCL 323
Query: 882 GQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQ 941
G D + I RLH VL+PFLLRRLK +VEK L K E + +S +Q Y
Sbjct: 324 GDDAL----------ITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYT 373
Query: 942 QMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIW 1001
++L L D + N +MQLRK NHP++F+ E P T+ +
Sbjct: 374 KVL----LKDIDVVNGAGKVEKMRLQNILMQLRKCTNHPYLFDGAEP--GPPYTTDTHLV 427
Query: 1002 RSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRT 1061
++GK +L+++LPK + G RVLIF QMT+++DI+ED+ + + Y RLDG T +DR
Sbjct: 428 YNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRN 487
Query: 1062 ALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1121
+ FN NS F F+LSTRAGGLG+NL TAD VII+D+DWNP DLQA DRAHRIGQK
Sbjct: 488 RQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQK 547
Query: 1122 NEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKF-DNKS 1163
+VR+ RLIT+++VEE I+++A KL +D VIQ G+ DN+S
Sbjct: 548 KQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRS 590
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 444 bits (1142), Expect = e-124
Identities = 251/574 (43%), Positives = 358/574 (61%), Gaps = 39/574 (6%)
Query: 598 RITHLLKQTNTFLDSL-TKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLER 656
R HLL + F + +KA KD K LD + E+N + G D+ R
Sbjct: 108 RFEHLLSLSGLFKHFIESKAAKDP------KFRQVLD---VLEENKANGKGKGKHQDVRR 158
Query: 657 ERIDYYEVAHSIKEE-----------VKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNG 705
+ ++ E A +KEE ++ P+ V G L+ YQ++G+ W+VSL N + G
Sbjct: 159 RKTEHEEDAELLKEEDSDDDESIEFQFRESPAY-VNGQLRPYQIQGVNWLVSLHKNKIAG 217
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFK 765
ILADEMGLGKT+QTIS L YL + + GPFLVI P STL NW E ++W P + +
Sbjct: 218 ILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQ 277
Query: 766 GPPMERKPK-QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLS 824
G ER Q + +FDVV+ ++E II+E+ L KI W + IIDE HR+KN +S LS
Sbjct: 278 GDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLS 337
Query: 825 LTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQD 884
L + S RL++TGTPLQNNL ELWALLNF+LP IF+ + FD+WF++
Sbjct: 338 QVLREFT-SRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSES------- 389
Query: 885 KIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQML 944
+EE+ ++++LH VL+PFLLRR+K DVE L K E L MS++Q K Y+++L
Sbjct: 390 ----TEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKIL 445
Query: 945 KHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSA 1004
+ + L + S+ K S +R N +MQLRK CNHP++F+ E P T++ + +A
Sbjct: 446 E-KDLDAVNGSNGSKESKTR-LLNIMMQLRKCCNHPYLFDGAEP--GPPYTTDEHLVYNA 501
Query: 1005 GKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALL 1064
K ++L+++L K K G RVLIF QM++++DI+ED+ + + +Y R+DG T +DR +
Sbjct: 502 AKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAI 561
Query: 1065 NTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1124
+ +NAP+S F FLL+TRAGGLG+NL +AD V+++D+DWNP DLQA DRAHRIGQK +V
Sbjct: 562 DDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQV 621
Query: 1125 RILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
++ RL+TDNSVEE IL++A KL +D VIQ +
Sbjct: 622 KVFRLVTDNSVEEKILERATQKLRLDQLVIQQNR 655
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 427 bits (1099), Expect = e-119
Identities = 238/521 (45%), Positives = 333/521 (63%), Gaps = 26/521 (4%)
Query: 645 KNGADSDDDLER--ERIDYYEVAHSIKEE----VKQQPSILVGGTLKEYQLKGLQWMVSL 698
KNG D D + + D VA +IK + + P + G +++YQ++GL W+ SL
Sbjct: 49 KNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIFDKSPFYIENGEMRDYQVRGLNWLASL 108
Query: 699 FNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPK 758
+N +NGILADEMGLGKT+QTIS++ Y+ K P LVIVP STL NW EF KW P
Sbjct: 109 QHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPS 168
Query: 759 LRKIAFKGPPMERKPK-QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMK 817
+ + G R + +I ++FDV TT+E ++K + L K+ W + IIDE HR+K
Sbjct: 169 INAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIK 228
Query: 818 NAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPF 877
N +SKLS T+ +S+ RL++TGTPLQNNL ELWALLNF+LP IF S FD WF+
Sbjct: 229 NEKSKLSETVREL-NSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSND- 286
Query: 878 ANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQH 937
A +G D +++RLHKVL+PFLLRR+K DVEK L K E + +S +Q
Sbjct: 287 AMSGNTD-----------LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQR 335
Query: 938 KLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETN 997
+ Y ++L + + I + + K +R N +M LRK NHP++F+ E P T+
Sbjct: 336 EWYTKVLM-KDIDIINGAG--KVEKAR-LMNILMHLRKCVNHPYLFDGAEP--GPPFTTD 389
Query: 998 DTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKS 1057
+ ++GK +L+++L KFK G RVLIF Q ++++D++EDF + +Y RLDG T
Sbjct: 390 QHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPH 449
Query: 1058 DDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 1117
+DR+ + +NAP+S F F+L+TRAGGLG+NL TAD VII+D+DWNP DLQA DRAHR
Sbjct: 450 EDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHR 509
Query: 1118 IGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
IGQK +VR+ RLIT+N+V+E I++KA AKL +D VIQ G+
Sbjct: 510 IGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGR 550
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 427 bits (1099), Expect = e-119
Identities = 263/714 (36%), Positives = 388/714 (53%), Gaps = 98/714 (13%)
Query: 661 YYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTI 720
YY +AH++ E V +QPS+L GTL++YQL GLQWM+SL+NN LNGILADEMGLGKT+Q +
Sbjct: 11 YYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVM 70
Query: 721 SLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKN 780
+L+ YL E KG +GP L+IVP + L NW +E W P + I + G +R + +K
Sbjct: 71 ALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVKF 130
Query: 781 REFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILT 840
+F+V++TT+E+I+ +R LSK+ W + IIDE RMK+ +S L+ L+ Y RL+LT
Sbjct: 131 EKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR-YRCQRRLLLT 189
Query: 841 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIA---LSEEETLLVI 897
GTPLQN+L ELW+LLN +LP +F++ K+F +WF PF G I L E+ ++VI
Sbjct: 190 GTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVI 249
Query: 898 RRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSN 957
RLH++L PF+LRR +DVE LP KV VL+C+MSA+Q +Y + L + D
Sbjct: 250 HRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEK 309
Query: 958 QKFSSS--------RGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFEL 1009
+ + R NN+ M+LRK CNHP + + + D + RS GK +
Sbjct: 310 LRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDF-----SKDFLVRSCGKLWI 364
Query: 1010 LERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNA 1069
L+RIL K + TGHRVL+F MT+++DI+E++L++ + Y R+DG T +DR + + FN
Sbjct: 365 LDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFND 424
Query: 1070 PNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 1129
P++D F FLLS RA G GLNLQTADTV+I+D D NP + QA RAHRIGQ EV+++ +
Sbjct: 425 PDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYM 484
Query: 1130 -----------------------ITDN---------SVEEAILDKAHA-KLDIDGKVIQA 1156
+ D+ S+E I + K+D+ +VI A
Sbjct: 485 EAVVEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINA 544
Query: 1157 GKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARNENEIKVFQ 1216
G+FD ++T +AR+E E+++F
Sbjct: 545 GRFDQRTT------HEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFD 598
Query: 1217 ELDAQRIRTQMENGITNRLMENSELPECYNV---DIEAKLAEEEKQ---------NVFV- 1263
++D E T + + ++P+ ++ A +A+ K+ N+ V
Sbjct: 599 QMDE-------EFDWTEEMTNHEQVPKWLRASTREVNATVADLSKKPSKNMLSSSNLIVQ 651
Query: 1264 -GGRGNRERR----------------TAHYSDELSEEQWLRQFEVSENEDEEGD 1300
GG G +R A YS+E SEE+ + +EEGD
Sbjct: 652 PGGPGGERKRGRPKSKKINYKEIEDDIAGYSEESSEER-----NIDSGNEEEGD 700
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 409 bits (1051), Expect = e-113
Identities = 248/626 (39%), Positives = 354/626 (55%), Gaps = 74/626 (11%)
Query: 561 EKEELKRIERNAKQRLQ-ALKANDEEA-----YIKLLDQTKDTRITHLLKQTNTFLDSLT 614
EK E K+ + + +L+ A KA E Y + + + R LLKQT F +
Sbjct: 51 EKGEKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQ 110
Query: 615 KAVKDQQSFTKDKIESHLDTQELSED------NVGDKNGADSDDDLERERIDYYEVAHSI 668
+ Q + L + +D + GD ++ + + E + ++
Sbjct: 111 PSA---QKSPTSPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNV 167
Query: 669 KEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYE 728
+ PS + GG L++YQ++GL W++SL+ N +NGILADE
Sbjct: 168 CIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADE------------------ 209
Query: 729 AKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNR----EFD 784
+ GP +V+VP STL NW EF +W P LR I F G ++ + A I++ E+D
Sbjct: 210 ---IPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG---DKDARAAFIRDEMMPGEWD 263
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
V +T++E +IKE+ + K W + +IDE HR+KN +SKLS + + S RL+LTGTPL
Sbjct: 264 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF-KSTNRLLLTGTPL 322
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QNNL ELWALLNF+LP +FNS FD WF+T N G K+ + RLH VL
Sbjct: 323 QNNLHELWALLNFLLPDVFNSADDFDSWFDTK--NCLGDQKL----------VERLHAVL 370
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
+PFLLRR+K DVEK LP K E + +S +Q + Y ++L + + + + S K R
Sbjct: 371 KPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILM-KDIDVLNSSG--KMDKMR 427
Query: 965 GFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRV 1024
N +MQLRK CNHP++F+ E P T++ I ++GK +L+++L K K G RV
Sbjct: 428 -LLNILMQLRKCCNHPYLFDGAEP--GPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRV 484
Query: 1025 LIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRT------------ALLNTFNAPNS 1072
LIF QMT+++DI+ED+ + +Y RLDG T ++R + FNAPNS
Sbjct: 485 LIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNS 544
Query: 1073 DYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITD 1132
F F+LSTRAGGLG+NL +AD VI++D+DWNP DLQA DRAHRIGQK VR+ RLITD
Sbjct: 545 SKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITD 604
Query: 1133 NSVEEAILDKAHAKLDIDGKVIQAGK 1158
N+VEE I+++A KL +D VIQ G+
Sbjct: 605 NTVEERIVERAEIKLRLDSIVIQQGR 630
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 404 bits (1038), Expect = e-112
Identities = 217/507 (42%), Positives = 326/507 (63%), Gaps = 31/507 (6%)
Query: 671 EVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
++ +QP L+GGTL++YQL+GL ++V+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 628 KLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQ 687
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQA------LIKNREFD 784
+ GPFLV+VPLSTL NW EF KW P + I + G R+ + + + +F+
Sbjct: 688 QIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGRPIKFN 747
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
+LTT+E ++K++ +LSKIKW++ ++DE HR+KN++++L L + + +L++TGTPL
Sbjct: 748 ALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTAL-LEFSTKNKLLITGTPL 806
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QN++ ELWALL+F+ P F + F E + ++ + +E E + LH L
Sbjct: 807 QNSVEELWALLHFLDPGKFKNKDEFVENY---------KNLSSFNESE----LANLHLEL 853
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
RP +LRR+ KDVEK LP K+E++L+ +MS LQ + Y+ +L+ F D + +
Sbjct: 854 RPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN----FHDLNKGVRGNQV 909
Query: 965 GFNNQIMQLRKICNHPFVFEEVEDQINPARETN---DTIWRSAGKFELLERILPKFKATG 1021
N +++L+K CNHPF+FE + N D I S+GK +L+++L + + T
Sbjct: 910 SLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETK 969
Query: 1022 HRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLST 1081
HRVLIF QM +++DI+ ++L ++ RLDG TK++ R ++ FNAP SD FCFLLST
Sbjct: 970 HRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLST 1029
Query: 1082 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILD 1141
RAGGLG+NL TADTV+IFD+DWNP DLQA RAHRIGQ+ V I R +T SVEE IL+
Sbjct: 1030 RAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILE 1089
Query: 1142 KAHAKLDIDGKVIQ----AGKFDNKST 1164
+A K+ +D VIQ G+ + + T
Sbjct: 1090 RAKRKMVLDHLVIQKLNAEGRLEKRET 1116
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 401 bits (1030), Expect = e-111
Identities = 218/493 (44%), Positives = 310/493 (62%), Gaps = 30/493 (6%)
Query: 672 VKQQPSILVGG-TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
+K QP L G TL++YQ+ GL W++ + + ILADEMGLGKTIQTI L L++
Sbjct: 515 IKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIH 574
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQAL------IKNREFD 784
++GPFL +VPLST+T W EFD WAP + + + G R+ Q K +F+
Sbjct: 575 HLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKFN 634
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
+LTT+E ++K++ L ++W ++DE HR+KN S L +L + +++RL++TGTPL
Sbjct: 635 CILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEF-DTNHRLLITGTPL 693
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QN+L ELWALL+F++P FD W N + +DK RLH+ L
Sbjct: 694 QNSLKELWALLHFIMPD------KFDTWENFEVQHGNAEDK----------GYTRLHQQL 737
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
P++LRR+KKDVEK LP KVE++L+ +M++LQ + Y+ +L FD K S+
Sbjct: 738 EPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKN----FDALRKGKRGSTS 793
Query: 965 GFNNQIMQLRKICNHPFVFEEVEDQINPAR--ETNDTIWRSAGKFELLERILPKFKATGH 1022
F N +++L+K CNH + E ++ + E T+ + +GK LL+++L + K TGH
Sbjct: 794 TFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGH 853
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
RVLIF QM +++D++ D+L+ + RLDG K + R L+ FNA S FCFLLSTR
Sbjct: 854 RVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTR 913
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
AGGLG+NL TADTVIIFD+DWNP DLQAQ RAHRIGQKN+V I RL+T SVEE I+++
Sbjct: 914 AGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVER 973
Query: 1143 AHAKLDIDGKVIQ 1155
A K+ +D VIQ
Sbjct: 974 AKQKMVLDHLVIQ 986
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 399 bits (1024), Expect = e-110
Identities = 217/493 (44%), Positives = 318/493 (64%), Gaps = 30/493 (6%)
Query: 672 VKQQPSILVGGTL--KEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEA 729
+K+QP+ L G L ++YQL+GL W+ + + + ILADEMGLGKTIQTIS L+YL+
Sbjct: 470 LKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQ 529
Query: 730 KGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQ------ALIKNREF 783
++GPFL++VPLSTLT+W EF+ WAP++ + + G M R + + K +F
Sbjct: 530 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKF 589
Query: 784 DVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTP 843
+ ++TT+E ++K++ +L I W +DE HR+KN S L TL + S++RL++TGTP
Sbjct: 590 NALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDF-KSNHRLLITGTP 648
Query: 844 LQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKV 903
LQN+L ELW+LL+F++P+ F + F+E N + LHKV
Sbjct: 649 LQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENG----------------YQSLHKV 692
Query: 904 LRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSS 963
L PFLLRR+KKDVEK LP KVE++L+ +MSALQ + Y+ +L + + S+
Sbjct: 693 LEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRN----YKALAKGTRGST 748
Query: 964 RGFNNQIMQLRKICNHPFVFEEVED-QINPARETNDTIWRSAGKFELLERILPKFKATGH 1022
GF N +M+L+K CNH ++ + E+ + +E ++ RS+GK LL+++L + + G+
Sbjct: 749 SGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGN 808
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
RVLIF QM +++DI+ ++L + RLDG K + R L+ FNA S+ FCFLLSTR
Sbjct: 809 RVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTR 868
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
AGGLG+NL +ADTV+IFD+DWNP DLQAQ RAHRIGQK +V I RL+T +VEE I+++
Sbjct: 869 AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIER 928
Query: 1143 AHAKLDIDGKVIQ 1155
A K+ +D VIQ
Sbjct: 929 AKKKMVLDHLVIQ 941
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 393 bits (1010), Expect = e-108
Identities = 215/514 (41%), Positives = 321/514 (61%), Gaps = 39/514 (7%)
Query: 670 EEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEA 729
E++ QP + GG L+++QL G+ WM L++ NGILADEMGLGKT+QT++ +++L A
Sbjct: 362 EKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFA 421
Query: 730 KGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMER----------KPKQALIK 779
+ +GP +++VPLST+ W F+KWAP L I + G R P+ K
Sbjct: 422 RRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKK 481
Query: 780 NREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLIL 839
+F+V+LTT+EYI+K+R L IKW +DE HR+KNA+S L +LN++ ++ R+++
Sbjct: 482 TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVAN-RMLI 540
Query: 840 TGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRR 899
TGTPLQNN+ EL AL+NF++P F + D F N +EE I
Sbjct: 541 TGTPLQNNIKELAALVNFLMPGRFTIDQEID------FEN---------QDEEQEEYIHD 585
Query: 900 LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQK 959
LH+ ++PF+LRRLKKDVEK LP K E++L+ ++S +Q + Y+ +L + +
Sbjct: 586 LHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGH 645
Query: 960 FSSSRGFNNQIMQLRKICNHPFVFEEVEDQI----NPARETNDTIWR----SAGKFELLE 1011
FS N + +L+K NHP++F+ E+++ + T + + R S+GK LL+
Sbjct: 646 FS----LLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLD 701
Query: 1012 RILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPN 1071
++L + K GHRVLIF QM +++DI+ D+L + + RLDG S R ++ FN+P+
Sbjct: 702 QLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPD 761
Query: 1072 SDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT 1131
S+ F FLLSTRAGGLG+NL TADTV+IFD+DWNP DLQA RAHRIGQKN V + RL++
Sbjct: 762 SNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVS 821
Query: 1132 DNSVEEAILDKAHAKLDIDGKVIQAGKFD-NKST 1164
++VEE +L++A K+ ++ +I G D NK T
Sbjct: 822 KDTVEEEVLERARKKMILEYAIISLGVTDGNKYT 855
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 392 bits (1008), Expect = e-108
Identities = 218/494 (44%), Positives = 315/494 (63%), Gaps = 31/494 (6%)
Query: 672 VKQQPSILVGGT---LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYE 728
+K+QPS + G L++YQL GL W+ + + ILADEMGLGKTIQTIS L YL+
Sbjct: 466 LKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH 525
Query: 729 AKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQA------LIKNRE 782
++GPFL++VPLSTLT+W E WA ++ + + G R + K +
Sbjct: 526 EHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLK 585
Query: 783 FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGT 842
F+++LTT+E ++K++ L + W +DE HR+KN S L TL + S++RL++TGT
Sbjct: 586 FNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDF-KSNHRLLITGT 644
Query: 843 PLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHK 902
PLQN+L ELW+LL+F++P+ F+S + F+E + G++ S LHK
Sbjct: 645 PLQNSLKELWSLLHFIMPEKFSSWEDFEE------EHGKGREYGYAS----------LHK 688
Query: 903 VLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSS 962
L PFLLRR+KKDVEK LP KVE++L+ +MSALQ + Y+ +L + S S
Sbjct: 689 ELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRN----YKALSKGSKGS 744
Query: 963 SRGFNNQIMQLRKICNHPFVFEEVED-QINPARETNDTIWRSAGKFELLERILPKFKATG 1021
+ GF N +M+L+K CNH ++ + ++ + +E + RS+GK LL+++L + + G
Sbjct: 745 TSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERG 804
Query: 1022 HRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLST 1081
+RVLIF QM +++DI+ ++L+Y + RLDG K + R L+ FNA S+ FCFLLST
Sbjct: 805 NRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLST 864
Query: 1082 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILD 1141
RAGGLG+NL +ADTV+IFD+DWNP DLQAQ RAHRIGQK +V I RL+T SVEE IL+
Sbjct: 865 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 924
Query: 1142 KAHAKLDIDGKVIQ 1155
+A K+ +D VIQ
Sbjct: 925 RAKKKMVLDHLVIQ 938
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 386 bits (992), Expect = e-106
Identities = 232/643 (36%), Positives = 371/643 (57%), Gaps = 58/643 (9%)
Query: 539 RIDKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTR 598
++D ++V L R I +E+++ ++ +++ + + + I D
Sbjct: 244 KVDNHIKQVILLDREIREDPTTTREDIEAMDIEKERKRENYEEYKQVDRIVAKHLNSDGS 303
Query: 599 ITHLLKQTNTFLDSLT-KAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERE 657
+ +L+K D T +A + +I++ QE E + G + + +
Sbjct: 304 VEYLVKWKQLLYDFCTWEASSIIEPIAATEIQAF---QEREESALSPSRGTNYGNSRPKY 360
Query: 658 RIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTI 717
R +++QQPS + GG L+++QL G+ WM L++ + NGILADEMGLGKT+
Sbjct: 361 R------------KLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTV 408
Query: 718 QTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQAL 777
QT++ L+YL + HGPFLV+VPLST+ W WA + I++ G R+ +
Sbjct: 409 QTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQ----V 464
Query: 778 IKNREF----------DVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTL 827
I++ EF +++LTT+EY++K+R +LS IKW + IDE HR+KN++S L L
Sbjct: 465 IRDYEFYVDGTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEAL 524
Query: 828 NTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIA 887
+ + +S+ RL++TGTPLQNN+ EL AL++F++P F + + +
Sbjct: 525 SQFKNSN-RLLITGTPLQNNIRELAALVDFLMPGKFEIREEIN---------------LE 568
Query: 888 LSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQML-KH 946
+EE IR L + L+P++LRRLKKDVEK LP K E++L+ ++S LQ Y+ +L ++
Sbjct: 569 APDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRN 628
Query: 947 RRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVED----QINPARETNDTIW- 1001
R+ SS + S N +++L+K NHP++F+ VE+ +IN ++ +
Sbjct: 629 YRVLTQSISSGSQIS----LLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKG 684
Query: 1002 --RSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDD 1059
++GK LL+++L + + GHRVLIF QM +++DI+ D+L + RLDG +
Sbjct: 685 LIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAV 744
Query: 1060 RTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG 1119
R ++ FNAPNS F FLLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIG
Sbjct: 745 RRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 804
Query: 1120 QKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNK 1162
QKN V + RL++ +++EE +L++A K+ ++ +I G D +
Sbjct: 805 QKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQ 847
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 385 bits (988), Expect = e-106
Identities = 219/511 (42%), Positives = 311/511 (60%), Gaps = 31/511 (6%)
Query: 660 DYYEVAHSIKEEVKQQPSI----LVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGK 715
+Y EV +E V+ I V L++YQ++GL W++++ N +N ILADEMGLGK
Sbjct: 25 NYGEVVEGDEEPVEPYTFISSPRFVLYELRDYQIEGLNWLINMHENSINCILADEMGLGK 84
Query: 716 TIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQ 775
T+QTI+ L Y+ K L+I+P STL NW EF K+ P + F E + +
Sbjct: 85 TLQTIAFLGYIRYVKKERKRHLIILPKSTLANWRREFRKFMPNYKVRVFYSSRKEMRREA 144
Query: 776 ALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDY 835
I + +D LTT+E I R +L+ +KW + +IDE HR+KN S LS + + D+
Sbjct: 145 EEIMSSRWDACLTTYEMCINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVRIF-SCDH 203
Query: 836 RLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLL 895
RL++TGTPLQNN+ ELWALLNF++P+IFN + F+ + + +E
Sbjct: 204 RLLITGTPLQNNVHELWALLNFIVPEIFNDAEKFESY-------------VMNIDEGDGE 250
Query: 896 VIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDS 955
IRR+ VL+ F LRR K DVE LP K L K+S +Q + Y+ +LK D S
Sbjct: 251 AIRRIRSVLQLFFLRREKIDVEMSLPPKKIVNLYSKLSPMQREWYRMLLKR------DLS 304
Query: 956 SNQKFSSSRGF-NNQIMQLRKICNHPFVFEEVEDQINPARETNDT-IWRSAGKFELLERI 1013
+G N +MQLRK CNHP++F + E P TND I ++GK +L+++
Sbjct: 305 PLGSTRDPKGMLMNVVMQLRKCCNHPYLFPDAE----PKPYTNDKHIIENSGKMIVLDKL 360
Query: 1014 LPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSD 1073
L KA G RVLIF QM+ ++DI+ED+ + + +Y R+DG T DRT ++ FNA S+
Sbjct: 361 LASLKAKGSRVLIFSQMSMMLDILEDYAMFREYEYCRIDGSTSYRDRTEAIDGFNAEGSE 420
Query: 1074 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDN 1133
F FLL+TRAGGLG+NL TADTVI+FD+DWNP DLQAQDRAHRIGQK +V + RLI++N
Sbjct: 421 KFLFLLTTRAGGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISEN 480
Query: 1134 SVEEAILDKAHAKLDIDGKVIQAGKFDNKST 1164
+VEE I+ ++ KL +D ++Q G++ S+
Sbjct: 481 TVEERIVYRSLQKLKLDDILLQ-GRYHRSSS 510
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 384 bits (986), Expect = e-106
Identities = 238/623 (38%), Positives = 347/623 (55%), Gaps = 41/623 (6%)
Query: 569 ERNAKQRLQALKANDEE--------AYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQ 620
E A++ Q LK ++E A L++T+ T++ LL QT + + L + ++D
Sbjct: 65 EAMAQEEEQLLKLREDEEKANNAGSAVAPNLNETQFTKLDELLTQTQLYSEFLLEKMED- 123
Query: 621 QSFTKDKIESHLDTQELSEDNVGDKNGADSDDD-----------LERERIDYYEVAHSIK 669
T + IES E + G K A S + + R + D + +
Sbjct: 124 --ITINGIESESQKAEPEKTGRGRKRKAASQYNNTKAKRAVAAMISRSKEDGETINSDLT 181
Query: 670 EE---VKQQPSI---LVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLL 723
EE +K Q + L GG LK YQLKG++W++SL+ N LNGILAD+MGLGKTIQTI L
Sbjct: 182 EEETVIKLQNELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL 241
Query: 724 TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMER----KPKQALIK 779
++L + G+ GP+LVI PLSTL+NW E ++ P + I + G +R +
Sbjct: 242 SHL-KGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTV 300
Query: 780 NREFDVVLTTFEYIIKE-RPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLI 838
+F +V+T++E + + + +L W + +IDEGHR+KN + KL L + D +L+
Sbjct: 301 GPKFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELK-HLKMDNKLL 359
Query: 839 LTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIR 898
LTGTPLQNNL ELW+LLNF+LP IF S F+ WF+ N K E+ V+
Sbjct: 360 LTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEE-EEKRRAQVVS 418
Query: 899 RLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQ 958
+LH +LRPF+LRR+K DVE LP K E ++ M+ Q K + ++ + +++ +
Sbjct: 419 KLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIR 478
Query: 959 KFSSSRGFNNQIMQLRKICNHPFVFEEVED--QINPARETNDTIWRSAGKFELLERILPK 1016
NN ++QLRK CNHP + + D + P E I GKF LLER+L +
Sbjct: 479 GQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEE---IVGQCGKFRLLERLLVR 535
Query: 1017 FKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFC 1076
A H+VLIF Q T+++DIM+ + + R+DG K D+R + F+ S
Sbjct: 536 LFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSI 595
Query: 1077 FLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVE 1136
FLLSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T S+E
Sbjct: 596 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIE 655
Query: 1137 EAILDKAHAKLDIDGKVIQAGKF 1159
+L +A++KL ++ VI G+F
Sbjct: 656 TRVLKRAYSKLKLEHVVIGQGQF 678
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 383 bits (983), Expect = e-105
Identities = 210/478 (43%), Positives = 299/478 (61%), Gaps = 27/478 (5%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L++YQL+GL WMV + + ILADEMGLGKTIQ+ISLL L+ + GP+LV+VPLS
Sbjct: 405 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 464
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQAL------IKNREFDVVLTTFEYIIKER 797
T+ W EF +WAP++ + + G + R + K + + +LTT+E ++K++
Sbjct: 465 TMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVGGTKKMKINAILTTYEILLKDK 524
Query: 798 PLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNF 857
LS I W ++DE HR+KN +S L +L T + +++L++TGTPLQN+L ELWALL+F
Sbjct: 525 AFLSSIDWAALLVDEAHRLKNDESLLYKSL-TQFRFNHKLLITGTPLQNSLKELWALLHF 583
Query: 858 VLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVE 917
++P+ F+ + F+ N +N G I LHK L PFLLRR+KKDVE
Sbjct: 584 IMPEKFDCWEEFETAHNE--SNHKG--------------ISALHKKLEPFLLRRVKKDVE 627
Query: 918 KDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKIC 977
K LP K E++L+ M+A Q + Y+ +L + + S S GF N +M+L+K C
Sbjct: 628 KSLPPKTEQILRVDMTAHQKQFYKWILTKN----YRELSKGVKGSINGFVNLVMELKKCC 683
Query: 978 NHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIM 1037
NH + + + + A+ + +S+GK LL+++L + K GHRVLIF QM ++DI+
Sbjct: 684 NHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMMLDIL 743
Query: 1038 EDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVI 1097
+++L+ RLDG ++D R L+ +NAP S F FLLSTRAGGLG+NL TADTVI
Sbjct: 744 QEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRAGGLGINLATADTVI 803
Query: 1098 IFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQ 1155
IFD+DWNP DLQA RAHRIGQ V I RL+T SVEE I+++A KL +D VIQ
Sbjct: 804 IFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERAKRKLVLDHLVIQ 861
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 379 bits (973), Expect = e-104
Identities = 221/524 (42%), Positives = 304/524 (57%), Gaps = 63/524 (12%)
Query: 667 SIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYL 726
++K E + + GGTL YQL+GL W+ + + ILADEMGLGKTIQTI L L
Sbjct: 719 TVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSL 778
Query: 727 YEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFD-- 784
Y+ GPFLV PLST+ NW EF WAPK + + G K +A+I+ EF
Sbjct: 779 YKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGD----KDSRAIIRENEFSFE 834
Query: 785 ----------------------VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSK 822
V+LT++E I ++ L I+W ++DE HR+KN QSK
Sbjct: 835 DNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSK 894
Query: 823 LSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGG 882
LN Y D++L+LTGTPLQNNL EL+ LLNF+ P+ FN+++ F E FA+
Sbjct: 895 FFRVLNGY-KIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLE----EFADISK 949
Query: 883 QDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQ 942
+D+I ++LH +L P +LRRLK DV K++P K E +++ ++S +Q K Y+
Sbjct: 950 EDQI-----------KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKY 998
Query: 943 MLKHRRLFIFDDSSNQKFSSSRGFNNQI------MQLRKICNHPFVFEEV---EDQINPA 993
+L + N + +SRG NQ+ M L+K CNHP++F ++
Sbjct: 999 IL----------TRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSG 1048
Query: 994 RETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDG 1053
+ +S+GK LL+++L K K GHRVLIF QMT+++D++EDFL Y KY R+DG
Sbjct: 1049 AYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDG 1108
Query: 1054 HTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 1113
R ++ FNAP + FCFLLSTRAGGLG+NL TADTVIIFD+DWNPH D+QA
Sbjct: 1109 GITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFS 1168
Query: 1114 RAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
RAHRIGQ N+V I R +T SVEE I A K+ + V++ G
Sbjct: 1169 RAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPG 1212
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 377 bits (969), Expect = e-104
Identities = 234/691 (33%), Positives = 361/691 (51%), Gaps = 89/691 (12%)
Query: 529 LDRCKSIHDLRIDKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYI 588
L+ K L K++ +VK G I+ + EK +++ + + +E +
Sbjct: 91 LEEQKKKEKLERKKESLKVKKGKNSID--ASEEKPVMRKKRGREDESYNISEVMSKEEIL 148
Query: 589 KLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKI-ESHLDTQELSEDNVGDKNG 647
+ + K TN ++ L K KD S KD++ E+ + D V NG
Sbjct: 149 SVAKKNKKENEDENSSSTNLCVEDLQKN-KDSNSIIKDRLSETVRQNTKFFFDPVRKCNG 207
Query: 648 ADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGIL 707
+ + + QQP GG ++ YQ++G++W+ L+ N +NGIL
Sbjct: 208 ---------QPVPF------------QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGIL 246
Query: 708 ADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGP 767
ADEMGLGKT+Q I+ + + + +GV GPFLV PLSTL NW AEF ++ P + + + G
Sbjct: 247 ADEMGLGKTVQCIATIALMIQ-RGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGT 305
Query: 768 PMERKPKQALIKNRE-----FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSK 822
ER+ I R+ VV+T+FE +++R L W + I+DEGHR+KN + +
Sbjct: 306 QEERQKLVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCR 365
Query: 823 LSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGG 882
L L + ++D +L+LTGTPLQNNL ELW+LLNF+LP +F+ +KSF+ WF+ +
Sbjct: 366 LIRELKRF-NADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETA 424
Query: 883 QDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQ 942
+D IA E+ V+ LH++L PFLLRRLK DV ++P K E V+ +S Q Y
Sbjct: 425 EDIIAKEREQN--VLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTA 482
Query: 943 MLKHRRLFIFDDSSNQ------------------KFSSSRGFNNQI-------------- 970
++ +F S + +S F N++
Sbjct: 483 IVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRE 542
Query: 971 ----------------------MQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFE 1008
M LRK CNHP++ E D + + ++ + ++GKF
Sbjct: 543 RAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFL 602
Query: 1009 LLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFN 1068
+L+R+LP+ K GH+VL+F QMT ++DI+ D+ D + RLDG +R +++FN
Sbjct: 603 ILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFN 662
Query: 1069 APNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILR 1128
+ + F FL+STRAGGLG+NL ADTVII+D+DWNP DLQAQDR HRIGQ V + R
Sbjct: 663 T-DPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYR 721
Query: 1129 LITDNSVEEAILDKAHAKLDIDGKVIQAGKF 1159
L+T N++++ I+++A AK ++ +I F
Sbjct: 722 LVTANTIDQKIVERAAAKRKLEKLIIHKNHF 752
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 375 bits (963), Expect = e-103
