ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2117 good F KOG1018 Nucleotide transport and metabolism Cytosine deaminase FCY1 and related enzymes
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2117 750652 750197 -152
(152 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR062w [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 249 1e-66
CE17987 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 62 2e-10
CE01371 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 57 7e-09
At5g28050 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 57 1e-08
Hs18562361 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 54 1e-07
SPCC965.14c [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 52 2e-07
CE19190 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 52 4e-07
ECU09g1960 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 49 2e-06
At1g68720_2 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes 47 7e-06
>YPR062w [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 158
Score = 249 bits (635), Expect = 1e-66
Identities = 117/151 (77%), Positives = 130/151 (85%)
Query: 2 AEWDKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETST 61
++WD+KGMD AYEEAA+GYKEGGVPIGGCLI+N G +LG GHNMRFQKGS TLHGE ST
Sbjct: 8 SKWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEIST 67
Query: 62 LENAGRLKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVGENVNFKSPGEKYLAERGI 121
LEN GRL+G VYK T+YTTLSPCDMCTGAI++YGI R VVGENVNFKS GEKYL RG
Sbjct: 68 LENCGRLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEKYLQTRGH 127
Query: 122 EVKVVDDERCIEIMKDFIAKRPEDWFEDIGE 152
EV VVDDERC +IMK FI +RP+DWFEDIGE
Sbjct: 128 EVVVVDDERCKKIMKQFIDERPQDWFEDIGE 158
>CE17987 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 176
Score = 62.4 bits (150), Expect = 2e-10
Identities = 47/148 (31%), Positives = 72/148 (47%), Gaps = 13/148 (8%)
Query: 5 DKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTLEN 64
D ++KA+E A E VP+G + N G +G G N + G PT H E +
Sbjct: 10 DTAFLEKAFELAQEALDEDEVPVGCVFVVN--GTEIGRGRNRVNETGDPTRHAEMVAVTE 67
Query: 65 AGRLKGS----VYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG-ENVNF---KSPG--EK 114
+ G+ + K T+Y +L PC MC+ A+ GI ++V G EN F +S G EK
Sbjct: 68 MWKEHGTGCEDLLKKSTLYVSLEPCIMCSSAMYQLGIRKMVYGAENPRFGGVRSVGSAEK 127
Query: 115 YLAERGIEVKV-VDDERCIEIMKDFIAK 141
Y E +++ + ER + ++K F K
Sbjct: 128 YRMEDNVQIVAGIWSERSVAMLKTFYEK 155
>CE01371 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 153
Score = 57.4 bits (137), Expect = 7e-09
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 9 MDKAYEEAAIGYKEG-GVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTLENAGR 67
M A EEA G ++G G P G ++ + G+++GSGHNM PT H E + + N +
Sbjct: 4 MKLAIEEAKKGMEKGDGGPFGAVIVKD--GKVIGSGHNMVLVTKDPTAHAEVTAIRNTCK 61
Query: 68 -LKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG 103
+ C +YT+ PC MC GA L + + G
Sbjct: 62 NVDNFDLSGCQLYTSCYPCPMCMGAALWSRVDAIYYG 98
>At5g28050 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 185
Score = 56.6 bits (135), Expect = 1e-08
Identities = 35/101 (34%), Positives = 50/101 (48%), Gaps = 4/101 (3%)
Query: 5 DKKGMDKAYEEAAIGYKEG-GVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTLE 63
D K + +A EEA G G G P G ++ N E++ S HNM + PT H E + +
Sbjct: 30 DHKFLTQAVEEAYKGVDCGDGGPFGAVIVHN--NEVVASCHNMVLKYTDPTAHAEVTAIR 87
Query: 64 NAGRLKGSV-YKHCTMYTTLSPCDMCTGAILLYGIGRVVVG 103
A + + C +Y + PC MC GAI L + R+V G
