ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2598 suspect: LH G KOG2161 Carbohydrate transport and metabolism Glucosidase I
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2598 896677 899913 1079
(1079 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR196w [G] KOG2161 Glucosidase I 1504 0.0
>YMR196w [G] KOG2161 Glucosidase I
Length = 1088
Score = 1504 bits (3893), Expect = 0.0
Identities = 709/1080 (65%), Positives = 866/1080 (79%), Gaps = 30/1080 (2%)
Query: 6 TTEERRLLQNKNKEKYWLKWGPYLSERSWATVKEDYSHDGDAWSFFPFEHANSRVFRWGE 65
T EE RL +N+N EKYW +WGPYLSERSWATV+EDYS +GDAWS FPFEHAN+RVFRWGE
Sbjct: 12 TVEEERLRENRNHEKYWYRWGPYLSERSWATVREDYSLNGDAWSNFPFEHANARVFRWGE 71
Query: 66 DGLFGVSDNRQLICCNVAVWNGKDSILKERMYGLTSHQGNHGEDGKELYYYVDNLPSHAY 125
DGLFGVSDN+QL+C NVA+WNGKD LKER++GLT QGNHGED KELY+Y+DN P+H+Y
Sbjct: 72 DGLFGVSDNKQLVCMNVALWNGKDERLKERLFGLTGPQGNHGEDVKELYFYLDNTPTHSY 131
Query: 126 MKAIYKYPFNKPYPYEELVARNSELGFEDQEFEIYEIDGLFKEKDTGDTPYFDIVYEMAK 185
MKA+YKYPF K +PY+ELV +N E G+ED+EFE+Y+IDGL+++ +TGD PYFD+ +EMAK
Sbjct: 132 MKALYKYPFKKAFPYKELVQKNGERGYEDKEFEVYDIDGLYRDSETGDNPYFDVFFEMAK 191
Query: 186 DDDNPNDLSFRITAYNRSTSKTGELYISPQVFFRNTWSWNET-DRVKPHLEKSGN--NFV 242
DD+NP++L+FR+T +NRS +GELYI+PQ+FFRNTW+++ T + KP LE+ N +
Sbjct: 192 DDENPSELNFRLTIHNRSKIDSGELYIAPQLFFRNTWAFDGTRTKDKPLLERDAEAANLI 251
Query: 243 TLSTEKYGTTYAIFAPSPGEFDDGEDDHPTTVATNGVDDDQGILDVEPELLFTENESNWK 302
++ +KYG +F PSPG F G TN ++D+ + D++P LLFT+NESN
Sbjct: 252 NMTHKKYGNCQMVFQPSPGGFSSG---------TNEEEEDKEVEDIDPLLLFTDNESNLV 302
Query: 303 KLFDSKENPTPYTKDAFNEYIVNKDTEAVNPKNEGTKACGVYHFPKVPPGEYVTVRYKLT 362
KLF+ ++NP+ YTKDAF EY+V T+AVNP+N+GTKAC VYHF +PPGEYVTVRYK T
Sbjct: 303 KLFNEEKNPSEYTKDAFEEYLVQGKTDAVNPENKGTKACAVYHFKNIPPGEYVTVRYKFT 362
Query: 363 -DTRLPMFEDE--MVIDEDDFDSLFDRREQEADNFYWRVTPAPIPESLRAVQRQAFAGLL 419
D + +F+ + V+DED+FD +FD RE+EADNFYWR+TP PI + LR +QRQAF+GLL
Sbjct: 363 NDPKNSIFKAQNLAVVDEDEFDLIFDNREEEADNFYWRITPLPISDELRNLQRQAFSGLL 422
Query: 420 WSKQFYHFVQDEWYCGDPLQKPPPPKNRANGRNKDWKHMYAEDILSLPDKWEYPFFASWD 479
W+KQFY+F D WY GD KP PP NRANGRNK+WKH+Y EDILS+PDKWEYPFFASWD
Sbjct: 423 WTKQFYNFTYDAWYNGDANVKPRPPPNRANGRNKNWKHLYIEDILSMPDKWEYPFFASWD 482
Query: 480 TAFHCIPLAMIDPEFAKKQLDIFTREWYMHPNGQIPAYEWNFSDVNPPVHAWAVYRVFKI 539
TAFHCIPLAMIDPEFAK+QLD+ TREWYMHPNGQIPAYEWNF+DVNPPVHAWAVYRVFKI
Sbjct: 483 TAFHCIPLAMIDPEFAKRQLDLLTREWYMHPNGQIPAYEWNFNDVNPPVHAWAVYRVFKI 542