Identities = 222/546 (40%), Positives = 315/546 (57%), Gaps = 63/546 (11%)
Query: 645 KNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLN 704
K G DD + + D V ++K + + GGTL YQL+GL W+ + +
Sbjct: 661 KKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD 720
Query: 705 GILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAF 764
ILADEMGLGKT+QTI L LY+ GP+LV PLST+ NW EF+ WAP + +
Sbjct: 721 TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY 780
Query: 765 KGPPMERKPKQALIKNREFD------------------------VVLTTFEYIIKERPLL 800
G K +++I+ EF V+LT++E I ++ +L
Sbjct: 781 TGD----KESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAIL 836
Query: 801 SKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLP 860
I+W ++DE HR+KN QSK LN+Y DY+L+LTGTPLQNNL EL+ LLNF+ P
Sbjct: 837 GSIEWACLVVDEAHRLKNNQSKFFRVLNSY-KIDYKLLLTGTPLQNNLEELFHLLNFLTP 895
Query: 861 KIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDL 920
+ FN+++ F E FA+ +D+I ++LH +L P +LRRLK DV K++
Sbjct: 896 ERFNNLEGFLE----EFADISKEDQI-----------KKLHDLLGPHMLRRLKADVFKNM 940
Query: 921 PDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQI------MQLR 974
P K E +++ ++S +Q K Y+ +L + N + +S+G NQ+ M L+
Sbjct: 941 PAKTELIVRVELSQMQKKYYKFIL----------TRNFEALNSKGGGNQVSLLNIMMDLK 990
Query: 975 KICNHPFVFE--EVEDQINP-ARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMT 1031
K CNHP++F VE + P ++ +S+GK LL+++L K + GHRVLIF QMT
Sbjct: 991 KCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMT 1050
Query: 1032 QVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQ 1091
+++D++EDFL Y KY R+DG R ++ FNAP + FCFLLSTRAGGLG+NL
Sbjct: 1051 KMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLA 1110
Query: 1092 TADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDG 1151
TADTVII+D+DWNPH D+QA RAHRIGQ +V I R +T SVEE I A K+ +
Sbjct: 1111 TADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTH 1170
Query: 1152 KVIQAG 1157
V++ G
Sbjct: 1171 LVVRPG 1176
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 373 bits (957), Expect = e-102
Identities = 209/501 (41%), Positives = 313/501 (61%), Gaps = 35/501 (6%)
Query: 671 EVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
++++QPS + GG ++++QL G+ WM L++ + NGILADEMGLGKT+QT+ L+YL +
Sbjct: 377 KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL 436
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQAL-------IKNREF 783
HGPFL++VPLST+ W W P L I + G R + + +F
Sbjct: 437 KQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKF 496
Query: 784 DVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTP 843
+++LTT+EYI+K++ L+ I+W + IDE HR+KN++S L TL+ + ++ RL++TGTP
Sbjct: 497 NILLTTYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTAN-RLLITGTP 555
Query: 844 LQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKV 903
LQNNL EL +L+NF++P F + F+ P A E+E IR L +
Sbjct: 556 LQNNLKELASLVNFLMPGKFYIRDELN--FDQPNA-----------EQER--DIRDLQER 600
Query: 904 LRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQML--KHRRLFIFDDSSNQKFS 961
L+PF+LRRLKKDVEK LP K E++L+ ++S +Q + Y+ +L +R L D Q
Sbjct: 601 LQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQL-- 658
Query: 962 SSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETN--DT---IWRSAGKFELLERILPK 1016
N +++L+K+ NHP++F ++ R+ DT I ++GK LL+++L +
Sbjct: 659 ---SLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQR 715
Query: 1017 FKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFC 1076
K GHRVLIF QM ++++I+ +++ Y RLDG + R ++ FNAP+S F
Sbjct: 716 LKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFV 775
Query: 1077 FLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVE 1136
FLLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQKN V + R ++ ++VE
Sbjct: 776 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 835
Query: 1137 EAILDKAHAKLDIDGKVIQAG 1157
E IL++A K+ ++ +I G
Sbjct: 836 EDILERARRKMILEYAIISLG 856
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 372 bits (955), Expect = e-102
Identities = 234/625 (37%), Positives = 360/625 (57%), Gaps = 63/625 (10%)
Query: 564 ELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSF 623
EL I++ + +++ K +YI + +D ++ + +D +T+ D Q F
Sbjct: 1069 ELLEIDKRVEAKIKRFKVKKMSSYI---EDDEDFNSDFVI--VDRVVDLITE--DDGQEF 1121
Query: 624 TKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIK---EEVKQQPSILV 680
K +S L +E++ + + + ER+ ID ++ + EE K+ + V
Sbjct: 1122 VLIKWKS-LGYEEVTWEPIEMIPADKVELWRERQVIDPAKIREKQRPEPEEWKKMSTSKV 1180
Query: 681 ---GGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFL 737
G +L+EYQ +G+ W++ + N N ILADEMGLGKT+QTI+ L+ +Y+ G+HGPFL
Sbjct: 1181 WKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDY-GIHGPFL 1239
Query: 738 VIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQAL----------IKNRE----- 782
V+VPLST+ NW EF+ W + I + G R+ Q KN +
Sbjct: 1240 VVVPLSTIQNWVREFETWTD-MNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVK 1298
Query: 783 FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGT 842
D ++TTFE ++ + L KI W +IDE HR+KN KL + + ++R++LTGT
Sbjct: 1299 IDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGT 1358
Query: 843 PLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHK 902
PLQNN+ EL++LLNF+ P+ F++ +F E F + T Q +++L +
Sbjct: 1359 PLQNNIDELFSLLNFLHPQQFDNSATFLEQFGS--CQTDDQ-------------VQKLQE 1403
Query: 903 VLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSS 962
+L+P +LRRLK+DVEK L K E +++ ++S +Q K Y+ +L+ + S K +S
Sbjct: 1404 ILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILER------NFSHLCKGTS 1457
Query: 963 SRGFNNQIMQLRKICNHPFVFEEVEDQI-NPAR--------ET--NDTIWRSAGKFELLE 1011
+ N +M+LRK CNHPF+ E+ I N R ET + + +++GK L+E
Sbjct: 1458 APSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIE 1517
Query: 1012 RILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPN 1071
++LPK + GH+VLIF QM +V+D++E+FL + + R+DG+ + D R A ++ F+ N
Sbjct: 1518 KLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKEN 1577
Query: 1072 SDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT 1131
SD F FLL TRAGGLG+NL ADTVIIFD+DWNP DLQAQ R HRIGQK V++ RLIT
Sbjct: 1578 SDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLIT 1637
Query: 1132 DNSVEEAILDKAHAKLDIDGKVIQA 1156
N+ E + DKA KL +D V+Q+
Sbjct: 1638 SNTYEREMFDKASLKLGLDKAVLQS 1662
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 372 bits (955), Expect = e-102
Identities = 220/547 (40%), Positives = 317/547 (57%), Gaps = 49/547 (8%)
Query: 641 NVGDKNGADSDDDLERERIDYYEVAHSIK--EEVKQQPSILVGGTLKEYQLKGLQWMVSL 698
+V + D D +R D+ + H+ + ++V + G L YQL+GL ++
Sbjct: 228 DVNSRTRRSKDVDHKRNPRDFQQFDHTPEFLKDVMIYLFPAIEGLLHPYQLEGLNFLRFS 287
Query: 699 FNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPK 758
++ + ILADEMGLGKTIQ+I+LL L+E + P LVI PLSTL NW EF WAP+
Sbjct: 288 WSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNWEREFATWAPQ 345
Query: 759 LRKIAFKGPPMER------------------KPKQALI------KNREFDVVLTTFEYII 794
+ + + G R K K I K +FDV+LT++E I
Sbjct: 346 MNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMIN 405
Query: 795 KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWAL 854
+ +L IKW I+DEGHR+KN SKL +L T Y S++R++LTGTPLQNNL EL+ L
Sbjct: 406 LDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSL-TQYSSNHRILLTGTPLQNNLDELFML 464
Query: 855 LNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKK 914
++F+ F S++ F E F +++EE I RLHK+L P LLRR+KK
Sbjct: 465 MHFLDAGKFGSLEEFQEEFKD------------INQEEQ---ISRLHKMLAPHLLRRVKK 509
Query: 915 DVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLR 974
DV KD+P K E +L+ +S+LQ + Y+ + + +K + NN +M+LR
Sbjct: 510 DVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVL-----TKKGGAQISLNNIMMELR 564
Query: 975 KICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVM 1034
K+C HP++ E VE I+ A E + S GK +LL++++ K K GHRVLI+ Q ++
Sbjct: 565 KVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHML 624
Query: 1035 DIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTAD 1094
D++ED+ + +Y R+DG +R ++ FNA NS+ FCFLLSTRAGGLG+NL TAD
Sbjct: 625 DLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATAD 684
Query: 1095 TVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
TVII+D+DWNPH DLQA RAHR+GQ N+V I RLI ++EE ++ K+ ++ V+
Sbjct: 685 TVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV 744
Query: 1155 QAGKFDN 1161
K N
Sbjct: 745 GKLKTQN 751
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 370 bits (950), Expect = e-102
Identities = 214/536 (39%), Positives = 315/536 (57%), Gaps = 56/536 (10%)
Query: 649 DSDDDLERERIDYYEVAHSIKEEVKQQPSILV--GGTLKEYQLKGLQWMVSLFNNHLNGI 706
D +RE+ID I+++ + QP + GG L YQL+GL W+ ++N + I
Sbjct: 572 DEKKKKKREKID-------IRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAI 624
Query: 707 LADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKG 766
LADEMGLGKT+Q+++ L L + GPFL+ PLST+ NW E ++W P + + G
Sbjct: 625 LADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVG 684
Query: 767 -----------------PPMERKPKQALIK---NREFDVVLTTFEYIIKERPLLSKIKWV 806
+ PK + +K N +F V+LT++E I ++ +LS I+W
Sbjct: 685 LRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWG 744
Query: 807 HTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSV 866
++DE HR+KN QS LN Y YR++LTGTPLQNNL EL+ LLNF+ + FN +
Sbjct: 745 ALVVDEAHRLKNNQSLFFKNLNEYT-IHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQL 803
Query: 867 KSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEK 926
++F FN +S+E+ I +LH +L P +LRRLK DV +P K E
Sbjct: 804 EAFTAEFNE------------ISKEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKSEL 848
Query: 927 VLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEV 986
+++ ++SA+Q K Y+ +L FD + + + N +M+L+K CNHP++F V
Sbjct: 849 IVRVELSAMQKKWYKNILTRN----FDALNVKNGGTQMSLMNVLMELKKCCNHPYLF--V 902
Query: 987 EDQINPARETND-----TIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFL 1041
+ ++ +E N + +++GKF LL+++L K K GHRVLIF QMT+++DIMED
Sbjct: 903 KAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLC 962
Query: 1042 RYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDT 1101
Y +Y R+DG R ++ +NAP + F FLLSTRAGGLG+NL TADTVII+D+
Sbjct: 963 EYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDS 1022
Query: 1102 DWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
DWNPH D+QA RAHR+GQK++V I R +T SVEE I A K+ ++ V++AG
Sbjct: 1023 DWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAG 1078
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 370 bits (949), Expect = e-101
Identities = 218/575 (37%), Positives = 322/575 (55%), Gaps = 55/575 (9%)
Query: 611 DSLTKAVKDQQSFTKDKIESHLD---TQELSEDNVGDKNGADSDDDLERERIDYYEVAHS 667
D++ K ++ D++ ++ ++ +G K + +RE+ID
Sbjct: 545 DAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEVTSRRKKREKID------- 597
Query: 668 IKEEVKQQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 725
I ++ + QP + GG L YQL+G+ W+ ++N + ILADEMGLGKT+Q+++ L
Sbjct: 598 ILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYT 657
Query: 726 LYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERK------------- 772
L + GPFL+ PLST+ NW E + W P + + G R
Sbjct: 658 LMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGA 717
Query: 773 ----PKQALIK---NREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSL 825
PK + IK N +F V+LT++E I ++ +LS I W ++DE HR+KN QS
Sbjct: 718 VRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFK 777
Query: 826 TLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDK 885
L Y + YR++LTGTPLQNNL EL+ LLNF+ P FN ++SF F+
Sbjct: 778 NLREY-NIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE---------- 826
Query: 886 IALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLK 945
+S+E+ I +LH +L P +LRRLK DV +P K E +++ ++SA+Q K Y+ +L
Sbjct: 827 --ISKEDQ---IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILT 881
Query: 946 HRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEV---EDQINPARETNDTIWR 1002
FD + + + N IM+L+K CNHP++F + ++ + +
Sbjct: 882 RN----FDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIK 937
Query: 1003 SAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTA 1062
+AGKF LL+++L K K GHRVLIF QMT ++DI+EDF KY R+DG R
Sbjct: 938 NAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQD 997
Query: 1063 LLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 1122
++ +NAP + F FLLSTRAGGLG+NL TADTVII+D+DWNPH D+QA RAHR+GQK+
Sbjct: 998 AIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1057
Query: 1123 EVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
+V I R +T SVEE I A K+ + V++AG
Sbjct: 1058 KVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAG 1092
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 364 bits (934), Expect = e-100
Identities = 214/497 (43%), Positives = 301/497 (60%), Gaps = 47/497 (9%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L+EYQL+G+ W++ + N N ILADEMGLGKTIQ+I+ L +Y G+HGPFLVI PLS
Sbjct: 183 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNV-GIHGPFLVIAPLS 241
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQA-----------LIKNR-EFDVVLTTFE 791
T+TNW EF+ W ++ I + G R+ Q LI +FD ++TTFE
Sbjct: 242 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 300
Query: 792 YIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSD--YRLILTGTPLQNNLP 849
I+ + P L +I+W IIDE HR+KN KL L++ H D ++++LTGTPLQN +
Sbjct: 301 MILSDCPELREIEWRCVIIDEAHRLKNRNCKL---LDSLKHMDLEHKVLLTGTPLQNTVE 357
Query: 850 ELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLL 909
EL++LL+F+ P F S F + F L EE +++L +L+P +L
Sbjct: 358 ELFSLLHFLEPSQFPSESEFLKDFGD------------LKTEEQ---VQKLQAILKPMML 402
Query: 910 RRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQ 969
RRLK+DVEK+L K E +++ +++ +Q K Y+ +L+ F+ S ++ N
Sbjct: 403 RRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL---SKGAGHTNMPNLLNT 459
Query: 970 IMQLRKICNHPFVFEEVEDQI-NPARETNDTI---------WRSAGKFELLERILPKFKA 1019
+M+LRK CNHP++ E++I RE I RSAGK L++++LPK KA
Sbjct: 460 MMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 519
Query: 1020 TGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLL 1079
GH+VLIF QM + +DI+ED+L Y R+DG + + R A ++ F+ P+SD F FLL
Sbjct: 520 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 579
Query: 1080 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAI 1139
TRAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIGQ V++ RLIT NS E +
Sbjct: 580 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 639
Query: 1140 LDKAHAKLDIDGKVIQA 1156
DKA KL +D V+Q+
Sbjct: 640 FDKASLKLGLDKAVLQS 656
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 363 bits (933), Expect = e-100
Identities = 215/521 (41%), Positives = 302/521 (57%), Gaps = 67/521 (12%)
Query: 673 KQQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
++QP L GGTL YQ++GL W+ + + ILADEMGLGKT+QT L LY+
Sbjct: 713 ERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG 772
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFD------ 784
GPFLV PLST+ NW EF+ WAP + + + G K +A+I+ EF
Sbjct: 773 HSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGD----KDSRAIIRENEFSFEDNAI 828
Query: 785 ------------------VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLT 826
V+LT++E I + +L I W I+DE HR+KN QSK
Sbjct: 829 RGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRV 888
Query: 827 LNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI 886
LN Y ++L+LTGTPLQNNL EL+ LLNF+ P+ F++++ F E FA+ +D+
Sbjct: 889 LNG-YSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLE----EFADIAKEDQ- 942
Query: 887 ALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKH 946
I++LH +L P +LRRLK DV K++P K E +++ ++S +Q K Y+ +L
Sbjct: 943 ----------IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYIL-- 990
Query: 947 RRLFIFDDSSNQKFSSSRGFNNQ------IMQLRKICNHPFVFE----EVEDQINPARET 996
+ N + ++RG NQ +M L+K CNHP++F E N +
Sbjct: 991 --------TRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDG 1042
Query: 997 NDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTK 1056
+ I R++GK LL+++L K GHRVLIF QMT+++D++EDFL + KY R+DG
Sbjct: 1043 SALI-RASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGIT 1101
Query: 1057 SDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAH 1116
+ R ++ FNAP + FCFLLSTRAGGLG+NL TADTVII+D+DWNPH D+QA RAH
Sbjct: 1102 GNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1161
Query: 1117 RIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
RIGQ +V I R +T SVEE I A K+ + V++ G
Sbjct: 1162 RIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPG 1202
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 361 bits (927), Expect = 4e-99
Identities = 209/495 (42%), Positives = 300/495 (60%), Gaps = 43/495 (8%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L+EYQL+G+ W++ + N N ILADEMGLGKTIQ+I+ L +Y KG+HGPFLVI PLS
Sbjct: 399 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIY-LKGIHGPFLVIAPLS 457
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPPMERK-----------PKQALIKNR-EFDVVLTTFE 791
T+ NW EF W +L + + G R+ P+ +IK +F ++TTFE
Sbjct: 458 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 516
Query: 792 YIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPEL 851
I+ + P L I W +IDE HR+KN KL L +++++LTGTPLQN + EL
Sbjct: 517 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTVEEL 575
Query: 852 WALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRR 911
++LL+F+ P F S +F + F L EE +++L +L+P +LRR
Sbjct: 576 FSLLHFLEPSRFPSETTFMQEFGD------------LKTEEQ---VQKLQAILKPMMLRR 620
Query: 912 LKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIM 971
LK+DVEK+L K E +++ +++ +Q K Y+ +L+ F+ S ++ N +M
Sbjct: 621 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFL---SKGGGQANVPNLLNTMM 677
Query: 972 QLRKICNHPFVFEEVEDQI-NPARETNDT---------IWRSAGKFELLERILPKFKATG 1021
+LRK CNHP++ E++I +ET++ + ++AGK L++++LPK KA G
Sbjct: 678 ELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGG 737
Query: 1022 HRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLST 1081
HRVLIF QM + +DI+ED+L Y R+DG + + R A ++ F+ P+SD F FLL T
Sbjct: 738 HRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 797
Query: 1082 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILD 1141
RAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIGQ V+I RLIT NS E + D
Sbjct: 798 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFD 857
Query: 1142 KAHAKLDIDGKVIQA 1156
KA KL +D V+Q+
Sbjct: 858 KASLKLGLDKAVLQS 872
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 360 bits (925), Expect = 7e-99
Identities = 235/687 (34%), Positives = 362/687 (52%), Gaps = 100/687 (14%)
Query: 558 TNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAV 617
++ E + + +++ AK K+ D+E L + ++ LK+ N F V
Sbjct: 90 SDTEAVQAQVVDKLAKDTKSEQKSLDDE-----LSEMDTKTVSLKLKKLNEF-------V 137
Query: 618 KDQQSFTKDKIESHLD-TQELSEDNVGDKNGADSDDDLERER-------IDYYEVAHSIK 669
+ Q ++ ++ L + E++ N D + +D ++ ++R D+++ +
Sbjct: 138 RQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNE 197
Query: 670 EEVKQ----------QPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQT 719
+ Q QP +L LK YQL+GL W+++L+ N LNGILADEMGLGKT+Q+
Sbjct: 198 DTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQS 257
Query: 720 ISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIK 779
I+LL ++YE GPFLV PLSTL NW EF K+AP L + + G K + A +K
Sbjct: 258 IALLAFIYE-MDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYG-TNGYKERSAKLK 315
Query: 780 N-----REFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSD 834
N +V+T++E I+++ L+ W I+DEGHR+KN +L L S+
Sbjct: 316 NFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSN 375
Query: 835 YRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG-GQDKIAL----S 889
RL+LTGTPLQNNL ELW+LLNF++P IF + F++WF+ N G G + AL +
Sbjct: 376 -RLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLIN 434
Query: 890 EEETLLVIRRLHKVLRPFLLRRLKKDVEKD-LPDKVEKVLKCKMSALQHKLYQ------- 941
+E +I LH +L+PFLLRRLKK V + LP K E ++ C M++ Q K Y+
Sbjct: 435 DELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKL 494
Query: 942 -----------------QMLKHRRLFIFDDSSNQKFSSSRGFN----------------- 967
+ + H D N K S + N
Sbjct: 495 KKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYK 554
Query: 968 -------------NQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERIL 1014
N +MQLR+I + F+F ++P T +T+ +++GK ++L++++
Sbjct: 555 KNLQMEISNKKLQNMMMQLRQIIDSTFLF--YFPYLHPEDLTLETLLKTSGKLQILQKLI 612
Query: 1015 PKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDY 1074
P + GH+VLI+ Q ++D++ED+ R+DG ++ R L FN+ +
Sbjct: 613 PPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKH 672
Query: 1075 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNS 1134
FLLSTRA GLG+NL ADTV++FD+DWNP DLQA DR HRIGQ++ V + RL DN+
Sbjct: 673 NIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNT 732
Query: 1135 VEEAILDKAHAKLDIDGKVIQAGKFDN 1161
+E IL +A K +++ VIQ GKF+N
Sbjct: 733 IEHVILTRAANKRNLERMVIQMGKFNN 759
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 360 bits (924), Expect = 1e-98
Identities = 208/494 (42%), Positives = 298/494 (60%), Gaps = 43/494 (8%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L+EYQL+G+ W++ + N N ILADEMGLGKTIQ+I+ L+ ++ +G+HGPFL+I PLS
Sbjct: 459 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIF-LRGIHGPFLIIAPLS 517
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQA------------LIKNREFDVVLTTFE 791
T+TNW EF W ++ I + G + R+ Q L +F VV+TTFE
Sbjct: 518 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 576
Query: 792 YIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPEL 851
I+ + P L KI W IIDE HR+KN KL L +++++LTGTPLQN++ EL
Sbjct: 577 MILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA-LEHKVLLTGTPLQNSVEEL 635
Query: 852 WALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRR 911
++LLNF+ P F S +F E F L EE +++L +L+P +LRR
Sbjct: 636 FSLLNFLEPSQFPSETAFLEEFGD------------LKTEEQ---VKKLQSILKPMMLRR 680
Query: 912 LKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIM 971
LK DVEK+L K E +++ +++ +Q K Y+ +L+ F+ ++ + N +M
Sbjct: 681 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN---LINTMM 737
Query: 972 QLRKICNHPFVFEEVEDQI-NPARETND---------TIWRSAGKFELLERILPKFKATG 1021
+LRK CNHP++ E++I R+T+ + ++AGK L++++LPK A G
Sbjct: 738 ELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGG 797
Query: 1022 HRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLST 1081
H+VLIF QM + +DI+ED+L Y R+DG + + R A ++ F P+SD F FLL T
Sbjct: 798 HKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCT 857
Query: 1082 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILD 1141
RAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIGQ V++ RLIT NS E + D
Sbjct: 858 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFD 917
Query: 1142 KAHAKLDIDGKVIQ 1155
KA KL +D V+Q
Sbjct: 918 KASLKLGLDKAVLQ 931
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 355 bits (912), Expect = 2e-97
Identities = 207/520 (39%), Positives = 308/520 (58%), Gaps = 60/520 (11%)
Query: 668 IKEEVKQQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 725
+ ++ + QP L G L +Q++G+ W+ + + ILADEMGLGKTIQT+ L
Sbjct: 249 LNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYS 308
Query: 726 LYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNRE--- 782
L++ GPFL+ VPLSTLTNW E + WAP+L + + G K +A+I+ E
Sbjct: 309 LFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGG----KTARAVIRKHEISF 364
Query: 783 ----------------FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLT 826
F+V+LT++E+I + L I W ++DE HR+++ QSK
Sbjct: 365 EEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRI 424
Query: 827 LNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI 886
L+ Y Y+L+LTGTPLQNNL EL+ LLNF+ FN +++F F
Sbjct: 425 LSKY-RIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTD----------- 472
Query: 887 ALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKH 946
+S+EE ++RLH++L P +LRRLK DV K +P K E +++ ++S++Q K Y+ +L
Sbjct: 473 -VSKEEQ---VKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHIL-- 526
Query: 947 RRLFIFDDSSNQKFSSSRGFN------NQIMQLRKICNHPFVFEEVEDQ--INPARETN- 997
+ N K + +G N +M LRK CNHP++F ++ I+P+
Sbjct: 527 --------TKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEM 578
Query: 998 DTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKS 1057
++ +++GK +LL ++L + KA HRVL+F QMT++++++E FL +Y R+DG K
Sbjct: 579 SSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKG 638
Query: 1058 DDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 1117
D R ++ FN P S++F FLLSTRAGGLG+NL TADTVIIFD+DWNPH D+QA RAHR
Sbjct: 639 DLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHR 698
Query: 1118 IGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
+GQK +V I R +T NSVEE I+ A K+ + V++ G
Sbjct: 699 MGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPG 738
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 336 bits (862), Expect = 1e-91
Identities = 197/482 (40%), Positives = 286/482 (58%), Gaps = 24/482 (4%)
Query: 679 LVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLV 738
L G L+ YQL+G+ W+ F+ IL DEMGLGKT QTI+L YL GPFL+
Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLI 100
Query: 739 IVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNRE-FDVVLTTFEYIIKER 797
+ PLS L+NW E ++AP L + + G ER Q +K F V+LTT+E +K+
Sbjct: 101 LCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDA 160
Query: 798 PLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNF 857
L W ++DE HR+KN S L TL+ + + L+LTGTP+QN+L EL++LL+F
Sbjct: 161 SFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEF-SVVFSLLLTGTPIQNSLQELYSLLSF 219
Query: 858 VLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVE 917
V P +F+ + D F + + +K + S E LHK+L+PFLLRR+K +V
Sbjct: 220 VEPDLFSKEEVGD--FIQRYQDI---EKESESGNE-------LHKLLQPFLLRRVKAEVA 267
Query: 918 KDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKIC 977
+LP K E V+ MSALQ K Y+ +L + L F++ + +K N + QLRK
Sbjct: 268 TELPKKTEVVIYHGMSALQKKYYKAILM-KDLDAFENETAKKVK----LQNILSQLRKCV 322
Query: 978 NHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIM 1037
+HP++F+ VE + E D + ++GK LL+++L + GHRVL+F QMTQ++DI+
Sbjct: 323 DHPYLFDGVEPE---PFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDIL 379
Query: 1038 EDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVI 1097
+D++ Y Y R+DG + ++R + F F FLLSTRAGG+G+NL ADTVI
Sbjct: 380 QDYMDYRGYSYERVDGSVRGEERHLAIKNFG--QQPIFVFLLSTRAGGVGMNLTAADTVI 437
Query: 1098 IFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
D+D+NP DLQA RAHRIGQ V+++RLI ++VEE + KA +KL + +I+ G
Sbjct: 438 FVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMIIEGG 497
Query: 1158 KF 1159
F
Sbjct: 498 HF 499
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 336 bits (862), Expect = 1e-91
Identities = 196/544 (36%), Positives = 307/544 (56%), Gaps = 79/544 (14%)
Query: 673 KQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGV 732
++ P G L+EYQL+GL W+++ + + I+ADEMGLGKT+Q+++ + L+
Sbjct: 291 EESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDY 350
Query: 733 HGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREF--------- 783
P LV+ PLS + +W EF+ W LR + + E +P +ALI EF
Sbjct: 351 CAPVLVVTPLSIIPHWEREFEAWTD-LRVLKYH----ENRPGRALIAEYEFVLKKNNLEI 405
Query: 784 ---DVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILT 840
DV++TT++ ++ E+ LS+ + I DE HR+KNA+SK + L T + ++++L+
Sbjct: 406 RLFDVLITTYDTVMAEQEHLSQFHFSVGIFDEAHRLKNAKSKAATILRTLKFN-HKVLLS 464
Query: 841 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRL 900
GTPLQNN+ ELW+LLNF+ P F+S+ F F E + + +L
Sbjct: 465 GTPLQNNISELWSLLNFIDPMRFSSLPHFLGEFKM----------------ENINDVEKL 508
Query: 901 HKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKF 960
+LRP +LRR+K+DVEK +P K E +++ ++ +Q + Y+ +L+ F+
Sbjct: 509 QGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLTKGGKE--- 565
Query: 961 SSSRGFNNQIMQLRKICNHPFVFEEVEDQI------------------NPARETNDTI-- 1000
S+ N +M+LRK C HP++ + E+QI N T++ +
Sbjct: 566 -SAPNLLNVMMELRKCCIHPYLIKGAEEQILSGYLKKKRERSKAEGAENDITLTSEVLNE 624
Query: 1001 --------------------WRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDF 1040
+S+GK LL+++L K K GH+VLIF QMT+ +D++ ++
Sbjct: 625 DEHQDGNSVISDIDEYYKIFIQSSGKLVLLDKLLGKLK-DGHKVLIFSQMTRCLDLLAEY 683
Query: 1041 LRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFD 1100
L Y KY R+DG ++++R A ++ F+ SD F FLLSTRAGG+G+NL ADTVIIFD
Sbjct: 684 LAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLSTRAGGVGINLTAADTVIIFD 743
Query: 1101 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
+DWNP DLQAQ R HRIGQ +EV++ RL+T+N+ E + DKA KL +D V+Q F+
Sbjct: 744 SDWNPQNDLQAQARCHRIGQTSEVKVYRLVTENTYEREMFDKAGLKLGLDRAVLQKMTFE 803
Query: 1161 NKST 1164
+ +
Sbjct: 804 EQKS 807
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 336 bits (861), Expect = 2e-91
Identities = 197/499 (39%), Positives = 289/499 (57%), Gaps = 32/499 (6%)
Query: 671 EVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
E QPS + GGTL YQLKGL W+ + H ILADEMGLGKT+Q IS ++ L+
Sbjct: 543 EWHSQPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRH 602
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP-------KQALIKNREF 783
P LVIVP +T+ NW E KWAP L+ G R Q K+
Sbjct: 603 KCF-PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVST 661
Query: 784 DVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTP 843
V++ + + +E LL K +W I+DEG R+KN QS L L++ SD++L+LTGTP
Sbjct: 662 HVLVISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSV-KSDFKLLLTGTP 720
Query: 844 LQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKV 903
LQNN+ EL+ LL F+ P N+ + + + ++ + E + LH++
Sbjct: 721 LQNNVRELFNLLQFLNPMKINAAEL--------------EKRYSIIDTEK---VTELHQI 763
Query: 904 LRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSS 963
L+PF LRR+K +V + P KVE ++ M+ +Q LY+ +L + + + SSS
Sbjct: 764 LKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSS 823
Query: 964 RG-----FNNQIMQLRKICNHPFVFE-EVEDQINPARETNDTIWRSAGKFELLERILPKF 1017
G NN +MQLRK HP+++ ++ED+ P ++ ++ KF +L ++PK
Sbjct: 824 GGQRTTSLNNILMQLRKTLAHPYIYSPDIEDRNLPYELAMRSLEEASCKFLILRLLVPKL 883
Query: 1018 KATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCF 1077
GHR+L+F Q Q +DI+ED+ Y ++ Y R DG + +R + +++FNAPNS+ CF
Sbjct: 884 ITRGHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCF 943
Query: 1078 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
LLSTRAGG+G+NL +ADTVII D D+NPHQD+QA RAHR GQK +V + L T +SVEE
Sbjct: 944 LLSTRAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEE 1003
Query: 1138 AILDKAHAKLDIDGKVIQA 1156
I+ A KL +D ++++
Sbjct: 1004 KIIQNAQKKLVLDHLIVES 1022
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 334 bits (857), Expect = 6e-91
Identities = 197/496 (39%), Positives = 290/496 (57%), Gaps = 43/496 (8%)
Query: 674 QQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVH 733
+QP L GG L +QL+ L W+ ++ N ILADEMGLGKT+ + L+ LY GV
Sbjct: 665 EQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVA 724
Query: 734 GPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNRE----------- 782
P LV+VPLST+ NW +EF WAP L + + G R A+I++ E
Sbjct: 725 RPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGR----AIIRDYEWHAKNSTGTTK 780
Query: 783 ------FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYR 836
F+V+LTT+E ++ + L + W ++DEGHR+KN++SKL LNT+ +R
Sbjct: 781 KPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQ-HR 839
Query: 837 LILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLV 896
++LTGTPLQNN+ E++ LLNF+ P F S+ SF+E F+ L+ E
Sbjct: 840 VLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFHD------------LTSAEK--- 884
Query: 897 IRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSS 956
+ L K++ P +LRRLKKD +++P K E+++ +++++Q + Y+ ML + +
Sbjct: 885 VEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIG- 943
Query: 957 NQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPK 1016
K + + N +MQLRK+CNHP++ E + +D +++ K LL +L
Sbjct: 944 --KGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKV 1001
Query: 1017 FKATGHRVLIFFQMTQVMDIMEDFLR--YLDMKYLRLDGHTKSDDRTALLNTFNAPNSDY 1074
GHRVLIF QMT+++DI+ED+L + + R+DG DR A + FN + +
Sbjct: 1002 LHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQ-DKNR 1060
Query: 1075 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNS 1134
F FLLSTRA GLG+NL TADTVII+D+D+NPH D+QA +RAHRIGQ + + RL+ S
Sbjct: 1061 FVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRAS 1120
Query: 1135 VEEAILDKAHAKLDID 1150
VEE IL A KL +D
Sbjct: 1121 VEERILQLAKKKLMLD 1136
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 314 bits (805), Expect = 6e-85
Identities = 200/531 (37%), Positives = 292/531 (54%), Gaps = 62/531 (11%)
Query: 672 VKQQPSILVGGT-LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
+ +QP +L G L +YQ+ GL W+ + +NGILADEMGLGKTIQ I+ L YL E
Sbjct: 276 IVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENG 335
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKN---REFDVVL 787
L++VP STL NW AE +W P+L + G ER+ + FDV+L