Sbjct: 88 EACKKLNKIELSECEIYASCEPCPMCFGAIHLSRLKRLVYG 128
>Hs18562361 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 191
Score = 53.5 bits (127), Expect = 1e-07
Identities = 36/119 (30%), Positives = 56/119 (46%), Gaps = 10/119 (8%)
Query: 2 AEWDKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETST 61
AE +K M++A A + VP+G ++ N E++G G N Q + T H E
Sbjct: 19 AEETEKWMEEAMHMAKEALENTEVPVGCLMVYN--NEVVGKGRNEVNQTKNATRHAEMVA 76
Query: 62 LEN-------AGRLKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG-ENVNFKSPG 112
++ +G+ V++H +Y T+ PC MC A+ L I VV G +N F G
Sbjct: 77 IDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCG 135
>SPCC965.14c [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 162
Score = 52.4 bits (124), Expect = 2e-07
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 1 MAEWDKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETS 60
++E D + +A + + EG P G ++D I+ +G+ R G T H ET
Sbjct: 6 LSEKDLAYLREAIKVSQQARDEGQHPFGCIIVDENDNVIMSAGN--RVPDGDVTQHAETR 63
Query: 61 TLENAGRLKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG 103
+ + + + K CT+YT+ PC MC+GAI GI R++ G
Sbjct: 64 AVGLITKTRRDLEK-CTLYTSTEPCAMCSGAIFWSGIRRMIFG 105
>CE19190 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 168
Score = 51.6 bits (122), Expect = 4e-07
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 9 MDKAYEEAAIGYKEG-GVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTLENAGR 67
M +A EA G + G G P G ++D+ G+++ GHNM PT+H E + ++NA +
Sbjct: 18 MAEAVAEACRGVECGDGGPFGAVVVDS-NGKVVAKGHNMVLVTKDPTMHAEMTAIKNACK 76
Query: 68 LKGSV-YKHCTMYTTLSPCDMCTGAIL 93
G+ +YT+ PC MC G L
Sbjct: 77 ALGTFDLSGHILYTSCYPCPMCMGGCL 103
>ECU09g1960 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 150
Score = 49.3 bits (116), Expect = 2e-06
Identities = 37/133 (27%), Positives = 59/133 (43%), Gaps = 10/133 (7%)
Query: 9 MDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTLENAGRL 68
M+ A +EA + VP+G ++ N G ++ HNM SP H E ++ +A
Sbjct: 12 MEMAVKEAMRAFDALEVPVGCVVVRN--GIVVSKSHNMTNANKSPLDHAEVISIRDAD-- 67
Query: 69 KGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVGENVNFKSPGEKYLAERGIEVKVVDD 128
+ T Y T PC MC G +L + V V + G + + GI+ + D
Sbjct: 68 ----CSNSTFYVTCEPCIMCMG--ILGRLKGVEVYYGCRNEVFGSETVCGIGIKSTYLPD 121
Query: 129 ERCIEIMKDFIAK 141
RC EI++ F +
Sbjct: 122 SRCFEILQRFYTR 134
>At1g68720_2 [F] KOG1018 Cytosine deaminase FCY1 and related enzymes
Length = 246
Score = 47.4 bits (111), Expect = 7e-06
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 5 DKKGMDKAYEEAAIGYKEGGVPIGGCLIDNLTGEILGSGHNMRFQKGSPTLHGETSTL-E 63
D+ M +A EA VP+G L+ + G+I+ G+N+ + T H E + E
Sbjct: 49 DEIFMREALVEAKKAADTWEVPVGAVLVHD--GKIIARGYNLVEELRDSTAHAEMICIRE 106
Query: 64 NAGRLKGSVYKHCTMYTTLSPCDMCTGAILLYGIGRVVVG 103
+ L+ T+Y TL PC MC GAIL + +V G
Sbjct: 107 GSKALRSWRLADTTLYVTLEPCPMCAGAILQARVNTLVWG 146
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.140 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,863,201
Number of Sequences: 60738
Number of extensions: 419174
Number of successful extensions: 921
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 913
Number of HSP's gapped (non-prelim): 9
length of query: 152
length of database: 30,389,216
effective HSP length: 97
effective length of query: 55
effective length of database: 24,497,630
effective search space: 1347369650
effective search space used: 1347369650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)