ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2232 good J KOG2298 Translation, ribosomal structure and biogenesis Glycyl-tRNA synthetase and related class II tRNA synthetase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2232 783004 784992 663
(663 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR121c [J] KOG2298 Glycyl-tRNA synthetase and related class II ... 1007 0.0
SPAC3F10.03 [J] KOG2298 Glycyl-tRNA synthetase and related class... 758 0.0
YPR081c [J] KOG2298 Glycyl-tRNA synthetase and related class II ... 676 0.0
7294319 [J] KOG2298 Glycyl-tRNA synthetase and related class II ... 570 e-162
CE29472 [J] KOG2298 Glycyl-tRNA synthetase and related class II ... 563 e-160
Hs6996010 [J] KOG2298 Glycyl-tRNA synthetase and related class I... 563 e-160
At1g29880 [J] KOG2298 Glycyl-tRNA synthetase and related class I... 555 e-158
ECU10g1790 [J] KOG2298 Glycyl-tRNA synthetase and related class ... 450 e-126
At1g29870 [J] KOG2298 Glycyl-tRNA synthetase and related class I... 351 2e-96
At3g44740 [J] KOG2298 Glycyl-tRNA synthetase and related class I... 186 1e-46
>YBR121c [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 667
Score = 1007 bits (2604), Expect = 0.0
Identities = 494/663 (74%), Positives = 558/663 (83%)
Query: 1 MSVEEVQQAKKAVEFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDV 60
MSVE++++A+ AV F+RE LESVL+ RFFYAPAF+LYGGVSGLYDYGPPGC+FQ NI+D
Sbjct: 1 MSVEDIKKARAAVPFNREQLESVLRGRFFYAPAFDLYGGVSGLYDYGPPGCAFQNNIIDA 60
Query: 61 WRKHFVLEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEA 120
WRKHF+LEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMC+D KTGEIFRADHLVEEVLEA
Sbjct: 61 WRKHFILEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCRDLKTGEIFRADHLVEEVLEA 120
Query: 121 RLKGDKEARGLATDXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSG 180
RLKGD+EARGL D LDD VV+EYE+ILAKIDGYSG
Sbjct: 121 RLKGDQEARGLVEDANAAAKDDAEKKKRKKKVKQIKAVKLDDDVVKEYEEILAKIDGYSG 180
Query: 181 AELGELMVKYDIGNPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXX 240
ELGELM KYDIGNPV+G+ LE PRAFNLMFETAIGPSGQ KGYLRPETAQGQ
Sbjct: 181 PELGELMEKYDIGNPVTGETLESPRAFNLMFETAIGPSGQLKGYLRPETAQGQFLNFNKL 240
Query: 241 XXXXXGKTPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDI 300
KTPFASASIGKSFRNEISPR+GLLRVREFLMAEIEHFVDP DKSH +F +IKDI
Sbjct: 241 LEFNNSKTPFASASIGKSFRNEISPRAGLLRVREFLMAEIEHFVDPLDKSHPKFNEIKDI 300
Query: 301 KLKFLPREVQQSGSTVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFR 360
KL FLPR+VQ++GST P+ KTVGEAVA+++VDNETLGYFIARIYQFL+KIGVD +LRFR
Sbjct: 301 KLSFLPRDVQEAGSTEPIVKTVGEAVASRMVDNETLGYFIARIYQFLMKIGVDESKLRFR 360
Query: 361 QHMANEMAHYAADCWDAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPI 420
QHMANEMAHYAADCWD EL+TSYGWIECVGCADRSAYDLTVHS KTKEKLVVR+ L+ PI
Sbjct: 361 QHMANEMAHYAADCWDGELKTSYGWIECVGCADRSAYDLTVHSKKTKEKLVVRQKLDNPI 420
Query: 421 EVTKWEATLVKKLFGPKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGD 480
EVTKWE L KKLFGPKFRKDAPKVE+ LL SQ++L S + LK +GK T+KV+G++G+
Sbjct: 421 EVTKWEIDLTKKLFGPKFRKDAPKVESHLLNMSQDDLASKAELLKANGKFTIKVDGVDGE 480