Sbjct: 336 LSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLL 395
Query: 788 TTFEYI---IKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
TT+ + +ER + K + I DE H +KN ++ L T ++ R++LTGTPL
Sbjct: 396 TTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI-NARMRILLTGTPL 454
Query: 845 QNNLPELWALLNFVLPKIF-NSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKV 903
QNNL EL +LL FV+PK F S++ F + G QD+++ +E I+R ++
Sbjct: 455 QNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQ---IQRAKRI 511
Query: 904 LRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSS 963
++PF+LRRLKKDV K+LP K+ V K MS+ Q Y +++ + + ++ + SSS
Sbjct: 512 MKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDY-----YSNNKGEVCSSS 566
Query: 964 RGFNNQIM-QLRKICNHP-------------------------------FVFEE------ 985
IM ++R+I NHP ++FEE
Sbjct: 567 ERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSD 626
Query: 986 --VEDQINPAR----ETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMED 1039
V +N + D + +GKF L+ +LPK KA GHRVL+F Q T ++DI+E+
Sbjct: 627 FQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEE 686
Query: 1040 FLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIF 1099
+LR + RLDG T + R L+ FN +S F FLLST+AGG+G+NL ADT +I
Sbjct: 687 YLRIRKFGFCRLDGATAVNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIH 745
Query: 1100 DTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDID 1150
D D+NP+ D QA+DR HR+GQ+ V I RLI+++++EE IL A KL ++
Sbjct: 746 DIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLE 796
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 313 bits (803), Expect = 1e-84
Identities = 203/541 (37%), Positives = 303/541 (55%), Gaps = 66/541 (12%)
Query: 674 QQPSILVGG-TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGV 732
+QPSIL +LK YQ GL W+ + + LNGILADEMGLGKTIQ I+ L YLY+ +G
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQ-EGN 544
Query: 733 HGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNR--EFDVVLTTF 790
+GP L++VP ST+ NW E + W P L+ + + G ERK + I +R +++V++TT+
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTY 604
Query: 791 EYIIK---ERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNN 847
I +R L ++K + I DEGH +KN S L T +++ RL+LTGTP+QNN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMT-INANNRLLLTGTPVQNN 663
Query: 848 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPF 907
L EL +LLNFV+P +F+S S E + T D+ ++ E+E I ++++PF
Sbjct: 664 LLELMSLLNFVMPHMFSS--STSEIRRMFSSKTKSADEQSIYEKER---IAHAKQIIKPF 718
Query: 908 LLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFN 967
+LRR+K++V K LP K +++ C MS Q +LY + + I + N +
Sbjct: 719 ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMC------ 772
Query: 968 NQIMQLRKICNHP-------------------------------FVFEEVE--------- 987
N +MQLRK+ NHP +FE++E
Sbjct: 773 NVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHV 832
Query: 988 -----DQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLR 1042
IN + D I S GKF +L IL + K G RV++F Q T ++DI+E L+
Sbjct: 833 LCKQYRHINNFQLDMDLILDS-GKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLK 891
Query: 1043 YLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTD 1102
+ +YLRLDG T+ +R L++ FN + D F FLLST+AGGLG+NL +A+ VI+ D D
Sbjct: 892 HHQHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDID 950
Query: 1103 WNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNK 1162
NP+ D QA+DR HR+GQ EV +++LI+ ++EE++L KL ++ + + D
Sbjct: 951 CNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEG 1010
Query: 1163 S 1163
S
Sbjct: 1011 S 1011
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 309 bits (791), Expect = 3e-83
Identities = 181/494 (36%), Positives = 287/494 (57%), Gaps = 32/494 (6%)
Query: 680 VGGTLKEYQLKGLQWMVSLFNNHLNGILA-DEMGLGKTIQTISLLTYLYEAKGVHGPFLV 738
V TLK +Q++G+ W++ + +N +L D+MGLGKT+Q IS L+YL +G+ GPFLV
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLV 106
Query: 739 IVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNR----EFDVVLTTFEYII 794
+ PLS W +E +++ P L + + G R + + + FDV+LTT++ +
Sbjct: 107 LCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLLTTYDIAL 166
Query: 795 KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWAL 854
++ LS+I W + IIDE R+KN S L L + RL++TGTP+QNNL ELWAL
Sbjct: 167 VDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWAL 226
Query: 855 LNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKK 914
++F +P +F ++ + F + F TG D + +S ++ + L +L F+LRR K
Sbjct: 227 MHFCMPLVFGTL----DQFLSAFKETG--DGLDVSNDKE--TYKSLKFILGAFMLRRTKS 278
Query: 915 DVEKD----LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQI 970
+ + LP E + + +LQ K+Y +L+ + + SS S+ N +
Sbjct: 279 LLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGG--SNHTSLQNIV 336
Query: 971 MQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQM 1030
+QLRK C+HP++F +E + E + + +++GK +L+++L + +GHRVL+F QM
Sbjct: 337 IQLRKACSHPYLFPGIEPE---PFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQM 393
Query: 1031 TQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPN----------SDYFCFLLS 1080
T +DI++DF+ Y RLDG ++++R A + F+A S+ F F++S
Sbjct: 394 TSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMIS 453
Query: 1081 TRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
TRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ + V + L+T++SVEE IL
Sbjct: 454 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVIL 513
Query: 1141 DKAHAKLDIDGKVI 1154
+A KL + V+
Sbjct: 514 RRAERKLQLSHNVV 527
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 306 bits (783), Expect = 2e-82
Identities = 198/547 (36%), Positives = 289/547 (52%), Gaps = 67/547 (12%)
Query: 672 VKQQPSILVGGT-LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
V +QP L LK YQL G+ W+ L+ L+GILADEMGLGKT Q ++ L E +
Sbjct: 537 VTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLE-Q 595
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNRE--FDVVLT 788
G HGP LV+VP STL NW E ++ P LR + G ER + I+ E +D+++T
Sbjct: 596 GHHGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEIKYDILVT 655
Query: 789 TFEYII---KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQ 845
T++ ++R L + + DEGH +KN S+ L ++++RL+LTGTPLQ
Sbjct: 656 TYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMN-LNANFRLLLTGTPLQ 714
Query: 846 NNLPELWALLNFVLPKIFNS-VKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
NNL EL +LL F+LP +F+S + D F ++ LS++ I R ++
Sbjct: 715 NNLKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIEQALLSKQR----ISRAKTMM 770
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQ--MLKHRRLFIFDDSSNQKFSS 962
PF+LRR K V DLP K + + CK+S Q ++Y + L+ + DD N++ +
Sbjct: 771 TPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKN 830
Query: 963 -------SRGFNNQIMQLRKICNHPFVFEEV---------------EDQINPARE----- 995
S + +MQLRK NH +F + E+Q A E
Sbjct: 831 DEESDGKSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYE 890
Query: 996 ------------------------TNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMT 1031
D W +GK +L+ +LPK K G R+L+F Q T
Sbjct: 891 DMEVMSDFELHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKEEGSRILLFSQFT 950
Query: 1032 QVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQ 1091
Q++DI+E L L + Y+RLDG T+ + R +++ F+ D FLLST+AGG G+NL
Sbjct: 951 QMLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFH-KEEDVTVFLLSTKAGGFGINLA 1009
Query: 1092 TADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDG 1151
A+ VI++D +NP DLQA+DRAHR+GQ EV ++RLITDN++EE I A+ KL +D
Sbjct: 1010 CANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLANTKLALDM 1069
Query: 1152 KVIQAGK 1158
+ GK
Sbjct: 1070 SLSSDGK 1076
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 305 bits (782), Expect = 3e-82
Identities = 203/551 (36%), Positives = 297/551 (53%), Gaps = 69/551 (12%)
Query: 652 DDLERERIDYYEVAHSIKEEVKQQPSILVGG-TLKEYQLKGLQWMVSLFNNHLNGILADE 710
DD + E+ E QQPS + G TLK YQ+ GL W+ ++ L+GILADE
Sbjct: 381 DDKKMEQFLNTSTGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADE 440
Query: 711 MGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPME 770
MGLGKT Q IS L L E KG+ LV+VP STL NW EF+K+ P LR ++ G E
Sbjct: 441 MGLGKTCQVISFLASLKE-KGIQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSE 499
Query: 771 RKPKQALIKNREFDVVLTTFEYII---KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTL 827
R K+ + + +FDV++TT++ +R L K ++ +I DEGH +KN S+ L
Sbjct: 500 RINKRYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHL 559
Query: 828 NTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIF-NSVKSFDEWFNTPFANTGGQDKI 886
+++RL++TGTPLQNNL EL +LL F+LPK+F N+++ D + + G ++
Sbjct: 560 MN-IPANFRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERA 618
Query: 887 ALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKH 946
LS+E I R ++ PF+LRR K++V DLP K++ V C M Q LY +L+
Sbjct: 619 YLSQER----ISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLEL 674
Query: 947 RRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNH--------------------------- 979
+ L ++N++ N +MQLRK H
Sbjct: 675 KNLV----NANRE--------NILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYL 722
Query: 980 ----PFVFEEVE-----------DQINPAR--ETNDTIWRSAGKFELLERILPKFKATGH 1022
++FE++E DQ W + K + L +L K +
Sbjct: 723 DANPQYIFEDMEVMSDFELHKLADQYRHLHPFALKGKPWMDSAKVKKLCSLLKKSR-PNE 781
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
R+LIF Q TQV+DI+E L LD+++LRLDG T + R L++ F+ N +Y FLLST+
Sbjct: 782 RILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHT-NENYKVFLLSTK 840
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
+GG G+NL A+ VI+FD +NP D+QA+DRAHR+GQ V + RLIT N++EE I
Sbjct: 841 SGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRL 900
Query: 1143 AHAKLDIDGKV 1153
A+ KL ++ +
Sbjct: 901 ANTKLTLESSL 911
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 298 bits (763), Expect = 4e-80
Identities = 194/546 (35%), Positives = 303/546 (54%), Gaps = 54/546 (9%)
Query: 655 ERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLG 714
ERER ++ K + + P I + TL++YQ G+ W+ L HL+GIL D+MGLG
Sbjct: 1244 ERERDFIQQMMDPSKAKPFKLP-IAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLG 1302
Query: 715 KTIQTISLLT---YL----YE-AKGVHG---PFLVIVPLSTLTNWNAEFDKWAPKLRKIA 763
KT+QTI ++ YL YE + V P L+I P S +W EFD++AP L+ +
Sbjct: 1303 KTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVV 1362
Query: 764 FKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKL 823
+ G P R + + + D+++T+++ + +L+K ++ + ++DEGH +KN+QSKL
Sbjct: 1363 YAGGPTVRLTLRPQLSDA--DIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKL 1420
Query: 824 SLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ 883
+ + +++RLILTGTP+QNN+ ELW+L +F++P + K F E F P A +
Sbjct: 1421 AKAVKEIT-ANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNS 1479
Query: 884 DKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQM 943
+ +E +L + LHK + PF+LRRLK+DV DLP K+ + C++ LQ +LY
Sbjct: 1480 KTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDF 1539
Query: 944 LKHRRLFIFDDSSNQKFSSSRGFNNQIMQ-LRKICNHPFV--------FEEVEDQI-NPA 993
K ++ + D N + + + Q +Q +RK+CNHP + +V+D +
Sbjct: 1540 TKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTG 1599
Query: 994 RETNDTIWRSAGKFELLERILPKF---------KA------------TGHRVLIFFQMTQ 1032
+ +D I +A K L +L + KA + HR LIF Q+
Sbjct: 1600 LDLHDII--NAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKD 1657
Query: 1033 VMDIMED--FLRYL-DMKYLRLDGHTKSDDRTALLNTFNA-PNSDYFCFLLSTRAGGLGL 1088
++D++E+ F +Y+ + Y+RLDG DR ++ FN P+ D C LL+T+ GGLGL
Sbjct: 1658 MLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSID--CLLLTTKVGGLGL 1715
Query: 1089 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLD 1148
NL ADTVI + DWNP DLQA DRAHRIGQK V + R+IT ++EE I+ K++
Sbjct: 1716 NLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMN 1775
Query: 1149 IDGKVI 1154
I V+
Sbjct: 1776 IASTVV 1781
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 290 bits (741), Expect = 2e-77
Identities = 220/667 (32%), Positives = 337/667 (49%), Gaps = 98/667 (14%)
Query: 562 KEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQ 621
+ E KRI K ++ ++ D++ ++ +D D L ++ +
Sbjct: 464 ERETKRIRNTTKPKV--VEDEDDDVDLEAID------------------DELPQSEHEDD 503
Query: 622 SFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHS-------IKEEVKQ 674
+ ++ E + D +E E + GD + D DD+ R + + ++ + I + K
Sbjct: 504 DYEEED-EDYNDEEEDVEYDDGDDDD-DDDDEFVATRKNTHVISTTSRNGRKPIVKFFKG 561
Query: 675 QPSILVGG-TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVH 733
+P +L +LK+YQ G+ W+ L+ N ++ ILAD+MGLGKT Q IS YL +
Sbjct: 562 KPRLLSPEISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQI-NEP 620
Query: 734 GPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNR--EFDVVLTTFE 791
GP LV+VP STL NW EF K+AP L+ + G ER+ + +++ ++DV++TT+
Sbjct: 621 GPHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYN 680
Query: 792 YIIKERPLLSKIK---WVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNL 848
+ +S +K + + DEGH +KN+ S+ L +++RL+LTGTPLQNNL
Sbjct: 681 LAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKL-MKIRANFRLLLTGTPLQNNL 739
Query: 849 PELWALLNFVLPKIFNSVK-SFDEWFNTPFANT-GGQDKIALSEEETLLVIRRLHKVLRP 906
EL +LL F++P +F S K SFD F T ++ L +E I R +++P
Sbjct: 740 KELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQE---AITRAKTMMKP 796
Query: 907 FLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLY----QQMLKHRRLF----IFDDSSNQ 958
F+LRR K V K LP K + C+++A+Q K+Y Q +L+H+R+ + D+ +
Sbjct: 797 FILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEK 856
Query: 959 KFSSSRGFNNQIMQLRKICNHPFVFEEV-EDQI----------NPARETN---------- 997
S N IM LRK HP +F + D+I PA N
Sbjct: 857 SKLQSSSSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILDEPAYAENGNKEYIKEDM 916
Query: 998 -------------------------DTIWRSAGKFELLERILPKFKA-TGHRVLIFFQMT 1031
+ W +GK + L+++L +VLIF T
Sbjct: 917 SYMTDFELHKLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKTIIVDKQEKVLIFSLFT 976
Query: 1032 QVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQ 1091
QV+DI+E L LD K+LRLDG T+ +DR L++ F + D F+LST+AGG G+NL
Sbjct: 977 QVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKF-YEDKDIPIFILSTKAGGFGINLV 1035
Query: 1092 TADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDG 1151
A+ VIIFD +NPH D QA DRAHR+GQ EV I LIT +S+EE I A KL +D
Sbjct: 1036 CANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDS 1095
Query: 1152 KVIQAGK 1158
+ + K
Sbjct: 1096 YISEDKK 1102
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 287 bits (734), Expect = 1e-76
Identities = 192/556 (34%), Positives = 291/556 (51%), Gaps = 64/556 (11%)
Query: 652 DDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEM 711
D E+ER ++ + K E P + + L++YQ +G+ W+ L L+GIL D+M
Sbjct: 9 DSREKERKFLEQMLNPSKVEAFSIP-VPISADLRKYQQEGVNWLAFLNKYELHGILCDDM 67
Query: 712 GLGKTIQTISLLTY-------LYEAKG----VHGPFLVIVPLSTLTNWNAEFDKWAPKLR 760
GLGKT+QTI ++ L+E G H P L++ P + +W E +AP L+
Sbjct: 68 GLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYAPFLK 127
Query: 761 KIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQ 820
A+ GPP ER ++ K ++ DVV+T+++ + L KI W + ++DEGH +KNA+
Sbjct: 128 VSAYVGPPAERAKIRS--KMKKSDVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIKNAR 185
Query: 821 SKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANT 880
+KL+ + + S +RLIL+GTP+QNN+ ELW+L +F++P + K+F E F P A +
Sbjct: 186 AKLTKAVKSL-RSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAAS 244
Query: 881 GGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLY 940
+ E L + +HK + PF+LRRLK+DV DLP K+ + C MS LQ KL
Sbjct: 245 RDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQDYYCDMSDLQRKLL 304
Query: 941 QQMLKHRRL-FIFDDSSNQKFSSSRGFNNQ-------IMQLRKICNHPFVFEEVEDQINP 992
+ + +D +K +R +Q + +RK+CNHP + + + +P
Sbjct: 305 NDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPAL---ILTEKHP 361
Query: 993 ARE--TNDTIWRSAGKFELLERILPKFKATG----------------------------H 1022
R ++G +L + PK A G H
Sbjct: 362 KRNAIVKQLAKENSGLHDL--KHAPKLTALGQLLRDCGLGNSSVNSNGIDSALTNAVSEH 419
Query: 1023 RVLIFFQMTQVMDIME-DFLRYL--DMKYLRLDGHTKSDDRTALLNTF-NAPNSDYFCFL 1078
RVLIF Q+ ++D++E D L+ D+ Y+RLDG + R + F N P+ D L
Sbjct: 420 RVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSID--VLL 477
Query: 1079 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEA 1138
L+T GGLGLNL ADTVI + DWNP +DLQA DRAHRIGQK V + RLIT +EE
Sbjct: 478 LTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEK 537
Query: 1139 ILDKAHAKLDIDGKVI 1154
I+ K+++ V+
Sbjct: 538 IMGLQRFKMNVASTVV 553
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 286 bits (733), Expect = 1e-76
Identities = 189/565 (33%), Positives = 290/565 (50%), Gaps = 76/565 (13%)
Query: 654 LERERIDYYEVAHSIKEEVK-------QQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGI 706
L R D + AH++ ++ + Q P + G TL +YQL G++W++ ++N LN I
Sbjct: 357 LSRILDDCKDHAHTVTKDFERCTEGPLQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAI 416
Query: 707 LADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKG 766
L DEMGLGKTIQ ++ L+YL + G GP L++VP ST+ NW EF KW P ++ + + G
Sbjct: 417 LGDEMGLGKTIQIVAFLSYLKQI-GKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYG 475
Query: 767 PPMERKPKQALIKNRE--FDVVLTTFEYIIK---ERPLLSKIKWVHTIIDEGHRMKNAQS 821
ERK + +K ++ DV+LTT+ + ++ + I DEGH +KN S
Sbjct: 476 SQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDS 535
Query: 822 KLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG 881
+ L +++LTGTPLQNNL EL +L+ FVL K+FN F G
Sbjct: 536 ERYRGL-MKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLG 594
Query: 882 ---GQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHK 938
AL +++ I +L+P++LRRLK V LP K E++++ +M Q +
Sbjct: 595 PALDTKNKALYQQDR---IEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQ 651
Query: 939 LYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFV--FEEVEDQINPARE- 995
LY +++ + Q+ S +M+LR+ NHP + E + +++ +
Sbjct: 652 LYDNIVE----------ALQQSEESGDSYGSLMRLRQAANHPLLRRSEYTDQKLDKIAKM 701
Query: 996 ----------------TNDTIWRS--------------------------AGKFELLERI 1013
+ D W S +GK E L+ +
Sbjct: 702 LCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCEQLDVM 761
Query: 1014 LPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSD 1073
LP+ + G +VLIF Q T ++DI+E +L Y RLDG T DR ++N FN + D
Sbjct: 762 LPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNL-SKD 820
Query: 1074 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDN 1133
F FLLSTRAGGLG+NL +A+ +II D D+NP+ D QA+DR HR+GQ+ V + RL++
Sbjct: 821 LFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKG 880
Query: 1134 SVEEAILDKAHAKLDIDGKVIQAGK 1158
+VE +L A KL ++ +V K
Sbjct: 881 TVEVGMLALAKKKLQLEKQVTDGVK 905
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 285 bits (729), Expect = 4e-76
Identities = 170/495 (34%), Positives = 267/495 (53%), Gaps = 30/495 (6%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYL-----------YEAKGV 732
L +YQ G++W+ L GIL DEMGLGKTIQ I+ L L Y +G+
Sbjct: 507 LFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGL 566
Query: 733 HGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREF--DVVLTTF 790
GP +++ P + + W EF W P R K+ LI++ +++T++
Sbjct: 567 -GPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHGILITSY 625
Query: 791 EYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPE 850
YI + +S+ W + I+DEGH+++N + ++L + + +R+IL+G+P+QNNL E
Sbjct: 626 SYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQF-RTPHRIILSGSPMQNNLRE 684
Query: 851 LWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLR 910
LW+L +F+ P ++ F E F+ P G + + + L + P+LLR
Sbjct: 685 LWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLR 744
Query: 911 RLKKDVEKDL--PDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNN 968
R+K DV+ L PDK E+VL C+++ QHK+YQ + + ++ + Q FS
Sbjct: 745 RMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGEMQIFSG------ 798
Query: 969 QIMQLRKICNHPFVFEEVEDQI-----NPARETNDTIWRSAGKFELLERILPKFKATGHR 1023
++ LRKICNHP +F + + E W+ +GK ++E +L + G R
Sbjct: 799 -LIALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHKQGQR 857
Query: 1024 VLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRA 1083
VL+F Q Q++DI+E FLR YL++DG T R L+ +N S F FLL+TR
Sbjct: 858 VLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTS-IFVFLLTTRV 916
Query: 1084 GGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKA 1143
GGLG+NL A+ V+I+D DWNP D QA++RA RIGQK +V + RL+T ++EE I +
Sbjct: 917 GGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQ 976
Query: 1144 HAKLDIDGKVIQAGK 1158
K + +V++ K
Sbjct: 977 IFKQFLTNRVLKDPK 991
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 281 bits (718), Expect = 7e-75
Identities = 202/646 (31%), Positives = 300/646 (46%), Gaps = 65/646 (10%)
Query: 561 EKEELKRIERNAKQRLQALKAN------DEEAYIKLLDQTKDTRITHLLKQTNTFLDSLT 614
E E+ I+R + A KA D E KL T R L +T D+
Sbjct: 245 ENEDSSIIDRAVQSMSLAAKARPTTKLLDAEDLPKLEPPTAPFRRLRKLYKTPNSPDNEA 304
Query: 615 KAVKDQQSFTKD------KIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSI 668
K K + K K + ++ S GD + E E +D ++ A
Sbjct: 305 KKRKAGKKSKKTRPLPEKKWRKRISREDSSLQGSGDGRRILTTSSCEEEELDDFDDADDN 364
Query: 669 KEEVKQQPSIL-----VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLL 723
+ Q L + L +YQ G+QW+ L GI+ DEMGLGKTIQ +S L
Sbjct: 365 ERSSVQLEGGLNIPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFL 424
Query: 724 TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAF----------KGP------ 767
L+ +K ++ P ++I P++ L W E KW P KG
Sbjct: 425 GSLHFSK-MYKPSIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASES 483
Query: 768 --------PMERKPKQALIK----------NREFDVVLTTFEYIIKERPLLSKIKWVHTI 809
+ +PK K N E +++TT+E + + L I+W + +
Sbjct: 484 DYDSESSVDSDHEPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAV 543
Query: 810 IDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSF 869
+DEGHR++N S ++L + +R+I+TG P+QN L ELW+L +FV P + F
Sbjct: 544 LDEGHRIRNPNSDITLVCKQL-QTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 602
Query: 870 DEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLK 929
+ F+ P G + L L ++ P+LLRR+K DV L K E VL
Sbjct: 603 EAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLF 662
Query: 930 CKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQ 989
C ++ Q Y R F+ Q F +R I +RKICNHP + E
Sbjct: 663 CSLTVEQRSTY-------RAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSH 715
Query: 990 INPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYL 1049
NP + +GK +++ +L +K GHRVL+F Q Q++DI+E FL + Y
Sbjct: 716 QNPDYGNPER----SGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYR 771
Query: 1050 RLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1109
R+DG T R AL++ FN + D F F+L+T+ GGLG NL A+ VIIFD DWNP D+
Sbjct: 772 RMDGLTPVKQRMALIDEFNN-SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDM 830
Query: 1110 QAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQ 1155
QA++RA RIGQK +V + RLIT ++EE + + K + K+++
Sbjct: 831 QARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK 876
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 280 bits (716), Expect = 1e-74
Identities = 174/521 (33%), Positives = 268/521 (51%), Gaps = 64/521 (12%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L YQ +QW+ L+ + GI+ DEMGLGKTIQ I+ + L+ + + GP L++ P +
Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPAT 356
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPP--------------------MERKP---------- 773
+ W EF W P LR + M KP
Sbjct: 357 VMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKN 416
Query: 774 ----KQALIKNREFD-----------VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKN 818
K+AL + D +++TT+ + L K+KW + ++DEGH+++N
Sbjct: 417 STRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRN 476
Query: 819 AQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFA 878
S++SLT + R+IL+GTP+QNNL ELW+L +F+ P ++ F + F P
Sbjct: 477 PDSEISLTCKKL-KTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPIN 535
Query: 879 NTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHK 938
G + + + L ++ P+LLRR+K DV KDLP K E VL CK++ Q
Sbjct: 536 IGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRS 595
Query: 939 LYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETND 998
Y + F+ NQ + R I LRKICNHP + + + NP + D
Sbjct: 596 KYLE-------FLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNP--DYGD 646
Query: 999 TIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLD-----MKYLRLDG 1053
+ +GK ++++++L + G++ L+F Q Q++DI+E+F+ D + YLR+DG
Sbjct: 647 P--KRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDG 704
Query: 1054 HTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 1113
T R +L++ FN N + FLL+TR GGLG+NL A+ +IIFD DWNP D+QA++
Sbjct: 705 TTNIKGRQSLVDRFN--NESFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARE 762
Query: 1114 RAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
RA RIGQK EV I RL+ S+EE I + K + +++
Sbjct: 763 RAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRIL 803
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 277 bits (708), Expect = 1e-73
Identities = 195/544 (35%), Positives = 268/544 (48%), Gaps = 87/544 (15%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNG-ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPL 742
LK YQL G+ +++ L+ + G ILADEMGLGKTIQ I+ LT L GP LV+ P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 743 STLTNWNAEFDKWAPKLRKIAFKGP-----PMERKPKQALIKNREFDVVLTTFEYIIK-- 795
S L NW E KW P + + G E K F+V+L + +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 796 -----ERPLLSKIKWVHTIIDEGHRMKNAQS-KLSLTLNTYYHSDYRLILTGTPLQNNLP 849
+R +L + +W ++DE H +K+ S + ++ +++ RL+LTGTPLQN+L
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 850 ELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLL 909
ELW+LL F+LP IF T D L E +I R+ +L PF+L
Sbjct: 393 ELWSLLEFMLPDIF---------------TTENVDLKKLLNAEDTELITRMKSILGPFIL 437
Query: 910 RRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRR---------LFIFDDSSNQKF 960
RRLK DV + L K+++V M Q Y++ ++ R L +S K
Sbjct: 438 RRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKA 497
Query: 961 SSSRGFNNQIMQLRKICNHPFVFEEV---EDQINPARE---------------------- 995
R +N Q RKI NHP + + ED I AR+
Sbjct: 498 LPKRQISNYFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKG 557
Query: 996 --------------TNDT--------IWRSAGKFELLERILPKFKATGHRVLIFFQMTQV 1033
NDT + SA K L +LP K +GHRVLIF Q T +
Sbjct: 558 FNDFRIHQLLFQYGVNDTKGTLSDKHVMLSA-KCRTLAELLPSMKKSGHRVLIFSQWTSM 616
Query: 1034 MDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTA 1093
+DI+E L + + Y RLDG T+ DR +++TFN S + C LLSTRAGG GLNL A
Sbjct: 617 LDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFAC-LLSTRAGGQGLNLTGA 675
Query: 1094 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
DTVII D D+NP D QA+DR HRIGQ V I RL+T ++V+E I + A KL +D V
Sbjct: 676 DTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAV 735
Query: 1154 IQAG 1157
+++G
Sbjct: 736 LESG 739
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 273 bits (699), Expect = 1e-72
Identities = 183/528 (34%), Positives = 280/528 (52%), Gaps = 70/528 (13%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L++YQ+ G+ W+ L+ L GILADEMGLGKT QTI+ + L + K ++GP LVI P S
Sbjct: 387 LQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMD-KNINGPHLVIAPAS 445
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNRE--FDVVLTTFEYII---KERP 798
T+ NW EF K+ PKL+ + G +ER+ + I + + ++V+LTT+ +R
Sbjct: 446 TMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTYRLAATSKADRL 505
Query: 799 LLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFV 858
L K+ + DEGH +KN S+ L + +D+R++LTGTPLQNNL EL +LL F+
Sbjct: 506 FLRNQKFNVCVYDEGHYLKNRASERYRHLMS-IPADFRVLLTGTPLQNNLKELISLLAFI 564
Query: 859 LPKIFN-SVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVE 917
LP +F+ +KS D F + ++ LSE+ + R ++ PF+LRR K V
Sbjct: 565 LPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQR----VSRAKMMMAPFVLRRKKSQVL 620
Query: 918 KDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFS-----------SSRGF 966
LP K + C+ S + + Y + + D + K + S+ GF
Sbjct: 621 DALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKSTAGF 680
Query: 967 NNQIMQLRKICNHPFVF-----EEV----------EDQINPARE---------------- 995
++QLRK+ +HP +F +++ E Q A E
Sbjct: 681 --VLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNEPQYKKANELYIFEDMQYMSDIELH 738
Query: 996 -------------TNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLR 1042
D W A K L+++L G RV++F Q TQV+DI++ ++
Sbjct: 739 NLCCKFPSINSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMK 798
Query: 1043 YLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTD 1102
L++K+LR DG T+ D R L++ F A S FLLST+AGG G+NL A+ VI++D
Sbjct: 799 SLNLKFLRFDGSTQVDFRQDLIDQFYADES-INVFLLSTKAGGFGINLACANMVILYDVS 857
Query: 1103 WNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDID 1150
+NP DLQA+DRAHR+GQK EV + + + +++EE I A+AK+ +D
Sbjct: 858 FNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLANAKIALD 905
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 273 bits (699), Expect = 1e-72
Identities = 191/535 (35%), Positives = 295/535 (54%), Gaps = 41/535 (7%)
Query: 655 ERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLG 714
+RE +DY SI P + L+ YQ G+ W+ L +L+GIL D+MGLG
Sbjct: 1262 DREFLDYLFNPKSIPNYKVPVP---ISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLG 1318
Query: 715 KTIQTISLLT----YLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPK---LRKIAFKGP 767
KT+QTI +L + A + P LVI P + +W E +K+ + LR + + G
Sbjct: 1319 KTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGF 1378
Query: 768 PMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTL 827
P+ R+ ++ I + ++V+ +++ + K+ S I + + ++DEGH +KN ++K S +
Sbjct: 1379 PVGREKLRSDIGTK-CNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAI 1437
Query: 828 NTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIA 887
+++RLIL+GTP+QNN+ ELW+L +F++P + K F + F+ P ++ A
Sbjct: 1438 KRL-KANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSA 1496
Query: 888 LSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQML-KH 946
+E +L + LH+ + PFLLRR+K+DV KDLP K+ + L C++S LQ +LY+ KH
Sbjct: 1497 KEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKH 1556
Query: 947 RR--LFIFDDSSN-----QKFSSSRGFNNQIMQLRKICNHPFV-------FEEVEDQINP 992
+ L DSS+ + S+ + L+ +CNHP + +V Q+
Sbjct: 1557 LKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLAL 1616
Query: 993 ARETNDTIWRSAGKFELLERIL-------PKFKATGHRVLIFFQMTQVMDIMEDFL--RY 1043
+ + D I SA K L+++L + HR LIF Q+ ++DI+E L R+
Sbjct: 1617 SNSSLDDIEHSA-KLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRH 1675
Query: 1044 L-DMKYLRLDGHTKSDDRTALLNTFNA-PNSDYFCFLLSTRAGGLGLNLQTADTVIIFDT 1101
L + YLRLDG + R ++N FN+ P+ D LL+T GGLGLNL ADTVI +
Sbjct: 1676 LPSVTYLRLDGSVPASQRQDIVNNFNSDPSID--VLLLTTMVGGLGLNLTGADTVIFVEH 1733
Query: 1102 DWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQA 1156
DWNP +DLQA DRAHRIGQK V + RLIT NS+EE I+ K+ V+ A
Sbjct: 1734 DWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSA 1788
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 266 bits (679), Expect = 2e-70
Identities = 166/454 (36%), Positives = 256/454 (55%), Gaps = 49/454 (10%)
Query: 565 LKRIERNAKQRLQALKANDEEAYIKLLDQTKDTR----ITHLLKQTNTFLDSLTKAVKDQ 620
+K+ ERN K R + + + E + +++ ++ R +LL QT F + K +
Sbjct: 147 IKKTERNMKDRFKKAEKEEMERKKREMEEREELRQKRKFEYLLSQTELFSHFILKKNRCG 206
Query: 621 QSFTKDKIESHLDTQELSEDNVGDKNGADSDDD--LERERIDYYEVAHSIKE-----EVK 673
S ++ E E G+ NG + L++ER+ + S K+ EV
Sbjct: 207 LSSAEEA--------ERKEIGAGEYNGMKGYEAAMLQKERLREFGAERSTKKFKEGGEVG 258
Query: 674 Q-------QPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYL 726
+ QPSIL TLKEYQL+GL W+VSL++ +NGILAD+MGLGKT+Q+ISLL +L
Sbjct: 259 ETTTRYVPQPSILKC-TLKEYQLRGLNWLVSLYDKGINGILADDMGLGKTVQSISLLAHL 317
Query: 727 YEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVV 786
YE + V GPFLV+ STL NW EF ++ P R F G P ERK + KN DVV
Sbjct: 318 YETEEVPGPFLVVTISSTLDNWAQEFARFLPSFRVCRFSGSPSERKELKKRFKNS--DVV 375
Query: 787 LTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQN 846
+TT++ + + +L KIKW + I+DE +K++ S+ TL + + + RL+LTGTP+QN
Sbjct: 376 ITTYQTAVSDEKMLKKIKWQYMILDEAQAIKSSMSRRWKTLLS-FKARNRLLLTGTPIQN 434
Query: 847 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRP 906
++ ELWALL+F++P +F+S+ F +WF+ + K +E++L +RLH +L+P
Sbjct: 435 SMQELWALLHFIMPTLFDSLNEFSDWFSKEIETSAIMKKTV--DEKSL---QRLHAILKP 489
Query: 907 FLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGF 966
F+LRR K DV +L K + L C +S Q LY+++ + SS
Sbjct: 490 FMLRRHKSDVIHELGQKTQIDLYCDLSYRQKVLYKEITRS--------------CSSMEM 535
Query: 967 NNQIMQLRKICNHPFVFEEVEDQINPARETNDTI 1000
N +MQL+K+CNHP +F+++E + + E +D I
Sbjct: 536 ENLLMQLKKVCNHPDLFKKLEPRCGLSLEVSDGI 569
Score = 160 bits (405), Expect = 1e-38
Identities = 80/166 (48%), Positives = 113/166 (67%), Gaps = 2/166 (1%)
