ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2599 good U KOG1666 Intracellular trafficking, secretion, and vesicular transport V-SNARE
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2599 900862 900200 -221
(221 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR197c [U] KOG1666 V-SNARE 224 6e-59
SPBC3B9.10 [U] KOG1666 V-SNARE 99 4e-21
CE28871 [U] KOG1666 V-SNARE 97 2e-20
At3g29100 [U] KOG1666 V-SNARE 86 4e-17
7291992 [U] KOG1666 V-SNARE 82 4e-16
Hs21624648 [U] KOG1666 V-SNARE 78 8e-15
At5g39510 [U] KOG1666 V-SNARE 76 3e-14
At5g39630 [U] KOG1666 V-SNARE 68 1e-11
Hs5454166 [U] KOG1666 V-SNARE 58 1e-08
Hs20475459 [U] KOG1666 V-SNARE 51 1e-06
>YMR197c [U] KOG1666 V-SNARE
Length = 217
Score = 224 bits (572), Expect = 6e-59
Identities = 121/223 (54%), Positives = 160/223 (71%), Gaps = 8/223 (3%)
Query: 1 MSSLLQNYESECQVAINQAKVLLANAKNDAGAVLKGGKSDILLQIQQYHDESLELVDQME 60
MSSLL +YES+ + + QAK LA A + ++ L ++Q DE +L+DQM+
Sbjct: 1 MSSLLISYESDFKTTLEQAKASLAEAPSQP----LSQRNTTLKHVEQQQDELFDLLDQMD 56
Query: 61 IELNNTGNSLDSKTRASYKAKIRDYKRQCQNEIKDPLKQLVQESDRNKLLEGRHFDN--D 118
+E+NN+ D+ RA+YKAK+R++K+ Q++IK PL+ LV DR++L + N D
Sbjct: 57 VEVNNSIG--DASERATYKAKLREWKKTIQSDIKRPLQSLVDSGDRDRLFGDLNASNIDD 114
Query: 119 EQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQTLFHADS 178
+QRQQLLSNHA+LQ+SGD+L+DA+R+A+ETE +G+QIMMDLRSQRETLENARQTLF ADS
Sbjct: 115 DQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQADS 174
Query: 179 YVDKSIRTLKTMTRRLIANKFISYXXXXXXXXXXXXXXFSKFK 221
YVDKSI+TLKTMTRRL+ANKFISY FSKFK
Sbjct: 175 YVDKSIKTLKTMTRRLVANKFISYAIIAVLILLILLVLFSKFK 217
>SPBC3B9.10 [U] KOG1666 V-SNARE
Length = 214
Score = 99.4 bits (246), Expect = 4e-21
Identities = 68/226 (30%), Positives = 113/226 (49%), Gaps = 21/226 (9%)
Query: 5 LQNYESECQVAINQAKVLLANAKNDAGAVLKGGKSDILLQIQQYHDESLELVDQMEIELN 64
++ YE E ++L A+ + + K G++ ++ Q+ +E E++ QMEIE+
Sbjct: 1 METYEQEY-------RLLRADIEEKLNDLSKSGENSVIQSCQRLLNEIDEVIGQMEIEIT 53
Query: 65 NTGNSLDSKTRASYKAKIRDYKRQCQNEIKDPLKQLVQESDRNKLLEGRH--------FD 116
+ + R +IR Y R E + LK+ + +SDR L R D
Sbjct: 54 G----IPTSERGLVNGRIRSY-RSTLEEWRRHLKEEIGKSDRKALFGNRDETSGDYIASD 108
Query: 117 ND-EQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQTLFH 175
D +QR +LL L++S +L ++ R+A+ETE +GA I+ DL QR LE++ + L
Sbjct: 109 QDYDQRTRLLQGTNRLEQSSQRLLESQRIANETEGIGASILRDLHGQRNQLEHSLEMLGD 168
Query: 176 ADSYVDKSIRTLKTMTRRLIANKFISYXXXXXXXXXXXXXXFSKFK 221
++D+S+RTLKTM RRL N+F + +SKF+
Sbjct: 169 TSGHLDRSLRTLKTMARRLAMNRFFTTAIIAILVILILLVLYSKFR 214
>CE28871 [U] KOG1666 V-SNARE
Length = 224
Score = 96.7 bits (239), Expect = 2e-20
Identities = 54/161 (33%), Positives = 101/161 (62%), Gaps = 6/161 (3%)
Query: 44 QIQQYHDESLELVDQMEIELNNTGNSLDSKTRASYKAKIRDY---KRQCQNEIKDPLKQL 100
+I++ +E +L+DQME+ + ++ +T+ Y+ ++R Y K+Q E++ +K++
Sbjct: 46 EIRKSLEEVNDLLDQMELVVRELESNTTERTK--YELRVRSYQSDKKQLDTELEKAIKRV 103
Query: 101 VQESDRNKLLE-GRHFDNDEQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDL 159
+E+DR++LL D Q QL++N L+RS K+QDA R+A ETE +GA+++ +L
Sbjct: 104 REEADRDELLAFDDQLDEHRQEDQLIANTQRLERSTRKVQDAHRIAVETEQIGAEMLSNL 163
