ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2602 good C KOG3309 Energy production and conversion Ferredoxin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2602 901566 902063 166
(166 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL252c [C] KOG3309 Ferredoxin 204 6e-53
SPAC22E12.10c_2 [C] KOG3309 Ferredoxin 132 3e-31
At4g05450 [C] KOG3309 Ferredoxin 110 1e-24
At4g21090 [C] KOG3309 Ferredoxin 108 4e-24
CE25595 [C] KOG3309 Ferredoxin 100 9e-22
Hs4758352 [C] KOG3309 Ferredoxin 84 7e-17
7292479 [C] KOG3309 Ferredoxin 80 2e-15
ECU07g0600 [C] KOG3309 Ferredoxin 73 2e-13
7294964 [C] KOG3309 Ferredoxin 65 4e-11
>YPL252c [C] KOG3309 Ferredoxin
Length = 172
Score = 204 bits (518), Expect = 6e-53
Identities = 96/123 (78%), Positives = 107/123 (86%)
Query: 43 HGHLHKPKPGEELHVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXXXXXXXXTCH 102
HGHL KPKPGEEL +TFILKDG+QKT+EV EG+++LDIAQGHNLDME TCH
Sbjct: 49 HGHLKKPKPGEELKITFILKDGSQKTYEVCEGETILDIAQGHNLDMEGACGGSCACSTCH 108
Query: 103 VIVDPDYYDALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPSMTRNVSS 162
VIVDPDYYDAL EP+DDENDMLDLAYGLTETSRLGC IKM+KDIDGIRVALP MTRNV++
Sbjct: 109 VIVDPDYYDALPEPEDDENDMLDLAYGLTETSRLGCQIKMSKDIDGIRVALPQMTRNVNN 168
Query: 163 SDF 165
+DF
Sbjct: 169 NDF 171
>SPAC22E12.10c_2 [C] KOG3309 Ferredoxin
Length = 159
Score = 132 bits (331), Expect = 3e-31
Identities = 58/119 (48%), Positives = 82/119 (68%)
Query: 42 YHGHLHKPKPGEELHVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXXXXXXXXTC 101
+H + KP PG + V F+ +G + E EGDS+LD+A +N+D+E TC
Sbjct: 34 FHSEIKKPLPGTGIKVFFVTPEGREIMIEGNEGDSILDLAHANNIDLEGACEGSVACSTC 93
Query: 102 HVIVDPDYYDALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPSMTRNV 160
HVIVDP++Y+ L+ P++DE DMLDLA+GL ETSRLGC + + KD+DGIRV +P+ TRN+
Sbjct: 94 HVIVDPEHYELLDPPEEDEEDMLDLAFGLEETSRLGCQVLLRKDLDGIRVRIPAQTRNI 152
>At4g05450 [C] KOG3309 Ferredoxin
Length = 197
Score = 110 bits (274), Expect = 1e-24
Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Query: 53 EELHVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXXXXXXXXTCHVIV-DPDYYD 111
E++ + F+ KDG + +V G S+L+ A +++D+E TCHVIV D +YY+
Sbjct: 79 EKITIIFVDKDGEEIPVKVPIGMSVLEAAHENDIDLEGACEASLACSTCHVIVMDTEYYN 138
Query: 112 ALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPSMTRNVSSSDF 165
LEEP D+ENDMLDLA+GLTETSRLGC + ++DG+R+A+PS TRN + F
Sbjct: 139 KLEEPTDEENDMLDLAFGLTETSRLGCQVIARPELDGVRLAIPSATRNFAVDGF 192
>At4g21090 [C] KOG3309 Ferredoxin
Length = 154
Score = 108 bits (269), Expect = 4e-24
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Query: 53 EELHVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXXXXXXXXTCHVIV-DPDYYD 111
E+++VTF+ KDG + +V G ++L+ A +++++E TCHVIV D YY+
Sbjct: 36 EKINVTFVDKDGEEIHIKVPVGMNILEAAHENDIELEGACEGSLACSTCHVIVMDTKYYN 95
Query: 112 ALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPSMTRNVSSSDF 165
LEEP D+ENDMLDLA+GLT TSRLGC + ++DG+R+A+PS TRN + F
Sbjct: 96 KLEEPTDEENDMLDLAFGLTATSRLGCQVIAKPELDGVRLAIPSATRNFAVDGF 149
>CE25595 [C] KOG3309 Ferredoxin