Query: 998 DTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKS 1057
+T +GK +L+ +LPK KA GHR+L++FQMT+++D++ED+L YLRLDG K+
Sbjct: 719 NTFISDSGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLKA 778
Query: 1058 DDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHR 1117
R ++ + A SD F FLLSTRAGGLG+NL ADTV+ +D+DWNP D QA DRAHR
Sbjct: 779 SARAEVIRDWQA--SDKFIFLLSTRAGGLGINLTAADTVVFYDSDWNPTADQQAMDRAHR 836
Query: 1118 IGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKS 1163
+GQ +V + RLIT +VEE +L+ A+ K +I VI F+ ++
Sbjct: 837 LGQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHGNIFEGEN 882
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 263 bits (673), Expect = 1e-69
Identities = 184/569 (32%), Positives = 284/569 (49%), Gaps = 62/569 (10%)
Query: 635 QELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLK----EYQLK 690
+EL + +N D E E D + + H K+ + + G ++ YQ+
Sbjct: 227 KELRDQASASENNKDRG---EFEGKDEWLLPHPSKKGQTFEGGFTIPGDIRPHLFRYQVT 283
Query: 691 GLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNA 750
+QW+ L+ GI+ DEMGLGKTIQ +S L+ L+ + P L++ P + + W
Sbjct: 284 CVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPATLMKQWVN 343
Query: 751 EFDKWAPKLRKIAF----KGPPMERKPKQALIKNREFD---------------------- 784
EF W LR + G R+ +Q E +
Sbjct: 344 EFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASSSFHRYAK 403
Query: 785 -----------VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHS 833
+++TT+ + L+ +W + ++DEGH+++N S++S++ +
Sbjct: 404 NLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQI-RT 462
Query: 834 DYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEET 893
R+IL+GTP+QNNL ELW L +FV P ++ F F P N GG + + +T
Sbjct: 463 VNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPI-NIGGYANASNVQVQT 521
Query: 894 LLVIR-RLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIF 952
L ++ P+LLRR+K DV DLP K E+VL CK++ LQ K YQ L+
Sbjct: 522 AYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQDFLQ------- 574
Query: 953 DDSSNQKF-SSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLE 1011
S QK + R I LRKICNHP + + + + N +GK +++
Sbjct: 575 -GSDMQKILNGKRQMLYGIDILRKICNHPDLV--TREYLLHKEDYNYGDPEKSGKLKVIR 631
Query: 1012 RILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL-DMKYLRLDGHTKSDDRTALLNTFNAP 1070
+L +K GHR L+F Q Q++DI+E L+ L D+ Y R+DG T R L++ FN
Sbjct: 632 ALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVDNFN-- 689
Query: 1071 NSDYF-CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 1129
++YF FLL+TR GGLG+NL AD VI+FD DWNP D QA++RA R+GQK +V + RL
Sbjct: 690 KNEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRL 749
Query: 1130 ITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
+T ++EE I + K + K+++ K
Sbjct: 750 MTAGTIEEKIYHRQIFKQFLTNKILKDPK 778
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 263 bits (671), Expect = 2e-69
Identities = 183/570 (32%), Positives = 293/570 (51%), Gaps = 58/570 (10%)
Query: 624 TKDKIESHLDTQELSED-NVGDKNGADSDDDLERER-IDYYEVAHSIKEEVKQQPSILVG 681
+K+ I+ D E D V D A + + R I+ E + IK+E K+ V
Sbjct: 85 SKESIDFEWDGAEDDRDIKVFDAKRAKAVEKYCRHMGIEEDEFSEHIKKEGKECEGFSVP 144
Query: 682 G----TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFL 737
G +L YQ G++WM+ L+ + G+LAD+MGLGKTIQ I L L ++ V L
Sbjct: 145 GFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVV-SKAL 203
Query: 738 VIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKER 797
++ P + ++ W E+ ++ P +R F G P E L+ +F + F
Sbjct: 204 ILCPATIVSQWMDEWKRFYPFVR--IFFGFPNEDCEGVYLMSYEKFKAGVKNF------- 254
Query: 798 PLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNF 857
W I+DEGHR+KN ++++L++ S R +L+GTP+QNNL ELW++ +F
Sbjct: 255 ------LWDVLILDEGHRIKNKNAQITLSVKKA-RSRGRFVLSGTPIQNNLGELWSIFDF 307
Query: 858 VLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVE 917
V P + S SF+E F G ++ L E+ L ++ P++LRR K V
Sbjct: 308 VNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEPYILRRTKSQVS 367
Query: 918 KDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKIC 977
LP K +K++ C ++ Q +LY ++L+ + + + + + I LRK+C
Sbjct: 368 HKLPSKEDKIVFCSLTPAQIELYNRVLESKHIM-------KVLTGKANLLSGISMLRKVC 420
Query: 978 NHPFVF------------EEVEDQIN--------PARETNDTIWRSAGKFELLERILPKF 1017
NHP + EE D+ N P + + + S+ K ++L +L K+
Sbjct: 421 NHPRLLFPRKLGVSEDCEEEASDEKNGEDEALELPGADVSYDLVSSSCKIKILVDLLKKW 480
Query: 1018 KATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCF 1077
++ G++VL+F Q +++DI+E +R YLR+DG T + R L++ FN + D F F
Sbjct: 481 RSEGNKVLVFSQTIRMLDIIERCVR--KYTYLRMDGRTPTSSRPGLVDRFN-EDEDVFLF 537
Query: 1078 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
LL+T+ GGLGLNL A ++I+D DWNP D QA++RA R GQK V I R + +++EE
Sbjct: 538 LLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEE 597
Query: 1138 AILDKAHAKLDIDGKVI----QAGKFDNKS 1163
+ K K D+ GK + + +F NKS
Sbjct: 598 KVYQKQIFK-DLLGKKVLSNPRLSRFFNKS 626
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 261 bits (666), Expect = 8e-69
Identities = 153/371 (41%), Positives = 216/371 (57%), Gaps = 24/371 (6%)
Query: 626 DKIESHLDTQELSEDNVGDKN--GADSDDDLERERIDYYEVAHSIKE--------EVKQQ 675
D E LD + SE+ G + D+D D + D A S + +V+ +
Sbjct: 53 DLTECKLDPEPCSENVEGTFHEVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTK 112
Query: 676 PSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGP 735
L+ +L+EYQ GL W+V+++ LNGILADEMGLGKTI TI+LL +L KG+ GP
Sbjct: 113 LPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGP 172
Query: 736 FLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPK-QALIKNREFDVVLTTFEYII 794
L++VP S + NW EF KW P + + + G ERK K Q +K F V +TT+ +I
Sbjct: 173 HLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVI 232
Query: 795 KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWAL 854
++ + + KW + I+DE H +KN +S+ TL ++S R++LTGTPLQN+L ELW+L
Sbjct: 233 QDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSL 291
Query: 855 LNFVLPKIFNSVKSFDEWFNTPFAN-TGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLK 913
++F++P +F S + F +WF P A GQ+KI VI RLH VLRPFLLRRLK
Sbjct: 292 MHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKE------VIDRLHNVLRPFLLRRLK 345
Query: 914 KDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQL 973
+DVEK LP K E V+ C++S Q LY+ + + + S G + IMQL
Sbjct: 346 RDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIAST-----ETQATLTSGSFFGMISIIMQL 400
Query: 974 RKICNHPFVFE 984
RK+CNHP +FE
Sbjct: 401 RKVCNHPDLFE 411
Score = 158 bits (399), Expect = 7e-38
Identities = 79/158 (50%), Positives = 108/158 (68%), Gaps = 1/158 (0%)
Query: 1005 GKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALL 1064
GK + L +L K K GHR LIF QMT+++D++E F+ Y+RLDG T ++R L+
Sbjct: 660 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 719
Query: 1065 NTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1124
FN N F F+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 720 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 778
Query: 1125 RILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNK 1162
I RLI+++++EE IL KA+ K +D VIQ G+++ +
Sbjct: 779 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTE 816
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 259 bits (661), Expect = 3e-68
Identities = 166/453 (36%), Positives = 245/453 (53%), Gaps = 47/453 (10%)
Query: 558 TNLEKEELKRIE-RNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKA 616
T + EE+KR + K R +A N+E+ I D+ K + H+L L +
Sbjct: 456 TQEDLEEMKREKLEEQKARKEACGDNEEKMEI---DELKSQILLHIL--VVLLLSESPSS 510
Query: 617 VKDQQSFTKDKIESHLDTQELSEDNVGDKNGA---------DSDDDLERERIDYYEVAHS 667
+ S + + + +ED GD +G +S D ER++ E+A+
Sbjct: 511 DAQKPSTSSSDLTAEQLQDPTAEDGNGDGHGVLENVDYVKLNSQDSDERQQ----ELANI 566
Query: 668 IKEEVKQQPS--------------ILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGL 713
+E +K QP L+ G L+EYQ+ GL WMV+L+ +LNGILADEMGL
Sbjct: 567 AEEALKFQPKGYTLETTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGL 626
Query: 714 GKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP 773
GKTIQTISLL ++ ++ + GP L++VP S + NW EF KW P L+ + + G ER
Sbjct: 627 GKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAE 686
Query: 774 K-QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQS-KLSLTLNTYY 831
K + +K F V +T+++ + ++ + W + I+DE +KN +S + LN
Sbjct: 687 KRKGWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNV-- 744
Query: 832 HSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEE 891
+ RL+LTGTPLQN+L ELW+L++F++P IF+S F +WF+ P TG + + E
Sbjct: 745 RARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPL--TGMMEG---NME 799
Query: 892 ETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFI 951
+I RLHKVLRPF+LRRLKK+VEK LP+K E ++ C +S Q LY + R
Sbjct: 800 FNAPLIGRLHKVLRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRR---- 855
Query: 952 FDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFE 984
N K + N +MQLRK CNHP +FE
Sbjct: 856 -STKENLKSGNMMSVLNIVMQLRKCCNHPNLFE 887
Score = 138 bits (348), Expect = 6e-32
Identities = 70/142 (49%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Query: 1005 GKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALL 1064
GK + L +L + HR LIF QM++++D+++ FL + +Y RLDG T + R A++
Sbjct: 1239 GKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMM 1298
Query: 1065 NTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1124
FNA + FCF+LSTR+GG+G+NL ADTVI +D+DWNP D QAQDR HRIGQ V
Sbjct: 1299 ERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNV 1357
Query: 1125 RILRLITDNSVEEAILDKAHAK 1146
I RLI++ ++EE IL KA K
Sbjct: 1358 SIYRLISERTIEENILRKATQK 1379
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 257 bits (656), Expect = 1e-67
Identities = 171/524 (32%), Positives = 276/524 (52%), Gaps = 55/524 (10%)
Query: 680 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLT---------YLYE-- 728
+ L++YQ G+ W+ L L+GIL D+MGLGKT+Q+I +L Y
Sbjct: 1262 INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKL 1321
Query: 729 AKGVHGPFLVIVPLSTLTNWNAEFDKWAPK--LRKIAFKGPPMERKPKQALIKNREFDVV 786
A+ + P LV+ P + +W E K+ + L + + GPP ER Q +K +++
Sbjct: 1322 AECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRH--NLI 1379
Query: 787 LTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQN 846
+ +++ + + IK+ + I+DEGH +KN ++KLS + ++YR+IL+GTP+QN
Sbjct: 1380 VASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLT-ANYRIILSGTPIQN 1438
Query: 847 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRP 906
N+ ELW+L +F++P + + F + P + + +E +L + LH+ + P
Sbjct: 1439 NVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLP 1498
Query: 907 FLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHR----------RLFIFDDSS 956
FLLRR+K+DV +DLP K+ + C +S LQ +LY+ K R + +++
Sbjct: 1499 FLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEETE 1558
Query: 957 NQKFSSSRGFNNQIMQLRKICNHPFV--------FEEVEDQINPARETNDTIWRSAGKFE 1008
K ++ + LRK+CNHP + F+ +++ + I + A K
Sbjct: 1559 KPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDI-QHAPKLS 1617
Query: 1009 LLERIL--------------PKFKATGHRVLIFFQMTQVMDIME-DFLR--YLDMKYLRL 1051
L+++L + HR+LIF Q+ ++DI+E D L+ + YLRL
Sbjct: 1618 ALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRL 1677
Query: 1052 DGHTKSDDRTALLNTF-NAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 1110
DG R ++++ F N P+ D LL+T GGLGLNL ADTV+ + DWNP +DLQ
Sbjct: 1678 DGSIPPGQRHSIVSRFNNDPSID--VLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQ 1735
Query: 1111 AQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
A DRAHRIGQK V + RLIT ++EE I+ K++I VI
Sbjct: 1736 AMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVI 1779
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 251 bits (642), Expect = 5e-66
Identities = 164/453 (36%), Positives = 248/453 (54%), Gaps = 51/453 (11%)
Query: 555 NLHTNLEKEELKRIERNAKQR-----LQALKANDEEAYIKL-LDQTKDTRITHLLKQTNT 608
+++++ E E +R + + L AL EE+ L LD ++D + ++
Sbjct: 576 SIYSSSENESQNENDRESDDKTPSVGLSALFGKGEESDGDLDLDDSEDFTVN----SSSV 631
Query: 609 FLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSI 668
+ L K D + T ++ + TQ + D++ D D++ ++ E++ +V
Sbjct: 632 EGEELEKDQVDNSAATFERAGDFVHTQNENRDDIKDVE-EDAETKVQEEQLSVVDVP--- 687
Query: 669 KEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYE 728
PS+L G L+ YQ +GL W+ SL+NNH NGILADEMGLGKTIQTISLL YL
Sbjct: 688 ------VPSLL-RGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLAC 740
Query: 729 AKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPK-QALIKNREFDVVL 787
K GP L++VP S L NW EF ++AP + + + G P +RK K + K F V +
Sbjct: 741 EKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCI 800
Query: 788 TTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQS-KLSLTLNTYYHSDYRLILTGTPLQN 846
+++ +++++ + +W + ++DE H +KN +S + LN +++ RL+LTGTPLQN
Sbjct: 801 VSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLN--FNTQRRLLLTGTPLQN 858
Query: 847 NLPELWALLNFVLPKI---------FNSVKSFDEWFNTP---FANTG---GQDKIALSEE 891
NL ELW+LL F++P+ F + +F +WF P TG GQDK
Sbjct: 859 NLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDK------ 912
Query: 892 ETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFI 951
ET + +LH+VLRP+LLRRLK DVEK +P K E ++ CK+S Q LY + +
Sbjct: 913 ETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTKA 972
Query: 952 FDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFE 984
S N F S N +MQLRK+CNHP +FE
Sbjct: 973 TLASGN--FMS---IVNCLMQLRKVCNHPNLFE 1000
Score = 156 bits (395), Expect = 2e-37
Identities = 83/198 (41%), Positives = 118/198 (58%), Gaps = 1/198 (0%)
Query: 962 SSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATG 1021
SS G N ++ ++ +++ ++ A + GK + L +L + K G
Sbjct: 1203 SSVGENTRLKVMQNCFEVSNPLHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNG 1262
Query: 1022 HRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLST 1081
HR LIF QMT+V+D++E FL Y Y+RLDG TK +DR L FN +S F+LS+
Sbjct: 1263 HRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNT-DSRITVFILSS 1321
Query: 1082 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILD 1141
R+GGLG+NL ADTVI +D+DWNP D Q QDR HRIGQ +V I R ++++++E IL
Sbjct: 1322 RSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILK 1381
Query: 1142 KAHAKLDIDGKVIQAGKF 1159
KA+ K +D VIQ G F
Sbjct: 1382 KANQKRQLDNVVIQEGDF 1399
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 249 bits (637), Expect = 2e-65
Identities = 147/422 (34%), Positives = 234/422 (54%), Gaps = 19/422 (4%)
Query: 577 QALKANDEEAYIKLLDQTKDTRITHLLKQTNTFL-DSLTKAVKDQQSFTKDKIESHLDTQ 635
+AL DE ++L +T + + L + + +A +D S K +I DT+
Sbjct: 479 EALPIGDENPIDEVLPETSAAEPSEVEDPEEAELKEKVLRAAQDAVSKQK-QITDAFDTE 537
Query: 636 ELSEDNVGDKNGADSDDDLE-RERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQW 694
+ + G +D + ID + + Q P L GTLKEYQ+KGLQW
Sbjct: 538 YMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPE-LFKGTLKEYQMKGLQW 596
Query: 695 MVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDK 754
+V+ + LNGILADEMGLGKTIQ ++ L +L E K + GPFLV+ P S L NW E +
Sbjct: 597 LVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISR 656
Query: 755 WAPKLRKIAFKGPPMER-------KPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVH 807
+ P L+ + + G ER PK+ ++ F +++T+++ ++ + ++KW +
Sbjct: 657 FCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQY 716
Query: 808 TIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVK 867
++DE +K++ S TL + ++ RL+LTGTP+QNN+ ELWALL+F++P +F++
Sbjct: 717 MVLDEAQAIKSSSSIRWKTLLS-FNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHD 775
Query: 868 SFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKV 927
F+EWF+ N + L+E + + RLH +L+PF+LRR+KKDV +L K E
Sbjct: 776 QFNEWFSKGIEN-HAEHGGTLNEHQ----LNRLHAILKPFMLRRVKKDVVSELTTKTEVT 830
Query: 928 LKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFN--NQIMQLRKICNHPFVFEE 985
+ CK+S+ Q YQ + L DS+ +F+ + N N ++QLRK+CNHP +FE
Sbjct: 831 VHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFER 890
Query: 986 VE 987
E
Sbjct: 891 NE 892
Score = 137 bits (346), Expect = 1e-31
Identities = 73/154 (47%), Positives = 99/154 (63%), Gaps = 10/154 (6%)
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTAL 1063
+GK + L+ +L + +A HRVL+F QMT++++I+ED++ Y KYLRLDG + DR +
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1264
Query: 1064 LNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1123
+ F SD F FLLSTRAGGLG+NL ADTVI +++DWNP DLQA DRAHR+GQ
Sbjct: 1265 VRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTK- 1322
Query: 1124 VRILRLITDNSVEEAILDKAHAKLDIDGKVIQAG 1157
D +VEE IL +A K + V+ G
Sbjct: 1323 --------DETVEEKILHRASQKNTVQQLVMTGG 1348
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 249 bits (636), Expect = 2e-65
Identities = 133/317 (41%), Positives = 196/317 (60%), Gaps = 16/317 (5%)
Query: 671 EVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAK 730
+VK +L+ G L+EYQ GL W+V+++ LNGILADEMGLGKTIQTISLL +L K
Sbjct: 408 QVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEK 467
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPK-QALIKNREFDVVLTT 789
G GP L+IVP S + NW E +W P + + + G ERK K Q K F V +T+
Sbjct: 468 GNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITS 527
Query: 790 FEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLP 849
++ ++++ + W + I+DE +KN +S+ +L ++S RL+LTGTPLQN+L
Sbjct: 528 YKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSL-LNFNSQRRLLLTGTPLQNSLM 586
Query: 850 ELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLL 909
ELW+L++F++P +F S + F EWF+ P I S+E +++RLHKVLRPFLL
Sbjct: 587 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG-----MIEGSQEYNEGLVKRLHKVLRPFLL 641
Query: 910 RRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFN-- 967
RR+K DVEK +P K E V++C++S Q LY F+ ++ + ++ +
Sbjct: 642 RRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDD-------FMAQTTTKETLATGHFMSVI 694
Query: 968 NQIMQLRKICNHPFVFE 984
N +MQLRK+CNHP +F+
Sbjct: 695 NILMQLRKVCNHPNLFD 711
Score = 163 bits (413), Expect = 2e-39
Identities = 82/155 (52%), Positives = 108/155 (68%), Gaps = 1/155 (0%)
Query: 1005 GKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALL 1064
GK + L +L + KA GHRVLIF QMT+++D++E FL Y YLRLDG T+ + R AL+
Sbjct: 1784 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 1843
Query: 1065 NTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1124
FNA + FCF+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 1844 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 1902
Query: 1125 RILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKF 1159
I RLI++ +VEE IL KA+ K + I+ G F
Sbjct: 1903 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 1937
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 246 bits (628), Expect = 2e-64
Identities = 165/504 (32%), Positives = 269/504 (52%), Gaps = 75/504 (14%)
Query: 546 RVKLGHR-LINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLK 604
R + G R + N E+EE ++ K+ ++ K +EE K Q K ++ LL
Sbjct: 531 RARRGIREMSNFWKKNEREERDLKKKIEKEAMEQAKKEEEEKESKR--QAK--KLNFLLT 586
Query: 605 QTNTFLDSLTKAVKDQQ------SFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERE- 657
QT + + + +K + S + + ++D L+ N D + D D++ + +
Sbjct: 587 QTELYSHFIGRKIKTNELEGNNVSSNDSESQKNIDISALAP-NKNDFHAIDFDNENDEQL 645
Query: 658 --------------------RIDYYEVAHSIKEEVKQ---------------QPSILVGG 682
+ D + AH +EE + QP IL
Sbjct: 646 RLRAAENASNALAETRAKAKQFDDHANAHEEEEEEDELNFQNPTSLGEITIEQPKILAC- 704
Query: 683 TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPL 742
TLKEYQLKGL W+ +L++ +NGILADEMGLGKT+Q+IS+L +L E + GPFLV+ P
Sbjct: 705 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPA 764
Query: 743 STLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQAL--------IKNREFDVVLTTFEYII 794
STL NW E K+ P+ + + + G +RK + KN F V++T+++ ++
Sbjct: 765 STLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVV 824
Query: 795 KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWAL 854
+ L K+KW + I+DE +K++QS L + +H RL+LTGTP+QN++ ELWAL
Sbjct: 825 TDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLS-FHCRNRLLLTGTPIQNSMQELWAL 883
Query: 855 LNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKK 914
L+F++P +F+S F+EWF+ + + L++++ +RRLH +L+PF+LRR+KK
Sbjct: 884 LHFIMPSLFDSHDEFNEWFSKDI-ESHAEANTKLNQQQ----LRRLHMILKPFMLRRVKK 938
Query: 915 DVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFD--------DSSNQKFSSS--- 963
+V+ +L DK+E + C ++ Q KLY Q+LK + +D DS++ S+S
Sbjct: 939 NVQSELGDKIEIDVLCDLTQRQAKLY-QVLKSQISTNYDAIENAATNDSTSNSASNSGSD 997
Query: 964 RGFNNQIMQLRKICNHPFVFEEVE 987
+ N +MQ RK+CNHP +FE +
Sbjct: 998 QNLINAVMQFRKVCNHPDLFERAD 1021
Score = 154 bits (390), Expect = 8e-37
Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Query: 991 NPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLR 1050
N + + D + K L+ +L K K+ GHRVLI+FQMT++MD+ME++L Y ++R
Sbjct: 1285 NISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIR 1344
Query: 1051 LDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 1110
LDG +K +DR L++ + N + F FLLSTRAGGLG+NL ADTVI +D+DWNP D Q
Sbjct: 1345 LDGSSKLEDRRDLVHDWQT-NPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQ 1403
Query: 1111 AQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKS 1163
A DRAHR+GQ +V + RL+ ++EE + D+A K + +V+ GK K+
Sbjct: 1404 AMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQ-QVVMEGKTQEKN 1455
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 234 bits (598), Expect = 6e-61
Identities = 170/563 (30%), Positives = 275/563 (48%), Gaps = 77/563 (13%)
Query: 654 LERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGL 713
L+ ID Y++ +K + L+ YQ +G+ W+ L L+GIL D+MGL
Sbjct: 1426 LDNSHIDDYKLCTELKVQ------------LRRYQQEGINWLGFLKRFKLHGILCDDMGL 1473
Query: 714 GKTIQTISLLTY-LYEAKGVHG-----PFLVIVPLSTLTNWNAEFDKWAPK--LRKIAFK 765
GKT+Q +++ E +G P +++ P + + +W E +K+ L + +
Sbjct: 1474 GKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYV 1533
Query: 766 GPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSL 825
G +R + N +V++T+++ + K+ L++ W + I+DEGH +KNA+SK++
Sbjct: 1534 GSAQDRVSLREQFNNH--NVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITA 1591
Query: 826 TLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDK 885
+ + +RLIL+GTP+QNN+ ELW+L +F++P + + F + P
Sbjct: 1592 AVKQL-KAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKC 1650
Query: 886 IALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQM-- 943
A E +L + LHK + PFLLRR K++V DLP+K+ + C +S +Q KLY+Q
Sbjct: 1651 SAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSG 1710
Query: 944 --LKHRRLFIFD-----DSSNQKFSSSRGFNN---QIMQLRKICNHPF----------VF 983
K I DS N + ++ + + L K+C+HP V
Sbjct: 1711 SSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVA 1770
Query: 984 EEVEDQINPARETNDTIWR--SAGKFELLERILPK-------------FKATGHRVLIFF 1028
++ IN + + + + K L+ IL + HRVLIF
Sbjct: 1771 SDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFA 1830
Query: 1029 QMTQVMDIMEDFLRYLDMK---YLRLDGHTKSDDRTALLNTFNA-PNSDYFCFLLSTRAG 1084
Q ++DI+E L MK Y+RLDG + R ++ FN+ P D LL+T G
Sbjct: 1831 QHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTID--VLLLTTHVG 1888
Query: 1085 GLGLNLQTADTVIIFDTDWNPHQD-----------LQAQDRAHRIGQKNEVRILRLITDN 1133
GLGLNL +ADT++ + DWNP +D QA DRAHR+GQK V + RLI
Sbjct: 1889 GLGLNLTSADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVNVHRLIMRG 1948
Query: 1134 SVEEAILDKAHAKLDIDGKVIQA 1156
++EE ++ K+ + VI A
Sbjct: 1949 TLEEKVMSLQKFKVSVANTVINA 1971
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 231 bits (588), Expect = 9e-60
Identities = 167/520 (32%), Positives = 273/520 (52%), Gaps = 63/520 (12%)
Query: 684 LKEYQLKGLQWMVSL-----FNNHLNGILADEMGLGKTIQTISLLTYL-----YEAKGVH 733
L+ +Q +G+ ++ N ILADEMGLGKT+Q ISL+ L Y K V
Sbjct: 194 LRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVI 253
Query: 734 GPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPK-QALIKNREFDVVLTTFEY 792
L++ P S + NW EF KW R F +++ K + IK+ + V++ ++E
Sbjct: 254 KKTLIVTPGSLVNNWKKEFQKWLGSERIKIFT---VDQDHKVEEFIKSIFYSVLIISYEM 310
Query: 793 IIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELW 852
+++ + IK+ I DEGHR+KN+ K + L + + R+ILTGTP+QN+L E +
Sbjct: 311 LLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISL-SCEKRIILTGTPIQNDLQEFF 369
Query: 853 ALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRR---LHKVLRPFLL 909
AL++FV P I S+ S+ + + P + + + SEEE L RR L + F+L
Sbjct: 370 ALIDFVNPGILGSLSSYRKIYEEPIILSR---EPSASEEEKELGERRAAELTCLTGLFIL 426
Query: 910 RRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQ 969
RR ++ + K LP K+E V+ C+ ALQ +LY+++L +S +F N
Sbjct: 427 RRTQEIINKYLPPKIENVVFCRPGALQIELYRKLL---------NSQVVRFCLQGLLENS 477
Query: 970 -----IMQLRKICNHP-FVFEEVEDQ--------------------INPARETNDTIW-- 1001
I L+K+CNHP +F ++++ + PA + N ++
Sbjct: 478 PHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPA-DYNPLLFTE 536
Query: 1002 RSAGKFELLERILP---KFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSD 1058
+ +GK ++L ++L + + T +V++ TQ ++I+++ + Y RLDG T
Sbjct: 537 KESGKLQVLSKLLAVIHELRPT-EKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPIS 595
Query: 1059 DRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1118
R +++ FN+ +S +F FLLS++AGG+GLNL +I++D DWNP D+QA R R
Sbjct: 596 QRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRD 655
Query: 1119 GQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
GQK V I RL+T ++EE I + +K + G V+ K
Sbjct: 656 GQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTK 695
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 228 bits (581), Expect = 6e-59
Identities = 157/504 (31%), Positives = 258/504 (51%), Gaps = 40/504 (7%)
Query: 680 VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVH------ 733
V L ++Q +G++W+ ++ GILADEMGLGKTIQ++ L + E H
Sbjct: 190 VWNKLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSVVFLRSIQETARTHYKTTGL 249
Query: 734 GPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGP-----------PMERKPKQALIKNRE 782
L++ +S + W E ++W PK R + RK ++ + +
Sbjct: 250 DTALIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQRRRKEYPD 309
Query: 783 FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGT 842
++LTT+ K + + K W I+DEGH ++N +K S+ + + R ILTGT
Sbjct: 310 GAIILTTYSLFTKLKKPIVKHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQ-RFILTGT 368
Query: 843 PLQNNLPELWALLNFVLPKIFNSVKSFDEWFN---TPFANTGGQDKIALSEEETLLVIRR 899
P QN L E W L++FV P + +F F AN + A E L+
Sbjct: 369 PFQNRLSEFWKLVDFVHPGRLSDSATFHRNFTHIINAGANLNCSPEAAAKAYECLVA--- 425
Query: 900 LHKVLRPFLLRRLKKDVEK--DLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSN 957
LH ++P +LRRL++D ++ LP+K E VL C++S Q +LY + ++ ++
Sbjct: 426 LHIAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYMEYGNSHQV---NEIIE 482
Query: 958 QKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPK- 1016
++ + G N+ L ICNHP ++ ++PA +I + +GK E+ ++
Sbjct: 483 RRLKAFVGINH----LTNICNHPGIYRS----LSPASPKFGSI-KDSGKVEMTFKLFDDW 533
Query: 1017 FKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFC 1076
FK+ +RV++F Q V+ +ME FL +K + L G + R ++ F S
Sbjct: 534 FKSPTNRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVS-IKV 592
Query: 1077 FLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVE 1136
FL++TRAGGLGLNL A+ VIIFD DWNP D QA++R +R+GQ N+V I RL+++ ++E
Sbjct: 593 FLMTTRAGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIE 652
Query: 1137 EAILDKAHAKLDIDGKVIQAGKFD 1160
+ K K ++ +++ + D
Sbjct: 653 DLKFFKQVQKENLAARLLHNAEID 676
Score = 94.0 bits (232), Expect = 2e-18
Identities = 90/395 (22%), Positives = 171/395 (42%), Gaps = 25/395 (6%)
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
V+LTTF K + +W +D+G Q + + + R I T T +
Sbjct: 1158 VLLTTFAEFGKHEKAIVDHQWQLVYLDQGLFEMTRQMRNQIEGMKKLKTPNRFIFTDTSV 1217
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
++ L ELW ++FV P + K+F F D I LH L
Sbjct: 1218 RDRLEELWWNVDFVFPGRLSDYKTFQTNFQNVIEIGCRLDATPEEASTAYECIVALHVAL 1277
Query: 905 RPFLLRRL---------KKDVEKDLPDKVEKVLKCKMSALQHKLYQQML-----KHRRLF 950
+P +L RL ++++ K + ++ + K Q +Q ++ + RR
Sbjct: 1278 KPLILSRLIKNPNDWFCRREISKKEVEHIKVRIFVKQYFEQTLFFQDIICPLSKRQRRCL 1337
Query: 951 IFDDSSNQKFSSSRGFNNQIMQLRK---ICNHPFVFEEVEDQINPARETNDTIWRSAGKF 1007
S++ R + + L+K IC+HP + + V + D+ GK
Sbjct: 1338 KIYKRSDEVQGILRQSSAACVGLKKLTDICDHPGIHKGVTPETKKFGSIEDS-----GKV 1392
Query: 1008 ELLERILPKFKAT-GHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNT 1066
++ ++L + T G +V+IF Q QV ++E F++ + Y + DR ++N
Sbjct: 1393 RIVFQLLDMWLGTPGAKVVIFTQRRQVAVMLEHFMKQKRIAYCSFLKAKNAYDRENVVNY 1452
Query: 1067 FNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ-AQDRAHRIGQKNEVR 1125
F +D L + LG+ L+ A+ VIIFD +WNP D++ ++ + + +V
Sbjct: 1453 FEN-TTDVQILLAPSIMFKLGMQLKKANKVIIFDPEWNPDSDVKHTREMSFLTKKVEDVT 1511
Query: 1126 ILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
++RL+++ +VE++ K + + +++ KF+
Sbjct: 1512 VVRLVSEGTVEDSSYFKKLWESGLASRLLSDPKFE 1546
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 224 bits (572), Expect = 6e-58
Identities = 186/610 (30%), Positives = 295/610 (47%), Gaps = 63/610 (10%)
Query: 598 RITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERE 657
R + KQTN + +T K Q+ K D ++ V +KN A D +
Sbjct: 234 RFKSVTKQTN---EHMTTVPKTSQNSKAKKYYPVFDVNKIDNPIVMNKNAAAEVDVIVDP 290
Query: 658 RIDYYEVAHSIKEEVKQQPSILVG---GTLKEYQLKGLQWMVSLFNNH-LNG-ILADEMG 712
+ + H +E VK L+G T++ + + L N+ ++G +LAD+MG
Sbjct: 291 LLGKFLRPHQ-REGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMG 349
Query: 713 LGKTIQTISLLTYLYEAK----------------GVHGPFLVIVPLSTLTNWNAEFDKWA 756
LGKT+ +I+L+ L G+ LV+ P++ + NW EF KW
Sbjct: 350 LGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWL 409
Query: 757 PKLRKIAF------KGPPMERKPKQALIK-NREFDVVLTTFEYIIKERPLLSKIKWVHTI 809
L +I P M++ + +K R + V++ +E ++ L K K + +
Sbjct: 410 -NLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDM 468
Query: 810 I--DEGHRMKNAQSKLSLTLNTYYHSDYR--LILTGTPLQNNLPELWALLNFVLPKIFNS 865
+ DEGHR+KN SK+ LNT D R L+LTGTP+QN+L E + +++F+ P I S
Sbjct: 469 LVCDEGHRLKNGASKI---LNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGS 525
Query: 866 VKSFDEWFNTPF------ANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKD 919
SF F P AN ++ + EE + + + ++ + F+LRR +EK
Sbjct: 526 FASFKRRFIIPITRARDTANRYNEELLEKGEERS----KEMIEITKRFILRRTNAILEKY 581
Query: 920 LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNH 979
LP K + +L CK + Q ++ +L+ RL D FSSS G I L+K+CN
Sbjct: 582 LPPKTDIILFCKPYSQQILAFKDILQGARL----DFGQLTFSSSLGL---ITLLKKVCNS 634
Query: 980 PFVFEEVEDQINPARETN--DTIWRS--AGKFELLERILPKF-KATGHRVLIFFQMTQVM 1034
P + + ++T D+ RS +GK ++L +L K T +V++ TQ +
Sbjct: 635 PGLVGSDPYYKSHIKDTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTL 694
Query: 1035 DIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTAD 1094
DI+E+ + M + RLDG + R +++ +FN N F FLLS ++GG+GLNL
Sbjct: 695 DIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNR-NPAIFGFLLSAKSGGVGLNLVGRS 753
Query: 1095 TVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
+I+FD DWNP DLQA R HR GQK I RL+T ++E IL + K + K +
Sbjct: 754 RLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFL 813
Query: 1155 QAGKFDNKST 1164
+ NK +
Sbjct: 814 GDSEMRNKES 823
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 221 bits (562), Expect = 9e-57
Identities = 145/486 (29%), Positives = 248/486 (50%), Gaps = 52/486 (10%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L++YQ++G++W+ L++ LNGILAD+MGLGKT+Q ++ L E + LVI P S
Sbjct: 797 LRDYQMEGVKWLNFLYSFSLNGILADDMGLGKTLQVLTFL--CSEIYKTNRKVLVICPSS 854
Query: 744 TLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKI 803
+W +E K+ P + +K + + ++++++E + +
Sbjct: 855 LTGHWKSEVKKFFPFVAAEIYKREDRD-----------TYSILISSYETFRNDYLNFIEK 903
Query: 804 KWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIF 863
W + ++DEGH ++N Q+ L +N +++LTGTP+ N++ +L +L NF++P
Sbjct: 904 DWFYVVVDEGHVLRNKQTILYSRMN-MIRCSRKMVLTGTPVHNSVEDLISLFNFLMPNYI 962
Query: 864 NSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRR---LHKVLRPFLLRRLKKDVEKDL 920
K + G + +S+ E +R LH+ + PF+LRRLK DV KDL
Sbjct: 963 GPEKEY------------GSLNVKMSDSEIEKTHKRLDLLHRKVLPFILRRLKIDVLKDL 1010
Query: 921 PDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHP 980
P K+ + + ++ +Q KLY+++ D+ ++ + ++ K+
Sbjct: 1011 PPKIIRDITVELGPVQEKLYREI---------DEKGGKE-----SLGDAELEYGKVDQKN 1056
Query: 981 FVFEEVED---QINPARETNDTIWRSAGKFELLERILPKF--KATGHRVLIFFQMTQVMD 1035
F+ D ++ D+ S K + LE I+ + G ++LIFFQ +D
Sbjct: 1057 VGFKRTRDLFLAVSHIGHFKDSTEVSC-KVKALEDIISLCGGEDLGSKILIFFQFKSTID 1115
Query: 1036 -IMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTAD 1094
+++D ++ KY RLDG S RT + FN + L+T+ GGLGLNL AD
Sbjct: 1116 LVIKDIMKKYKFKYSRLDGSVPSAARTKIAEEFNTGTTQ--MLFLTTQVGGLGLNLTGAD 1173
Query: 1095 TVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
TV++++ DWNP DLQA DRAHRIGQK V + R I N++EE +++ K+ + ++
Sbjct: 1174 TVVMYEHDWNPFNDLQAMDRAHRIGQKRTVNVFRFIARNTLEEKVMNLQSFKMFVANSLV 1233
Query: 1155 QAGKFD 1160
D
Sbjct: 1234 SQQNAD 1239
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 218 bits (555), Expect = 6e-56