Query: 481 VEVDDKMVSIEKVTNTEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFP 540
VE+DDK+V IE+ T EH+RE+VP+VIEPSFGIGRIIYS+FEHSFW+RPED AR+VLSFP
Sbjct: 481 VELDDKLVKIEQRTKVEHVREYVPSVIEPSFGIGRIIYSVFEHSFWNRPEDNARSVLSFP 540
Query: 541 PLVAPTKXXXXXXXXXXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPF 600
PLVAPTK +L + +V++ILRK QIPFK+D+SGVSIGKRYARNDELGTPF
Sbjct: 541 PLVAPTKVLLVPLSNHKDLVPVHHEVAKILRKSQIPFKIDDSGVSIGKRYARNDELGTPF 600
Query: 601 GVTIDFDSVTDGSITLRERDSTKQVRGSVADVIKAIREITYQGVSWEEGTKDLAPFNSQA 660
GVTIDF+S D S+TLRERDSTKQVRGSV +VIKAIR+ITY G SWEEGTKDL PF +QA
Sbjct: 601 GVTIDFESAKDHSVTLRERDSTKQVRGSVENVIKAIRDITYNGASWEEGTKDLTPFIAQA 660
Query: 661 ESE 663
E+E
Sbjct: 661 EAE 663
>SPAC3F10.03 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 652
Score = 758 bits (1957), Expect = 0.0
Identities = 378/654 (57%), Positives = 466/654 (70%), Gaps = 4/654 (0%)
Query: 8 QAKKAVEFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRKHFVL 67
+ KA F R E ++K+RFF++P+F++YGG+SGLYDYGPPG + Q+N+VD+WRKHFV+
Sbjct: 3 EVSKAAAFDRTQFEELMKKRFFFSPSFQIYGGISGLYDYGPPGSALQSNLVDIWRKHFVI 62
Query: 68 EEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLKGDKE 127
EE MLEVDC+MLTP+EVLKTSGHVDKF+DWMCKDP TGEIFRADHLVEEVLEARLKGDKE
Sbjct: 63 EESMLEVDCSMLTPHEVLKTSGHVDKFADWMCKDPATGEIFRADHLVEEVLEARLKGDKE 122
Query: 128 ARGLATDXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAELGELM 187
ARG + LDD V+EYE ILA+ID Y G +LGELM
Sbjct: 123 ARG--QNSNDQPEESDDKKKRKKKVKEIRATRLDDKTVEEYEFILAQIDNYDGDQLGELM 180
Query: 188 VKYDIGNPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXXXXGK 247
KYDI NP + +LE PR FNLMFET IGPSG KGYLRPETAQGQ GK
Sbjct: 181 KKYDIRNPATNGELETPRQFNLMFETQIGPSGGLKGYLRPETAQGQFLNFSRLLEFNNGK 240
Query: 248 TPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLKFLPR 307
PFASA +GK+FRNEISPRSGLLRVREFLMAE+EHFVDP +K H RF ++ + L+ LPR
Sbjct: 241 VPFASAMVGKAFRNEISPRSGLLRVREFLMAEVEHFVDPKNKEHDRFDEVSHMPLRLLPR 300
Query: 308 EVQQSGSTVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHMANEM 367
VQ G T LE +G+AV +VDN TLGYF+ARI FL KIG+D R+RFRQHM+NEM
Sbjct: 301 GVQLEGKTDILEMPIGDAVKKGIVDNTTLGYFMARISLFLEKIGIDMNRVRFRQHMSNEM 360
Query: 368 AHYAADCWDAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVTKWEA 427
AHYA DCWDAE+Q SYGWIECVGCADRSAYDL+VHS TK LVV+EAL P+ V ++E
Sbjct: 361 AHYACDCWDAEIQCSYGWIECVGCADRSAYDLSVHSKATKTPLVVQEALPEPVVVEQFEV 420
Query: 428 TLVKKLFGPKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGDVEVDDKM 487
+ +K FGP+F++DA VE ++++ + E SAQL +GKI + V G+E VE D +
Sbjct: 421 EVNRKKFGPRFKRDAKAVEEAMISWPESEKVEKSAQLVAEGKIIVNVNGVEHTVESD--L 478
Query: 488 VSIEKVTNTEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFPPLVAPTK 547
V+IEK +TEHIR + PNVIEPSFG+GRI+Y + EH++W+RPED R VLSFP +AP K
Sbjct: 479 VTIEKRKHTEHIRTYTPNVIEPSFGLGRILYVLMEHAYWTRPEDVNRGVLSFPASIAPIK 538
Query: 548 XXXXXXXXXXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGVTIDFD 607
E + ++S LR I K+D+S +IG+RYARNDELGTPFG+T+DF+
Sbjct: 539 ALIVPLSRNAEFAPFVKKLSAKLRNLGISNKIDDSNANIGRRYARNDELGTPFGLTVDFE 598
