ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2341 good E KOG1562 Amino acid transport and metabolism Spermidine synthase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2341 821388 822266 293
(293 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR069c [E] KOG1562 Spermidine synthase 509 e-144
SPBC12C2.07c [E] KOG1562 Spermidine synthase 409 e-114
Hs4507209 [E] KOG1562 Spermidine synthase 339 2e-93
CE21997 [E] KOG1562 Spermidine synthase 304 9e-83
YLR146c [E] KOG1562 Spermidine synthase 291 8e-79
At1g70310 [E] KOG1562 Spermidine synthase 290 2e-78
7299220 [E] KOG1562 Spermidine synthase 285 5e-77
At1g23820 [E] KOG1562 Spermidine synthase 283 2e-76
At5g53120 [E] KOG1562 Spermidine synthase 258 9e-69
At5g19530 [E] KOG1562 Spermidine synthase 123 3e-28
7299221 [E] KOG1562 Spermidine synthase 51 2e-06
HsM4759152 [E] KOG1562 Spermidine synthase 50 3e-06
Hs21264341 [E] KOG1562 Spermidine synthase 50 3e-06
>YPR069c [E] KOG1562 Spermidine synthase
Length = 293
Score = 509 bits (1310), Expect = e-144
Identities = 242/290 (83%), Positives = 262/290 (89%)
Query: 3 ELTHPTIVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNA 62
E+THPTIVDGWFREISDTMWPGQAMTL+VEK+LHHEKSKYQDVL+FKST YGNVLVLDN
Sbjct: 4 EITHPTIVDGWFREISDTMWPGQAMTLKVEKVLHHEKSKYQDVLIFKSTTYGNVLVLDNV 63
Query: 63 IQVTERDEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEA 122
IQ TERDEF+YQEMIAHLALNSHPNPKKVLVI VLRE+VKHDSV+EAWLCDIDEA
Sbjct: 64 IQATERDEFAYQEMIAHLALNSHPNPKKVLVIGGGDGGVLREVVKHDSVEEAWLCDIDEA 123
Query: 123 VIRVSKEYLPEMAKSYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAASLFQQS 182
VIR+SKEYLPEMA SYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPA +LFQ+
Sbjct: 124 VIRLSKEYLPEMAASYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAETLFQKE 183
Query: 183 YFELLNGALTEKGVISTQAESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTGQIGF 242
YF+LLN ALTEKGVI+TQAESMWIHLPIIK+LKKAC EVFP Y++ TIPTYPTG IGF
Sbjct: 184 YFQLLNSALTEKGVITTQAESMWIHLPIIKDLKKACSEVFPVAEYSFVTIPTYPTGTIGF 243
Query: 243 MVCSKDANVDVTKPLRSISEEEEEAKYRYYNKKVHEASFVLPTWVAKELD 292
MVCSKD +V KPLR IS+E+E YRYYNKK+HEASFVLPTW AKEL+
Sbjct: 244 MVCSKDKTCNVKKPLREISDEKEAELYRYYNKKIHEASFVLPTWAAKELN 293
>SPBC12C2.07c [E] KOG1562 Spermidine synthase
Length = 298
Score = 409 bits (1050), Expect = e-114
Identities = 200/292 (68%), Positives = 239/292 (81%), Gaps = 1/292 (0%)
Query: 1 MSELTHPTIVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLD 60
+ EL+HP I DGWFREI++ MWPGQAMTL+V+K+L+ KSKYQDVLVF+S YG+VLVLD
Sbjct: 3 VQELSHPLIKDGWFREINN-MWPGQAMTLKVKKVLYAGKSKYQDVLVFESETYGHVLVLD 61
Query: 61 NAIQVTERDEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDID 120
AIQ TERDEFSYQEMIAHLALNSHPNPKKVLVI VLRE+VKH+ V+EA LCDID
Sbjct: 62 GAIQATERDEFSYQEMIAHLALNSHPNPKKVLVIGGGDGGVLREVVKHECVEEAILCDID 121
Query: 121 EAVIRVSKEYLPEMAKSYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAASLFQ 180
E VI+VSK+YLPEM+ ++HPKVK HIGDGF+FL+DYQNTFDVIITDSSDP+GPA +LFQ
Sbjct: 122 EDVIKVSKQYLPEMSAGFNHPKVKVHIGDGFKFLQDYQNTFDVIITDSSDPDGPAEALFQ 181
Query: 181 QSYFELLNGALTEKGVISTQAESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTGQI 240