Query: 160 RSQRETLENARQTLFHADSYVDKSIRTLKTMTRRLIANKFI 200
SQRET+ +R L +++ + ++ +TL +M RR I N+ +
Sbjct: 164 ASQRETIGRSRDRLRQSNADLGRANKTLSSMIRRAIQNRLL 204
>At3g29100 [U] KOG1666 V-SNARE
Length = 221
Score = 85.9 bits (211), Expect = 4e-17
Identities = 66/208 (31%), Positives = 107/208 (50%), Gaps = 19/208 (9%)
Query: 1 MSSLLQNYESE-CQVAINQAKVLLANAKNDAGAVLKGG-KSDILLQIQQYHDESLELVDQ 58
MS + YE + C+++ N +K K + L G K L +I+ +E+ LV +
Sbjct: 1 MSQGFERYERQYCEISANLSK------KCTSAIALDGEQKKQNLSEIKSGVEEAEALVKK 54
Query: 59 MEIELNNTGNSLDSKTRASYKAKIRDYKRQCQN---EIKDPLKQLVQESDRNKLLEGRHF 115
M++E N L ++S K+R+YK N E+K + + R++LLE
Sbjct: 55 MDLEARN----LPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMA 110
Query: 116 D----NDEQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQ 171
D + +QR +L+ + L R+ D+++D+ R ETE +G I+ DL QR++L A +
Sbjct: 111 DTLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHE 170
Query: 172 TLFHADSYVDKSIRTLKTMTRRLIANKF 199
TL D V KS + L TMTRR+ NK+
Sbjct: 171 TLHGVDDNVGKSKKILTTMTRRMNRNKW 198
>7291992 [U] KOG1666 V-SNARE
Length = 230
Score = 82.4 bits (202), Expect = 4e-16
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 7/204 (3%)
Query: 3 SLLQNYESECQVAINQAKVLLANAKNDAGAVLKGGKSDILLQIQQYHDESLELVDQMEIE 62
SLL+ YE + I + + + + D+ +I E+ EL++QM +E
Sbjct: 2 SLLEQYEQQYATLIAEITAHIGRLQQQNN---NSERHDLCSKIDSSLPEAQELLEQMGLE 58
Query: 63 LNNTGNSLDSKTRASYKAKIRDYKRQCQNEIKDPLKQLVQESDRNKLLEGRHFDN----D 118
+ L S + + KR KQ Q + L G +++
Sbjct: 59 VRELNPGLRSSFNGKLQVAQAELKRLQAEYRLTKDKQRSQANTFTTLDLGDSYEDVSIST 118
Query: 119 EQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQTLFHADS 178
+QRQ+LL N ++R+G++L + R+A ETE +GAQ++ DL QRETL+ AR L ++
Sbjct: 119 DQRQRLLDNSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARARLRETNA 178
Query: 179 YVDKSIRTLKTMTRRLIANKFISY 202
+ ++ RTL TM R + K + Y
Sbjct: 179 ELGRASRTLNTMMLRALREKVVLY 202
>Hs21624648 [U] KOG1666 V-SNARE
Length = 203
Score = 78.2 bits (191), Expect = 8e-15
Identities = 54/195 (27%), Positives = 98/195 (49%), Gaps = 10/195 (5%)
Query: 1 MSSLLQNYESECQVAINQAKVLLANAKNDAGAVLKGGKSDILLQIQQYHDESLELVDQME 60
MSS + YE + V + +A + K ++ +++ +E+ EL++QM+
Sbjct: 1 MSSDFEGYEQDFAVLTAEITSKIARVPR----LPPDEKKQMVANVEKQLEEAKELLEQMD 56
Query: 61 IELNNTGNSLDSKTRASYKAKIRDYKRQCQNEIKDPLKQLVQESD--RNKLLEGRHFDND 118
+E+ + ++R Y ++R YK++ D + + SD RN+LL ++
Sbjct: 57 LEVRE----IPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSE 112
Query: 119 EQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQTLFHADS 178
QR LL N L+RS +L+ ++A ETE +G +++ +L RE ++ AR+ L D+
Sbjct: 113 NQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDA 172
Query: 179 YVDKSIRTLKTMTRR 193
+ KS R L M RR
Sbjct: 173 NLGKSSRILTGMLRR 187
>At5g39510 [U] KOG1666 V-SNARE
Length = 221
Score = 76.3 bits (186), Expect = 3e-14
Identities = 59/208 (28%), Positives = 104/208 (49%), Gaps = 19/208 (9%)
Query: 1 MSSLLQNYESE-CQVAINQAKVLLANAKNDAGAVLKGG-KSDILLQIQQYHDESLELVDQ 58
MS + YE + C+++ + +K K + L G K L +I+ + + L+ +
Sbjct: 1 MSDVFDGYERQYCELSASLSK------KCSSAISLDGEQKKQKLSEIKSGLENAEVLIRK 54
Query: 59 MEIELNNTGNSLDSKTRASYKAKIRDYKRQCQN---EIKDPLKQLVQESDRNKLLEGRHF 115