Identities = 170/590 (28%), Positives = 274/590 (45%), Gaps = 76/590 (12%)
Query: 633 DTQELSEDNVGDKNGADSDDDLERERI-----DYYEVAHSIKEEVKQQPSILVGGTL--- 684
D+ + +D+ D G + + + E + D + ++K+ + +I+V L
Sbjct: 16 DSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLLSNVTTIMVHSVLVKF 75
Query: 685 -KEYQLKGLQWMVSLFNN-----HLNG-ILADEMGLGKTIQTISLLTYLYEAKGVHGP-- 735
+ +Q +G+Q+M + ++NG ILAD+MGLGKT+Q+I+LL Y +G G
Sbjct: 76 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLL-YTLLCQGFDGTPM 134
Query: 736 ---FLVIVPLSTLTNWNAEFDKWA----------PKLRKIAFKGPPMERKPKQALIKNRE 782
+++ P S ++NW AE KW R G +P+ AL
Sbjct: 135 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSAL----- 189
Query: 783 FDVVLTTFEYIIKERPLLSKIKWVHTII-DEGHRMKNAQSKLSLTLNTYYHSDYRLILTG 841
V++ ++E + + +I DE HR+KN Q+ + L + R++L+G
Sbjct: 190 -QVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLT-CKRRVLLSG 247
Query: 842 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIR--R 899
TP+QN+L E +A++NF P F ++ P G++ A EE+ L R
Sbjct: 248 TPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIIC--GREPTATEEEKNLAADRSAE 305
Query: 900 LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRL--FIFDDSSN 957
L + F+LRR + LP K+ +V+ CKM+ LQ LY + + L + D++
Sbjct: 306 LSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQ 365
Query: 958 QKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINP----------------------ARE 995
K + I L+K+CNHP + + NP A
Sbjct: 366 TKVLA------YITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWT 419
Query: 996 TNDTIW-RSAGKFELLERILPKFKA-TGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDG 1053
D W +GK +L R+L + T R+++ TQ +D+ R +LRLDG
Sbjct: 420 GGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDG 479
Query: 1054 HTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 1113
T R L+N N P D F FLLS++AGG GLNL A+ +++FD DWNP D QA
Sbjct: 480 STTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAA 539
Query: 1114 RAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKS 1163
R R GQK V + R ++ ++EE + + +K + KVIQ + DN +
Sbjct: 540 RVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQHEQTDNST 588
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 216 bits (550), Expect = 2e-55
Identities = 158/506 (31%), Positives = 252/506 (49%), Gaps = 37/506 (7%)
Query: 679 LVGGTLKEYQLKGLQWMVSLFNN---HLNG-ILADEMGLGKTIQTISLLTYLY----EAK 730
L+ L+ +Q +G+++M + NG I+ADEMGLGKT+Q ++L+ L E K
Sbjct: 151 LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECK 210
Query: 731 GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNRE-------- 782
+V+ P S + NW EF KW R + PME K+ I+ E
Sbjct: 211 PTINKAIVVSPSSLVKNWEKEFTKWLHG-RLLCL---PMEGGTKENTIRALEQFSMTSAR 266
Query: 783 --FDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILT 840
V+L ++E +L K + I DEGHR+KN+ + L+ + R++L+
Sbjct: 267 LGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDN-LTYQALMGLKTKRRVLLS 325
Query: 841 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRL 900
GTP+QN+L E ++L+NFV P++ + F F + D + + + L
Sbjct: 326 GTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQEL 385
Query: 901 HKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKF 960
++ ++RR + + K LP K E V+ K++A+Q +LY LK ++ N+K
Sbjct: 386 IGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKA 445
Query: 961 SSSRGFNNQIMQLRKICNHPFV-----------FEEVEDQINPARETNDTIWRSAGKFEL 1009
S + + I L+KIC+HP + FE ++ + + D +GKF L
Sbjct: 446 SLTALAD--ITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFML 503
Query: 1010 LERILPKFKATGH-RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFN 1068
L+ +L +A G+ +V++ TQ +D+ E R ++RLDG R+ +++ FN
Sbjct: 504 LDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFN 563
Query: 1069 APNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILR 1128
P SD F F+LS++AGG GLNL A+ + +FD DWNP D QA R R GQK I R
Sbjct: 564 DPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYR 623
Query: 1129 LITDNSVEEAILDKAHAKLDIDGKVI 1154
L+ S+EE IL + K + +I
Sbjct: 624 LVASGSIEEKILQRQTHKKSLSSTII 649
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 212 bits (540), Expect = 3e-54
Identities = 154/508 (30%), Positives = 259/508 (50%), Gaps = 55/508 (10%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQT---ISLLTYLYEAKGVHGPFLVIV 740
L+EYQL+G+ W+ L L+GILAD+MGLGKT+QT I+L E H L++
Sbjct: 982 LREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVDRDEMSEFHRCSLIVC 1041
Query: 741 PLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKP-KQALIKNREFDVVLTTFEYIIKERPL 799
P + + +W E++++ P +R P + L + ++ + ++ + K +
Sbjct: 1042 PRTLVDHWCLEWNRFFP------------QRVPASKNLTRCHGAEICVIAYDEL-KTAYM 1088
Query: 800 LSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVL 859
+ ++ W + ++DEGH M+N++ + + + RLIL+GTP+QN+ +LW+L +++
Sbjct: 1089 MDRV-WNYIVLDEGHVMRNSKLR-AWKFASQLVGKSRLILSGTPVQNSPADLWSLFAWLM 1146
Query: 860 PKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKD 919
P S K F F + I +LHK++ PF++RRLK +V K+
Sbjct: 1147 PGYLGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQLHKLVLPFVMRRLKTEVLKE 1206
Query: 920 LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNH 979
LP+K + +C+++ Q ++Y+ F+ D ++ + ++ LRK+ +H
Sbjct: 1207 LPEKNVQDYECELTEDQKEIYR--------FVVDRCTSSQEDVGLSSLVTLITLRKLTDH 1258
Query: 980 PFVFEEVEDQIN-PARETNDTIWRSAGKFELLERILPKFK-------------------A 1019
+ + +I P + + +GK E L+++L + + A
Sbjct: 1259 TKLVHDTLAKIGAPQYILSKALAAKSGKMEALKQLLIECEICKNPDEEVEQPEDLGGLVA 1318
Query: 1020 TGHRVLIFFQMTQVMDIMEDFLRYLD----MKYLRLDGHTKSDDRTALLNTFNAPNSDYF 1075
+GHR LIF Q ++ D L+ + + +L LDG + DR ++N FN +
Sbjct: 1319 SGHRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNEDKT-ID 1377
Query: 1076 CFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSV 1135
+L+T GG+GLNL ADTVI D DWNP +DLQA DRAHR+GQ V + RLIT +V
Sbjct: 1378 VLILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTV 1437
Query: 1136 EEAILDKAHAKLDIDGKVIQAGKFDNKS 1163
EE ++ A KL+ +I A DN S
Sbjct: 1438 EEKVMSLAKFKLNTAQALIGA---DNTS 1462
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 211 bits (538), Expect = 6e-54
Identities = 156/546 (28%), Positives = 270/546 (48%), Gaps = 84/546 (15%)
Query: 566 KRIERNAKQRLQALKANDEEAYIKLLDQTKDTR-ITHLLKQTNTFLDSLTKAVKDQQSFT 624
+R+ER+ +++ + + ++L++ + R + L+ QT + ++K +
Sbjct: 384 ERVERDQRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKLGQGSEED 443
Query: 625 KDKIESHLDTQE-----------------LSEDNVGDKNGADSDDD------LERERIDY 661
+ +I S LD + L+++N D D +++ +
Sbjct: 444 QLRILSQLDEETNARLAAQDDYDAGEMKLLAQENAEAAMQRDLDKTRAFDVFAKKKEKEE 503
Query: 662 YEVAHSIKEEVKQQPSI---------LVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMG 712
E A E++K +P + GTLK YQ+KG+ W+ ++++ ++GILADEMG
Sbjct: 504 EEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKGMTWLANIYDQGISGILADEMG 563
Query: 713 LGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERK 772
LGKT+Q+I+ L ++ E GV P +VP + G P ERK
Sbjct: 564 LGKTVQSIAFLCHIAEHYGVFVPDFKVVP----------------------YWGSPAERK 601
Query: 773 -------PKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSL 825
K ++ F VV+T+++ ++ + ++IKW + ++DE +K+A S+
Sbjct: 602 ILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQ-RW 660
Query: 826 TLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDK 885
L + RL+L+GTP+QN++ ELWALL+F++P +F+S F+EWF+ + ++K
Sbjct: 661 KLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDI-ESHAENK 719
Query: 886 IALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLY---QQ 942
+ E++ I RLH +L+PF+LRR+KKDVE +L DK+E ++ C ++ Q LY +Q
Sbjct: 720 TGIDEKQ----ISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQ 775
Query: 943 MLKHRRLFIFDDSSNQKFSSSRGFN--NQIMQLRKICNHPFVFEEVEDQINP--ARETND 998
++ L S SSS N N +MQ RK+CNHP +FE D +P R
Sbjct: 776 KIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVCNHPELFER-RDARSPFFMRCAEY 834
Query: 999 TIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSD 1058
TI R + L+ R+LP K L++ ++ ++E +Y + Y R + D
Sbjct: 835 TIPRLIHEEGLIHRMLPSRKH-----LLYNRLLHYRRVLE---KYPLLAYRRFWWKKQPD 886
Query: 1059 DRTALL 1064
R LL
Sbjct: 887 SRYQLL 892
Score = 95.1 bits (235), Expect = 8e-19
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 998 DTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKS 1057
+T+ AGK +L+ +L + KA GHRVLI+ QMT+++D++E+++ + +Y+RLDG +K
Sbjct: 1080 ETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKI 1139
Query: 1058 DDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 1113
R ++ F +D F FLLSTRAGGLG+NL ADT+ T + P +L D
Sbjct: 1140 SARRDMVADFQT-RADIFVFLLSTRAGGLGINLTAADTLKSSVTPYRPKPNLIRSD 1194
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 209 bits (531), Expect = 4e-53
Identities = 152/487 (31%), Positives = 236/487 (48%), Gaps = 47/487 (9%)
Query: 706 ILADEMGLGKTIQTISLLTYLY----EAKGVHGPFLVIVPLSTLTNWNAEFDKWAPK--L 759
I+ADEMGLGKT+Q I+L+ L + K + +++ P S + NW E KW L
Sbjct: 332 IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTL 391
Query: 760 RKIAFKGPPMERKP------------KQALIKNREFDVVLTTFEYIIKERPLLSKIKWVH 807
+A G QA +N V++ ++E + + L
Sbjct: 392 TPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGL 451
Query: 808 TIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVK 867
+ DEGHR+KN S L+ T R+IL+GTP+QN+L E +ALL+F P + S
Sbjct: 452 MLADEGHRLKNGDS-LTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRA 510
Query: 868 SFDEWFNTPFANTGGQDKIALSEEETL--LVIRRLHKVLRPFLLRRLKKDVEKDLPDKVE 925
F + F P G+D A +E T +++L ++ F++RR + K LP K E
Sbjct: 511 EFRKNFENPILR--GRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYE 568
Query: 926 KVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQ---LRKICNHPFV 982
V+ + LQ++LY +++K R + +K G + + L+K+CNHP +
Sbjct: 569 HVIFVNLKPLQNELYNKLIKSREV--------KKVVKGVGGSQPLRAIGILKKLCNHPNL 620
Query: 983 FE-----------EVEDQIN-PARETNDTIWRSAGKFELLERILPKFKA-TGHRVLIFFQ 1029
E+ D N P + D + + KF +LER L K K + ++++
Sbjct: 621 LNFEDEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTESDDKIVLISN 680
Query: 1030 MTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLN 1089
TQ +D++E RY +RLDG + R L++ FN P F FLLS++AGG G+N
Sbjct: 681 YTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGIN 740
Query: 1090 LQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDI 1149
L A+ +I+ D DWNP D QA R R GQK + I R I+ ++EE I + K+ +
Sbjct: 741 LIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSL 800
Query: 1150 DGKVIQA 1156
V+ A
Sbjct: 801 SSCVVDA 807
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 207 bits (527), Expect = 1e-52
Identities = 161/508 (31%), Positives = 247/508 (47%), Gaps = 48/508 (9%)
Query: 684 LKEYQLKGLQWMVSLFNNHL----NG-ILADEMGLGKTIQTISLLTYLYEAKGVHGP--- 735
L+ +Q++G++++ + NG I+ADEMGLGKT+Q I+LL L + G
Sbjct: 264 LRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTLLKQSPQAGKPTI 323
Query: 736 --FLVIVPLSTLTNWNAEFDKWAPK--LRKIAFKGPPMERKPKQAL-----IKNREFD-- 784
++ P S + NW E KW K + G +++ AL + R+
Sbjct: 324 EKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQWASVHGRQVTRP 383
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
V++ ++E + L+ + + DEGHR+KN+ S L+ T + R+IL+GTP+
Sbjct: 384 VLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDS-LTFTALDKLNVQRRVILSGTPI 442
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QN+L E ++LLNF P + S + F + + P D +E + L K++
Sbjct: 443 QNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDKENGDAKLAELAKIV 502
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
F++RR + K LP K E V+ C +S Q LY KH FI N+ R
Sbjct: 503 NRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLY----KH---FITSPEINKIL---R 552
Query: 965 GFNNQIMQ----LRKICNHPFVFEEVEDQIN------------PARETNDTIWRS-AGKF 1007
G +Q ++ L+KICNHP + ED R + I S +GK
Sbjct: 553 GTGSQPLKAIGLLKKICNHPDLLNLTEDLEGCEALFPPGFIPRELRGRDRNIDSSLSGKM 612
Query: 1008 ELLERILPKFKA-TGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNT 1066
+LER+L + K T ++++ T +D+ E R K LRLDG + R L++T
Sbjct: 613 LVLERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDT 672
Query: 1067 FNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 1126
FN P D F FLLS++AGG G+NL A+ +I+FD DWNP D QA R R GQK + +
Sbjct: 673 FNDPEKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFV 732
Query: 1127 LRLITDNSVEEAILDKAHAKLDIDGKVI 1154
R I ++EE I + K + V+
Sbjct: 733 YRFIATGTIEEKIFQRQSHKQSLSSCVV 760
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 202 bits (515), Expect = 3e-51
Identities = 130/355 (36%), Positives = 200/355 (55%), Gaps = 47/355 (13%)
Query: 711 MGLGKTIQTISLLTYLYEA--KGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPP 768
MGLGKTIQ+I T+LYE G+ GPFL+I PLST+ NW EF W + + + G
Sbjct: 1 MGLGKTIQSI---TFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSL 56
Query: 769 MERKPKQA-----------LIKNR-EFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRM 816
+ R+ Q +I+ F ++TTFE I+ L+ I+W IIDE HR+
Sbjct: 57 ISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRL 116
Query: 817 KNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTP 876
KN KL L + +++++LTGTPLQN + EL++LL+F+ P F S +F + F
Sbjct: 117 KNKNCKLLEGLKLM-NLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG-- 173
Query: 877 FANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQ 936
+ ET +++L +L+P +LRRLK+DVEK L K E +++ +++ +Q
Sbjct: 174 -------------DLETEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQ 220
Query: 937 HKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQI------ 990
K Y+ +L+ F+ S ++ N +M+LRK CNHP++ + E++I
Sbjct: 221 KKYYRAILEKNFSFL---SKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRD 277
Query: 991 --NPARETN--DTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFL 1041
NPA + +SAGK L++++LPK KA GH+VLIF QM + +DI+ED+L
Sbjct: 278 TYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 332
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 200 bits (508), Expect = 2e-50
Identities = 153/515 (29%), Positives = 253/515 (48%), Gaps = 45/515 (8%)
Query: 679 LVGGTLKEYQLKGLQWMVSLFNN----HLNG-ILADEMGLGKTIQTISLLTYLY----EA 729
+VG L+ +Q G+++M +G I+ADEMGLGKT+Q ISLL L +A
Sbjct: 197 VVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGLGKTLQCISLLWTLLRQSPDA 256
Query: 730 KGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALI----------K 779
+++ P S + NW+ E KW P++ ++ +I K
Sbjct: 257 CPTVSKSIIVCPSSLVKNWDKEIKKWLGT----RLNAMPVDSGKREQIIACLNSFMADSK 312
Query: 780 NR-EFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLI 838
R V++ ++E +L I DEGHR+KN+++ L+ + R++
Sbjct: 313 MRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSEN-LTYQALSGLKCARRVL 371
Query: 839 LTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETL--LV 896
++GTP+QN+L E ++L+NFV P + + F + F G+D A SE++
Sbjct: 372 ISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILK--GRDADASSEDQKKGEEK 429
Query: 897 IRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSS 956
+ + ++ ++RR + K LP K E ++ CK S LQ LY ++++ + +
Sbjct: 430 TKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKLIECEKQNRIVEKD 489
Query: 957 NQKFSSSRGFNNQIMQLRKICNHPF-VFEEVEDQINPARETNDTIWRSA----------- 1004
+S+ F I L+K+CNHP+ V++E + N R +I+ +
Sbjct: 490 KGATASALSF---ITHLKKLCNHPYLVYDEFQKPDNRFRNKCLSIFPESFNPKSFDPSFS 546
Query: 1005 GKFELLERILPKF-KATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTAL 1063
GK ++L+ IL K T + ++ TQ +D + + ++RLDG R+ +
Sbjct: 547 GKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYDFVRLDGSMSIKQRSKI 606
Query: 1064 LNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1123
++TFN P S FCFLLS++AGG GLNL A+ +++FD DWNP D QA R R GQK
Sbjct: 607 VDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKM 666
Query: 1124 VRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
I RL+ S+EE + + K + V+ AG+
Sbjct: 667 CFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGE 701
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 197 bits (501), Expect = 1e-49
Identities = 156/543 (28%), Positives = 274/543 (49%), Gaps = 47/543 (8%)
Query: 652 DDLERERIDYYEV----AHSIKEEVKQQPSI------LVGGTLKEYQLKGLQWMVS-LFN 700
D LE++ + YE AH + K++ + ++ L+ +Q +G++++ + +
Sbjct: 111 DPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS 170
Query: 701 NHLNG----ILADEMGLGKTIQTISLLTYLY----EAKGVHGPFLVIVPLSTLTNWNAEF 752
+ G I+ADEMGLGKT+Q I+L+ L E K +V+ P S + NW E
Sbjct: 171 RRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEV 230
Query: 753 DKW-APKLRKIAFKGPPMER--KPKQALIKNR----EFDVVLTTFEYIIKERPLLSKIKW 805
KW +++ +A G + + + + R +++ ++E +L K
Sbjct: 231 GKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSV 290
Query: 806 VHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNS 865
I DEGHR+KN++++ L++ ++ R++++GTP+QN+L E ++L++FV I +
Sbjct: 291 GLVICDEGHRLKNSENQTYQALDSL-NTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 866 VKSFDEWFNTPFANTGGQDKIALSEEETLLV--IRRLHKVLRPFLLRRLKKDVEKDLPDK 923
F + F P G+D A + L +R L ++ L+RR + K LP K
Sbjct: 350 AHEFKKHFELPILK--GRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVK 407
Query: 924 VEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVF 983
+E+V+ C+++ LQ +LY++ L+ + ++ K S S + I L+K+CNHP +
Sbjct: 408 IEQVVCCRLTPLQTELYKRFLRQAKPA--EELLEGKMSVSS--LSSITSLKKLCNHPALI 463
Query: 984 -----EEVE------DQINPARETNDTIWRSAGKFELLERILPKFKA-TGHRVLIFFQMT 1031
EE + D P + + +GK +L+ IL ++ + +V++ T
Sbjct: 464 YDKCVEEEDGFVGALDLFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYT 523
Query: 1032 QVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQ 1091
Q +D+ E R Y+RLDG R ++ FN+P+S F F+LS++AGG GLNL
Sbjct: 524 QTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLI 583
Query: 1092 TADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDG 1151
A+ +++FD DWNP D QA R R GQK I RL++ ++EE I + K +
Sbjct: 584 GANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSS 643
Query: 1152 KVI 1154
V+
Sbjct: 644 CVV 646
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 196 bits (498), Expect = 2e-49
Identities = 100/246 (40%), Positives = 156/246 (62%), Gaps = 8/246 (3%)
Query: 910 RRLKKDVEKD-LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNN 968
+RLKKDV KD +P K E +L+ MS+ Q ++Y+ ++ + + + K S N
Sbjct: 325 KRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQ-VLTKKRDAKIS------N 377
Query: 969 QIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFF 1028
+M+LR++C+HP++ + E + A E + ++GK +LL++++ K K GHRVLI+
Sbjct: 378 VLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYT 437
Query: 1029 QMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGL 1088
Q + ++ED+ + + Y R+DG +R ++ FNA NS+ FCFLLSTRAGG+G+
Sbjct: 438 QFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGI 497
Query: 1089 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLD 1148
NL TADTVII+D+DWNPH DLQA R HR+GQ N+V I RLI +VEE +++ K+
Sbjct: 498 NLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKML 557
Query: 1149 IDGKVI 1154
++ V+
Sbjct: 558 LEHLVV 563
Score = 85.1 bits (209), Expect = 8e-16
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 8/152 (5%)
Query: 620 QQSFTKDKIESHLDTQELSEDNVGD-KNGADSDDDLERE-RIDYYEVAHSIKEEVKQ--- 674
++ K K S+ ++ SE ++ D +N D+ R D Y +EE KQ
Sbjct: 157 EEYLVKYKELSYRNSYWESESDISDFQNEIQRFKDINSSSRRDKYVENERNREEFKQFDL 216
Query: 675 QPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHG 734
P L G TL YQL+GL ++ ++ N ILADEMGLGKTIQ+I+ L L+E
Sbjct: 217 TPEFLTG-TLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LS 273
Query: 735 PFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKG 766
P LV+ PLST+ NW EF WAP + + + G
Sbjct: 274 PHLVVAPLSTIRNWEREFATWAPHMNVVMYTG 305
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 186 bits (472), Expect = 2e-46
Identities = 134/475 (28%), Positives = 229/475 (48%), Gaps = 28/475 (5%)
Query: 704 NGILADEMGLGKTIQTISLL------TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAP 757
+ ILADEMGLGKT+QTI+++ +Y +V+ P++ L NW EF W
Sbjct: 187 SAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLG 246
Query: 758 KLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKE-RPLLSKIKWVHTIIDEGHRM 816
R + E Q N+ + +++T +E + R I I DE HR+
Sbjct: 247 HERIHVYIARCAE--DFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDIDLLICDEAHRL 304
Query: 817 KNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTP 876
K+ S+ +TLN + RL+LTGTPLQN+L E ++++NF++P + SF + P
Sbjct: 305 KSMSSQTWITLNKL-KTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYERP 363
Query: 877 FANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQ 936
+ + + ++RL + F LRR + K LP + + VL K + Q
Sbjct: 364 ILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTHQQ 423
Query: 937 HKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIM-QLRKICNHPFVFEEVEDQINPARE 995
+Y +L F S +QK G+ +I+ +L KICN + ++
Sbjct: 424 ENVYGHVLDG-----FKSSVDQK-----GYYLKILTRLSKICNSTILLRNEKENFLSTEL 473
Query: 996 TNDTIWR------SAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYL 1049
+ ++ S+ K ++L +L F+ + +I Q + ++++E FL L +++
Sbjct: 474 QDKHVFEQENMLLSSSKLQILAALLKSFQRGCQKAVIVSQYKETLELIELFLSILHVRFC 533
Query: 1050 RLDGHTKSDDRTALLNTFNAPN-SDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1108
+L G T +R +++ FN + ++ LLS++AGG GLNL + +II++ WNP QD
Sbjct: 534 KLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQD 593
Query: 1109 LQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKS 1163
LQA R +R GQK V I ++ ++E I + + K + I + K+
Sbjct: 594 LQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKN 648
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 184 bits (468), Expect = 7e-46
Identities = 125/383 (32%), Positives = 196/383 (50%), Gaps = 37/383 (9%)
Query: 537 DLRIDKKAQRVKLGHRLINLHTNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKD 596
DLR KKA+R L +KEE R R ++L L E Y + + D
Sbjct: 702 DLR--KKAEREALDRA--------KKEEELRESRRQARKLDFL-ITQTELYSHFVGRKMD 750
Query: 597 TRITHLLKQTNTFLDSLTKAVKDQQS--------FTKDKIESHLDTQELSEDNVGDKNGA 648
R L TNT S D++ ++ ++ + +L + N ++
Sbjct: 751 -REQDLPSATNTASVSEINFDSDEEEDIRRLAVESAQEAVQKAREHSQLFDAN-RQQSPN 808
Query: 649 DSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILA 708
+S D+ +++ EVKQ ++ LKEYQLKGL W+ +L+ +NGILA
Sbjct: 809 NSSSDMNEGEMNFQNPTLVNAFEVKQPKMLMC--KLKEYQLKGLNWLANLYEQGINGILA 866
Query: 709 DEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPP 768
DEMGLGKT+Q+IS++ YL E + GPFLVI P STL NW E ++ PKL+ I + G
Sbjct: 867 DEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGST 926
Query: 769 MERK--------PKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQ 820
+RK +N F VV+T+++ ++ + +KW + I+DE +K++
Sbjct: 927 KDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKWQYMILDEAQAIKSSS 986
Query: 821 SKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANT 880
S +L + + RL+LTGTP+QN + ELWALL+F++P +F+S F EWF+ +
Sbjct: 987 SSRWKSLLAFKCRN-RLLLTGTPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDI-ES 1044
Query: 881 GGQDKIALSEEETLLVIRRLHKV 903
Q L+E++ ++RLH +
Sbjct: 1045 HAQSNTQLNEQQ----LKRLHMI 1063
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 178 bits (452), Expect = 5e-44
Identities = 103/275 (37%), Positives = 161/275 (58%), Gaps = 21/275 (7%)
Query: 889 SEEETLLVIRRLHKVLRPFLLRRLKKDVE----KDLPDKVEKVLKCKMSALQHKLYQQML 944
SE+ET+ L RP RR +K + D P+++EK++ S +Q ++ ++
Sbjct: 5 SEKETI----ELSPTGRP--KRRTRKSINYSKIDDFPNELEKLI----SQIQPEVDRERA 54
Query: 945 KHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSA 1004
+ N K N +M LRK CNHP++ E D + + ++ + ++
Sbjct: 55 VVEVNIPVESEVNLKLQ------NIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNS 108
Query: 1005 GKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALL 1064
GKF +L+R+LP+ K GH+VL+F QMT ++DI+ D+ D + RLDG +R +
Sbjct: 109 GKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNM 168
Query: 1065 NTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1124
++FN + + F FL+STRAGGLG+NL ADTVII+D+DWNP DLQAQDR HRIGQ V
Sbjct: 169 HSFNT-DPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPV 227
Query: 1125 RILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKF 1159
+ RL+T N++++ I+++A AK ++ +I F
Sbjct: 228 VVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHF 262
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 176 bits (445), Expect = 3e-43
Identities = 84/190 (44%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
Query: 970 IMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQ 1029
+M LRK CNHP++ E D + + ++ + ++GKF +L+R+LP+ K GH+VL+F Q
Sbjct: 1 MMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ 60
Query: 1030 MTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLN 1089
MT ++DI+ D+ D + RLDG +R +++FN + + F FL+STRAGGLG+N
Sbjct: 61 MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGIN 119
Query: 1090 LQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDI 1149
L ADTVII+D+DWNP DLQAQDR HRIGQ V + RL+T N++++ I+++A AK +
Sbjct: 120 LTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKL 179
Query: 1150 DGKVIQAGKF 1159
+ +I F
Sbjct: 180 EKLIIHKNHF 189
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 175 bits (443), Expect = 6e-43
Identities = 137/437 (31%), Positives = 208/437 (47%), Gaps = 56/437 (12%)
Query: 737 LVIVPLSTLTNWNAEFDKWAPKLRKIAFKG-PPMERKPKQALIKNREFDVVLTTFEYIIK 795
L+IVP S + NW AEFDKW +R A + Q+ IK + V+ +++ +
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLMPYLVI--SYDLAQR 245
Query: 796 ERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALL 855
L I++ + DEGH++KN KL TL + RLILTGTP+QN+ E ++LL
Sbjct: 246 HVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSL-EIPRRLILTGTPMQNDFEEFYSLL 304
Query: 856 NFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKD 915
+FV P +F S+ F K+ E +L++++ +LRR D
Sbjct: 305 DFVRPSVFGSIVEFR--------------KMCSDRPE------QLNELIDECMLRRTAAD 344
Query: 916 VE-KDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLR 974
V+ K LP+K E +L C S +Q KH I D + S I R
Sbjct: 345 VDLKHLPEKHEYILFCAASPIQ--------KHVHSEICDYMTGDALSL-------IFFAR 389
Query: 975 KICNHP-FVFEEVEDQINPARETNDTIW--------------RSAGKFELLERILPKFKA 1019
++ NHP + + + ++ ++ + + +GK L ++ F+
Sbjct: 390 QLANHPKLLLDNLREKTEKSKAHKHSPLLLAFDGAHMPRGGVKESGKLTALVDMIKCFRL 449
Query: 1020 TGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLL 1079
+I + +D+++ YL+ K LRLDG T+ DR L+ TFN FLL
Sbjct: 450 LQECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLL 509
Query: 1080 STRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAI 1139
ST+AGG+GLNL A +++FD+DWNP D QA R R GQ I RLIT ++EE +
Sbjct: 510 STKAGGVGLNLIGASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKM 569
Query: 1140 LDKAHAKLDIDGKVIQA 1156
L + K + G VI A
Sbjct: 570 LQRQIKKTGL-GCVIDA 585
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 174 bits (440), Expect = 1e-42
Identities = 109/347 (31%), Positives = 175/347 (50%), Gaps = 22/347 (6%)
Query: 641 NVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWMVSLFN 700
N+G N D D + + + VK L+ G L++YQ GL W+ L+
Sbjct: 1012 NIGKPNAKDIADVTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYR 1071
Query: 701 NHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLR 760
+LNGILADE GLGKT+Q I+ +L +G GP LV+V + W E +W P L+
Sbjct: 1072 KNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLK 1131
Query: 761 KIAFKGPPMERKPK-QALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNA 819
+++ G E K K Q + F V +T++ + ++++W +IDE R+K
Sbjct: 1132 ILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGM 1191
Query: 820 QSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFAN 879
+ + T S RL+L +PL N ELW +++F++P I + P+ +
Sbjct: 1192 TERHWEAVFT-LQSQQRLLLIDSPLHNTFLELWTMVHFLVPGI-----------SRPYLS 1239
Query: 880 TGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKL 939
+ + S++ V+ RLH+V +PF+LRR K+DVEK L K E VLKC++S Q L
Sbjct: 1240 SPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKAL 1299
Query: 940 YQQMLKHRRLFIFDDSSNQKFSSSRGFN--NQIMQLRKICNHPFVFE 984
Y+ + I + + S N + +++L++ICNHP + E
Sbjct: 1300 YEDV-------ILQPGTQEALKSGHFVNVLSILVRLQRICNHPGLVE 1339
Score = 110 bits (274), Expect = 2e-23
Identities = 57/137 (41%), Positives = 85/137 (61%), Gaps = 1/137 (0%)
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTAL 1063
+GK E L +L K K+ G RVLI QM ++DI+E FL + + Y+R+D + S+ R L
Sbjct: 1861 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1920
Query: 1064 LNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1123
+ +FN FC +LST + G+NL ADTV+ +D D NP D +AQ+ RIG+ +
Sbjct: 1921 MRSFNRDRR-IFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1979
Query: 1124 VRILRLITDNSVEEAIL 1140
+ I RL++ NS+EE +L
Sbjct: 1980 IHIYRLVSGNSIEEKLL 1996
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 171 bits (434), Expect = 6e-42
Identities = 100/218 (45%), Positives = 131/218 (59%), Gaps = 10/218 (4%)
Query: 1070 PNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 1129
P SD + F+LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ EVRILRL
Sbjct: 2 PKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRL 61
Query: 1130 ITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKSTXXXXXXXXXXXXXXXXXXXXXXXXX 1189
IT+ S+EE IL +A KLD+DGKVIQAGKFDNKST
Sbjct: 62 ITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKST-----PEEREAFLRSLLEHDGDDDH 116
Query: 1190 XXXXXXXXXXXXXXXLARNENEIKVFQELDAQRIRTQM--ENGITNRLMENSELPECYNV 1247
++R + E+ +F++LD +R T + + RL+ +ELP+ Y V
Sbjct: 117 DLTYGELQDDELNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFYKV 176
Query: 1248 DIE--AKLAEEEKQNVFVGGRGNRERRTAHYSDELSEE 1283
+++ A + E ++ ++ R R R + Y++ +E
Sbjct: 177 EVDSFAVQSSSELEDQYL-ERKRRRRNSISYTELTLDE 213
Score = 72.0 bits (175), Expect = 7e-12
Identities = 35/111 (31%), Positives = 66/111 (58%), Gaps = 1/111 (0%)
Query: 1386 RSADNATKTLKERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKY 1445
RS T + K++ + + E+++ ++ D R ++ +FL P+++LYPDYY++IK
Sbjct: 254 RSGRKNTPSYKQKA-LRRYCMEIFERLYNLQSEDGRFVNGLFLYPPNRKLYPDYYIIIKR 312
Query: 1446 PAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELE 1496
P A + ++I + Y + +++ DF L+F NA YN E SI++ D+ +E
Sbjct: 313 PIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLME 363
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 171 bits (432), Expect = 1e-41
Identities = 164/586 (27%), Positives = 252/586 (42%), Gaps = 103/586 (17%)
Query: 664 VAHSIKEEVKQQPSILVGGTLKEYQLKGLQWM----------VSLFNNHLNGILADEMGL 713
V I EE + P + LK +Q+ G+++M V + L ILA MGL
Sbjct: 668 VVREIGEEAVRVPRS-ISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGL 726
Query: 714 GKTIQTISLLTYLYEAKGVH-GPFLVIVPLSTLTNWNAEFDKWAP---KLRKIAFKGPPM 769
GKT Q I+ L + L++ P++ L NW +EF+KW P K +I G
Sbjct: 727 GKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVS 786
Query: 770 ERKPKQALIKNRE----FDVVLTTFEYIIKERPL--LSKIKWVHT---------IIDEGH 814
+ L K R+ F + T F + R + L+ + + + DE H
Sbjct: 787 RERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAH 846
Query: 815 RMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFN 874
+KN ++ + L R+ LTG+PLQNNL E + +++FV S F F
Sbjct: 847 IIKNTKADTTQALK-QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQ 905
Query: 875 TPFANTGGQDKIALSEEETLLVIRR--LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKM 932
P N GQ + +E+ ++ R L++ L+ F+ R V+KDLP K V+ K+
Sbjct: 906 NPIEN--GQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKL 963
Query: 933 SALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFV---------- 982
S LQ LYQ+ L+ L+ F D + + F L +I NHP +
Sbjct: 964 SPLQRILYQRFLE---LYGFSDGRTDE-RMRKNFFAAYQVLAQILNHPGIPQLRSEDSKN 1019
Query: 983 -------------------------------FEEVEDQINP----------ARETNDTIW 1001
+++D+++ ++ N +
Sbjct: 1020 GRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVS 1079
Query: 1002 RSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL------------DMKYL 1049
+GK LL IL G + L+F Q +D++E +L + +
Sbjct: 1080 DFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWY 1139
Query: 1050 RLDGHTKSDDRTALLNTFNAP-NSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1108
R+DG T+S +R L++ FN P N C L+STRAG LG+NL A+ VII D WNP D
Sbjct: 1140 RIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYD 1199
Query: 1109 LQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
LQA RA R GQK V RL+ ++EE I + K + +V+
Sbjct: 1200 LQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1245
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 168 bits (426), Expect = 5e-41
Identities = 153/495 (30%), Positives = 230/495 (45%), Gaps = 76/495 (15%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLS 743
L +Q +GL W+ SL GIL D+MGLGKT+Q S L L+ +K + LV+ P +
Sbjct: 377 LYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKT 435
Query: 744 TLTNWNAEFDKWAPKLRKIAFKG-PPMERKPKQALIKNREFD---------VVLTTFEYI 793
L +W ++++A G M R+ K RE+D ++LTT++ +
Sbjct: 436 LLPHW----------MKELATVGLSQMTREYYGTSTKAREYDLHHILQGKGILLTTYDIV 485
Query: 794 IKERPLLSKI------------KWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTG 841
L KW + I+DEGH +KN ++ + +L S +R+I++G
Sbjct: 486 RNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSL-LEIPSSHRIIISG 544