+ YF+LL+ AL GVI+TQAE MWIHL +I + A K VFP V YAYTTIPTYP+G I
Sbjct: 182 KPYFQLLSDALRGGGVITTQAECMWIHLGVISNVLTAVKTVFPNVRYAYTTIPTYPSGSI 241
Query: 241 GFMVCSKDANVDVTKPLRSISEEEEEAKYRYYNKKVHEASFVLPTWVAKELD 292
GF+V SKDA++D++KPLR S EEE +YYN ++H ASFVLPT+ +D
Sbjct: 242 GFVVASKDASIDLSKPLRKWSPEEENKLCKYYNSEIHAASFVLPTFARDVVD 293
>Hs4507209 [E] KOG1562 Spermidine synthase
Length = 302
Score = 339 bits (870), Expect = 2e-93
Identities = 160/285 (56%), Positives = 218/285 (76%), Gaps = 2/285 (0%)
Query: 9 IVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTER 68
I +GWFRE ++WPGQA++L+VE++LHH +S+YQD+LVF+S YGNVLVLD IQ TER
Sbjct: 16 IREGWFRETC-SLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTER 74
Query: 69 DEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVSK 128
DEFSYQEMIA+L L SHPNP+KVL+I VLRE+VKH SV+ C+IDE VI+VSK
Sbjct: 75 DEFSYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSK 134
Query: 129 EYLPEMAKSYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAASLFQQSYFELLN 188
++LP MA YS KV H+GDGF+F++ Q+ FDVIITDSSDP GPA SLF++SY++L+
Sbjct: 135 KFLPGMAIGYSSSKVTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMK 194
Query: 189 GALTEKGVISTQAESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTGQIGFMVCSKD 248
AL E GV+ Q E W+HL +IKE+++ C+ +FP V YAY TIPTYP+GQIGFM+CSK+
Sbjct: 195 TALKEDGVLCCQGECEWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKN 254
Query: 249 ANVDVTKPLRSISEEE-EEAKYRYYNKKVHEASFVLPTWVAKELD 292
+ + +P++ +++++ + + +YYN VH A+FVLP + K L+
Sbjct: 255 PSTNFQEPVQPLTQQQVAQMQLKYYNSDVHRAAFVLPEFARKALN 299
>CE21997 [E] KOG1562 Spermidine synthase
Length = 366
Score = 304 bits (779), Expect = 9e-83
Identities = 152/324 (46%), Positives = 213/324 (64%), Gaps = 53/324 (16%)
Query: 22 WPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTERDEFSYQEMIAHLA 81
WPGQA +L+V+K+L HEKSKYQDVLVF+ST YGNVLVLD +Q TERDEFSYQEM+AHL
Sbjct: 43 WPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLP 102
Query: 82 LNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVSKEYLPEMAKSYSHP 141
+ +HP+PK+VL+I +LRE++KH+SV++ +C+IDE VI V+K++LP M+ +SHP
Sbjct: 103 MFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162
Query: 142 KVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAASLFQQSYFELLNGALTEKGVISTQ- 200
K+ GDGF+FL++++N FDVIITDSSDP GPA SLF QSY+ELL AL E G++S+Q
Sbjct: 163 KLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222
Query: 201 ---------------------------------------------------AESMWIHLP 209
ES+W+HLP
Sbjct: 223 ECPWLDMKLISTVIHSARDLFPVAKYAVGSVPTYTSGLMGYILCAKDKVNTGESVWLHLP 282
Query: 210 IIKELKKACKEVFPTVGYAYTTIPTYPTGQIGFMVCSKDANVDVTKPLRSISEEEEEA-K 268
+I L +++FP V YA + + TYP+G +G+++C+K+AN DVT P R+++ E+ +A
Sbjct: 283 LIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKNANRDVTTPARTLTAEQIKALN 342
Query: 269 YRYYNKKVHEASFVLPTWVAKELD 292
R+YN +VH+A+FVLP +V L+
Sbjct: 343 LRFYNSEVHKAAFVLPQFVKNALE 366
>YLR146c [E] KOG1562 Spermidine synthase
Length = 300
Score = 291 bits (745), Expect = 8e-79
Identities = 139/294 (47%), Positives = 203/294 (68%), Gaps = 8/294 (2%)
Query: 6 HPTIVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQV 65