Query: 608 SVTDGSITLRERDSTKQVRGSVADVIKAIREITYQGVSWEEGTKDLAPFNSQAE 661
++ + +ITLRERDSTKQVRGS +VI A+ + S+E+ F S E
Sbjct: 599 TLQNETITLRERDSTKQVRGSQDEVIAALVSMVEGKSSFEDALAKFGEFKSTQE 652
>YPR081c [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 618
Score = 676 bits (1744), Expect = 0.0
Identities = 336/642 (52%), Positives = 450/642 (69%), Gaps = 38/642 (5%)
Query: 17 RESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRKHFVLEEDMLEVDC 76
R+ LES L+RRFFY P+FE+YGGVSGL+D GPPGC Q N++ +WR+HF++EE+ML+VD
Sbjct: 9 RDKLESTLRRRFFYTPSFEIYGGVSGLFDLGPPGCQLQNNLIRLWREHFIMEENMLQVDG 68
Query: 77 TMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLKGDKEARGLATDXX 136
MLTPY+VLKTSGHVDKF+DWMC++PKTGE +RADHL+E+ L+ RL DK+
Sbjct: 69 PMLTPYDVLKTSGHVDKFTDWMCRNPKTGEYYRADHLIEQTLKKRLL-DKD--------- 118
Query: 137 XXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAELGELMVKYDIGNPV 196
++ ++ E+IL IDG+SG EL +M +Y+I +PV
Sbjct: 119 -----------------------VNPQDMKNMEKILTTIDGFSGPELNLVMQEYNINDPV 155
Query: 197 SGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXXXXGKTPFASASIG 256
+ D L+ +FNLMFET IG SGQ K +LRPETAQGQ GK PFASASIG
Sbjct: 156 TNDVLDALTSFNLMFETKIGASGQLKAFLRPETAQGQFLNFNKLLEINQGKIPFASASIG 215
Query: 257 KSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLKFLPREVQQSGST- 315
KSFRNEISPRSGLLRVREFLMAEIEHFVDP +KSH +F ++ + ++ L R +Q+SG
Sbjct: 216 KSFRNEISPRSGLLRVREFLMAEIEHFVDPLNKSHAKFNEVLNEEIPLLSRRLQESGEVQ 275
Query: 316 VPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHMANEMAHYAADCW 375
+P++ T+GEAV + +V+NETLGYF+AR++QFL+ IG++ ++ RFRQH+ NEMAHYA DCW
Sbjct: 276 LPVKMTIGEAVNSGMVENETLGYFMARVHQFLLNIGINKDKFRFRQHLKNEMAHYATDCW 335
Query: 376 DAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVTKWEATLVKKLFG 435
D E+ TSYGWIECVGCADR+A+DLTVHS KT L V++ L+TP E T+W + KK FG
Sbjct: 336 DGEILTSYGWIECVGCADRAAFDLTVHSKKTGRSLTVKQKLDTPKERTEWVVEVNKKFFG 395
Query: 436 PKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGDVEVDDKMVSIEKVTN 495
KF++ A +E+ L FSQ+EL +L+K+G+ T +V G V++D +V+I+ T
Sbjct: 396 SKFKQKAKLIESVLSKFSQDELIRRHEELEKNGEFTCQVNGQ--IVKLDSSLVTIKMKTT 453
Query: 496 TEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFPPLVAPTKXXXXXXXX 555
+HIRE++PNVIEPSFG+GRIIY IF+H F R + +R SFP +AP K
Sbjct: 454 LQHIREYIPNVIEPSFGLGRIIYCIFDHCFQVRVDSESRGFFSFPLQIAPIKVFVTTISN 513
Query: 556 XXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGVTIDFDSVTDGSIT 615
I ++SQ LRK +I FK+D+S SIGK+YARNDELGTPFG+TIDF+++ D ++T
Sbjct: 514 NDGFPAILKRISQALRKREIYFKIDDSNTSIGKKYARNDELGTPFGITIDFETIKDQTVT 573
Query: 616 LRERDSTKQVRGSVADVIKAIREITY--QGVSWEEGTKDLAP 655
LRER+S +QVRG++ DVI I ++ + W++ T L+P
Sbjct: 574 LRERNSMRQVRGTITDVISTIDKMLHNPDESDWDKSTFGLSP 615
>7294319 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 765
Score = 570 bits (1468), Expect = e-162
Identities = 303/662 (45%), Positives = 407/662 (60%), Gaps = 38/662 (5%)
Query: 4 EEVQQAKKAVEFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRK 63
+E+ V F R +E +LKRRFFY +F +YGG++G YD+GP GC+ ++NI+ +WR+
Sbjct: 140 KELALTPSVVSFDRAKMEDLLKRRFFYDQSFAIYGGITGQYDFGPMGCALKSNILALWRQ 199