Query: 842 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETL--LVIRR 899
TP+QNNL L FN K E + G DK A E+ + V +
Sbjct: 545 TPIQNNLKAL----------SFNRFKQNYEHYILR-----GTDKNATDREQRIGSTVAKN 589
Query: 900 LHKVLRPFLLRRLKKDVEKD------LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFD 953
L + ++PF LRRLK +V D L K E V+ +++A Q +LY+ L +
Sbjct: 590 LREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAF 649
Query: 954 DSSNQKFSSSRGFNNQIMQLRKICNHPFVFEE--VEDQINPARETNDTIWRSAGKFELLE 1011
D S + L+KIC+HP + + ED + T AG E L
Sbjct: 650 DGSPLA---------ALTILKKICDHPLLLTKRAAEDVLEGMDST--LTQEEAGVAERLA 698
Query: 1012 RILPKFKATGH----RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTF 1067
+ T I +++ +M ++ D L +LR+DG TK+ DR + F
Sbjct: 699 MHIADNVDTDDFQTKNDSISCKLSFIMSLL-DSLTSNGYSFLRIDGTTKAPDRLKTVEEF 757
Query: 1068 NAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1127
+ FLL+++ GGLGL L AD VI+ D WNP D Q+ DRA+RIGQ +V +
Sbjct: 758 QEGHVAPI-FLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVY 816
Query: 1128 RLITDNSVEEAILDK 1142
RL+T +VEE I K
Sbjct: 817 RLMTSATVEEKIYRK 831
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 164 bits (414), Expect = 1e-39
Identities = 82/154 (53%), Positives = 106/154 (68%)
Query: 1002 RSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRT 1061
++AGK L++++LPK A GH+VLIF QM + +DI+ED+L Y R+DG + + R
Sbjct: 3 QAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQ 62
Query: 1062 ALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1121
A ++ F P+SD F FLL TRAGGLG+NL ADT IIFD+DWNP DLQAQ R HRIGQ
Sbjct: 63 AAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQS 122
Query: 1122 NEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQ 1155
V++ RLIT NS E + DKA KL +D V+Q
Sbjct: 123 KAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQ 156
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 147 bits (370), Expect = 2e-34
Identities = 106/332 (31%), Positives = 173/332 (51%), Gaps = 34/332 (10%)
Query: 564 ELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSF 623
+++R ++ Q+L + ++E + + D T+ R+ + T+ TK
Sbjct: 1905 KIRRFQQKQSQQLNIFENIEDEPFNQ--DFTEVDRVLDMSVHTDETSGETTK-----HYL 1957
Query: 624 TKDKIESHLD-TQELSEDNVGDK-------NGADSDDDLERERIDYYEVAHSIKEEVKQQ 675
K K + D T EL ED DK N + + ++ + E + +++++
Sbjct: 1958 VKWKSLPYEDCTWELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPE----LWKKLEKT 2013
Query: 676 PSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGP 735
P G +L+ YQL+GL W+ + N N ILADEMGLGKTIQ+++ + +YE G+ GP
Sbjct: 2014 PVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYE-YGIRGP 2072
Query: 736 FLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQ------------ALIKNREF 783
FLVI PLST+ NW EF+ W + + + G ++ Q L + +F
Sbjct: 2073 FLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKF 2131
Query: 784 DVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTP 843
+V++TTFE I+ + L W +IDE HR+KN KL L + ++R++L+GTP
Sbjct: 2132 NVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLR-QLNLEHRVLLSGTP 2190
Query: 844 LQNNLPELWALLNFVLPKIFNSVKSFDEWFNT 875
LQNN+ EL++LLNF+ P F+S + F F +
Sbjct: 2191 LQNNISELFSLLNFLEPSQFSSQEEFMSEFGS 2222
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 141 bits (355), Expect = 9e-33
Identities = 95/278 (34%), Positives = 151/278 (54%), Gaps = 24/278 (8%)
Query: 684 LKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKG----------VH 733
L E+Q +G+++M +L+ N+ GIL D+MGLGKTIQTI+ L +Y G
Sbjct: 151 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK 210
Query: 734 GPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYI 793
GP L+I P S + NW +EF +WA + + G R +K R +V++T+F+
Sbjct: 211 GPVLIICPSSIIHNWESEFSRWASFFKVSVYHG--SNRDMILEKLKARGVEVLVTSFDTF 268
Query: 794 IKERPLLSKIKWVHTIIDEGHRMKNAQSKL---SLTLNTYYHSDYRLILTGTPLQNNLPE 850
+ P+LS I W I DE HR+KN +SKL L + T R+ LTGT +QN + E
Sbjct: 269 RIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKT----KKRIGLTGTVMQNKISE 324
Query: 851 LWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLH--KVLRPFL 908
L+ L +V P + + F ++++ P GQ A + R+ H +LR ++
Sbjct: 325 LFNLFEWVAPGSLGTREHFRDFYDEPLKL--GQRATAPERFVQIADKRKQHLGSLLRKYM 382
Query: 909 LRRLKKD-VEKDLPDKVEKVLKCKMSALQHKLYQQMLK 945
LRR K++ + + K + V+ C+MS LQ ++YQ+M++
Sbjct: 383 LRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 420
Score = 120 bits (302), Expect = 1e-26
Identities = 64/161 (39%), Positives = 100/161 (61%), Gaps = 2/161 (1%)
Query: 1002 RSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRT 1061
+ GK LE+++ + + G ++L+F +++DI+E FL + RLDG T ++ R
Sbjct: 537 KHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQ 596
Query: 1062 ALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1121
+L++ FNA S FL+ST+AGGLGLNL +A+ V+IFD +WNP DLQAQDR+ R GQK
Sbjct: 597 SLVDDFNASPSKQV-FLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQK 655
Query: 1122 NEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNK 1162
V + RL++ S+EE + + K + + AGK + +
Sbjct: 656 RHVVVFRLLSAGSLEELVYTRQVYKQQL-SNIAVAGKMETR 695
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 130 bits (327), Expect = 2e-29
Identities = 115/458 (25%), Positives = 210/458 (45%), Gaps = 62/458 (13%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFK 765
+LADEMGLGK++Q +++ Y Y+A P L++ P S W + + + P + +I
Sbjct: 218 LLADEMGLGKSVQALTIARY-YKADW---PLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 273
Query: 766 GPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLS- 824
+ P V + ++E ++ + +L K K+ I DE H +K+ +++ +
Sbjct: 274 DKSSDPLPDVCTSNT----VAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKARRTK 329
Query: 825 LTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQD 884
+ + + + ++L+GTP + EL+ + + K+F + F + G Q
Sbjct: 330 VATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCD-----GKQG 384
Query: 885 KIAL-------SEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQH 937
+ SEE ++ +RL ++RRLK DV KDLP+K +V+ +
Sbjct: 385 RFCFEAKGCTNSEELAAIMFKRL-------MIRRLKADVLKDLPEKRREVVYVSGPTIDA 437
Query: 938 KLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQ--IMQLRKICNHPFVFEEVEDQINPARE 995
++ + K R + +S +K S F + I++ +C H +E+ P
Sbjct: 438 RM-DDLQKARADYEKVNSMERKHESLLEFYSLTGIVKAAAVCEHI-----LENYFYP--- 488
Query: 996 TNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHT 1055
A +VLIF V+D ++ + + +R+DG T
Sbjct: 489 ----------------------DAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKT 526
Query: 1056 KSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 1115
S RTAL ++F ++ +LS A G+G+ L A V+ + +NP +QA+DRA
Sbjct: 527 PSHRRTALCDSFQTDDNIRVA-VLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRA 585
Query: 1116 HRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
HR+GQK+ V + LI + ++ + + KLD+ G+V
Sbjct: 586 HRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 623
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 130 bits (327), Expect = 2e-29
Identities = 115/458 (25%), Positives = 210/458 (45%), Gaps = 62/458 (13%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFK 765
+LADEMGLGK++Q +++ Y Y+A P L++ P S W + + + P + +I
Sbjct: 216 LLADEMGLGKSVQALTIARY-YKADW---PLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 271
Query: 766 GPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLS- 824
+ P V + ++E ++ + +L K K+ I DE H +K+ +++ +
Sbjct: 272 DKSSDPLPDVCTSNT----VAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKARRTK 327
Query: 825 LTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQD 884
+ + + + ++L+GTP + EL+ + + K+F + F + G Q
Sbjct: 328 VATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCD-----GKQG 382
Query: 885 KIAL-------SEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQH 937
+ SEE ++ +RL ++RRLK DV KDLP+K +V+ +
Sbjct: 383 RFCFEAKGCTNSEELAAIMFKRL-------MIRRLKADVLKDLPEKRREVVYVSGPTIDA 435
Query: 938 KLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQ--IMQLRKICNHPFVFEEVEDQINPARE 995
++ + K R + +S +K S F + I++ +C H +E+ P
Sbjct: 436 RM-DDLQKARADYEKVNSMERKHESLLEFYSLTGIVKAAAVCEHI-----LENYFYP--- 486
Query: 996 TNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHT 1055
A +VLIF V+D ++ + + +R+DG T
Sbjct: 487 ----------------------DAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKT 524
Query: 1056 KSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 1115
S RTAL ++F ++ +LS A G+G+ L A V+ + +NP +QA+DRA
Sbjct: 525 PSHRRTALCDSFQTDDNIRVA-VLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRA 583
Query: 1116 HRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
HR+GQK+ V + LI + ++ + + KLD+ G+V
Sbjct: 584 HRVGQKDSVFVQYLIAKKTADDVMWNMVQQKLDVLGQV 621
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 122 bits (306), Expect = 4e-27
Identities = 122/453 (26%), Positives = 198/453 (42%), Gaps = 57/453 (12%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFK 765
++ DEMGLGKT Q +++ Y + P LV ST +W PK+
Sbjct: 266 MICDEMGLGKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKV------ 315
Query: 766 GPPMERKPKQALIKNR----EFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQS 821
P+ Q L N+ E V++T++ + + L + K+ I DE H +KN+++
Sbjct: 316 --PIHYV--QVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKA 371
Query: 822 KLSLTLNTYYHSDYRLIL-TGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANT 880
K + T R++L +GTP + EL+ L + K N ++ F + +T
Sbjct: 372 KCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFME-FTTRYCDGKQST 430
Query: 881 GGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLY 940
G D S E L VI L ++LRR K +V L +K + + L L
Sbjct: 431 FGWDANGQSNLEELKVILHLK-----YMLRRTKVEVLPQLAEKNRETV-----VLDPALV 480
Query: 941 QQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTI 1000
+ + D+ N++ +++G + + LR F E + T+
Sbjct: 481 WTNAETKETL---DAFNKELKTAKGRATEEILLR------FYARTAEVKTRAVCAYLKTL 531
Query: 1001 WRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDR 1060
+ KF + HRV+ MD + DFL L + Y+R+DG T+SD R
Sbjct: 532 VKEQKKFIIFAH---------HRVM--------MDAISDFLSGLKVHYIRIDGQTRSDHR 574
Query: 1061 TALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 1120
+ ++TF +S LLS +A G+ L A+ ++ + DWNP QA+ RAHRIGQ
Sbjct: 575 SDSVDTFQKKSSCKVA-LLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQ 633
Query: 1121 KNEVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
V LI N+ ++ I + K ++ KV
Sbjct: 634 TKPVICRYLIAHNTADDIIWNMLKNKQEVLSKV 666
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 121 bits (303), Expect = 1e-26
Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 151/594 (25%)
Query: 687 YQLKGLQWMVSLFNNH-LNGILADEMGLGKTIQTISL------------------LTYLY 727
+Q + L W++ + GILAD+MGLGKT+ I+L LT+L
Sbjct: 573 HQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTALTWLS 632
Query: 728 EAKGV----HGPFLVIVPLSTLTNWNAEFDKW--APKLRKIAFKGPPMERKPKQALIKNR 781
+ HG L+I P S + +W E +K + KLR + GP + + +
Sbjct: 633 KDDSCDFTSHGT-LIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVL----S 687
Query: 782 EFDVVLTTFEYIIKERPL--------------------LSKIKWVHTIIDEGHRMKNAQS 821
+D+V+TT+ + KE P L +I W I+DE H +KN +
Sbjct: 688 TYDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAHNVKNPRV 747
Query: 822 KLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFN--TPFAN 879
+ S+ + + R +TGTP+QNNL ++++LL F+ F+ F+ W + +
Sbjct: 748 QTSIAV-CKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFD---EFNLWRSQVDNGSK 803
Query: 880 TGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKD------LPDKVEKVLKCKMS 933
GG+ RL + + LLRR K ++ LP + ++ K+S
Sbjct: 804 KGGE---------------RLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLKLS 848
Query: 934 ALQHKLYQQMLKHRRLFI-----------------------------------FDDSSNQ 958
+ +Y R + ++++
Sbjct: 849 EDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEEPRHSEAADS 908
Query: 959 KFSSSRGFNNQIMQLRKICNHPFVFE---------------EVEDQINPA-------RET 996
SS+ +Q+++LR+ C H + + +E+Q++ E
Sbjct: 909 PRSSTVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEP 968
Query: 997 NDTIWRSAG--KFELLERILPKFK--------------ATGHRVLIFFQMTQVMDIMEDF 1040
+ T+ + K EL E + K + + +I Q T ++ ++
Sbjct: 969 SSTVSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALH 1028
Query: 1041 LRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFD 1100
L+ + Y +DG R L+ FN L+S AGG+GLNL + + + D
Sbjct: 1029 LKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQ-VMLISLLAGGVGLNLTGGNHLFLLD 1087
Query: 1101 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
WNP + QA DR +R+GQ+ +V I R + + +VEE IL K D+ +V+
Sbjct: 1088 MHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVL 1141
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 120 bits (302), Expect = 1e-26
Identities = 76/212 (35%), Positives = 109/212 (50%), Gaps = 32/212 (15%)
Query: 643 GDKNGADSDDDLERERIDYY----EVAHSIKEEVKQQPSIL--VGGTLKEYQLKGLQWMV 696
G K+ +DD +R Y + +K++ + QP+ L G L YQ++G+ W+
Sbjct: 674 GRKSKLKVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLR 733
Query: 697 SLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWA 756
+ ++ ILADEMGLGKTIQT++ L LY+ GPFLV VPLSTL NW EF+ WA
Sbjct: 734 YSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWA 793
Query: 757 PKLRKIAFKGPPMERKPKQALIKNRE----------------------FDVVLTTFEYII 794
P I + G K +A+I+ E F+V+LT++E I
Sbjct: 794 PDFYCITYIGD----KDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELIS 849
Query: 795 KERPLLSKIKWVHTIIDEGHRMKNAQSKLSLT 826
+ L I W ++DE HR+K+ QSK S T
Sbjct: 850 MDAACLGSIDWAVLVVDEAHRLKSNQSKKSST 881
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 117 bits (292), Expect = 2e-25
Identities = 108/378 (28%), Positives = 171/378 (44%), Gaps = 69/378 (18%)
Query: 664 VAHSIKEEVKQQPSILVGGT---LKEYQLKGLQWMVSLF----NNHLNGILADEMGLGKT 716
V ++K++ Q+ S + G L ++Q++GL W+ S ++ GILAD+MGLGKT
Sbjct: 210 VLDNVKDDSMQRQSSFIPGMHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKT 269
Query: 717 IQTISLLTYLYEAKGVHG--PFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPK 774
IQ I+L+ K H LV+ PLS + W +E + KL I + G + K
Sbjct: 270 IQMIALILSHPLPKKKHSIKSTLVVAPLSLIKQWESEVQTKS-KLTAIVYHGASRYKLLK 328
Query: 775 QALIKNREFDVVLTTFEYII-----------------------KERPLLSKIKWVHTIID 811
E+DVV+TT++ ++ K++P L W I+D
Sbjct: 329 VI----HEYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILD 384
Query: 812 EGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDE 871
E H +KN SK +L + R LTGTPLQNN+ EL++L+ F+ FN + +
Sbjct: 385 EAHTIKNKSSKSALACCALQGIN-RWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKD 443
Query: 872 WFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVE----KDLPDKVEKV 927
+ P L + E LV +RL +L +LRR K +E KD K+
Sbjct: 444 QISLP-----------LCQGEENLVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKL 492
Query: 928 LK-------CKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNN---QIMQLRKIC 977
K CK + Y + ++ + + ++ K + + N +++LR+ C
Sbjct: 493 SKRLVYKVICKFEESERDFYSNLARNMERTMSNFVNSGKL--GKNYTNILCLLLRLRQAC 550
Query: 978 NHP----FVFEEVEDQIN 991
NHP F FE+ D N
Sbjct: 551 NHPQSLNFQFEQDVDAFN 568
Score = 86.7 bits (213), Expect = 3e-16
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
+ +IF Q T +DI++ LR + ++R DG + R L+ + +S L S +
Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRS-DSGTQVLLCSLK 730
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
G LGLNL A VI+ D WNP + QA DR HRIGQ+ +V + +L+ +N++EE I++
Sbjct: 731 CGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL 790
Query: 1143 AHAKLDIDGKVIQAGK 1158
+ K D+ + + GK
Sbjct: 791 QNLKRDLAKQALGDGK 806
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 116 bits (291), Expect = 2e-25
Identities = 101/391 (25%), Positives = 177/391 (44%), Gaps = 62/391 (15%)
Query: 787 LTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSK-LSLTLNTYYHSDYRLILTGTPLQ 845
+ +++ + K LL + + I DE H +KN Q+K S L + Y ++L+GTP
Sbjct: 301 IVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPAL 360
Query: 846 NNLPELWALLNFVLPKIFNSVKSF-------------DEWFNTPFANTGGQDKIALSEEE 892
+ EL+ L + P ++ ++ + ++ + + G + A + +E
Sbjct: 361 SRPIELFKQLEALYPDVYRNIHEYGGRYCKGVSPLHIEKLPRSSYKGFFGTYQGASNHDE 420
Query: 893 TLLVIRRLHKVLR-PFLLRRLKKDVEKDLPDK---------VEKVLKCKMSALQHKLYQQ 942
LH +++ ++RRLKKDV +LP K K +K +++AL H+L
Sbjct: 421 -------LHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMK-QINALFHELKVV 472
Query: 943 MLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWR 1002
K + DD + KF + N+I + P V + +E+ I
Sbjct: 473 KSKIKDCISEDDIKSLKF-IEKNLINKIYTDSAVAKIPAVLDYLENVIE----------- 520
Query: 1003 SAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTA 1062
G + L+F +++ + FL+ + +R+DG T + R A
Sbjct: 521 -----------------AGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQA 563
Query: 1063 LLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 1122
L++ F + +LS RA G+G+ L A TVI + W P +QA+DRAHRIGQ +
Sbjct: 564 LVSDFQ-DKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 622
Query: 1123 EVRILRLITDNSVEEAILDKAHAKLDIDGKV 1153
V I L+ +++V++ I D +KLD G+V
Sbjct: 623 SVNIHYLLANDTVDDIIWDVVQSKLDNLGQV 653
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 115 bits (289), Expect = 4e-25
Identities = 134/552 (24%), Positives = 234/552 (42%), Gaps = 87/552 (15%)
Query: 611 DSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSI-- 668
D + + + S T K++ + + +E + ++ ++L R ++ + ++ +
Sbjct: 44 DVVLRPSNKRLSTTLSKLDESVYDVKGNEWRISGRDYVAVKEELRRNKLVFDDIPKGVLR 103
Query: 669 --KEEVKQQPSILVG---GTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLL 723
++E Q L+G L +Q +G++ + N I+AD+MGLGKTIQ +++
Sbjct: 104 IARKEAGWQKFELIGPIYSMLLPFQREGVEHAL---NRGGRMIVADDMGLGKTIQALAV- 159
Query: 724 TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREF 783
Y Y A+ P ++I P S L + WA R+ F G +A++ R+
Sbjct: 160 AYYYRAEW---PLVIIAPASLL-------EDWADACRR--FLG-------MEAMVMRRKE 200
Query: 784 D----VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYR-LI 838
D + + ++E +L+ V I DE H +K+ Q+K + + R L+
Sbjct: 201 DFGQEIGVVSYEVASSHANVLACGAGV-VIADECHYLKSLQTKRTKAIVPLLQKVSRALL 259
Query: 839 LTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIR 898
L+GTP + EL+ +++ V IF + + D S E
Sbjct: 260 LSGTPAVSRPLELYPIISAVDRTIFPRFAEYGARYCNGRKVGQWYDYKGCSNAE------ 313
Query: 899 RLHKVLRPFLL-RRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSN 957
LH VLR FL+ RR K +V LP K + + + + Q D
Sbjct: 314 ELHYVLRKFLMIRRTKDEVLGQLPPKFRRQVVLECTGRQ-----------------DDPR 356
Query: 958 QKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKF 1017
+ N +MQ R E V +++P ++ T+ KF
Sbjct: 357 KDLVGESVDTNVVMQYR---------EAVGLKVDPVKQYLATMVEKGMKF---------- 397
Query: 1018 KATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCF 1077
++F T++M+ +E F ++ +R+DG S R L+ F N +
Sbjct: 398 -------VVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQE-NEEVMVA 449
Query: 1078 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
LLS A GL L V+ + WNP LQA+DR HRIGQK+ V I+ L+ +++E
Sbjct: 450 LLSITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVAKGTIDE 509
Query: 1138 AILDKAHAKLDI 1149
+ K +KL++
Sbjct: 510 YVWPKLLSKLNV 521
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 112 bits (279), Expect = 6e-24
Identities = 110/447 (24%), Positives = 186/447 (41%), Gaps = 52/447 (11%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFK 765
+LAD+MGLGKTIQ I + + + P LV+VP S W F +W P L
Sbjct: 455 LLADDMGLGKTIQAICIAAFYRK----EWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCIN 510
Query: 766 GPPMERKPKQALIKNREFDVVLTTFEYIIK-ERPLLSKIKWVHTIIDEGHRMKNAQ-SKL 823
+ A + N + +F+ + K E+ L + K V IIDE H +KN++ ++
Sbjct: 511 VVVTGKDRLTAGLIN------IVSFDLLSKLEKQLKTPFKVV--IIDESHFLKNSRTARC 562
Query: 824 SLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ 883
+ + ++L+GTP + EL+ + V P F +F + G
Sbjct: 563 RAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGW 622
Query: 884 DKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQM 943
D S L ++ + +LRRLK DV LP K K++ + + +
Sbjct: 623 DYSGSSNLGELKLL-----LEEAVMLRRLKSDVLSQLPAKQRKIVVIAPGRINARTRAAL 677
Query: 944 -LKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWR 1002
+ + D + Q+ + F N+ + + P V E + D + RE
Sbjct: 678 DAAAKEMTTKDKTKQQQKDALILFFNRTAEAK----IPSVIEYILDLLESGRE------- 726
Query: 1003 SAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTA 1062
+ L+F V+D + L ++++R+DG T S +R
Sbjct: 727 --------------------KFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAERED 766
Query: 1063 LLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKN 1122
L F + + +LS A +GL +AD V+ + WNP +QA+DR HRIGQ +
Sbjct: 767 LCQQFQL-SERHAVAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTS 825
Query: 1123 EVRILRLITDNSVEEAILDKAHAKLDI 1149
V I L+ + ++ + K+ +
Sbjct: 826 SVGIHYLVAKGTADDYLWPLIQEKIKV 852
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 112 bits (279), Expect = 6e-24
Identities = 138/530 (26%), Positives = 215/530 (40%), Gaps = 114/530 (21%)
Query: 561 EKEELKRIERNAKQRLQ--------ALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDS 612
++EEL+R +R +QR L+ EE ++ D + +L Q LDS
Sbjct: 22 QQEELERRKRLEQQRKDYAAPIPTVPLEFLPEEIALRASDGPQLP--PRVLAQEVICLDS 79
Query: 613 LTKAVKDQQSFTKDKIES--------HL--DTQELSEDNVGDKNGADSDDDLERERIDYY 662
+ +D++S + IE H+ ++ +SED+ ++ G +D+ +R
Sbjct: 80 -SSGSEDEKSSRDEVIELSSGEEDTLHIVDSSESVSEDDEEEEKGGTHVNDVLNQRDALG 138
Query: 663 EVAHSIKEEVKQQPSIL---VGGTLKEYQLKGLQWMVSLFNNHLNG---------ILADE 710
V ++ +++ L + +K +Q+ G++++ L ILA
Sbjct: 139 RVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHS 198
Query: 711 MGLGKTIQTISLLTYLYEAKGVHGP---FLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGP 767
MGLGKT+Q IS + L+ H P L IVP++TL NW AEF+ W P +
Sbjct: 199 MGLGKTLQVISFIDVLFR----HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNK 254
Query: 768 PMERKPK----------------------------QALIKNREFDVVLTTFEYIIKERPL 799
P E +P+ L+ E +LT + RP
Sbjct: 255 PEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPK 314
Query: 800 LSKIKWVHTII------------------------------DEGHRMKNAQSKLSLTLNT 829
+K K H +I DEGHR+KN Q+ S L
Sbjct: 315 KTK-KRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKN 373
Query: 830 YYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALS 889
S R++LTG PLQNNL E W +++FV P + + F F P N GQ +
Sbjct: 374 -IRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILN--GQCIDSTP 430
Query: 890 EEETLLVIRR--LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHR 947
++ L+ R LH +L F+ RR ++ LP K E V+ ++S +Q LY Q +
Sbjct: 431 QDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDR- 489
Query: 948 RLFIFDDSSNQKFSSSRGFN--NQIMQLRKICNHPFVFEEVEDQINPARE 995
F D + S G N KI NHP V E + + A E
Sbjct: 490 ----FRDCGS---SGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANE 532
Score = 102 bits (255), Expect = 4e-21
Identities = 68/220 (30%), Positives = 110/220 (49%), Gaps = 26/220 (11%)
Query: 954 DSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERI 1013
+++N KF GFN ++ N+ +E +D + + ++ K LL +
Sbjct: 569 EATNSKFLQGVGFN----PFQERGNNIVTYEWAKDLLT---NYQTGVLENSPKMVLLFHL 621
Query: 1014 LPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDM------------------KYLRLDGHT 1055
+ + G ++L+F Q + ++E+FL ++ Y RLDG T
Sbjct: 622 IEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVRNISYFRLDGST 681
Query: 1056 KSDDRTALLNTFNAP-NSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDR 1114
+ +R L+N FN P N + FLLSTRAG LG+NL A+ V++FD WNP D QA R
Sbjct: 682 PAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCR 741
Query: 1115 AHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
+R GQK I RL+ D ++E+ I D+ +K + +V+
Sbjct: 742 VYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVV 781
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 107 bits (268), Expect = 1e-22
Identities = 75/204 (36%), Positives = 105/204 (50%), Gaps = 20/204 (9%)
Query: 673 KQQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGV 732
+ P++L G G W+ F+ IL DEMGLGKT QTI+L YL
Sbjct: 5 RDSPTLLPAG--------GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 56
Query: 733 HGPFLVIVP---LSTLTNWNAEFDKWAPKLRKIAFKGPPMERK-PKQALIKNREFDVVLT 788
GPFL++ P L NAE + + K ER +Q L + F V+LT
Sbjct: 57 EGPFLILCPYVCFEQLERRNAEICSRSFLCNICSDK---EERACLQQDLKQESRFHVLLT 113
Query: 789 TFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNL 848
T+E +K+ L W ++DE HR+KN S L TL+ + + L+LTGTP+QN+L
Sbjct: 114 TYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSL 172
Query: 849 PELWALLNFVLPKIFNSVKSFDEW 872
EL++LL+FV P +F S +EW
Sbjct: 173 QELYSLLSFVEPDLF----SKEEW 192
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 107 bits (266), Expect = 2e-22
Identities = 122/480 (25%), Positives = 213/480 (43%), Gaps = 49/480 (10%)
Query: 542 KKAQRVKLGHRLINLH-TNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRIT 600
KK +R+K+ + + +N E+EE ++ E ++ + + DE K + + +I
Sbjct: 1423 KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRK-KIR 1481
Query: 601 HLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERID 660
+LK ++ A+K+++ K E + ++L E +D +
Sbjct: 1482 KILKDDKLRTET-QNALKEEEERRKRIAEREREREKLRE--------VIEIEDASPTKCP 1532
Query: 661 YYEVAHSIKEEVKQQPSILVGGT----LKEYQLKGLQWMVSLFNNHLNG---------IL 707
++E ++P + V LK +Q+ G+Q+M + IL
Sbjct: 1533 ITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCIL 1592
Query: 708 ADEMGLGKTIQTISLL-TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLR---KIA 763
A MGLGKT+Q +S L T L K LV+ PL+T NW EF+KW L+ K+
Sbjct: 1593 AHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLE 1652
Query: 764 FKGPPMERKPKQA--LIKNREFD--VVLTTFEY---IIKERPLLS-KIKWV--------- 806
++P++ +++ + D V++ +E + + R + S K+K +
Sbjct: 1653 VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1712
Query: 807 --HTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFN 864
+ DEGH +KN S +S +N+ S R+ILTGTPLQNNL E ++NF+ +
Sbjct: 1713 PDFVVCDEGHILKNEASAVSKAMNS-IRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLG 1771
Query: 865 SVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKV 924
S+K F F P N D + L+++L + R+ + K LP K
Sbjct: 1772 SIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKH 1831
Query: 925 EKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFE 984
E VL +M+++Q KLYQ L H + ++S + + L +I HP+ +
Sbjct: 1832 EYVLAVRMTSIQCKLYQYYLDH-LTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1890
Score = 91.7 bits (226), Expect = 8e-18
Identities = 58/184 (31%), Positives = 87/184 (46%), Gaps = 23/184 (12%)
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL------------------- 1044
+GK LL IL + G +VL+F Q +D++EDFL
Sbjct: 2017 SGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGK 2076
Query: 1045 ---DMKYLRLDGHTKSDDRTALLNTFN-APNSDYFCFLLSTRAGGLGLNLQTADTVIIFD 1100
++ Y RLDG T + R FN N F++ST+AG LG+NL A+ VIIFD
Sbjct: 2077 WLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFD 2136
Query: 1101 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
WNP D+Q+ R +R GQ V + R + ++E+ I D+ K + +V+ + +
Sbjct: 2137 ASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 2196
Query: 1161 NKST 1164
T
Sbjct: 2197 RHFT 2200
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 107 bits (266), Expect = 2e-22
Identities = 122/480 (25%), Positives = 213/480 (43%), Gaps = 49/480 (10%)
Query: 542 KKAQRVKLGHRLINLH-TNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRIT 600
KK +R+K+ + + +N E+EE ++ E ++ + + DE K + + +I
Sbjct: 1219 KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRK-KIR 1277
Query: 601 HLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERID 660
+LK ++ A+K+++ K E + ++L E +D +
Sbjct: 1278 KILKDDKLRTET-QNALKEEEERRKRIAEREREREKLRE--------VIEIEDASPTKCP 1328
Query: 661 YYEVAHSIKEEVKQQPSILVGGT----LKEYQLKGLQWMVSLFNNHLNG---------IL 707
++E ++P + V LK +Q+ G+Q+M + IL
Sbjct: 1329 ITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCIL 1388
Query: 708 ADEMGLGKTIQTISLL-TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLR---KIA 763
A MGLGKT+Q +S L T L K LV+ PL+T NW EF+KW L+ K+
Sbjct: 1389 AHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLE 1448
Query: 764 FKGPPMERKPKQA--LIKNREFD--VVLTTFEY---IIKERPLLS-KIKWV--------- 806
++P++ +++ + D V++ +E + + R + S K+K +
Sbjct: 1449 VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1508
Query: 807 --HTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFN 864
+ DEGH +KN S +S +N+ S R+ILTGTPLQNNL E ++NF+ +
Sbjct: 1509 PDFVVCDEGHILKNEASAVSKAMNS-IRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLG 1567
Query: 865 SVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKV 924
S+K F F P N D + L+++L + R+ + K LP K
Sbjct: 1568 SIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKH 1627
Query: 925 EKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFE 984
E VL +M+++Q KLYQ L H + ++S + + L +I HP+ +
Sbjct: 1628 EYVLAVRMTSIQCKLYQYYLDH-LTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1686
Score = 91.7 bits (226), Expect = 8e-18
Identities = 58/184 (31%), Positives = 87/184 (46%), Gaps = 23/184 (12%)
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL------------------- 1044
+GK LL IL + G +VL+F Q +D++EDFL
Sbjct: 1813 SGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGK 1872
Query: 1045 ---DMKYLRLDGHTKSDDRTALLNTFN-APNSDYFCFLLSTRAGGLGLNLQTADTVIIFD 1100
++ Y RLDG T + R FN N F++ST+AG LG+NL A+ VIIFD
Sbjct: 1873 WLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFD 1932
Query: 1101 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
WNP D+Q+ R +R GQ V + R + ++E+ I D+ K + +V+ + +
Sbjct: 1933 ASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 1992
Query: 1161 NKST 1164
T
Sbjct: 1993 RHFT 1996
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 107 bits (266), Expect = 2e-22
Identities = 122/480 (25%), Positives = 213/480 (43%), Gaps = 49/480 (10%)
Query: 542 KKAQRVKLGHRLINLH-TNLEKEELKRIERNAKQRLQALKANDEEAYIKLLDQTKDTRIT 600
KK +R+K+ + + +N E+EE ++ E ++ + + DE K + + +I
Sbjct: 1385 KKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSPGKGRK-KIR 1443
Query: 601 HLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDDLERERID 660
+LK ++ A+K+++ K E + ++L E +D +
Sbjct: 1444 KILKDDKLRTET-QNALKEEEERRKRIAEREREREKLRE--------VIEIEDASPTKCP 1494
Query: 661 YYEVAHSIKEEVKQQPSILVGGT----LKEYQLKGLQWMVSLFNNHLNG---------IL 707
++E ++P + V LK +Q+ G+Q+M + IL
Sbjct: 1495 ITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCIL 1554
Query: 708 ADEMGLGKTIQTISLL-TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLR---KIA 763
A MGLGKT+Q +S L T L K LV+ PL+T NW EF+KW L+ K+
Sbjct: 1555 AHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLE 1614
Query: 764 FKGPPMERKPKQA--LIKNREFD--VVLTTFEY---IIKERPLLS-KIKWV--------- 806
++P++ +++ + D V++ +E + + R + S K+K +
Sbjct: 1615 VSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPG 1674
Query: 807 --HTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFN 864
+ DEGH +KN S +S +N+ S R+ILTGTPLQNNL E ++NF+ +
Sbjct: 1675 PDFVVCDEGHILKNEASAVSKAMNS-IRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLG 1733
Query: 865 SVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKV 924
S+K F F P N D + L+++L + R+ + K LP K
Sbjct: 1734 SIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKH 1793
Query: 925 EKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVFE 984
E VL +M+++Q KLYQ L H + ++S + + L +I HP+ +
Sbjct: 1794 EYVLAVRMTSIQCKLYQYYLDH-LTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQ 1852
Score = 91.7 bits (226), Expect = 8e-18
Identities = 58/184 (31%), Positives = 87/184 (46%), Gaps = 23/184 (12%)
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL------------------- 1044
+GK LL IL + G +VL+F Q +D++EDFL
Sbjct: 1979 SGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGK 2038
Query: 1045 ---DMKYLRLDGHTKSDDRTALLNTFN-APNSDYFCFLLSTRAGGLGLNLQTADTVIIFD 1100
++ Y RLDG T + R FN N F++ST+AG LG+NL A+ VIIFD
Sbjct: 2039 WLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFD 2098
Query: 1101 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
WNP D+Q+ R +R GQ V + R + ++E+ I D+ K + +V+ + +
Sbjct: 2099 ASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 2158
Query: 1161 NKST 1164
T
Sbjct: 2159 RHFT 2162
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 104 bits (260), Expect = 1e-21
Identities = 102/381 (26%), Positives = 173/381 (44%), Gaps = 58/381 (15%)
Query: 641 NVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGG------TLKEYQLKGLQW 694
N+ D N DD +++ + ++ + E++ P+I G TL E+Q +GL W
Sbjct: 344 NLSDSNNQKVQDDQQQQLEELFK---DLDEQLVNDPTIREGTPAGLIPTLMEHQKEGLMW 400
Query: 695 MVSLF-NNHLNGILADEMGLGKTIQTISLL-TYLYEAKGVHGPFLVIVPLSTLTNWNAEF 752
+ L ++ GILAD+MGLGKT+Q ++LL T E+K V L+I P+S L W+ E
Sbjct: 401 LKRLEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKTT-LIITPVSLLQQWHNEI 459
Query: 753 -DKWAPKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYI-------------IKERP 798
K AP R + +K K A + +D+VLTT+ I I++
Sbjct: 460 LTKIAPSHRPTVYIHHGSSKKHKIAE-QLMSYDIVLTTYNVIAYEFKNKMAYDKSIEDNA 518
Query: 799 LLSKIK--------WVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPE 850
+ K + W I+DE +KN ++ L+ S YR L+GTP+QN + E