HP I DGWFREI+D +PGQA T+ V+ IL+ +S++QD+L+F++ YG VLVLD +Q
Sbjct: 7 HPYIKDGWFREINDKSFPGQAFTMTVDSILYEARSEFQDILIFRNKVYGTVLVLDGIVQC 66
Query: 66 TERDEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIR 125
TE DEF+YQEMI H+A+ +H NPK+VL+I VLRE+ KH V++ + +ID +VI
Sbjct: 67 TEFDEFAYQEMITHIAMFAHSNPKRVLIIGGGDGGVLREVAKHSCVEDITMVEIDSSVIE 126
Query: 126 VSKEYLPEMAK-SYSHPKVKTHIGDGFQFLR-----DYQNTFDVIITDSSDPEGPAASLF 179
+S+++LP ++ ++ ++ + DGF+FL+ D FDVIITDSSDPEGPA + F
Sbjct: 127 LSRKFLPTLSNGAFDDERLDLKLCDGFKFLQDIGASDVHKKFDVIITDSSDPEGPAEAFF 186
Query: 180 QQSYFELLNGALTEKGVISTQ-AESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTG 238
Q+ YFELL AL GV+ Q +E+ W++L + +LK K+VFP Y YT +PTY +G
Sbjct: 187 QERYFELLKDALNPNGVVIMQSSENFWLNLKYLHDLKNTAKKVFPNTEYCYTMVPTYTSG 246
Query: 239 QIGFMVCSKDANVDVTKPLRSISEEEEEAKYRYYNKKVHEASFVLPTWVAKELD 292
Q+G +VCS +AN+ + P R IS E+E+ K +YYN ++H ++FVLPTW K ++
Sbjct: 247 QLGLIVCSNNANIPLNIPQRKIS-EQEQGKLKYYNPQIHSSAFVLPTWADKVIN 299
>At1g70310 [E] KOG1562 Spermidine synthase
Length = 340
Score = 290 bits (742), Expect = 2e-78
Identities = 146/292 (50%), Positives = 202/292 (69%), Gaps = 8/292 (2%)
Query: 8 TIVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTE 67
+I+ GWF EIS MWPG+A +L+VEKIL KS YQDV+VF+S YG VLVLD IQ+TE
Sbjct: 46 SIIPGWFSEISP-MWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTE 104
Query: 68 RDEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVS 127
RDE +YQEMI HL L S NPKKVLVI VLRE+ +H SV++ +C+ID+ V+ V+
Sbjct: 105 RDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVA 164
Query: 128 KEYLPEMAKSYSHPKVKTHIGDGFQFLRD-YQNTFDVIITDSSDPEGPAASLFQQSYFEL 186
K+Y P +A Y P+V IGDG FL++ + T+D +I DSSDP GPA LF++ +FE
Sbjct: 165 KQYFPNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGPAKELFEKPFFES 224
Query: 187 LNGALTEKGVISTQAESMWIHLPIIKELKKACKEVFP-TVGYAYTTIPTYPTGQIGFMVC 245
+N AL GV+ TQAES+W+H+ II+++ C+++F +V YA+T++PTYP+G IGFM+C
Sbjct: 225 VNRALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLC 284
Query: 246 SKDA-NVDVTKPLRSISEEEEEAK----YRYYNKKVHEASFVLPTWVAKELD 292
S + VD KP+ I +E K +YYN ++H A+F LP++ K +D
Sbjct: 285 SSEGPQVDFKKPVSLIDTDESSIKSHCPLKYYNAEIHSAAFCLPSFAKKVID 336
>7299220 [E] KOG1562 Spermidine synthase
Length = 287
Score = 285 bits (729), Expect = 5e-77
Identities = 134/279 (48%), Positives = 190/279 (68%), Gaps = 1/279 (0%)
Query: 11 DGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTERDE 70
+GWF E+ +WPGQ+ +L+V++++H EKS++QD+ + ++ YG L+LD IQ T RDE
Sbjct: 6 NGWFSELQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETETYGRCLILDGIIQCTARDE 65
Query: 71 FSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVSKEY 130
FSYQEMI+ L L +HPNPKKVL++ V RE+VKH V+E +ID+ V+ +SK+Y
Sbjct: 66 FSYQEMISFLPLCAHPNPKKVLIVGGGDGGVAREVVKHPLVEEVHQVEIDDRVVELSKQY 125
Query: 131 LPEMAKSYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDPEGPAASLFQQSYFELLNGA 190
LP MA +++ K+K IGDGF +++ ++N FDVIITDSSDP GPA SLFQ+SY+EL+ A
Sbjct: 126 LPAMACGFANEKLKLTIGDGFDYMKKHKNEFDVIITDSSDPIGPAVSLFQESYYELMKHA 185
Query: 191 LTEKGVISTQAESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTGQIGFMVCSKDAN 250
L + G++ +Q S W+ L IK+ CKE F V YA T++P+YP G IGF++ S + N