Length = 169
Score = 100 bits (249), Expect = 9e-22
Identities = 47/112 (41%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Query: 49 PKPGEEL-HVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXXXXXXXXTCHVIVDP 107
PK +E+ ++T++L+DGT++ GD+++ +A ++++ME TCHV VDP
Sbjct: 47 PKSEDEVVNITYVLRDGTERKIRGKVGDNVMFLAHRYDIEMEGACEASLACSTCHVYVDP 106
Query: 108 DYYDALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPSMTRN 159
+ + L EP ++E+DMLD+A L + SRLGC I + K++DGI V LP+MTRN
Sbjct: 107 AFQNKLPEPLEEEDDMLDMAPALKDNSRLGCQIVLTKELDGITVTLPTMTRN 158
>Hs4758352 [C] KOG3309 Ferredoxin
Length = 184
Score = 84.3 bits (207), Expect = 7e-17
Identities = 45/113 (39%), Positives = 65/113 (56%), Gaps = 2/113 (1%)
Query: 53 EELHVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXX--XXXXXXTCHVIVDPDYY 110
+++ V FI +DG T + GDSLLD+ +NLD++ TCH+I + Y
Sbjct: 65 DKITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIY 124
Query: 111 DALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPSMTRNVSSS 163
+ L+ D+ENDMLDLAYGLT+ SRLGC I + K +D + V +P + S
Sbjct: 125 EKLDAITDEENDMLDLAYGLTDRSRLGCQICLTKSMDNMTVRVPETVADARQS 177
>7292479 [C] KOG3309 Ferredoxin
Length = 158
Score = 79.7 bits (195), Expect = 2e-15
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 49 PKPGEELHVTFILKDGTQKTFEVAEGDSLLDIAQGHNLDMEXXXX--XXXXXXTCHVIVD 106
P+ + +++TF+ +G + GDSLLD+ +N+D++ TCH+I
Sbjct: 41 PRALQCVNITFVRANGDKIKTSGKVGDSLLDVVVNNNVDLDGFGACEGTLTCSTCHLIFK 100
Query: 107 PDYYDAL-EEPDDDENDMLDLAYGLTETSRLGCCIKMNKDIDGIRVALPS 155
++ L ++P D+E DMLDLAY LT+TSRLGC I ++KD++G+ V +PS
Sbjct: 101 TSDFEKLPDKPGDEELDMLDLAYELTDTSRLGCQITLSKDMEGLEVHVPS 150
>ECU07g0600 [C] KOG3309 Ferredoxin
Length = 128
Score = 72.8 bits (177), Expect = 2e-13
Identities = 33/93 (35%), Positives = 54/93 (57%)
Query: 74 GDSLLDIAQGHNLDMEXXXXXXXXXXTCHVIVDPDYYDALEEPDDDENDMLDLAYGLTET 133
G ++LD+A + +D+E TCHVI++ Y L EP D E D++D A+G T T
Sbjct: 32 GSTVLDVAHKNGVDLEGACEGNLACSTCHVILEEPLYRKLGEPSDKEYDLIDQAFGATGT 91
Query: 134 SRLGCCIKMNKDIDGIRVALPSMTRNVSSSDFE 166
SRLGC ++++K + +P T+N++ F+
Sbjct: 92 SRLGCQLRVDKSFENAVFTVPRATKNMAVDGFK 124
>7294964 [C] KOG3309 Ferredoxin
Length = 83
Score = 65.1 bits (157), Expect = 4e-11
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 88 MEXXXXXXXXXXTCHVIVDPDYYDALEEPDDDENDMLDLAYGLTETSRLGCCIKMNKDID 147
ME TCHV V DY L+E ++ E+D+LD+A L E SRLGC I ++K ++
Sbjct: 1 MEGACEASLACTTCHVYVQHDYLQKLKEAEEQEDDLLDMAPFLRENSRLGCQILLDKSME 60
Query: 148 GIRVALPSMTRN 159
G+ + LP TRN
Sbjct: 61 GMELELPKATRN 72
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,201,920
Number of Sequences: 60738
Number of extensions: 407116
Number of successful extensions: 976
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 963
Number of HSP's gapped (non-prelim): 9
length of query: 166
length of database: 30,389,216
effective HSP length: 98
effective length of query: 68
effective length of database: 24,436,892
effective search space: 1661708656
effective search space used: 1661708656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)