Sbjct: 519 PIKKFEHLPFFEAEWYRVILDEAQTIKN-RNTLAARGCCLLESTYRWCLSGTPMQNGVEE 577
Query: 851 LWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLR 910
++L+ F+ K ++ SF + F P + S T ++R +L+ LLR
Sbjct: 578 FYSLIKFLRIKPYSDWSSFSKDFTIPLS----------SNINTSAPMKRFRGLLKAVLLR 627
Query: 911 RLKKDVEK-----DLPDKVEKVLKCKMSALQHKLYQQMLK----HRRLFIFDDSSNQKFS 961
R K LP K + +S+ + + Y + R ++ + + +
Sbjct: 628 RTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYLQEGTITTHYG 687
Query: 962 SSRGFNNQIMQLRKICNHPFV 982
S +++LR+ C HP++
Sbjct: 688 SLLVL---LLRLRQACCHPWL 705
Score = 87.0 bits (214), Expect = 2e-16
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 996 TNDTIWRSAGKFELLERILPKF--KATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDG 1053
T+ W ++ K E + + K ++LIF Q +++ R +KYL G
Sbjct: 856 TDPKHWTTSTKIEKALNAVKEIIKKQPTDKILIFSQFVSFLELFTVPFRQEGIKYLMYTG 915
Query: 1054 HTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQD 1113
+ +R L F + + L+S +AG +GLNL A+ VII D WNP+ + QA D
Sbjct: 916 GLSTAERNQALINFEV-DPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVD 974
Query: 1114 RAHRIGQKNEVRILRLITDNSVEEAIL 1140
RAHRIGQ V ILR++T+N++EE +L
Sbjct: 975 RAHRIGQDKPVNILRIVTNNTIEERVL 1001
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 102 bits (253), Expect = 6e-21
Identities = 55/118 (46%), Positives = 78/118 (65%), Gaps = 4/118 (3%)
Query: 674 QQPSILVGG-TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGV 732
+QPSIL +LK YQ GL W+ + + LNGILADEMGLGKTIQ I+ L YLY+ +G
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQ-EGN 544
Query: 733 HGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNR--EFDVVLT 788
+GP L++VP ST+ NW E + W P L+ + + G ERK + I +R +++V++T
Sbjct: 545 NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVT 602
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 102 bits (253), Expect = 6e-21
Identities = 85/292 (29%), Positives = 126/292 (43%), Gaps = 65/292 (22%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPK------- 758
ILA MGLGKT+Q +S L ++P++TL NW +EF+ W P+
Sbjct: 415 ILAHSMGLGKTLQVVSFCDIFLRHTSAK-TVLCVMPINTLQNWLSEFNMWIPRYSTDSNV 473
Query: 759 ----------------------------------------LRKIAFKGPPMERKPKQALI 778
R +A K RK K ++I
Sbjct: 474 RPRNFDIFVLNDQQKTLTARAKVILNWVHDGGVLLIGYELFRLLALK-LVKTRKRKGSVI 532
Query: 779 K----NREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSD 834
+ + D++ +E ++K P L I DEGHR+KN+ + +SL L +
Sbjct: 533 RPDGMDSSSDLMNLVYEALVKPGPDL-------VICDEGHRIKNSHAGISLALKEI-RTR 584
Query: 835 YRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETL 894
R++LTG PLQNNL E W +++FV P + F F P N GQ + ++ L
Sbjct: 585 RRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQN--GQCVDSTPDDIKL 642
Query: 895 LVIRR--LHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQML 944
+ R LH +L F+ RR ++ LP K E V+ KM+A Q KLY +
Sbjct: 643 MRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFM 694
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 100 bits (250), Expect = 1e-20
Identities = 59/162 (36%), Positives = 88/162 (53%), Gaps = 15/162 (9%)
Query: 1013 ILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMK--------------YLRLDGHTKSD 1058
IL + G ++LIF Q +D++E+ L+ ++ YLRLDG T
Sbjct: 785 ILDESTQIGEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGA 844
Query: 1059 DRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1118
DR L+N FN+ FL+STRAG LG+NL +A+ II D WNP D QA R +R
Sbjct: 845 DREKLINRFNS-EPGLSLFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRY 903
Query: 1119 GQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFD 1160
GQ+ + + RLI DNS+E +I ++ +K + +V+ + D
Sbjct: 904 GQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVD 945
Score = 85.9 bits (211), Expect = 5e-16
Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 18/193 (9%)
Query: 809 IIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKS 868
+ DEGH++KN +++S+TL ++ R++LTG PLQNNL E + +++FV PK + KS
Sbjct: 461 VCDEGHKIKNITAEISMTLGAI-NTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRKS 519
Query: 869 FDEWFNTPFANTGGQDKIALSEEETLLVIRRLH---KVLRPFLLRRLKKDVEKDLPDKVE 925
F + F P N D S ++ + ++R H ++++ F+ RR ++K LP+ E
Sbjct: 520 FIDRFEKPIKNGQCVDS---SPDDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKE 576
Query: 926 KVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQL---RKICNHPFV 982
VL + S +Q +LY+ + + N+ +++ N +M KI NHP +
Sbjct: 577 YVLLLRKSQIQRQLYRNFVLW--------AKNEIAANNDAVFNPLMAFSACSKIWNHPDI 628
Query: 983 FEEVEDQINPARE 995
+ +Q A E
Sbjct: 629 LYRLVEQKKRAEE 641
Score = 55.1 bits (131), Expect = 9e-07
Identities = 41/144 (28%), Positives = 64/144 (43%), Gaps = 33/144 (22%)
Query: 644 DKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGG-----------------TLKE 686
D + D ++E R+ A ++ K++ +LV L+
Sbjct: 199 DADQMDIQHNIEARRLKKMRSAKDLESTEKKEGRLLVNAGHPEEDPDIFVISHLTHVLQP 258
Query: 687 YQLKGLQWMVSLFNNHLNG------------ILADEMGLGKTIQTISLLTYLYEAKGVHG 734
+QL G+++M ++N + ILA MGLGKTIQ I+ A
Sbjct: 259 HQLGGIRFM---YDNTIESLGEYKKSDGFGCILAHSMGLGKTIQVITFSEIFLRATKAK- 314
Query: 735 PFLVIVPLSTLTNWNAEFDKWAPK 758
LVIVP++T+ NW +E+DKW PK
Sbjct: 315 KVLVIVPINTIQNWYSEYDKWIPK 338
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 100 bits (249), Expect = 2e-20
Identities = 86/340 (25%), Positives = 150/340 (43%), Gaps = 78/340 (22%)
Query: 705 GILADEMGLGKTIQTISLLTY--------------------------------------- 725
GILAD MGLGKT+ TISLL
Sbjct: 415 GILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFL 474
Query: 726 -----LYEAKGV--HGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALI 778
L E K V +G L++ P++ L W E + A K ++ + +PK A +
Sbjct: 475 GFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHA-KPGSLSVYVHYGQSRPKDAKL 533
Query: 779 KNREFDVVLTTFEYIIKE--------RPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTY 830
++ DVV+TT+ + E + ++W ++DE H +KN++S++SL
Sbjct: 534 LSQS-DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAAL 592
Query: 831 YHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSE 890
+D R LTGTP+QNNL +L++LL F+ + + + +++ PF E
Sbjct: 593 V-ADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPF------------E 639
Query: 891 EETLLVIRRLHKVLRPFLLRRLKKDVEKD------LPDKVEKVLKCKMSALQHKLYQQML 944
E ++ + +L+P +LRR K +++ LP +V+ C++S + Y +
Sbjct: 640 EGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALF 699
Query: 945 KHRRLFIFDD--SSNQKFSSSRGFNNQIMQLRKICNHPFV 982
K ++ FD + + +++LR+ C+HPF+
Sbjct: 700 KRSKV-KFDQFVEQGKVLHNYASILELLLRLRQCCDHPFL 738
Score = 84.7 bits (208), Expect = 1e-15
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 1001 WRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDR 1060
W + K L L +++G + ++F Q T +D+++ L + ++RLDG R
Sbjct: 859 WVESSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQR 918
Query: 1061 TALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 1120
+L F+ S L+S +AGG+G+NL A + D WNP + QA R HRIGQ
Sbjct: 919 EKVLKEFSEDGS-ILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQ 977
Query: 1121 KNEVRILRLITDNSVEE 1137
EV+I R I +VEE
Sbjct: 978 TKEVKIRRFIVKGTVEE 994
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 100 bits (248), Expect = 2e-20
Identities = 99/382 (25%), Positives = 168/382 (43%), Gaps = 76/382 (19%)
Query: 671 EVKQQPSILVGGTLKEYQLKGLQWMVSLFNNHL--NGILADEMGLGKTIQTISLLTYL-- 726
EV + + + +L +Q L WM S L GILAD+MGLGKT+ IS +
Sbjct: 426 EVLAEDPVGLKVSLMNHQKHALAWM-SWRERKLPRGGILADDMGLGKTLTMISSVLACKN 484
Query: 727 -----------------------------YEAKGV----HGPFLVIVPLSTLTNWNAEFD 753
+++KG G LV+ P S L W +E +
Sbjct: 485 GQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVE 544
Query: 754 KWAP--KLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPLLSKI---KWVHT 808
KL G E K K R++D+V+TT++ + +E LS + KW
Sbjct: 545 SKVSRQKLTVCVHHGNNRETKGKYL----RDYDIVVTTYQIVAREHKSLSAVFGVKWRRI 600
Query: 809 IIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKS 868
I+DE H ++N +S+ SL + YR LTGTP+QN +++ALL F+ F+ + +
Sbjct: 601 ILDEAHVVRNHKSQSSLAVCDL-RGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLHT 659
Query: 869 FDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKD-----LPDK 923
+ +W + A GGQ+ RL+ +++ +LRR K ++ D LP+K
Sbjct: 660 WKKWIDNKSA--GGQN--------------RLNLLMKSLMLRRTKAQLQSDGKLNSLPNK 703
Query: 924 VEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPFVF 983
++++ + + +YQ ++ + R +F +Q+ FN R N P +
Sbjct: 704 ELRLIEISLDKEEMNVYQTVMTYSRT-LFAQFLHQRAERETDFN-----YRSDANKP-TY 756
Query: 984 EEVEDQINPARETNDTIWRSAG 1005
+++D + ++ R AG
Sbjct: 757 NQIKDPNGAYYKMHEKFARMAG 778
Score = 94.7 bits (234), Expect = 1e-18
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 1002 RSAGKFELLERILPK--FKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDD 1059
R + K ++ +IL K++ + ++ Q T V+DI+ D L + L L+G +
Sbjct: 887 RPSSKINMVIQILKTSILKSSDDKAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKN 946
Query: 1060 RTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIG 1119
R ++N FN N+ LLS AGG+GLNL A+ +++ D WNP + QAQDR +R+G
Sbjct: 947 RQDIVNEFNDRNNQKRVLLLSLTAGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVG 1006
Query: 1120 QKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKST 1164
QK V I + + ++VE+ I KLD+ V+ K +K T
Sbjct: 1007 QKKNVIIYKFMCVDTVEQRIKGLQDKKLDLADGVLTGAKVSSKLT 1051
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 96.7 bits (239), Expect = 3e-19
Identities = 116/429 (27%), Positives = 177/429 (41%), Gaps = 70/429 (16%)
Query: 619 DQQSFTKDKIESHLDTQELSEDNVGDKNGADSDDD----------------LERERIDYY 662
D+Q + I + T++L ++ K A +DD ++ E ++
Sbjct: 374 DKQKNKRKHIRKIIKTKDL---DLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEIN 430
Query: 663 EVAHSIKEEVKQQPSILVGGTLKE---YQLKGLQWMVSLFNNHLNG---------ILADE 710
E+ EE K+ + G LK+ +Q+ G+++M L ILA
Sbjct: 431 ELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPGSGCILAHC 490
Query: 711 MGLGKTIQTISLL-TYLYEAK--GVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGP 767
MGLGKT+Q ++L T L + GV L+I PLST+ NW EF W + +
Sbjct: 491 MGLGKTLQVVTLSHTLLVNTRRTGVDR-VLIISPLSTVNNWAREFTSWMKFANRNDIEVY 549
Query: 768 PMER---KPKQALIKNREFD----VVLTTFEYII-----------KERPLLSKIKWVH-- 807
+ R KP + N F+ +L Y I K+R L +
Sbjct: 550 DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKKQREQLMQALVDPGP 609
Query: 808 --TIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNS 865
+ DEGH +KN ++ +S + T + R++LTGTPLQNNL E + ++ FV P + +
Sbjct: 610 DLVVCDEGHLLKNEKTSISKAV-TRMRTKRRIVLTGTPLQNNLREYYCMIQFVKPNLLGT 668
Query: 866 VKSFDEWFNTPFANTGGQDKIALSEEETLLVIRR---LHKVLRPFLLRRLKKDVEKDLPD 922
K + F P N D +E + L+ R LHK+L + RR + LP
Sbjct: 669 YKEYMNRFVNPITNGQYTDS---TERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLPP 725
Query: 923 KVEKVLKCKMSALQHKLY-QQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPF 981
K E V+ +S LQ KLY M HR + S LR+I HP
Sbjct: 726 KHEYVVYTTLSELQQKLYGYYMTTHR-----EQSGGDVVGKGARLFQDFQDLRRIWTHPM 780
Query: 982 VFEEVEDQI 990
D +
Sbjct: 781 NLRVNSDNV 789
Score = 95.1 bits (235), Expect = 8e-19
Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 25/184 (13%)
Query: 994 RETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMK------ 1047
RE N+ + K +L R+L + +A G ++L+F Q Q +D++E FL +D
Sbjct: 889 RELNNV--HHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEF 946
Query: 1048 ----------------YLRLDGHTKSDDRTALLNTFN-APNSDYFCFLLSTRAGGLGLNL 1090
Y RLDG + R A+ FN N FL+STRAGGLG+NL
Sbjct: 947 EGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINL 1006
Query: 1091 QTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDID 1150
A+ V+IFD WNP D Q+ R +R GQ I RLI ++E+ + ++ AK
Sbjct: 1007 VAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATA 1066
Query: 1151 GKVI 1154
+VI
Sbjct: 1067 KRVI 1070
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 96.3 bits (238), Expect = 3e-19
Identities = 102/363 (28%), Positives = 166/363 (45%), Gaps = 68/363 (18%)
Query: 671 EVKQ--QPSILVGGTLKEYQLKGLQWMVSLFNNHLNG-ILADEMGLGKTIQTISLLTYLY 727
EVKQ QP LV L +Q +G+ W+ ++ G ILADEMG+GKTIQTI+LL L
Sbjct: 343 EVKQIEQPKELVLNLLP-FQREGVYWLKRQEDSSFGGGILADEMGMGKTIQTIALL--LS 399
Query: 728 EAKGVHGPFLVIVPLSTLTNWNAEFDKWAPK-LRKIAFKGPPMERKPKQALIKNREFDVV 786
E +G P LV+ P+ + W E D K L + G + ++ +DVV
Sbjct: 400 EPRG--KPTLVVAPVVAIMQWKEEIDTHTNKALSTYLYYGQARDISGEEL----SSYDVV 453
Query: 787 LTTFEYI-----------------IKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNT 829
LT++ I +KE+ LL ++++ I+DE H +K S T NT
Sbjct: 454 LTSYNVIESVYRKERSGFRRKNGVVKEKSLLHQMEFYRIILDEAHGIK------SRTCNT 507
Query: 830 Y-----YHSDYRLILTGTPLQNNLPELWALLNFV-----------------LPKIFNSVK 867
+ ++ L+GTPLQN + EL++LL F+ L F+
Sbjct: 508 ARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFLRADPFAYYYCLQCECKSLHWRFSDRS 567
Query: 868 SFDEWFNTPFANTGGQDKIALS-------EEETLLVIRRLHKVLRPFLLRRLKKDVEKD- 919
+ DE + P ++T + L E L +++H +L+ +LRR K + D
Sbjct: 568 NCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGKLAFKKVHSLLKHIMLRRTKLERADDL 627
Query: 920 -LPDKVEKVLKCKMSALQHKLYQQM-LKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKIC 977
LP +V +V K + + +YQ + + +R F + ++ I ++R++
Sbjct: 628 GLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFNTYLAEGVVLNNYANIFQLITRMRQMA 687
Query: 978 NHP 980
+HP
Sbjct: 688 DHP 690
Score = 87.0 bits (214), Expect = 2e-16
Identities = 55/163 (33%), Positives = 84/163 (50%), Gaps = 10/163 (6%)
Query: 1001 WRSAGKFELL--ERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSD 1058
WRS+ K E L E L + K + ++F Q T ++D++ LR ++LDG
Sbjct: 788 WRSSTKIEALVEELYLLRKKDRTLKSIVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPK 847
Query: 1059 DRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1118
R A + F+ + + FL+S +AGG+ LNL A V + D WN QA DR HRI
Sbjct: 848 ARAATIEAFSN-DINITIFLVSLKAGGVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRI 906
Query: 1119 GQKNEVRILRLITDNSVEEAILD-------KAHAKLDIDGKVI 1154
GQK ++++ L +NS+E I++ HA +D D K +
Sbjct: 907 GQKRPIKVITLCIENSIESKIIELQEKKAQMIHATIDQDEKAL 949
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 95.9 bits (237), Expect = 4e-19
Identities = 83/341 (24%), Positives = 152/341 (44%), Gaps = 37/341 (10%)
Query: 668 IKEEVKQQPSILVGGTLKEYQLKGLQWMVSLF-NNHLNGILADEMGLGKTIQTISLLTYL 726
+K E Q +LV +L +Q++G WM S+ ++ G++AD+MGLGKTIQTI+LL
Sbjct: 236 LKNEQVQSAGLLV--SLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQ 293
Query: 727 YEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFKGPPMERKPKQALIKNREFDVV 786
+ L++V ++ L W E +K++ K + ++DVV
Sbjct: 294 KSQDPLRKTNLIVVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYELSQYDVV 353
Query: 787 LTTFEYIIKERP-------------------LLSKIKWVHTIIDEGHRMKNAQSKLSLTL 827
LTT+ + E L + W ++DE H ++N + L+
Sbjct: 354 LTTYSMLAYEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRN-RDTLAAKC 412
Query: 828 NTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIA 887
+ YR L+GTP+QN++ E ++LL F+ +K + W + FA + +
Sbjct: 413 CVKLDAKYRWCLSGTPIQNHIDEFYSLLKFL------RIKPYCVW--SLFAKDISRPLKS 464
Query: 888 LSEEETLLVIRRLHKVLRPFLLRRLKKDVEK-----DLPDKVEKVLKCKMSALQHKLYQQ 942
+ ++RL +L + RR K+ +LP K + + + + LY +
Sbjct: 465 YRADIVEAALKRLRILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNE 524
Query: 943 MLKHRRLFIFDDSSNQKFSSSRGF-NNQIMQLRKICNHPFV 982
+ + + + +N S GF +++LR+ C HP++
Sbjct: 525 QMSSAQSLVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHPWL 565
Score = 80.9 bits (198), Expect = 1e-14
Identities = 44/148 (29%), Positives = 83/148 (55%), Gaps = 3/148 (2%)
Query: 1001 WRSAGKFELLERILPKFKAT--GHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSD 1058
W+S+ K + + + ++L++ Q +Q + ++ L+ +++++R DG ++
Sbjct: 719 WKSSSKLNQARQTILDIIGSKRNEKILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSAN 778
Query: 1059 DRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1118
R L++FN + D L+S +AG +GLNL A+ VI+ + +NP + QA DR HR+
Sbjct: 779 QRQKSLHSFNN-DKDVLVMLVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRL 837
Query: 1119 GQKNEVRILRLITDNSVEEAILDKAHAK 1146
GQ+ V + R IT +++EE I+ K
Sbjct: 838 GQQKPVTVYRFITKDTIEERIVSVQRKK 865
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 94.0 bits (232), Expect = 2e-18
Identities = 88/301 (29%), Positives = 144/301 (47%), Gaps = 49/301 (16%)
Query: 737 LVIVPLSTLTNWNAEFDKWAPK---LRKIAFKGPPMERKPKQALIKNREFDVVLTTF--- 790
L+I PLS L+NW +F + L + GP R+P AL+ + D+VLTT+
Sbjct: 479 LIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREP--ALLSKQ--DIVLTTYNIL 534
Query: 791 --EYIIKERPLLSKIKWVHTIIDEGHRMKNA---QSKLSLTLNTYYHSDYRLILTGTPLQ 845
+Y K L I+W+ I+DEGH ++N Q+K L L S+ R +LTGTP+Q
Sbjct: 535 THDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLE----SERRWVLTGTPIQ 590
Query: 846 NNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLR 905
N+L +LW+LL+F+ K F EW++ Q + + +E L RRL +++
Sbjct: 591 NSLKDLWSLLSFLKLKPFID----REWWHRTI-----QRPVTMGDEGGL---RRLQSLIK 638
Query: 906 PFLLRRLKKDVEK-----DLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFI---FDDSSN 957
LRR K K +LP++ + +S + K+YQ + R I F++ +
Sbjct: 639 NITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGT- 697
Query: 958 QKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKF 1017
+ +++LR+IC H ++ P+ NDT EL ++++ K
Sbjct: 698 -VLAHYADVLGLLLRLRQICCHTYLLTNAVSSNGPS--GNDT------PEELRKKLIRKM 748
Query: 1018 K 1018
K
Sbjct: 749 K 749
Score = 85.1 bits (209), Expect = 8e-16
Identities = 57/179 (31%), Positives = 82/179 (44%), Gaps = 8/179 (4%)
Query: 987 EDQINPARETNDTIWRSAGKFELLERILPKFKATGHRV--LIFFQMTQVMDIMEDFLRYL 1044
E+ + + +D W S+ K L L + + L+ Q T + ++E L+
Sbjct: 815 EELARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKAS 874
Query: 1045 DMKYLRLDGHTKSDDRTALLNTF-NAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDW 1103
+ RLDG R + F N LLS +AGG+GLNL A V + D W
Sbjct: 875 GFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAW 934
Query: 1104 NPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNK 1162
NP + Q DR HR+GQK EV I + I +SVEE +L K+ + + AG F K
Sbjct: 935 NPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENML-----KIQNKKRELAAGAFGTK 988
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 91.3 bits (225), Expect = 1e-17
Identities = 128/510 (25%), Positives = 213/510 (41%), Gaps = 85/510 (16%)
Query: 684 LKEYQLKGLQWMVS-LFNNHLNG-ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVP 741
+K +Q++G Q++ S L + G I+A G GKT IS + + AK LV++P
Sbjct: 350 MKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQS-FLAKYPQAKPLVVLP 408
Query: 742 LSTLTNWNAEFDKWAPK-LRKIAFKGPPMERKPKQALIKNR-------------EFDVVL 787
L W EF +W + + + F E + +Q I + +F ++
Sbjct: 409 KGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTIV 468
Query: 788 ---TTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
TT +E +L K+ + I+DEGH +N + L +L + +++L+GT
Sbjct: 469 CDDTTDSLSCQE--ILLKVPSI-LILDEGHTPRNEDTNLLQSL-AQVQTPRKVVLSGTLY 524
Query: 845 QNNLPELWALLNFVLPKIF------NSVKSFDEWFNTPFAN--TGGQDKIALSEEET--- 893
QN++ E++ +LN V PK ++VK + TG +A ET
Sbjct: 525 QNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEH 584
Query: 894 -----------LLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQ 942
+ VI+ L ++ + +L K D +LP + + +S Q ++
Sbjct: 585 TLQKSEDFTVKIKVIQDLREMTKK-VLHYYKGDFLDELPGLADFTVVLNLSPKQLNEVKK 643
Query: 943 MLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNHPF--VFEEVEDQINPARETNDTI 1000
+ + +R F K S+ I HP VF + D ++ + T+
Sbjct: 644 LRREKRKF--------KVSAVGS---------AIYLHPKLKVFSDKSDDVS-----DTTM 681
Query: 1001 WRSAGKFELLERILPKF--------KATGHRVLIFFQMTQVMDIMEDFLRY-----LDMK 1047
K +L E + KF + G ++L+F Q + +E L +
Sbjct: 682 DEMVEKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKE 741
Query: 1048 YLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1107
L G+T S+ R + TFN+ + D F S +A G G++L A ++I D NP
Sbjct: 742 VFVLTGNTSSEQREWSMETFNS-SPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSV 800
Query: 1108 DLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
QA RA R GQK V RLI +S EE
Sbjct: 801 TRQAIGRAFRPGQKKMVHAYRLIAGSSPEE 830
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 90.1 bits (222), Expect = 2e-17
Identities = 124/535 (23%), Positives = 224/535 (41%), Gaps = 72/535 (13%)
Query: 666 HSIKEEVKQQ----PSILVGGTLKEYQLKGLQWMVSLFNNHLNG--ILADEMGLGKTIQT 719
H +E+V+Q P LV L +QL GL+ F G +ADEMGLGKT+Q
Sbjct: 183 HYTEEKVEQLIETLPRKLVNALLP-FQLDGLR-----FGLRRGGRCFIADEMGLGKTLQA 236
Query: 720 ISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRK------IAFKGPP--MER 771
I++ G LV+ P W E ++W P + P + R
Sbjct: 237 IAIAGCFIS----EGSILVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPR 292
Query: 772 KPKQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSK-----LSLT 826
PK VV+ +++ + R + + +W I+DE H ++ ++ K +
Sbjct: 293 WPK----------VVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTV 342
Query: 827 LNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKI 886
L+ + ++L+GTP + P L + K + V G Q KI
Sbjct: 343 LDVAEKVKHIILLSGTPSVSR-PGLLGKDKYEFAKTYCEVGLV----------RGIQGKI 391
Query: 887 ALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKV----LKCKMSALQHKLYQQ 942
+ ++ + + ++RRLK+ + LP K ++ LK AL + +
Sbjct: 392 FQDFSKGTRLLELNILLNQTVMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVSE 451
Query: 943 MLKHRRLFIFD--DSSNQKFSSSRGFNNQIMQLRKICNHPFVFEEVE-------DQINPA 993
K + I + + S++ ++RG N + + P +E + Q+ A
Sbjct: 452 AKKQKDGAIAEVTEKSHEPDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIA 511
Query: 994 RETNDTIWRS-----AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKY 1048
+ + W S +G E I +T ++++F +V+D +++F+ + +
Sbjct: 512 KLSAFREWLSLHPLLSGLDYTPEEIDGDRSST--KMVVFAHHHKVLDGIQEFICDKGIGF 569
Query: 1049 LRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQD 1108
+R+DG T DR + +F +S+ ++ AGG+GL+ A V+ + P
Sbjct: 570 VRIDGTTLPRDRQLAVQSFQF-SSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLL 628
Query: 1109 LQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGKFDNKS 1163
LQA+DRAHR GQ + V + ++++E+ + KL GK+D K+
Sbjct: 629 LQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKLHRISSTTD-GKYDGKT 682
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 89.7 bits (221), Expect = 3e-17
Identities = 70/224 (31%), Positives = 110/224 (48%), Gaps = 24/224 (10%)
Query: 660 DYYEVAHSIKEEVKQQPSILVGGTLKEYQLKGLQWM-VSLFNNHLNGILADEMGLGKTIQ 718
D ++ +++ E +QP L+ LK YQ + L W + + GILADEMG+GKTIQ
Sbjct: 111 DDFDEQNAVIAEAAEQPLDLIIPLLK-YQKEFLAWATIQELSAVRGGILADEMGMGKTIQ 169
Query: 719 TISLLTYLYE-----AKGVHGPFLVIVPLSTLTNWNAEFDKWAP--KLRKIAFKGPPMER 771
ISL+ E ++ G LV+VP L+ W E + R + + GP ++
Sbjct: 170 AISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDK 229
Query: 772 KPKQALIKNREFDVVLTTFEYIIKE----------RPLLSKIKWVHTIIDEGHRMKNAQS 821
++ + +D VLTT + E L IKW I+DE H +KN S
Sbjct: 230 NVQKLM----NYDFVLTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSS 285
Query: 822 KLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNS 865
+ + + + YR L+GTPLQN++ EL++L+++ F S
Sbjct: 286 RTAKAVFA-LEATYRWALSGTPLQNDVDELYSLVSYSFLNFFYS 328
Score = 77.8 bits (190), Expect = 1e-13
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
+ ++F Q T +D++ L + ++L G + A L F D L+S +
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKE-EPDCRVLLMSLQ 585
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDK 1142
AGG+ LNL A V + D WNP + QAQDR HRIGQ VR++R I + +VEE IL
Sbjct: 586 AGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTL 645
Query: 1143 AHAKLDI 1149
K D+
Sbjct: 646 QKKKEDL 652
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 89.4 bits (220), Expect = 4e-17
Identities = 52/139 (37%), Positives = 74/139 (52%), Gaps = 3/139 (2%)
Query: 1001 WRSAGKFELLERILPKFK--ATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSD 1058
W+ + K L + L K K +G + ++F Q T +D++E LR ++LR DG
Sbjct: 1105 WKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQK 1164
Query: 1059 DRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1118
R +L FN L+S +AGG+GLNL A +V + D WNP + QA R HRI
Sbjct: 1165 GREKVLKEFNETKQKTI-LLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRI 1223
Query: 1119 GQKNEVRILRLITDNSVEE 1137
GQK V + R I ++VEE
Sbjct: 1224 GQKRTVFVRRFIVKDTVEE 1242
Score = 85.9 bits (211), Expect = 5e-16
Identities = 79/324 (24%), Positives = 141/324 (43%), Gaps = 65/324 (20%)
Query: 705 GILADEMGLGKTIQTISLLTYL--------------------YEAKGVH---------GP 735
GILAD MGLGKT+ TI+L+ K +H G
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 736 FLVIVPLSTLTNWNAEFDKWAPK--LRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYI 793
L+I P++ L+ W E + + + + + G K DVVLTT+ +
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIA----SHDVVLTTYGVL 798
Query: 794 IKE------RPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDY-RLILTGTPLQN 846
+ +I W ++DE H +K+ +++ + T+ S + R LTGTPLQN
Sbjct: 799 TSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKA--TFELSSHCRWCLTGTPLQN 856
Query: 847 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRP 906
L +L++LL F+ + + + + + P+ N + ++ + +LRP
Sbjct: 857 KLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRG------------LKLIKAILRP 904
Query: 907 FLLRRLKKDVEK------DLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDD--SSNQ 958
+LRR K+ +K +LP +V++C+ S + Y + K ++ FD + +
Sbjct: 905 LMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKV-QFDQFVAQGK 963
Query: 959 KFSSSRGFNNQIMQLRKICNHPFV 982
+ +++LR+ CNHPF+
Sbjct: 964 VLHNYANILELLLRLRQCCNHPFL 987
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 89.0 bits (219), Expect = 5e-17
Identities = 122/563 (21%), Positives = 225/563 (39%), Gaps = 105/563 (18%)
Query: 525 LNSILDRCKSI--HDLRIDKKAQRVKL------GHRLINLHTNLEKEELKRIERNAKQRL 576
L ILD K++ H + ++ + + L +++ +H NL + + N Q
Sbjct: 349 LKPILDEQKALEKHKIELNSDPEIIDLDNDEICSNQVTEVHNNLRDTQHEEETMNLNQLK 408
Query: 577 QALKANDEEAYIKLLDQTKDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQE 636
KA +K L +T+ +R L+ N LT ++ +Q F K
Sbjct: 409 TFYKAAQSSESLKSLPETEPSRDVFKLELRNYQKQGLTWMLRREQEFAK----------- 457
Query: 637 LSEDNVGDKNGADSDDDLERE---RIDYYEVAHSIKEE-VKQQPSILVGGTLK--EYQLK 690
+ D + GA+ + L ++ D A +++++ V + I L E+ L
Sbjct: 458 AASDGEASETGANMINPLWKQFKWPNDMSWAAQNLQQDHVNVEDGIFFYANLHSGEFSLA 517
Query: 691 G--LQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY-----------LYEAKGV----- 732
L+ M+ GIL+DEMGLGKT+ SL+ L++ +
Sbjct: 518 KPILKTMIK------GGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDN 571
Query: 733 --------HGPF-----LVIVPLSTLTNWNAEFDKW--APKLRKIAFKGPPMERKPKQAL 777
P+ L++VP+S LT W+ EF K +P + + G +
Sbjct: 572 LPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLT 631
Query: 778 IKNREFDVVLTTFEYIIKERPLLSK----------------IKWVHTIIDEGHRMKNAQS 821
VVLTT+ + E SK + + IIDEGH ++N +
Sbjct: 632 KTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTT 691
Query: 822 KLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTG 881
S + + +LTGTP+ N L +L++L+ F+ + + + + +TPF +
Sbjct: 692 VTSKAVMAL-QGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKN 750
Query: 882 GQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEKD------LPDKVEKVLKCKMSAL 935
+ + ++ +L P LLRR K+ +KD LP K + + S
Sbjct: 751 YKQAFDV-----------VNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKS 799
Query: 936 QHKLYQQMLKHRRLFIFDDSSN----QKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQIN 991
Q LY+ +L + + + +K+S+ I++LR++C HP + ++
Sbjct: 800 QDLLYKFLLDKAEVSVKSGIARGDLLKKYST---ILVHILRLRQVCCHPGLIGSQDENDE 856
Query: 992 PARETNDTIWRSAGKFELLERIL 1014
+ N + + + L R++
Sbjct: 857 DLSKNNKLVTEQTVELDSLMRVV 879
Score = 81.6 bits (200), Expect = 9e-15
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Query: 1009 LLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYL----RLDGHTKSDDRTALL 1064
L E L + + G +V+IF Q + +DI+E L + K + + DG +RT++L
Sbjct: 1000 LKELQLLQDSSAGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVL 1059
Query: 1065 NTFNAPN-SDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNE 1123
F + S LLS +AGG+GLNL A + D W+P + QA DR HRIGQ N
Sbjct: 1060 ADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNS 1119
Query: 1124 VRILRLITDNSVEEAIL 1140
V+++R I +S+EE +L
Sbjct: 1120 VKVMRFIIQDSIEEKML 1136
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 89.0 bits (219), Expect = 5e-17
Identities = 81/315 (25%), Positives = 137/315 (42%), Gaps = 47/315 (14%)
Query: 592 DQTKDTRITHLLKQTNTFLDSLTKAVKDQQSFTKDKIESHLDTQELSEDNVGDKNGADSD 651
++T TH +K N + + K +D + + T + K +
Sbjct: 81 ERTATDENTHAIKNDNDEIIEI-KEERDVSDDDEPLTKKRKTTARKKKKKTSTKKKSPKV 139
Query: 652 DDLERERIDYYEVAHSIKE---EVKQQPSILV-------GGTLK--EYQLKGLQWMVSLF 699
ER + YE ++ ++K P + G T+K +QL+GL W++S
Sbjct: 140 TPYERNTLRLYEHHPELRNVFTDLKNAPPYVPQRSKQPDGMTIKLLPFQLEGLHWLISQE 199
Query: 700 NN-HLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAP- 757
+ + G+LADEMG+GKTIQTI+LL P LV+ P L W E ++
Sbjct: 200 ESIYAGGVLADEMGMGKTIQTIALLM----NDLTKSPSLVVAPTVALMQWKNEIEQHTKG 255
Query: 758 KLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEY-----------------IIKERPLL 800
+L+ + G K + +DVVLTT+ + K+ +L
Sbjct: 256 QLKIYIYHGASRTTDIKDL----QGYDVVLTTYAVLESVFRKQNYGFRRKNGLFKQPSVL 311
Query: 801 SKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLP 860
I + I+DE H +K+ QS + +N + R L+GTPLQN + E+++L+ F+
Sbjct: 312 HNIDFYRVILDEAHNIKDRQSNTARAVNN-LKTQKRWCLSGTPLQNRIGEMYSLIRFL-- 368
Query: 861 KIFNSVKSFDEWFNT 875
++ F ++F T
Sbjct: 369 ----NINPFTKYFCT 379
Score = 81.6 bits (200), Expect = 9e-15
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 1001 WRSAGKFELLERILPKFKATGHRV--LIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSD 1058
W+S+ K E L L K ++ + ++F Q T ++D++E L+ + ++L G
Sbjct: 615 WQSSTKIEALVEELYKLRSNKRTIKSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPT 674
Query: 1059 DRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRI 1118
R + F N FL+S +AGG+ LNL A V I D WNP + Q+ DR HRI
Sbjct: 675 QRDETIKYF-MNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRI 733
Query: 1119 GQKNEVRILRLITDNSVEEAILDKAHAKLDI 1149
GQ V+I R ++S+E I++ K ++
Sbjct: 734 GQYRPVKITRFCIEDSIEARIIELQEKKANM 764
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 87.0 bits (214), Expect = 2e-16
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 1025 LIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPN-SDYFCFLLSTRA 1083
++F Q +++ ++E L+ LRLDG RT ++ F P + L S +A
Sbjct: 729 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 788
Query: 1084 GGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKA 1143
G G+NL A V +FD WNP + QA DR HRIGQK EV+++R+I NS+EE +L+
Sbjct: 789 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 848
Query: 1144 HAKLDI 1149
K ++
Sbjct: 849 QKKKNL 854
Score = 62.8 bits (151), Expect = 4e-09
Identities = 63/250 (25%), Positives = 119/250 (47%), Gaps = 26/250 (10%)
Query: 737 LVIVPLSTLTNWNAEFDKWA-PKLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIK 795
L++ P S ++ W + ++ P + K+ L+K +D+VLTT+ +
Sbjct: 361 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMK---YDIVLTTYGTLAV 417
Query: 796 ERPL----LSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPEL 851
E + K++W+ I+DE H +KNA ++ S + + R +TGTP+QN +L
Sbjct: 418 EESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVV-CKLKASRRWAVTGTPIQNGSFDL 476
Query: 852 WALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRR 911
++L+ F+ + F S+KS+ W + G +K LS RL ++ LRR
Sbjct: 477 YSLMAFLRFEPF-SIKSY--WQSLIQRPLGQGNKKGLS---------RLQVLMATISLRR 524
Query: 912 LKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFN---N 968
K+ LP K + ++S + +LY M + + + +N S R ++ +
Sbjct: 525 TKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNG--SLMRNYSTVLS 582
Query: 969 QIMQLRKICN 978
I++LR++C+
Sbjct: 583 IILRLRQLCD 592
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 86.7 bits (213), Expect = 3e-16
Identities = 94/406 (23%), Positives = 164/406 (40%), Gaps = 61/406 (15%)
Query: 630 SHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIK---EEVKQQPSILVGGTLK- 685
S+ + E +ED N D+ + E I+ E VKQ SI+ G L
Sbjct: 877 SNWNIVENTEDTSSTANDLSMQDEFHISNMHAAEDQEQIRALLENVKQSESIIDGEALTP 936
Query: 686 --------EYQLKGLQWMVSLFNN-HLNGILADEMGLGKTIQTISLLTYLYEAKGVHGPF 736
++Q GL W++ + N+ G+LAD+MGLGKTIQ I+L+ +
Sbjct: 937 EDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTN 996
Query: 737 LVIVPLSTLTNWNAEFDKWAPKLRKIA--FKGPPMERKPKQALIKNREFDVVLTTFEYII 794
L++ P+S L W E + K K G K K R +D VL +++ +
Sbjct: 997 LIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLAR-YDAVLVSYQTLA 1055
Query: 795 KE---------------------RPLLSKIK---------------WVHTIIDEGHRMKN 818
E L+++K + ++DEG +KN
Sbjct: 1056 NEFKKHWPKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYRILLDEGQNIKN 1115
Query: 819 AQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFA 878
++ S T + YR +L+GTP+QN++ EL++L+ F+ ++ + F F
Sbjct: 1116 KNTRASKACCT-INGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQ 1174
Query: 879 NTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEK-----DLPDKVEKVLKCKMS 933
+ E+ +R++ +L +LRR K D +LP K+ +V + ++
