ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2336 good L KOG3041 Replication, recombination and repair Nucleoside diphosphate-sugar hydrolase of the MutT (NUDIX) family
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2336 818061 818729 223
(223 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR111c [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of th... 315 2e-86
SPBP35G2.12 [L] KOG3041 Nucleoside diphosphate-sugar hydrolase o... 192 2e-49
Hs7657403 [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of ... 149 3e-36
CE18314 [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of th... 125 6e-29
>YBR111c [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of the MutT
(NUDIX) family
Length = 231
Score = 315 bits (808), Expect = 2e-86
Identities = 154/213 (72%), Positives = 178/213 (83%), Gaps = 1/213 (0%)
Query: 8 RAIIRSIHMSKNKPELAKLLSSKPVSDTSDCKWIGLRKLTYQDPNGKVREWDSAVRLTRS 67
R + R++ K KPE AK++ ++ V +TSDCKWIGL+K+ Y+DPNGK REWDSAVR TRS
Sbjct: 14 RRLFRTMSTVKGKPEDAKIIEARHVKETSDCKWIGLQKIIYKDPNGKEREWDSAVRTTRS 73
Query: 68 EGGVDGVGILAILRYSD-KPDEILLQKQFRPPVEGVCIEMPAGLIDGGESIETAALRELK 126
GGVDG+GIL IL+Y D KPDEILLQKQFRPPVEGVCIEMPAGLID GE I+TAALRELK
Sbjct: 74 SGGVDGIGILTILKYKDGKPDEILLQKQFRPPVEGVCIEMPAGLIDAGEDIDTAALRELK 133
Query: 127 EETGYVGKILHATPIIFNDPGFTNTNLSLVTAIVDMSLPENQNPVSELEENEFIECFTVP 186
EETGY GKI+ +P +FNDPGFTNTNL LVT VDMSLPENQ PV++LE+NEFIECF+V
Sbjct: 134 EETGYSGKIISKSPTVFNDPGFTNTNLCLVTVEVDMSLPENQKPVTQLEDNEFIECFSVE 193
Query: 187 LASMADEMAKLAEQGYKLDARVQNVAQGIKLAQ 219
L DEM KL +QGYKLDARVQNVAQGI +A+
Sbjct: 194 LHKFPDEMVKLDQQGYKLDARVQNVAQGILMAK 226
>SPBP35G2.12 [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of the MutT
(NUDIX) family
Length = 205
Score = 192 bits (489), Expect = 2e-49
Identities = 89/182 (48%), Positives = 126/182 (68%), Gaps = 1/182 (0%)
Query: 34 DTSDCKWIGLRKLTYQDPNGKVREWDSAVRLTRSEGGVDGVGILAILRYSDKPDEILLQK 93
+ D KW L+K+ +QD GK+R W+ A R TRSE VD V ILAI+ P +L QK
Sbjct: 16 ENQDAKWTSLKKIRWQDEKGKIRFWEMAERTTRSEANVDAVAILAIVPIDGSP-HVLCQK 74
Query: 94 QFRPPVEGVCIEMPAGLIDGGESIETAALRELKEETGYVGKILHATPIIFNDPGFTNTNL 153
QFRPP+ CIE+PAGL+D ES E AA+REL+EETGYVG ++ +T +++NDPG TN NL
Sbjct: 75 QFRPPIGKFCIEIPAGLVDSKESCEDAAIRELREETGYVGTVMDSTTVMYNDPGLTNANL 134
Query: 154 SLVTAIVDMSLPENQNPVSELEENEFIECFTVPLASMADEMAKLAEQGYKLDARVQNVAQ 213
++ A +DMS PENQNP +L++ E+IE F + L+S+ +E+ L ++G+ +D R+ A
Sbjct: 135 KIILADIDMSKPENQNPQQQLDDGEYIENFPIKLSSLQEELFSLEKKGFAIDVRLSTFAL 194
Query: 214 GI 215
G+
Sbjct: 195 GL 196
>Hs7657403 [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of the MutT
(NUDIX) family
Length = 219
Score = 149 bits (376), Expect = 3e-36
Identities = 79/184 (42%), Positives = 111/184 (59%), Gaps = 1/184 (0%)
Query: 36 SDCKWIGLRKLTYQDPNGKVREWDSAVRLTRSEGGVDGVGILAILRYSDKPDEILLQKQF 95
S+ KW+ L K TY DP GK R W+S TR E DGV ++ +L+ + + I+L KQF
Sbjct: 24 SEGKWVKLEKTTYMDPTGKTRTWESVNVPTRKEQTADGVAVIPVLQRTLHYECIVLVKQF 83
Query: 96 RPPVEGVCIEMPAGLIDGGESIETAALRELKEETGYVGKILHATPIIFNDPGFTNTNLSL 155
RPP+ G CIE PAGLID GE+ E AALREL+EETGY G I +P + DPG +N + +
Sbjct: 84 RPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHI 143
Query: 156 VTAIVDMSLPENQNPVSELEENEFIECFTVPLASMADEM-AKLAEQGYKLDARVQNVAQG 214
VT ++ EN P + + EF+E ++P + + A +AE+ +DARV + A
Sbjct: 144 VTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDALVAEEHLTVDARVYSYALA 203
Query: 215 IKLA 218
+K A
Sbjct: 204 LKHA 207
>CE18314 [L] KOG3041 Nucleoside diphosphate-sugar hydrolase of the MutT
(NUDIX) family
Length = 223
Score = 125 bits (313), Expect = 6e-29
Identities = 74/182 (40%), Positives = 106/182 (57%), Gaps = 3/182 (1%)
Query: 39 KWIGLRKLTYQDPNGKVREWDSAVRLTRS-EGGVDGVGILAILRYSDKPDEILLQKQFRP 97
KWI R++ ++ G+V W S R T+ E DGV I+A +R K I+L KQ+R
Sbjct: 41 KWIQTRQVGFKTHTGQVGVWQSVHRNTKPVEASADGVSIIARVRKQGKL-YIVLVKQYRI 99
Query: 98 PVEGVCIEMPAGLIDGGESIETAALRELKEETGYV-GKILHATPIIFNDPGFTNTNLSLV 156
P +C+E+PAGLID GE+ + AA+RELKEETGYV GK++ + + F DPG T+ + LV
Sbjct: 100 PCGKLCLELPAGLIDAGETAQQAAIRELKEETGYVSGKVVMESKLCFLDPGLTDDSQCLV 159
Query: 157 TAIVDMSLPENQNPVSELEENEFIECFTVPLASMADEMAKLAEQGYKLDARVQNVAQGIK 216
VD PENQNPV L+ E IE V +++ + L +++ + A GI+
Sbjct: 160 VVDVDGDAPENQNPVQVLDSTESIEVLLVEQSALMAYVTNLDSSSIVVESTLLAYAMGIQ 219
Query: 217 LA 218
A
Sbjct: 220 FA 221
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,549,334
Number of Sequences: 60738
Number of extensions: 588595
Number of successful extensions: 1415
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1407
Number of HSP's gapped (non-prelim): 4
length of query: 223
length of database: 30,389,216
effective HSP length: 102
effective length of query: 121
effective length of database: 24,193,940
effective search space: 2927466740
effective search space used: 2927466740
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)