Sbjct: 186 LKDDGIVCSQGGSFWLDLDYIKKTMSGCKEHFAKVAYAVTSVPSYPCGHIGFVMGSLNKN 245
Query: 251 VDVTKPLRSISEEEEEAKYRYYNKKVHEASFVLPTWVAK 289
D P S E + RYY+ +VH A+F LP WV K
Sbjct: 246 QDFATPKLGKS-EIDSIDLRYYSSEVHSAAFALPRWVQK 283
>At1g23820 [E] KOG1562 Spermidine synthase
Length = 334
Score = 283 bits (724), Expect = 2e-76
Identities = 139/290 (47%), Positives = 203/290 (69%), Gaps = 6/290 (2%)
Query: 8 TIVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTE 67
T++ GWF E+S MWPG+A +L+VEK+L KS YQDV+VF+S YG VLVLD IQ+TE
Sbjct: 42 TVIPGWFSEMSP-MWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTE 100
Query: 68 RDEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVS 127
RDE +YQEMI HL L S PNPKKVLVI VLRE+ +H S+++ +C+ID+ V+ VS
Sbjct: 101 RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVS 160
Query: 128 KEYLPEMAKSYSHPKVKTHIGDGFQFLRD-YQNTFDVIITDSSDPEGPAASLFQQSYFEL 186
K++ P++A Y P+V IGDG FL++ + ++D +I DSSDP GPA LF++ +F+
Sbjct: 161 KQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQS 220
Query: 187 LNGALTEKGVISTQAESMWIHLPIIKELKKACKEVFP-TVGYAYTTIPTYPTGQIGFMVC 245
+ AL GV+ TQAES+W+H+ II+++ C+E+F +V YA+T++PTYP+G IGFM+C
Sbjct: 221 VARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLC 280
Query: 246 SKDA-NVDVTKPLRSISEEEEEAK--YRYYNKKVHEASFVLPTWVAKELD 292
S + +VD PL I E ++ ++YN ++H A+F LP++ K ++
Sbjct: 281 STEGPDVDFKHPLNPIDESSSKSNGPLKFYNAEIHSAAFCLPSFAKKVIE 330
>At5g53120 [E] KOG1562 Spermidine synthase
Length = 343
Score = 258 bits (658), Expect = 9e-69
Identities = 131/292 (44%), Positives = 194/292 (65%), Gaps = 8/292 (2%)
Query: 6 HPTIVDGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQV 65
H T+V GWF E G+A +L+VEK+L +KS +Q+VLVF+S YG VLVLD +Q+
Sbjct: 48 HSTVVSGWFSEPHPRS--GEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQL 105
Query: 66 TERDEFSYQEMIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIR 125
TE+DE +YQEMIAHL L S +PK VLV+ VLREI +H SV+ +C+ID+ VI
Sbjct: 106 TEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVID 165
Query: 126 VSKEYLPEMAKSYSHPKVKTHIGDGFQFLR-DYQNTFDVIITDSSDPEGPAASLFQQSYF 184
VSK++ PE+A + P+V+ HIGD +FLR + +D II DSSDP GPA +L ++ +F
Sbjct: 166 VSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPFF 225
Query: 185 ELLNGALTEKGVISTQAESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTGQIGFMV 244
E L AL GV+ AESMW+H +I+++ C++ F +V YA++++PTYP+G IGF++
Sbjct: 226 ETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFKSVHYAWSSVPTYPSGVIGFVL 285
Query: 245 CSKDA-NVDVTKPLRSISEEE----EEAKYRYYNKKVHEASFVLPTWVAKEL 291
CS + VD P+ I + + + + ++YN +H A+F LPT++ +E+
Sbjct: 286 CSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREV 337
>At5g19530 [E] KOG1562 Spermidine synthase
Length = 340
Score = 123 bits (309), Expect = 3e-28
Identities = 83/289 (28%), Positives = 140/289 (47%), Gaps = 18/289 (6%)
Query: 13 WFREI--SDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTERDE 70
W+ E D W + + +LH S+YQD+ + + +G VLV+D +Q ERDE
Sbjct: 35 WYEETIDDDLKW-----SFALNSVLHQGTSEYQDIALLDTKRFGKVLVIDGKMQSAERDE 89
Query: 71 FSYQEMIAHLALNSHPN-PKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVSKE 129
F Y E + H AL HPN PK V ++ REI+KH ++++ +CDID+ V+ +