Sbjct: 1175 R---NKQYQYDNEDRKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLK 1231
Query: 934 ALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNH 979
+ K Y + + +N S +++LR+ C H
Sbjct: 1232 GEELKFYTALESKNQALAKKLLNNSTRGSYSSVLTLLLRLRQACCH 1277
Score = 80.5 bits (197), Expect = 2e-14
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 22/240 (9%)
Query: 920 LPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQIMQLRKICNH 979
+P K + L + + HKLY Q++ F +D + S M+ +KI
Sbjct: 1380 IPCKDCQRLTNEKDIVSHKLYDQVINQG--FTEEDLHAEYLSE--------MEKQKI-QQ 1428
Query: 980 PFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMED 1039
V+ + + P+ + I ++++R+ + + +++IF Q T +I+E
Sbjct: 1429 KNVYVPNFESLEPSTKIEQCI-------QVIQRVFDE--SATEKIIIFSQFTTFFEILEH 1479
Query: 1040 FLRY-LDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVII 1098
FL+ L+ YL+ G + R+ ++N F + + L+S +AG GL L A+ V+I
Sbjct: 1480 FLKNKLNFPYLKYIGSMNAQRRSDVINEFYR-DPEKRILLISMKAGNSGLTLTCANHVVI 1538
Query: 1099 FDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
D WNP+ + QAQDR +RI Q +V++ +L +SVE+ I + K ++ + GK
Sbjct: 1539 VDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGK 1598
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 86.7 bits (213), Expect = 3e-16
Identities = 95/375 (25%), Positives = 159/375 (42%), Gaps = 32/375 (8%)
Query: 774 KQALIKNREFDVVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHS 833
K +++ + D L I+ RP L ++DE H +N +S + TL+ +
Sbjct: 159 KTKMVREVKPDKELDDIREILMGRPGL-------LVLDEAHTPRNQRSCIWKTLSKV-ET 210
Query: 834 DYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEET 893
R++L+GTP QNN EL +L PK + S + G ++ L E
Sbjct: 211 QKRILLSGTPFQNNFLELCNVLGLARPKYLERLTSTLKKSGMTVTKRGKKN---LGNEIN 267
Query: 894 LLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQM-LKHRRLFIF 952
I L V+ PF+ ++ LP E V+ LQ ++ + + + H R
Sbjct: 268 NRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKN 327
Query: 953 DDSSNQKFSSSRGFNNQIMQLRKICNHP--FVFEEVEDQINPAR-ETNDTIWRSAGKFEL 1009
+ K S + ++ KI + E + Q+ R + N ++ K
Sbjct: 328 VFETEHKLSLV-SVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSV-----KTRF 381
Query: 1010 LERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKY--------LRLDGHTKSDDRT 1061
L + + +VL+F +Q +D ++ +++L ++ L + G + R
Sbjct: 382 LMEFVELCEVIKEKVLVF---SQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQ 438
Query: 1062 ALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1121
L+N FN P S FL ST+A G++L A VI+ D WNP + QA RA+RIGQK
Sbjct: 439 TLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQK 498
Query: 1122 NEVRILRLITDNSVE 1136
V L+ + E
Sbjct: 499 RIVYTYHLVAKGTPE 513
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 83.2 bits (204), Expect = 3e-15
Identities = 47/147 (31%), Positives = 81/147 (54%), Gaps = 4/147 (2%)
Query: 1008 ELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTF 1067
E++E I+ K + +V+I Q T V++++E ++ KY + G DR +++F
Sbjct: 924 EIVENIMEKKE----KVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSF 979
Query: 1068 NAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1127
N LLS AGG+GLNL + +++ D WNP + QA DR +R+GQK +V I
Sbjct: 980 NREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIH 1039
Query: 1128 RLITDNSVEEAILDKAHAKLDIDGKVI 1154
RL+T ++E+ ++ K+ + V+
Sbjct: 1040 RLVTKGTIEQRVVMLQKDKVALASSVL 1066
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 82.8 bits (203), Expect = 4e-15
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Query: 1021 GHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLS 1080
G + ++F Q T+++D++E L+ ++Y R DG R A + FN D ++S
Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTL-PDVSVMIMS 1130
Query: 1081 TRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
+A LGLN+ A VI+ D WNP + QA DRAHRIGQ V+++R ++VE+ IL
Sbjct: 1131 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRIL 1190
Score = 73.2 bits (178), Expect = 3e-12
Identities = 79/368 (21%), Positives = 148/368 (39%), Gaps = 78/368 (21%)
Query: 676 PSILVGGTLKEYQLKGLQWMV---SLFNNHLNGILADEMGLGKTIQTISLLT------YL 726
P ++ +L +Q L WM + N GILAD+ GLGKT+ TI+L+ YL
Sbjct: 534 PDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYL 593
Query: 727 ---------------------YEAKGVHGPF-----------LVIVPLSTLTNWNAEFDK 754
E K V L++ P S + W E K
Sbjct: 594 PCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRK 653
Query: 755 WAP---KLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKERPL-----------L 800
L + + G + P + ++DVV+TT+ + K + + L
Sbjct: 654 KVTLEAHLSVLVYHGCSRTKDPHELA----KYDVVITTYSLVSKRKHMDCEPVEFLSGPL 709
Query: 801 SKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLP 860
+++ W ++DE +KN +++ S+ + H+ R L+GTP+QN++ +L++ F+
Sbjct: 710 AQVSWFRVVLDEAQSIKNYKTQASIACSGL-HAKRRWCLSGTPIQNSIADLYSYFRFLKY 768
Query: 861 KIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEK-- 918
++S ++F E P ++ G+ + L +L+ +LRR K +
Sbjct: 769 DPYSSYQTFCETIKNPISSYPGEG------------YKTLQAILKKVMLRRTKDTLLDGK 816
Query: 919 ---DLPDKVEKVLKCKMSALQHKLYQQM-LKHRRLFIFDDSSNQKFSSSRGFNNQIMQLR 974
LP K ++ + + + Y ++ R F + + +++LR
Sbjct: 817 PVISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLR 876
Query: 975 KICNHPFV 982
+ C HP +
Sbjct: 877 QACGHPLL 884
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 82.4 bits (202), Expect = 5e-15
Identities = 78/325 (24%), Positives = 137/325 (42%), Gaps = 66/325 (20%)
Query: 639 EDNVGDKNGADSDDDLER----ERIDYYEVAHSIKEEV--KQQPSILVGGTLKEYQLKGL 692
+D + +G+D + E+ ER+ Y +K+ K P ++ L +Q L
Sbjct: 2 DDTMDMSSGSDEEVQEEKTTVNERVIYQAALQDLKQPKTEKDLPPGVLTVPLMRHQKIAL 61
Query: 693 QWM---VSLFNNHLNGILADEMGLGKTIQTISLL--------TYLYEAKGVH-GPFLVIV 740
WM + L GILAD+ GLGKTI TISL+ + + KG + G L++
Sbjct: 62 NWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVC 121
Query: 741 PLSTLTNWNAEFDKWAP---KLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKER 797
P S + W E + KL + G + P + I +DVV+TT+ + E
Sbjct: 122 PASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAI----YDVVMTTYAIVTNEV 177
Query: 798 P----------------------------LLSKIKWVHTIIDEGHRMKNAQSKLSLTLNT 829
P L +++W+ ++DE H +KN ++ ++ +
Sbjct: 178 PQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFS 237
Query: 830 YYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALS 889
+ R LTGTP++N + +L++ F+ + SF + P
Sbjct: 238 -LRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPI------------ 284
Query: 890 EEETLLVIRRLHKVLRPFLLRRLKK 914
+++ L ++L +LR +LRR K+
Sbjct: 285 DKKPLHGYKKLQAILRGIMLRRTKE 309
Score = 65.9 bits (159), Expect = 5e-10
Identities = 35/72 (48%), Positives = 44/72 (60%)
Query: 1078 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
L+S +AG LGLN+ A VI+ D WNP + QA DRAHRIGQ V + R+ N+VEE
Sbjct: 511 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEE 570
Query: 1138 AILDKAHAKLDI 1149
IL K +I
Sbjct: 571 RILTLHERKRNI 582
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 82.0 bits (201), Expect = 7e-15
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
+ ++F Q T +D++ L + ++L G R +N F + D FL+S +
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKE-DPDCRVFLMSLK 740
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
AGG+ LNL A V + D WNP + QAQDR HRIGQ +R++R I +N+VEE IL
Sbjct: 741 AGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERIL 798
Score = 55.5 bits (132), Expect = 7e-07
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 625 KDKIESHLDTQELSEDNVGDKNGADSDDDLERERIDYYEVAHSIKEEVKQQPSILVGGTL 684
K+K+ +T E +++ D++ ++ D DL++ +++ E + PS L+ L
Sbjct: 90 KEKVVLLWETWEKEQNSWIDEHMSE-DVDLDQH--------NAVIAETAEPPSDLIMPLL 140
Query: 685 KEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEAKGVH-----GPFLVI 739
+ YQ + L W + GILADEMG+GKTIQ ISL+ E G LV+
Sbjct: 141 R-YQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVL 199
Query: 740 VPLSTLTNWNAEFDKWAP--KLRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYIIKE 796
PL ++ W E ++ + + + G + K+ + +D VLTT+ + E
Sbjct: 200 CPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNIKEFM----NYDFVLTTYSTVESE 254
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 80.9 bits (198), Expect = 1e-14
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 1004 AGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYL------------------- 1044
+ K LL I+ K + G ++L+F Q + + +++ L Y+
Sbjct: 946 SNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWFADGHEALNAEGE 1005
Query: 1045 -------DMKYLRLDGHTKSDDRTALLNTFNAP-NSDYFCFLLSTRAGGLGLNLQTADTV 1096
Y+ +DG +S R A+ +FN P N L+STRAG LG N+ A+ V
Sbjct: 1006 ETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAANRV 1065
Query: 1097 IIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVI 1154
IIFD WNP D Q+ R +R GQ V I R I ++EE I + K +V+
Sbjct: 1066 IIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVV 1123
Score = 75.9 bits (185), Expect = 5e-13
Identities = 87/320 (27%), Positives = 131/320 (40%), Gaps = 73/320 (22%)
Query: 684 LKEYQLKGLQWMVSLFNNHLN--------GILADEMGLGKTIQTISLL--TYLYEAKGVH 733
LK +Q G+Q+M L+ GILA MGLGKT+Q I+ L ++E G
Sbjct: 463 LKPHQAHGIQFMYDCAFESLDRLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEK 522
Query: 734 GP-FLVIVPLSTLTNWNAEFDKW------------------------------------A 756
LV+VP + + NW EF KW
Sbjct: 523 CKRVLVVVPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTIEDRRRALKAWHSSKT 582
Query: 757 PKLRKIAF--------KGPPMERKPKQALIKNREFDVVLTTF-EYIIKERPLLSKIKWVH 807
P + I + + P ++KPK +NR + F +Y+ P +
Sbjct: 583 PSVMIIGYDLFRILTVEDDPKKKKPKN---RNRRLEKAKEDFRKYLQNPGPDM------- 632
Query: 808 TIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVK 867
+ DE H++KN S LS + + R+ LTGTPLQNNL E ++NFV P + +
Sbjct: 633 VVCDEAHKLKNDDSALSKCMVKIL-TKRRICLTGTPLQNNLMEYHCMVNFVKPGLLGTKT 691
Query: 868 SFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKV---LRPFLLRRLKKDVEKDLPDKV 924
F F G+ K A S E + RR H + L+ + R+ + + + +P K
Sbjct: 692 EFANRFVNII--NRGRTKDA-SPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQ 748
Query: 925 EKVLKCKMSALQHKLYQQML 944
E V+ + + Q LY L
Sbjct: 749 EYVINVRQTERQCALYNAFL 768
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 80.9 bits (198), Expect = 1e-14
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 990 INPARETNDTIWRSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYL 1049
+NP I SA +++++ T ++++ Q + I+ L+ L + L
Sbjct: 776 LNPQNPIFQFIRPSAKLKMVIDKLEELLTGTNDKIIVTSQWVSYLAIVRKRLQDLSWETL 835
Query: 1050 RLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1109
+G + +R +L FNA N++ LLS AGG+GLNL A+ ++I D WNP +
Sbjct: 836 DFNGQLTAKEREIVLRDFNA-NNEKRVLLLSLTAGGVGLNLNVANHMLIVDLHWNPQLER 894
Query: 1110 QAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDI 1149
QAQDR +R GQ I R + ++VE+ I KL+I
Sbjct: 895 QAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQDCKLEI 934
Score = 67.0 bits (162), Expect = 2e-10
Identities = 58/236 (24%), Positives = 107/236 (44%), Gaps = 47/236 (19%)
Query: 737 LVIVPLSTLTNWNAEFDKWAPK--LRKIAFKGPPMERKPKQALIKNREFDVVLTTFEYII 794
LV+ P+S + W E + +R + F GP +A R +D+V+T++ ++
Sbjct: 393 LVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAF---RSYDLVITSYNLVV 449
Query: 795 KE-------RPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNN 847
E PL + + W I+DE H ++N+++ ++ + LTGTP+QN
Sbjct: 450 NELKRYGNTSPLFA-VYWNRVILDEAHIIRNSKTNCCNSV-CQLRAHCHWALTGTPVQNR 507
Query: 848 LPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPF 907
+++ALL FV F ++ + + N E++L RRL+ +++P
Sbjct: 508 GVDVFALLRFVNVPNFQDLQQWKKNLN-----------------ESMLGHRRLNFIIKPL 550
Query: 908 LLRRLKKDVEK--DLP--------------DKVEKVLKCKMSALQHKLYQQMLKHR 947
+LRR K+ ++ D+P K E + +SA+ K++ Q L R
Sbjct: 551 MLRRTKQKLQASGDMPALPSLKIELICVQLSKTEMAVYQILSAISKKIFTQFLLQR 606
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 79.7 bits (195), Expect = 3e-14
Identities = 34/61 (55%), Positives = 46/61 (74%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKLRKIAFK 765
ILADEMGLGKTIQ IS L+YL+ ++GPFL++VPLST+T+W EF+ W K+ + +
Sbjct: 33 ILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMNVVVYI 92
Query: 766 G 766
G
Sbjct: 93 G 93
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 79.0 bits (193), Expect = 6e-14
Identities = 50/162 (30%), Positives = 82/162 (49%), Gaps = 12/162 (7%)
Query: 1002 RSAGKFELLERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRT 1061
+ A E++ IL K + +V+I Q T V++++E ++ Y + G DR
Sbjct: 841 KMAKTLEVVREILEKKE----KVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQ 896
Query: 1062 ALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1121
+++FN LLS AGG+GLNL + +I+ D WNP + QA DR +R+GQK
Sbjct: 897 ERVDSFNQEKGGAQVMLLSLTAGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQK 956
Query: 1122 NEV--------RILRLITDNSVEEAILDKAHAKLDIDGKVIQ 1155
EV + RLI ++E+ ++D KL + V++
Sbjct: 957 KEVFIHRLNISKFCRLIVKGTIEQRVMDLQEKKLALAASVLE 998
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 79.0 bits (193), Expect = 6e-14
Identities = 114/487 (23%), Positives = 195/487 (39%), Gaps = 74/487 (15%)
Query: 706 ILADEMGLGKTIQTISLLTYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKW-APKLRKIAF 764
ILA G GKT IS L P LV++P + +W EF W K+ + F
Sbjct: 289 ILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVLPKGIIESWKREFTLWEVEKIPLLDF 347
Query: 765 KGPPMERKPKQAL-----IKNR--------EFDVVLT--TFEYIIKERPLLSKIKWVHTI 809
E + +Q IK R +F ++ FE ++ L+ K I
Sbjct: 348 YSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLI 407
Query: 810 IDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVLPK-------- 861
+DEGH +N ++ + +L + +++LTGT QNN+ E++ +L+ V PK
Sbjct: 408 LDEGHTSRNKETYMLSSL-ARVKTRRKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTR 466
Query: 862 -IFNSVKSFDEWFNTPFANTGGQD---------KIALSEEETLLVIRRLHKVLRPF---L 908
I + + S E N ++ L L K LR +
Sbjct: 467 EIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQRSTNFSAKASLIKDLREMTRNI 526
Query: 909 LRRLKKDVEKDLPDKVEKVLKCKMSALQH---------KLYQQMLKHRRLFIFDDSSN-- 957
L K D LP E + +S++Q +L++Q+ L+I +
Sbjct: 527 LHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVKGLRKMELFKQISLGAALYIHPKLKSFL 586
Query: 958 --QKFSSSRGFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILP 1015
+ +GF++ + K+ +++ +IN R K + +L
Sbjct: 587 EENPSNGEKGFSDNNTTVMKL-------DKMLKKINV---------RDGVKMKFFLNLLA 630
Query: 1016 KFKATGHRVLIFFQMTQVMDIMEDFLR-----YLDMKYLRLDGHTKSDDRTALLNTFNAP 1070
++TG ++L+F Q + +E + L + + G + ++ R + FN
Sbjct: 631 LCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFN-N 689
Query: 1071 NSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLI 1130
+ + F S +A G G++L A V+I D NP QA RA+R GQK +V +L+
Sbjct: 690 SLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLV 749
Query: 1131 TDNSVEE 1137
+S EE
Sbjct: 750 AADSPEE 756
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 77.8 bits (190), Expect = 1e-13
Identities = 119/485 (24%), Positives = 195/485 (39%), Gaps = 88/485 (18%)
Query: 706 ILADEMGLGKTIQTISLL-TYLYEAKGVHGPFLVIVPLSTLTNWNAEFDKWAPKL----- 759
I++ + G GKT T+ L +YL H +VI P + + W E KW +
Sbjct: 613 IISHKAGTGKTRLTVVFLQSYLKRFPNSHP--MVIAPATLMRTWEDEVRKWNVNIPFYNM 670
Query: 760 -----------------------------------RKIAFKGPPMERKPKQALIKNREFD 784
++ + G K A KN E
Sbjct: 671 NSLQLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEG- 729
Query: 785 VVLTTFEYIIKERPLLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPL 844
+ F ++ E P L ++DEGH +N QS L + T ++ R+ L+GT
Sbjct: 730 --MQVFRRMLVELPGL-------LVLDEGHTPRN-QSSLIWKVLTEVRTEKRIFLSGTLF 779
Query: 845 QNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVL 904
QNN EL +L P +++ S + + G ++ EE +V L ++
Sbjct: 780 QNNFKELSNVLCLARPADKDTISSRIHELSK-CSQEGEHGRV---NEENRIV--DLKAMI 833
Query: 905 RPFLLRRLKKDVEKDLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSR 964
F+ +++ LP + V+ Q K+ ++ + F F+ K S+
Sbjct: 834 AHFVHVHEGTILQESLPGLRDCVVVLNPPFQQKKILDRIDTSQNTFEFE----HKLSAV- 888
Query: 965 GFNNQIMQLRKICNHPFVFEEVEDQINPARETNDTIWRSAGKFELLERILPKF-----KA 1019
+ +C +P E++ I PA T T+ R K+E E + KF +
Sbjct: 889 ----SVHPSLYLCCNPTKKEDLV--IGPA--TLGTLKRLRLKYE--EGVKTKFLIDFIRI 938
Query: 1020 TG---HRVLIFFQMTQVMD-IMEDFLRYLDM----KYLRLDGHTKSDDRTALLNTFNAPN 1071
+G +VL++ Q + IME + D + L + G + DR +++ FN P+
Sbjct: 939 SGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPD 998
Query: 1072 SDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT 1131
S L ST+A G++L A V+I D WNP + QA RA RIGQK V I L+
Sbjct: 999 SGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMV 1058
Query: 1132 DNSVE 1136
++ E
Sbjct: 1059 KDTSE 1063
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 77.0 bits (188), Expect = 2e-13
Identities = 43/123 (34%), Positives = 68/123 (54%), Gaps = 1/123 (0%)
Query: 1018 KATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCF 1077
K G + ++F Q T++++++E L ++Y RLDG R + FN +
Sbjct: 1127 KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEVTVM 1185
Query: 1078 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
++S +A LGLN+ A V++ D WNP + QA DRAHRIGQ V ++R ++VE+
Sbjct: 1186 IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVED 1245
Query: 1138 AIL 1140
IL
Sbjct: 1246 RIL 1248
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 75.5 bits (184), Expect = 6e-13
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
+ +IF Q T ++D++E L +++ RLDG R + F+ + D ++S +
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSN-DPDVKVMIMSLK 961
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
AG LGLN+ A VI+ D WNP + QA DRAHRIGQ V + R+ N+VE+ IL
Sbjct: 962 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRIL 1019
Score = 51.6 bits (122), Expect = 1e-05
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 800 LSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVL 859
L+K+ W ++DE +KN +++++ + R L+GTP+QN + +L++ F+
Sbjct: 541 LAKVGWFRVVLDEAQTIKNHRTQVARAC-CGLRAKRRWCLSGTPIQNTIDDLYSYFRFLK 599
Query: 860 PKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEK- 918
+ KSF P + +L ++L VLR +LRR K +
Sbjct: 600 YDPYAVYKSFCHQIKGPIS------------RNSLQGYKKLQAVLRAIMLRRTKGTLLDG 647
Query: 919 ----DLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQ----- 969
+LP K + + S + Y ++ D S K ++ G NQ
Sbjct: 648 QPIINLPPKTINLSQVDFSVEERSFYVKLES-------DSRSQFKAYAAAGTLNQNYANI 700
Query: 970 ---IMQLRKICNHP 980
+++LR+ C+HP
Sbjct: 701 LLMLLRLRQACDHP 714
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 74.3 bits (181), Expect = 1e-12
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
+ +IF Q T ++D++E + +++ RLDG R + F+ D L+S +
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSK-KPDVKVMLMSLK 952
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
AG LGLN+ A VI+ D WNP + QA DRAHRIGQ V + R+ ++VE+ IL
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRIL 1010
Score = 56.2 bits (134), Expect = 4e-07
Identities = 46/194 (23%), Positives = 84/194 (42%), Gaps = 33/194 (17%)
Query: 800 LSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLPELWALLNFVL 859
L K+ W ++DE +KN +++++ + T + R L+GTP+QN + +L++ F+
Sbjct: 537 LGKVGWFRIVLDEAQTIKNYRTQMARSCCTL-RAKRRWCLSGTPIQNTIDDLYSYFRFLR 595
Query: 860 PKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLLRRLKKDVEK- 918
+ KSF P + Q ++L VLR +LRR K +
Sbjct: 596 YDPYAVYKSFYSTIKVPISRNSCQG------------YKKLQAVLRAIMLRRTKGTLLDG 643
Query: 919 ----DLPDKVEKVLKCKMSALQHKLYQQMLKHRRLFIFDDSSNQKFSSSRGFNNQ----- 969
+LP KV + + S + Y+++ D S K + G +Q
Sbjct: 644 KPIINLPPKVVNLSQVDFSVAERSFYKKLEA-------DSRSQFKAYADAGTLSQNYANI 696
Query: 970 ---IMQLRKICNHP 980
+++LR+ C+HP
Sbjct: 697 LLLLLRLRQACDHP 710
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 72.8 bits (177), Expect = 4e-12
Identities = 39/108 (36%), Positives = 58/108 (53%)
Query: 1048 YLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQ 1107
Y + G DR +++FN LLS AGG+GLNL + +I+ D WNP
Sbjct: 382 YTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWNPAL 441
Query: 1108 DLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQ 1155
+ QA DR +R+GQK EV I RLI ++E+ ++ KL + V++
Sbjct: 442 EQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLE 489
Score = 54.7 bits (130), Expect = 1e-06
Identities = 54/182 (29%), Positives = 81/182 (43%), Gaps = 19/182 (10%)
Query: 684 LKEYQLKGLQWMVSLFNN-HLNGILADEMGLGKTIQTISLLTYLYEAKGVH--GPFLVIV 740
L +Q GL W++ + H GIL +MGLGKT+ ISL+ + A+ I
Sbjct: 144 LMPHQKAGLCWLLWRESQPHSGGILGGDMGLGKTLSMISLIVHQKAARKTRKDAGDDAIA 203
Query: 741 PLSTLTNWNAEFDKWAPK--LRKIAFKGPPMERKPKQALIKNREFDVVL-TTFEYIIKER 797
P S + +W AE + + L + + G PK L K+ E D L K R
Sbjct: 204 PESLVHHWEAEIARRLKQDLLSVLVYHGNRRHINPKD-LKKHIELDYDLEDEHNPCSKLR 262
Query: 798 PL-----------LSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQN 846
P L++I W + I+DE H +KN ++ S + R L+GTP+ N
Sbjct: 263 PRVCPKADKNSSPLARIAWSYVILDEAHIIKNRNAQCS-EAACKISAFSRWCLSGTPIHN 321
Query: 847 NL 848
N+
Sbjct: 322 NM 323
>7301208 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 1654
Score = 70.1 bits (170), Expect = 3e-11
Identities = 38/105 (36%), Positives = 62/105 (58%), Gaps = 1/105 (0%)
Query: 1401 ISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNV 1460
I +K + Y V Y + +RR ++F+ KP +++YPDYY +I+ P + +I +
Sbjct: 512 IKKKILSIQKYLVDY-SLGNRRPIEMFMEKPPRKIYPDYYDIIQNPIDMNTIEHNIRTDR 570
Query: 1461 YDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELEDAVIAKWKE 1505
Y +++ VV D+ L+F+N R YN E S I+ D+ LE A+ K KE
Sbjct: 571 YAAVEDVVSDYRLMFSNCRQYNEEGSNIYEDANILERALNEKLKE 615
Score = 62.8 bits (151), Expect = 4e-09
Identities = 34/101 (33%), Positives = 55/101 (53%), Gaps = 1/101 (0%)
Query: 1401 ISQKARELYDYAVYYRNADDRR-LSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLN 1459
I+++ + Y+ Y+ +R LS IF PSK YPDYY +I+ P + + + +
Sbjct: 641 ITERLWQFYETVKEYQEPKGKRQLSLIFTKLPSKSEYPDYYDIIREPIDMDRIAQKLKQG 700
Query: 1460 VYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELEDAVI 1500
YD+L + DF L+ NA YN DS I++D+L L+ +
Sbjct: 701 AYDTLDDLAADFLLMLENACKYNEPDSQIYKDALVLQQLTL 741
Score = 55.5 bits (132), Expect = 7e-07
Identities = 26/77 (33%), Positives = 45/77 (57%)
Query: 1420 DRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANAR 1479
DR + +F + PSK++YPDYY +I++P + I +N Y SL ++ D + NA
Sbjct: 211 DRLMHRMFQLLPSKKIYPDYYDVIEHPIDLRLIATKIQMNAYSSLAEMERDLLQMTKNAC 270
Query: 1480 IYNTEDSIIFRDSLELE 1496
++N S I++D+ L+
Sbjct: 271 LFNEPGSQIYKDAKSLK 287
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 66.6 bits (161), Expect = 3e-10
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 1047 KYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPH 1106
+Y+R+DG S +R L+N F + D +LS +A G GL A V+ + W+P
Sbjct: 112 RYIRIDGSVSSSERIHLVNQFQK-DPDTRVAILSIQAAGQGLTFTAASHVVFAELYWDPG 170
Query: 1107 QDLQAQDRAHRIGQKNEVRILRLITDNSVEEAILDKAHAKLDIDGKVIQAGK 1158
QA+DRAHRIGQ + V I LI + +++ + + K + G + K
Sbjct: 171 HIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRK 222
>SPBC1734.15 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 542
Score = 64.7 bits (156), Expect = 1e-09
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 1416 RNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIF 1475
++ R L DIF+ PSKRLYPDYY +IK P + + K Y +L+ V+D + +F
Sbjct: 159 KDEQGRFLIDIFIDLPSKRLYPDYYEIIKSPMTIKMLEKRFKKGEYTTLESFVKDLNQMF 218
Query: 1476 ANARIYNTEDSIIFRDS---LELEDAVIAKWKE 1505
NA+ YN S ++ D+ +L ++I+ + E
Sbjct: 219 INAKTYNAPGSFVYEDAEKLSQLSSSLISSFSE 251
>SPBC4B4.03 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 803
Score = 63.5 bits (153), Expect = 2e-09
Identities = 30/97 (30%), Positives = 55/97 (55%)
Query: 1396 KERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKH 1455
K + +A+ + YR+ R+L F P R++P+YY I+ P A E + K
Sbjct: 206 KPLSSLEARAKVIMRQVRRYRDGSGRQLFAPFERLPDPRMFPEYYQAIEQPMALEVIQKK 265
Query: 1456 IDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDS 1492
+ + Y++++Q V+DF+L+F NA+ +N S ++RD+
Sbjct: 266 LSKHRYETIEQFVDDFNLMFDNAKSFNDPSSQVYRDA 302
>CE23294 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 540
Score = 62.4 bits (150), Expect = 5e-09
Identities = 127/557 (22%), Positives = 213/557 (37%), Gaps = 97/557 (17%)
Query: 644 DKNGADSDDDLERERIDYYEVAHSIKEEVKQQP-------SILVGGTLKEYQLKGLQWMV 696
++NG + +D+ ++ ++ K+++K++P + L +Q WM+
Sbjct: 4 NENGENLNDEFDKCTLED-------KKDIKKEPCQDATPNGFVADFRLMPHQEAARDWMI 56
Query: 697 SL-FNNHLNGILADEMGLGKTIQTISLLT----------YLYEAKGVHGPFLVIVPLSTL 745
GIL G GKT I+L+ +E K P L+IVP +
Sbjct: 57 DREAQEPSGGILGLAHGQGKTAIVIALILDQKIKCASNDKKFEQKS---PTLIIVPKRII 113
Query: 746 TNWNAEFDKWAPKLRKIA------FKGPPMERKPKQALIKNREFDVVLTTFEYI-IKERP 798
W +D++ +L + A + E + + + +++DVVLTT+ + +KE+
Sbjct: 114 YQW---YDEFKDRLEENALSVYLYYDDEFSEARKNISASELQKYDVVLTTYRNVPVKEKD 170
Query: 799 ---------LLSKIKWVHTIIDEGHRMKNAQSKLSLTLNTYYHSDYRLILTGTPLQNNLP 849
+L IKW ++DE H ++++ +K S + T S R +T P QN+
Sbjct: 171 ETGEKVSKQVLQNIKWTRIVLDEAHNIRDSNTKKSTAIAT-LASKNRWCVTAAPFQNS-- 227
Query: 850 ELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIALSEEETLLVIRRLHKVLRPFLL 909
W + N +L F K F E P K+ +E T+ + R + V +
Sbjct: 228 -EWDICNLIL---FLGNKPFGENVKGPEKTPENLKKL---KESTMELFRGNNLVFNSIIN 280
Query: 910 RRLKKDVEKDLPDKVEKVLK--CK-------MSALQ------HKLYQQMLKHRRLFIFDD 954
EK D +E K CK ++ LQ H L + + + F D
Sbjct: 281 TGELSANEKKAYDIIEDAHKRFCKKGQSLKLLAMLQQASIHFHNLAPEEPLKKAMDKFMD 340
Query: 955 SSNQKFSSSRGFNNQIMQLRKIC--NHPFVFEEVEDQINPARE--TNDTIWRSAGKFELL 1010
+ + FN C + FE + A+E T T + K E L
Sbjct: 341 EEEKFKEEEKSFNMAEKNFETACSDDEKQAFESAKTTFETAKEKFTKATEEYTFSK-ETL 399
Query: 1011 ERILPKFKATGHRVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAP 1070
+ + K G I Q ++ DI R + + K + T +
Sbjct: 400 KNV-AKLAKNGQFPKI-GQFPEIFDIKHPNARITKTINIIQEVLMKKEKVTVSV------ 451
Query: 1071 NSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL- 1129
LS RAG +NL A VI+ WN + +A I QKN V I R+
Sbjct: 452 ------VFLSERAG--AINLHGATHVILLGMHWNLALEQEACSCVCNIAQKNIVTIHRIK 503
Query: 1130 ---ITDNSVEEAILDKA 1143
++ VE+A DK+
Sbjct: 504 VAGTNEDDVEKAQDDKS 520
>YLR357w [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 889
Score = 60.1 bits (144), Expect = 3e-08
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 1389 DNATKTLKERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAA 1448
DN+ + + + + R+ Y+ + +S IF V P K+ YPDYY +IK P +
Sbjct: 5 DNSNSSTQNSSALYKDLRKEYESLFTLKEDSGLEISPIFNVLPPKKDYPDYYAVIKNPVS 64
Query: 1449 FENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELE 1496
F + K I Y +Q + D I NA+ YNT DS I++ +L LE
Sbjct: 65 FNTLKKRIP--HYTDAQQFMNDVVQIPWNAKTYNTRDSGIYKYALVLE 110
>CE05310 [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 1879
Score = 59.3 bits (142), Expect = 5e-08
Identities = 27/82 (32%), Positives = 49/82 (58%)
Query: 1427 FLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDS 1486
F+ PS + YP+YY +I+ P + + ID + Y + ++ D ++F+NAR +N S
Sbjct: 560 FIQLPSAKQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRS 619
Query: 1487 IIFRDSLELEDAVIAKWKEMTN 1508
+I D+++LE AV+ ++ M N
Sbjct: 620 MIHMDAIQLEKAVLRAYEGMRN 641
Score = 55.1 bits (131), Expect = 9e-07
Identities = 39/123 (31%), Positives = 63/123 (50%), Gaps = 6/123 (4%)
Query: 1389 DNATKTLKERQEISQKARELYDYAVYYRNA---DDRR--LSDIFLVKPSKRLYPDYYLLI 1443
+N ++ +E +E + ++ RNA DR L+D FL PSK YPDYY I
Sbjct: 325 ENFSEDSEEDEETETNSEPMWKLYWTIRNAVHEKDRNVTLADNFLELPSKESYPDYYDEI 384
Query: 1444 KYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELEDAVIAKW 1503
K P + + K + YD LK +V D +++NA YN E S ++ + +L+ I+
Sbjct: 385 KNPVSIFMINKRLKNGKYD-LKSLVADLMQMYSNAFDYNLESSEVYISAEKLKALTISTC 443
Query: 1504 KEM 1506
K++
Sbjct: 444 KQL 446
Score = 54.3 bits (129), Expect = 1e-06
Identities = 37/130 (28%), Positives = 68/130 (51%), Gaps = 4/130 (3%)
Query: 1378 RKNGRNYLRSADNATKTLK-ERQEISQKARELYDYAVYYRNADDRRLSDIFLVKPSKRLY 1436
R N + + RS ++A L E Q++ + + + D +R L+ F+ PSK +
Sbjct: 690 RINIQQHQRSMEDAIMQLPIEEQKMWRLFKSMKDVR---EEGTNRPLAVNFMRLPSKEEF 746
Query: 1437 PDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLELE 1496
P YY +IK P + ++ Y +L VV DF L+ +NA +N DS I+++++ L+
Sbjct: 747 PAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDSDIYKEAVSLQ 806
Query: 1497 DAVIAKWKEM 1506
A++ +E+
Sbjct: 807 KALLEMKREL 816
>YGR056w [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 928
Score = 57.4 bits (137), Expect = 2e-07
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 1409 YDYAVYYRNADDRRLSDIFLVKPSKRLYPDYYLLIKYPAAFENVMKHIDLNVYDSLKQVV 1468
YD + ++ + + IF V P K+ YPDYY++I+ P + + K L Y S + V
Sbjct: 17 YDAVFHLKDENGIEIYPIFNVLPPKKEYPDYYIIIRNPISLNTLKKR--LPHYTSPQDFV 74
Query: 1469 EDFHLIFANARIYNTEDSIIFRDSLELEDAVIAK 1502
DF I NA YN +DS+I++ ++ LE + K
Sbjct: 75 NDFAQIPWNAMTYNAKDSVIYKYAILLESFIKGK 108
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 57.0 bits (136), Expect = 2e-07
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 1073 DYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITD 1132
D ++S +AGG+GLNL A+ V I D W+ + QA DR HR+GQ+ V + R I
Sbjct: 3 DVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVR 62
Query: 1133 NSVEEAILDKAHAKLDIDG 1151
++VEE +L K I G
Sbjct: 63 DTVEERMLKIQERKNFITG 81
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 55.8 bits (133), Expect = 5e-07
Identities = 37/127 (29%), Positives = 56/127 (43%), Gaps = 10/127 (7%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKS----------DDRTALLNTFNAPNS 1072
+VL+F V+D++E + +R+ G KS + T N+
Sbjct: 1435 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNSHQKEEK 1494
Query: 1073 DYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITD 1132
LL + G GLNL A VI+ + NP + QA R HRIGQ+ + R +
Sbjct: 1495 SIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLVS 1554
Query: 1133 NSVEEAI 1139
+VEE+I
Sbjct: 1555 GTVEESI 1561
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 55.1 bits (131), Expect = 9e-07
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
+V+++ Q T+ + ++ L+ +++L +T + T +N F S C LL+ +
Sbjct: 1381 QVILYSQKTEYLKVIGKVLKLYHIEHLACLSNTANVGET--INNFKRQPS-VTCLLLNVK 1437
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
G GLNL A + + D N +LQA R +RIGQ E + + N+VEE IL
Sbjct: 1438 TLGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDEETFVWNFMIRNTVEENIL 1495
>YKR008w [BK] KOG1827 Chromatin remodeling complex RSC subunit RSC1/Polybromo
and related proteins
Length = 625
Score = 53.1 bits (126), Expect = 3e-06
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 1382 RNYLRSADNATKTLKERQEISQKARELYDYAVYY----RNADDR-RLSDIFLVKPSKRLY 1436
RNYL +++ K L ++ + + A+ +N DD+ +LS+ F+ K
Sbjct: 163 RNYLINSEVKAKLLHYLNKLVDATEKKINQALLGASSPKNLDDKVKLSEPFMELVDKDEL 222
Query: 1437 PDYYLLIKYPAAFENVMKHIDLNVYDSLKQVVEDFHLIFANARIYNTEDSIIFRDSLEL 1495
P+YY ++ P A V +++++ Y + + D L+F NA I+N ++I++D+ L
Sbjct: 223 PEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDPSALIYKDATTL 281
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 52.8 bits (125), Expect = 4e-06
Identities = 34/118 (28%), Positives = 56/118 (46%), Gaps = 7/118 (5%)
Query: 1023 RVLIFFQMTQVMDIMEDFLRYLDMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTR 1082
++++F +Q I+ + R L + ++ + D + F P S+ C L+
Sbjct: 1125 KIIVF---SQWQAILIEIARALSLNGIQFRNKCTNKD----FDDFKNPLSNVTCLLMPLS 1177
Query: 1083 AGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEEAIL 1140
G GLNL A V + + NP + QA R HR GQK ++ R I + ++EE IL
Sbjct: 1178 KGSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENIL 1235
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 52.4 bits (124), Expect = 6e-06
Identities = 31/105 (29%), Positives = 55/105 (51%), Gaps = 1/105 (0%)
Query: 1034 MDIMEDFLRYL-DMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQT 1092
+++ E+ R+ + L L G + +R +++ F P L S A G++L
Sbjct: 1089 LELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTA 1148
Query: 1093 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
A VI+ D++WNP + QA RA R GQ+ V + +L++ ++EE
Sbjct: 1149 ASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEE 1193
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 52.0 bits (123), Expect = 7e-06
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 1035 DIMEDFLRYL-DMKYLRLDGHTKSDDRTALLNTFNAPNSDYFCFLLSTRAGGLGLNLQTA 1093
++ E+ R+ + L L G + +R +++ F P + L S A G++L A
Sbjct: 1096 ELFENIFRWQRGREILTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAA 1155
Query: 1094 DTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITDNSVEE 1137
VI+ D++WNP + QA RA R GQ+ V + +L++ ++EE
Sbjct: 1156 SRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEE 1199
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,935,552
Number of Sequences: 60738
Number of extensions: 3222251
Number of successful extensions: 12314
Number of sequences better than 1.0e-05: 163
Number of HSP's better than 0.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 11215
Number of HSP's gapped (non-prelim): 458
length of query: 1534
length of database: 30,389,216
effective HSP length: 120
effective length of query: 1414
effective length of database: 23,100,656
effective search space: 32664327584
effective search space used: 32664327584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)