Query: 64 HFVLEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLK 123
+F LEE MLEVDC++LTP VLK SGHV++F+D M KD KTGE FR DHL+++ LE +L
Sbjct: 200 YFALEEQMLEVDCSILTPEPVLKASGHVERFADLMVKDVKTGECFRLDHLIKQALE-KLS 258
Query: 124 GDKEARGLATDXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAEL 183
K+A A+ E E I+ K+DG + EL
Sbjct: 259 KAKDAT--------------------------------PALQAECEDIIIKLDGLNKQEL 286
Query: 184 GELMVKYDIGNPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXX 243
++ KY+I +P++G+ L P FNLMF T IGP+G KG+LRPETAQG
Sbjct: 287 AGVLAKYNIKSPLTGNDLTEPIEFNLMFATQIGPTGLVKGFLRPETAQGIFVNFKRLLEF 346
Query: 244 XXGKTPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLK 303
GK PFA A IG SFRNEISPRSGL+RVREF MAEIEHF DP K H +F +IK KL
Sbjct: 347 NQGKLPFAVAQIGNSFRNEISPRSGLIRVREFTMAEIEHFCDPVLKDHPKFGNIKSEKLT 406
Query: 304 FLPREVQQSGSTVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHM 363
Q G + + +GEAVA+KLV NETLGY++ARI QFL+ IG+ PE LRFRQHM
Sbjct: 407 LYSACNQMDGKSAA-QVQIGEAVASKLVANETLGYYMARIQQFLLAIGIKPECLRFRQHM 465
Query: 364 ANEMAHYAADCWDAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVT 423
+NEMAHYA DCWDAE+ TSYGW+ECVGCADRSAYDL H+ T +LV + L P V
Sbjct: 466 SNEMAHYACDCWDAEILTSYGWVECVGCADRSAYDLGQHTAATGVRLVAEKRLPAPKTVE 525
Query: 424 KWEATLVKKLFGPKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITL-KVEGMEGDVE 482
E K+ G F+K+A + L S EE+ QL DG+ L +G D+
Sbjct: 526 VSEIVPNKQALGKTFKKEAKNITDALAKLSLEEITKVEEQLAGDGQYKLTTADGQSHDLG 585
Query: 483 VDDKMVSIEKVTNTEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFPPL 542
D +S++ T T H+ EF+P+V+EPSFGIGRI+YS+ EHSF R D R + PPL
Sbjct: 586 KD--TISVKHSTKTVHVEEFIPSVVEPSFGIGRIMYSLLEHSFQCRDGDEQRCYFTLPPL 643
Query: 543 VAPTKXXXXXXXXXXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGV 602
VAP K + T ++S L K ++ KVD+S SIG+RYAR DE+ P+G+
Sbjct: 644 VAPIKCSILPLSNNTDFQPYTQKLSSALTKAELSHKVDDSSGSIGRRYARTDEIAIPYGI 703
Query: 603 TIDFDSVTD-GSITLRERDSTKQVRGSVADVIKAIREITYQGVSWEEGTKDLAPFNSQAE 661
T+DFD++ + ++TLR+R++ KQVR + +V+ +++++ +WE T+ F Q
Sbjct: 704 TVDFDTLKEPHTVTLRDRNTMKQVRVGLEEVVGVVKDLSTARTTWESVTEQYPLFEQQEA 763
Query: 662 SE 663
S+
Sbjct: 764 SK 765
>CE29472 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 742
Score = 563 bits (1451), Expect = e-160
Identities = 294/658 (44%), Positives = 401/658 (60%), Gaps = 38/658 (5%)
Query: 5 EVQQAKKAVEFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRKH 64
E+ A K F R LE +LKRRFFY +F +YGGV+GLYD+GP GCS +AN++ WRKH
Sbjct: 119 EIALAPKEASFDRLKLEDLLKRRFFYDQSFAIYGGVTGLYDFGPMGCSLKANMLQEWRKH 178
Query: 65 FVLEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLKG 124
F+LEE MLEVDCT LTP VLK SGHVD+F+DWM KD K GE FRADHL++ +E +L
Sbjct: 179 FILEEGMLEVDCTSLTPEPVLKASGHVDRFADWMVKDMKNGECFRADHLIKNSIE-KLLN 237
Query: 125 DKEARGLATDXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAELG 184
DK+ AV Q+ + +LA+++G+ ++
Sbjct: 238 DKKTSA--------------------------------AVKQDGQDVLARLEGFDNKDMH 265
Query: 185 ELMVKYDIGNPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXXX 244
E++ +++ +P++G+ L P AFNLMF T IGP+G +K +LRPETAQG