Sbjct: 90 FIYHECLIHPALLFHPNSPKTVFIMGGGEGSAAREILKHTTIEKVVMCDIDQEVVDFCRR 149
Query: 130 YLPEMAKSYSHPKVKTHIGDGFQFLRDYQNTFDVIITDSSDP--EGPAASLFQQSYFE-L 186
+L + ++ + K++ I D L + FD+I+ D +DP GP L+ +S+++ +
Sbjct: 150 FLTVNSDAFCNKKLELVIKDAKAELEKREEKFDIIVGDLADPVEGGPCYQLYTKSFYQNI 209
Query: 187 LNGALTEKGVISTQA--ESMWIHLPIIKELKKACKEVFPTVGYAYTTIPTYPTGQIGFMV 244
L L+ G+ TQA ++ H + + K+VF V +P++ M
Sbjct: 210 LKPKLSPNGIFVTQAGPAGIFTHKEVFTSIYNTMKQVFKYVKAYTAHVPSFADTWGWVMA 269
Query: 245 CSKDANVDVTKPLRSISEEEEEAKYRYYNKKVHEASFVLPTWVAKELDL 293
+ +V+V + R I EE + Y N SFV + K + L
Sbjct: 270 SDHEFDVEVDEMDRRI-EERVNGELMYLN----APSFVSAATLNKTISL 313
>7299221 [E] KOG1562 Spermidine synthase
Length = 51
Score = 50.8 bits (120), Expect = 2e-06
Identities = 16/41 (39%), Positives = 33/41 (80%)
Query: 11 DGWFREISDTMWPGQAMTLRVEKILHHEKSKYQDVLVFKST 51
+GWF E+ +WPGQ+ +L+V++++H EKS++QD+ + +++
Sbjct: 6 NGWFSELQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETS 46
>HsM4759152 [E] KOG1562 Spermidine synthase
Length = 368
Score = 50.4 bits (119), Expect = 3e-06
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 19 DTMWP---GQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTERDEFSYQE 75
D WP G+ + ++++++ E S YQ++ + S +GN+L+L + + E D +Y
Sbjct: 123 DRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTR 181
Query: 76 MIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVSKEYL---- 131
I + K VL++ +L EIVK + + +ID+ VI K+Y+
Sbjct: 182 AIMGSGKEDYTG-KDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTC 239
Query: 132 PEMAKSYSHPKVKTHIGDGFQFLRDYQ---NTFDVIITD------SSDPEGPAASLFQQS 182
++ + + I D L+ Y FD +I D S+ PE + F +
Sbjct: 240 GDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRL 299
Query: 183 YFELLNGALTEKGVISTQ 200
+L L + G TQ
Sbjct: 300 ILDLSMKVLKQDGKYFTQ 317
>Hs21264341 [E] KOG1562 Spermidine synthase
Length = 366
Score = 50.4 bits (119), Expect = 3e-06
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 19 DTMWP---GQAMTLRVEKILHHEKSKYQDVLVFKSTDYGNVLVLDNAIQVTERDEFSYQE 75
D WP G+ + ++++++ E S YQ++ + S +GN+L+L + + E D +Y
Sbjct: 121 DRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTR 179
Query: 76 MIAHLALNSHPNPKKVLVIXXXXXXVLREIVKHDSVQEAWLCDIDEAVIRVSKEYL---- 131
I + K VL++ +L EIVK + + +ID+ VI K+Y+
Sbjct: 180 AIMGSGKEDYTG-KDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTC 237
Query: 132 PEMAKSYSHPKVKTHIGDGFQFLRDYQ---NTFDVIITD------SSDPEGPAASLFQQS 182
++ + + I D L+ Y FD +I D S+ PE + F +
Sbjct: 238 GDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRL 297
Query: 183 YFELLNGALTEKGVISTQ 200
+L L + G TQ
Sbjct: 298 ILDLSMKVLKQDGKYFTQ 315
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,756,406
Number of Sequences: 60738
Number of extensions: 726799
Number of successful extensions: 1924
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1893
Number of HSP's gapped (non-prelim): 14
length of query: 293
length of database: 30,389,216
effective HSP length: 105
effective length of query: 188
effective length of database: 24,011,726
effective search space: 4514204488
effective search space used: 4514204488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)