M++E +L ++S K+R++K N E+K + + R++LLE
Sbjct: 55 MDLE----ARTLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMA 110
Query: 116 DND----EQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQ 171
D +QR +L+ + L R+ D+++D+ R ETE +G I+ DL QR++L A +
Sbjct: 111 DTKTASADQRARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHE 170
Query: 172 TLFHADSYVDKSIRTLKTMTRRLIANKF 199
TL D + KS + L MTRR+ NK+
Sbjct: 171 TLHGVDDNIGKSKKILTDMTRRMNKNKW 198
>At5g39630 [U] KOG1666 V-SNARE
Length = 207
Score = 67.8 bits (164), Expect = 1e-11
Identities = 53/193 (27%), Positives = 101/193 (51%), Gaps = 12/193 (6%)
Query: 1 MSSLLQNYESE-CQVAINQAKVLLANAKNDAGAVLKGG-KSDILLQIQQYHDESLELVDQ 58
MS++ Y+ + +++IN +K K LKGG K + L +I + + +L+ +
Sbjct: 1 MSNVFHEYDQQYSELSINLSK------KCSLAFSLKGGEKKEKLSEITYDLENAEKLISK 54
Query: 59 MEIELNNTGNSLDSKTRASYKAKIRDYKRQCQNEIKDPLKQLVQESDRNKLLEGRHFDND 118
M+ +N ++ S K KR +NEIK + ++ + R ++LE D
Sbjct: 55 MDHAASNLPPNIKSILLEKLKESKSSLKR-LRNEIKRNTSENLKVTTREEVLEAEKADLA 113
Query: 119 EQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLENARQTLFHADS 178
+QR +L+ + L R+ + ++D+ R ETEN+G I+ +L+ Q+E+L+N++ L D
Sbjct: 114 DQRSRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDD 173
Query: 179 YVDKS---IRTLK 188
V +S +R++K
Sbjct: 174 TVKESRSIVRSIK 186
>Hs5454166 [U] KOG1666 V-SNARE
Length = 232
Score = 57.8 bits (138), Expect = 1e-08
Identities = 44/174 (25%), Positives = 84/174 (47%), Gaps = 17/174 (9%)
Query: 38 KSDILLQIQQYHDESLELVDQMEIELNNTGNSLDSKTRASYKAKIRDYKR---QCQNEIK 94
K ++ + E+ E + +ME EL S R +K+R+Y++ + E++
Sbjct: 41 KKKLIRDFDEKQQEANETLAEMEEELRYAPLSF----RNPMMSKLRNYRKDLAKLHREVR 96
Query: 95 D-PLKQLVQESDRNKLLEGRHFDNDEQRQQLLSNHALLQRSGDKLQDAT-------RLAS 146
PL R + G + +E +L S A+L + + L AT R+A+
Sbjct: 97 STPLT--ATPGGRGDMKYGIYAVENEHMNRLQSQRAMLLQGTESLNRATQSIERSHRIAT 154
Query: 147 ETENVGAQIMMDLRSQRETLENARQTLFHADSYVDKSIRTLKTMTRRLIANKFI 200
ET+ +G++I+ +L QR+ LE + L + + KS + L++M+R++ NK +
Sbjct: 155 ETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLL 208
>Hs20475459 [U] KOG1666 V-SNARE
Length = 231
Score = 50.8 bits (120), Expect = 1e-06
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 110 LEGRHFDN-DEQRQQLLSNHALLQRSGDKLQDATRLASETENVGAQIMMDLRSQRETLEN 168
+E H + QR LL L R+ ++ + ++A+ET+ +G++ + +L QR+ LE
Sbjct: 116 VENEHMNRLQSQRAMLLQGPENLNRATQSIERSHQIATETDQIGSETIEELGEQRDHLER 175
Query: 169 ARQTLFHADSYVDKSIRTLKTMTRRLIANKFI 200
+ L + + KS + L++M+R++ NK +
Sbjct: 176 TKSRLINTTENLSKSRKILRSMSRKVTTNKLL 207
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.129 0.338
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,486,721
Number of Sequences: 60738
Number of extensions: 399661
Number of successful extensions: 1498
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1483
Number of HSP's gapped (non-prelim): 10
length of query: 221
length of database: 30,389,216
effective HSP length: 102
effective length of query: 119
effective length of database: 24,193,940
effective search space: 2879078860
effective search space used: 2879078860
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)