Sbjct: 266 EVITRFNFKSPITGNDLTEPIAFNLMFPTQIGPTGDFKAFLRPETAQGIFVNFKRLLEFN 325
Query: 245 XGKTPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLKF 304
GK PFA+A IG FRNEISPR GL+RVREF M EIEHFVDP DKS +F + D KL
Sbjct: 326 QGKLPFAAAQIGLGFRNEISPRQGLIRVREFTMCEIEHFVDPEDKSLAKFAKVADQKLVL 385
Query: 305 LPREVQQSGSTVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHMA 364
Q G+ E +GEAVA K V NETLGY++AR +QFL+K+G+D RLRFRQH++
Sbjct: 386 FSACNQLDGAPAQ-EVAIGEAVAKKTVANETLGYYMARCHQFLMKVGIDGRRLRFRQHLS 444
Query: 365 NEMAHYAADCWDAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVTK 424
NEMAHYA DCWDAE+ TSYGWIECVG ADR+ YDL H T KLV + L P++V
Sbjct: 445 NEMAHYAQDCWDAEILTSYGWIECVGNADRACYDLQQHYKATNVKLVAEKKLPEPVDVNF 504
Query: 425 WEATLVKKLFGPKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGDVEVD 484
EA L G F+KDA K++ L + E++ + +L L V+G + +
Sbjct: 505 VEAQANMALLGKSFKKDAKKIQTSLQQLTSEQVSALEEELLAKKLYNLSVDGQ--NYALT 562
Query: 485 DKMVSIEKVTNTEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFPPLVA 544
+ ++I+K T H++E P+VIEPS+GIGRI+Y++ EHSF R D R L+F PLVA
Sbjct: 563 PEHLNIKKYTKKIHVQEITPSVIEPSYGIGRIMYALLEHSFRQREGDEQRTFLAFKPLVA 622
Query: 545 PTKXXXXXXXXXXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGVTI 604
P K L + V + L + ++ +KVD+S +IG+RYAR DE+G PFG+T+
Sbjct: 623 PIKCSVLPISANDTLIPVMDAVKEELSRFEMSYKVDDSSGTIGRRYARTDEIGIPFGITV 682
Query: 605 DFDSV--TDGSITLRERDSTKQVRGSVADVIKAIREITYQGVSWEEGTKDLAPFNSQA 660
DFDS+ T ++T+R ++ Q+R V+++ + I ++ W + F + A
Sbjct: 683 DFDSLKTTPFTVTIRHAETMSQIRLEVSELGRLISDLVAGRQQWSDAQAKYPKFEASA 740
>Hs6996010 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 685
Score = 563 bits (1450), Expect = e-160
Identities = 290/634 (45%), Positives = 392/634 (61%), Gaps = 38/634 (5%)
Query: 17 RESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRKHFVLEEDMLEVDC 76
R +E LKRRFFY AF +YGGVSGLYD+GP GC+ + NI+ WR+HF+ EE +LE+DC
Sbjct: 67 RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC 126
Query: 77 TMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLKGDKEARGLATDXX 136
TMLTP VLKTSGHVDKF+D+M KD K GE FRADHL++ L+ +L DK+
Sbjct: 127 TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQ-KLMSDKKC-------- 177
Query: 137 XXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAELGELMVKYDIGNPV 196
E E +LA++D Y EL +L V Y++ +P+
Sbjct: 178 ------------------------SVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPI 213
Query: 197 SGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXXXXGKTPFASASIG 256
+G+ L PP +FNLMF+T IGP G GYLRPETAQG GK PFA+A IG
Sbjct: 214 TGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIG 273
Query: 257 KSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLKFLPREVQQSGSTV 316
SFRNEISPRSGL+RVREF MAEIEHFVDP++K H +FQ++ D+ L + Q SG +
Sbjct: 274 NSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSA 333
Query: 317 PLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHMANEMAHYAADCWD 376
+ +G+AV +++N LGYFI RIY +L K+G+ P++LRFRQHM NEMAHYA DCWD
Sbjct: 334 -RKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWD 392