Query: 540 ERNMYGREDRVFLERVFQKLLLNFTWWVNRKDHDGNNVFEGGFLGLDNIGIFNRSEPLPT 599
ERNMY REDR FLERVFQKLLLNFTWWVNRKD +G NVFEGGFLGLDNIG+FNRSEPLPT
Sbjct: 543 ERNMYNREDRTFLERVFQKLLLNFTWWVNRKDTEGKNVFEGGFLGLDNIGVFNRSEPLPT 602
Query: 600 GGTLEQADSTGWMAFFSLQMLNIALELAKENPVYEDIATKFFEHFLYISDSMSFKFEKN- 658
GGTLEQADSTGWMAFFSLQMLNIALELAKENPVYEDIA+KFFEHF+ ISDSMSF++ +
Sbjct: 603 GGTLEQADSTGWMAFFSLQMLNIALELAKENPVYEDIASKFFEHFILISDSMSFEYATDI 662
Query: 659 SADNFKEEVKESLWNEEDQFYYDAISWGEPFKQQLPIRSLVGLIPLYACMTLEPRILDKF 718
+ + KE +K++LWNE D+FYYDAISWG+ K QLPIRSLVGLIPLYA MTLEP I+ +F
Sbjct: 663 TGEKCKEVIKQNLWNEADKFYYDAISWGD-HKVQLPIRSLVGLIPLYASMTLEPSIIKQF 721
Query: 719 PGFKKRIDWFLSNRSAMFDRNIASMEKRGIGERLLLALVNEDRLKAILSRMLDETEFLSD 778
GFKKR+DWF++NR +FDRNIASM K+G+GERLLL+LV ++RL AILSR+LDETEFLS
Sbjct: 722 RGFKKRVDWFVNNRPEIFDRNIASMSKKGVGERLLLSLVTKERLTAILSRLLDETEFLSP 781
Query: 779 YGIRSLSKYHETHPFSMSVNGEQYEVKYLPGESNSGMFGGNSNWRGPVWFPTNFLLVESL 838
YGIRSLSKYHE HPF M+VNG +Y VKYLPGES+SGMFGGNSNWRGP+WFPT+FL++E+L
Sbjct: 782 YGIRSLSKYHEKHPFEMNVNGVEYMVKYLPGESDSGMFGGNSNWRGPIWFPTSFLIMEAL 841
Query: 839 QRFFLYYGPDFKVECPTGSGEFLNLAQVAEELQHRLIHLFIPDAEGQRAVYHGEYSEFLS 898
QRF+LYYG DFKVECP GSG++LNLA+VAEEL +R+IHLF+PD G+RA+++G++S+FLS
Sbjct: 842 QRFYLYYGSDFKVECPVGSGDYLNLAEVAEELGYRMIHLFVPDENGERAIHYGDHSKFLS 901
Query: 899 KDPNFEELIPFYEYFDGDTGRGLGASHQCGWTALVAKWIHDTGLSCVRLPRTPRSSVTLS 958
DP F + +PF+EYFDGDTGRGLGASHQCGWTALVAKWI D G+SCVRLPRTPRSSV
Sbjct: 902 SDPYFRDYVPFFEYFDGDTGRGLGASHQCGWTALVAKWISDVGISCVRLPRTPRSSVA-- 959
Query: 959 NLDKTQVDSLLNELKPNMPRKIARRKSSKSLINXXXXXXXXXXXXKYLHCIGSTRRESAK 1018
T + +E P M +++ARRKS+KSL+N K H IG T S
Sbjct: 960 ----TTASTESSEQGPKM-KRMARRKSAKSLVNYTATILDLTEEEKRHHRIGGT--HSGL 1012
Query: 1019 LAQRXXXXXXXXXXXXXXVTFEKLKQNQLAEE----ESRLVNELRRRLSHTTINSADEDE 1074
Q E + + + E+ E++L+ +L+ ++ + + +DE
Sbjct: 1013 TPQSSISSDKARHLMEEMNEEEGIHETVVPEDRHNFETKLIGKLKDKVKNMKVTDKAKDE 1072
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,986,515
Number of Sequences: 60738
Number of extensions: 3563572
Number of successful extensions: 7857
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7850
Number of HSP's gapped (non-prelim): 1
length of query: 1079
length of database: 30,389,216
effective HSP length: 117
effective length of query: 962
effective length of database: 23,282,870
effective search space: 22398120940
effective search space used: 22398120940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)