Query: 377 AELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVTKWEATLVKKLFGP 436
AE +TSYGWIE VGCADRS YDL+ H+ TK LV + L+ P V + K G
Sbjct: 393 AESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKTVNVVQFEPSKGAIGK 452
Query: 437 KFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGDVEVDDKMVSIEKVTNT 496
++KDA V L + + L + G+ T++ EG + D M+++++ T
Sbjct: 453 AYKKDAKLVMEYLAICDECYITEMEMLLNEKGEFTIETEGKTFQLTKD--MINVKRFQKT 510
Query: 497 EHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFPPLVAPTKXXXXXXXXX 556
++ E VPNVIEPSFG+GRI+Y++FEH+F R D R SFP +VAP K
Sbjct: 511 LYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQN 570
Query: 557 XELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGVTIDFDSV--TDGSI 614
E ++S+ L + + KVD+S SIG+RYAR DE+G FGVTIDFD+V T +
Sbjct: 571 QEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTA 630
Query: 615 TLRERDSTKQVRGSVADVIKAIREITYQGVSWEE 648
TLR+RDS +Q+R ++++ ++++ ++W +
Sbjct: 631 TLRDRDSMRQIRAEISELPSIVQDLANGNITWAD 664
>At1g29880 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 690
Score = 555 bits (1431), Expect = e-158
Identities = 295/653 (45%), Positives = 396/653 (60%), Gaps = 40/653 (6%)
Query: 14 EFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRKHFVLEEDMLE 73
E R+++ + L+RR FY P+F++Y GV+GL+DYGPPGC+ ++N++ WR+HF+LEE+MLE
Sbjct: 75 EAFRKAVVNTLERRLFYIPSFKIYSGVAGLFDYGPPGCAIKSNVLSFWRQHFILEENMLE 134
Query: 74 VDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLKGDKEARGLAT 133
VDC +TP VLK SGHVDKF+D M KD KTG +RADHL+++ +L+ D
Sbjct: 135 VDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLEKD-------- 186
Query: 134 DXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAELGELMVKYDIG 193
+ E + +LA ++ +S +LG + +Y I
Sbjct: 187 ------------------------LTISAEKAAELKDVLAVMEDFSPEQLGAKIREYGIT 222
Query: 194 NPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXXXXGKTPFASA 253
P + + L P FNLMF+T+IGPSG GY+RPETAQG K PFA+A
Sbjct: 223 APDTKNPLSDPYPFNLMFQTSIGPSGLIPGYMRPETAQGIFVNFKDLYYYNGKKLPFAAA 282
Query: 254 SIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLKFLPREVQQSG 313
IG++FRNEISPR GLLRVREF +AEIEHFVDP +KSH +F D+ ++ PRE Q SG
Sbjct: 283 QIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPENKSHPKFSDVAKLEFLMFPREEQMSG 342
Query: 314 STVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHMANEMAHYAAD 373
+ + +GEAVA V+NETLGYFI R+Y FL ++G+D ERLRFRQH+ANEMAHYAAD
Sbjct: 343 QSAK-KLCLGEAVAKGTVNNETLGYFIGRVYLFLTRLGIDKERLRFRQHLANEMAHYAAD 401
Query: 374 CWDAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVTKWEATLVKKL 433
CWDAE+++SYGWIECVG ADRSAYDL HS+K+ LV E P EV K T VKK
Sbjct: 402 CWDAEIESSYGWIECVGIADRSAYDLRAHSDKSGTPLVAEEKFAEPKEVEKLVITPVKKE 461
Query: 434 FGPKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGDVEVDDKMVSIEKV 493
G F+ + V L A ++EE A L+ G++ V ++ V + MVSI K
Sbjct: 462 LGLAFKGNQKNVVESLEAMNEEEAMEMKATLESKGEVEFYVCTLKKSVNIKKNMVSISKE 521
Query: 494 TNTEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPE---DTARAVLSFPPLVAPTKXXX 550
EH R F P+VIEPSFGIGRIIY ++EH F +RP D + FPPLVAP K
Sbjct: 522 KKKEHQRVFTPSVIEPSFGIGRIIYCLYEHCFSTRPSKAGDEQLNLFRFPPLVAPIKCTV 581
Query: 551 XXXXXXXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGVTIDFDSVT 610
+ ++ +S+ L I K+D +G SIGKRYAR DELG PF +T+D +
Sbjct: 582 FPLVQNQQFEEVAKVISKELASVGISHKIDITGTSIGKRYARTDELGVPFAITVD----S 637
Query: 611 DGSITLRERDSTKQVRGSVADVIKAIREITYQGVSWEEGTKDLAPFNSQAESE 663
D S+T+RERDS QVR ++ + + ++ ++W++ +S A E
Sbjct: 638 DTSVTIRERDSKDQVRVTLKEAASVVSSVSEGKMTWQDVWATFPHHSSAAADE 690
>ECU10g1790 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 579
Score = 450 bits (1158), Expect = e-126
Identities = 254/618 (41%), Positives = 353/618 (57%), Gaps = 61/618 (9%)
Query: 14 EFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVWRKHFVLEEDMLE 73
+F ++ +E +LK+RFF + +YGGVSGLYD GPPG S + NI+ +WRKHFVLEEDMLE
Sbjct: 3 KFDQQQIEQILKKRFFITQSAYIYGGVSGLYDLGPPGLSIKTNILSLWRKHFVLEEDMLE 62
Query: 74 VDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEARLKGDKEARGLAT 133
++ T + P++VLK SGHVDKF D + D +G+ FRADHLV + LE
Sbjct: 63 IETTTMLPHDVLKASGHVDKFCDILVFDEVSGDCFRADHLVGDALEKM------------ 110
Query: 134 DXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGAELGELMVKYDIG 193
+ +E + L K+D S E+ E++ KY+I
Sbjct: 111 -----------------------------SPTEEISKELQKVDCMSCQEIDEIISKYNIR 141
Query: 194 NPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXXXXXXGKTPFASA 253
+ + G+KL + FNLMF T IG G +LRPETAQGQ K PFASA
Sbjct: 142 STL-GNKLSKSQQFNLMFGTQIGYKGGQTMFLRPETAQGQFLNFKKLCEYNNDKLPFASA 200
Query: 254 SIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIKLKFLPREVQQSG 313
SIGK++RNEISPRSGLLRVREF AEIEHFV ++K H +F ++ IKLK + + +
Sbjct: 201 SIGKAYRNEISPRSGLLRVREFDQAEIEHFVLTDEKDHPKFSTVQGIKLKLMHHDASE-- 258
Query: 314 STVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFRQHMANEMAHYAAD 373
E T+ EA+ +V NET+GY+I R FLI++G+D E LRFRQH +EMAHYA
Sbjct: 259 -----EITLKEAIERGIVCNETMGYYIGRTALFLIELGIDRELLRFRQHKKDEMAHYAKG 313
Query: 374 CWDAELQTSYGWIECVGCADRSAYDLTVHSNKTKEKLVVREALETPIEVTKWEATLVKKL 433
CWDAE+ TSYGWIECVG ADR+ YDL+ H + +K L + L P E+ +W L KK
Sbjct: 314 CWDAEIYTSYGWIECVGIADRACYDLSCHEDGSKVDLRCKRRLAEPKEIEEWVLKLDKKE 373
Query: 434 FGPKFRKDAPKVEARLLAFSQEELESYSAQLKKDGKITLKVEGMEGDVEVDDKMVSIE-- 491
+G K R + + SQ+ +E +++ V+ D+ ++IE
Sbjct: 374 WGAKLRDRFSVLMETVNGLSQKYIEK--------NVVSIGENRNRLSVKFDEYTINIECS 425
Query: 492 KVTNTEHIREFVPNVIEPSFGIGRIIYSIFEHSFWSRPEDTARAVLSFPPLVAPTKXXXX 551
+V + +P+VIEPSFGIGRI+Y++ EHSF+ R + +R V F P +AP +
Sbjct: 426 RVKKKVFVENVIPDVIEPSFGIGRILYALIEHSFYLR--EDSRPVFRFKPAIAPVQCAIG 483
Query: 552 XXXXXXELSKITAQVSQILRKEQIPFKVDESGVSIGKRYARNDELGTPFGVTIDFDSVTD 611
E ++ + + L + V+E SIG++Y+ DELG PF +T D D + D
Sbjct: 484 YLIHFDEFNEHILNIKRFLTDNGLVVHVNERSCSIGRKYSSCDELGIPFFITFDPDFLKD 543
Query: 612 GSITLRERDSTKQVRGSV 629
+T+RERDS +Q+R V
Sbjct: 544 RMVTIRERDSMQQIRVDV 561
>At1g29870 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 492
Score = 351 bits (901), Expect = 2e-96
Identities = 203/473 (42%), Positives = 251/473 (52%), Gaps = 62/473 (13%)
Query: 2 SVEEVQQAKKAVEFSRESLESVLKRRFFYAPAFELYGGVSGLYDYGPPGCSFQANIVDVW 61
S E +K E RE++ L R F +F++Y GV+GLYD+GP G + + NI+ +W
Sbjct: 46 SKPEKSAVEKDREDFREAVVKTLDRLLFVHKSFDIYHGVAGLYDFGPHGRTVELNILSLW 105
Query: 62 RKHFVLEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWMCKDPKTGEIFRADHLVEEVLEAR 121
RK FV EEDM+EV CT LTP V SGHV KF+D M KD G RADHLV+ E R
Sbjct: 106 RKCFVDEEDMMEVACTALTPEAVFNASGHVKKFTDLMVKDEVDGAFHRADHLVKSYCENR 165
Query: 122 LKGDKEARGLATDXXXXXXXXXXXXXXXXXXXXXXXXXLDDAVVQEYEQILAKIDGYSGA 181
K + A E ++++A ++ S
Sbjct: 166 KKDPTISAENAA---------------------------------ELDKVIAHVEDLSAE 192
Query: 182 ELGELMVKYDIGNPVSGDKLEPPRAFNLMFETAIGPSGQYKGYLRPETAQGQXXXXXXXX 241
ELG + PPR FNLMF+T+ G SG GYLRPETAQG
Sbjct: 193 ELGGVWNHCSTAPVTKNPLSHPPRPFNLMFQTSFGASGSLIGYLRPETAQGSFCNFKDYY 252
Query: 242 XXXXGKTPFASASIGKSFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDIK 301
K PFA A +G+ FRNEISPR GLLR REF +AEIEHFV P KSH +F D+ ++
Sbjct: 253 NLNGRKLPFAVAQVGRVFRNEISPRQGLLRTREFTLAEIEHFVHPEHKSHSKFSDVAKLE 312
Query: 302 LKFLPREVQQSGSTVPLEKTVGEAVA-----------------TKL------------VD 332
L PRE Q+ +GEAVA KL V+
Sbjct: 313 LLMFPREEQEKPGQFAKRLCLGEAVAKVSVFVIIFAYLLFDKKKKLILISTTENVLGHVN 372
Query: 333 NETLGYFIARIYQFLIKIGVDPERLRFRQHMANEMAHYAADCWDAELQTSYGWIECVGCA 392
+ETLG+FI R+Y FLI++G+D ERLRFR H+ANEMAHYA DCWDAE++ SYGWIECVG A
Sbjct: 373 SETLGFFIGRVYLFLIRLGIDKERLRFRHHLANEMAHYATDCWDAEIECSYGWIECVGIA 432
Query: 393 DRSAYDLTVHSNKTKEKLVVREALETPIEVTKWEATLVKKLFGPKFRKDAPKV 445
DRS YDL HS K+ LV +E L PIEV K T K GP F+ + V
Sbjct: 433 DRSDYDLRAHSEKSGHALVAQEKLAEPIEVEKLAITPEMKELGPAFKGNQKNV 485
>At3g44740 [J] KOG2298 Glycyl-tRNA synthetase and related class II tRNA
synthetase
Length = 276
Score = 186 bits (472), Expect = 1e-46
Identities = 93/163 (57%), Positives = 117/163 (71%), Gaps = 7/163 (4%)
Query: 247 KTPFASASIGK------SFRNEISPRSGLLRVREFLMAEIEHFVDPNDKSHKRFQDIKDI 300
K PFA+A IG+ ++ +IS R GLLRV EF +AEIEHFVDP +KSH +F D+ +
Sbjct: 86 KFPFAAAQIGQPLEMSDAYYLQISHRQGLLRVCEFTLAEIEHFVDPGNKSHPKFSDVANF 145
Query: 301 KLKFLPREVQQSGSTVPLEKTVGEAVATKLVDNETLGYFIARIYQFLIKIGVDPERLRFR 360
+ PRE Q SG + + +GE VA V+ ET+GYFIAR+Y FL+++G D E+LRFR
Sbjct: 146 EFLMFPREEQMSGQSAK-KLCLGEVVAKGTVNKETVGYFIARVYLFLVRLGTDKEQLRFR 204
Query: 361 QHMANEMAHYAADCWDAELQTSYGWIECVGCADRSAYDLTVHS 403
QH ANEMA YAADC DAE ++SYGWIECVG ADRSA+DL HS
Sbjct: 205 QHFANEMARYAADCLDAEFESSYGWIECVGIADRSAFDLRAHS 247
Score = 67.0 bits (162), Expect = 9e-11
Identities = 28/54 (51%), Positives = 40/54 (73%)
Query: 45 DYGPPGCSFQANIVDVWRKHFVLEEDMLEVDCTMLTPYEVLKTSGHVDKFSDWM 98
DY C+ ++N++ WR+HF+L+E+M EVDC +TP VLK SGHVD+F+D M
Sbjct: 24 DYLIKDCAVKSNVLSFWRQHFILKENMYEVDCPCVTPEVVLKASGHVDQFTDLM 77
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,495,571
Number of Sequences: 60738
Number of extensions: 1495856
Number of successful extensions: 3702
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3660
Number of HSP's gapped (non-prelim): 19
length of query: 663
length of database: 30,389,216
effective HSP length: 113
effective length of query: 550
effective length of database: 23,525,822
effective search space: 12939202100
effective search space used: 12939202100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)