ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2973 good A KOG0922 RNA processing and modification DEAH-box RNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2973 1023926 1020594 -1111
(1111 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER013w [A] KOG0922 DEAH-box RNA helicase 1293 0.0
SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase 918 0.0
CE01889 [A] KOG0922 DEAH-box RNA helicase 878 0.0
Hs4826690 [A] KOG0922 DEAH-box RNA helicase 875 0.0
At3g26560 [A] KOG0922 DEAH-box RNA helicase 872 0.0
7303231 [A] KOG0922 DEAH-box RNA helicase 861 0.0
7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 699 0.0
At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 685 0.0
At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 674 0.0
Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 671 0.0
Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 665 0.0
CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 657 0.0
Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 655 0.0
At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA hel... 655 0.0
CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 647 0.0
At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA hel... 627 e-179
At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 616 e-176
At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 608 e-173
SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA ... 596 e-170
7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 586 e-167
YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 582 e-165
YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 579 e-165
Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 571 e-162
CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase 569 e-161
Hs20544129 [A] KOG0922 DEAH-box RNA helicase 568 e-161
SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase 520 e-147
At1g26370 [A] KOG0922 DEAH-box RNA helicase 509 e-144
Hs20336302 [A] KOG0922 DEAH-box RNA helicase 504 e-142
7295673 [A] KOG0922 DEAH-box RNA helicase 499 e-141
YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase 497 e-140
At1g27900 [A] KOG0922 DEAH-box RNA helicase 493 e-139
7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 491 e-138
CE27311 [A] KOG0922 DEAH-box RNA helicase 491 e-138
Hs21362038 [A] KOG0922 DEAH-box RNA helicase 474 e-133
SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA h... 464 e-130
ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA he... 433 e-121
SPAC145.03 [A] KOG0922 DEAH-box RNA helicase 426 e-118
7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 414 e-115
YKL078w [A] KOG0922 DEAH-box RNA helicase 412 e-114
ECU11g0860 [A] KOG0922 DEAH-box RNA helicase 389 e-107
Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 361 3e-99
SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA h... 349 2e-95
Hs22066120 [A] KOG0922 DEAH-box RNA helicase 345 2e-94
At5g10370_1 [A] KOG0922 DEAH-box RNA helicase 345 3e-94
SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase 338 2e-92
At4g01020_1 [A] KOG0922 DEAH-box RNA helicase 336 1e-91
Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A 312 2e-84
At1g48650 [A] KOG0920 ATP-dependent RNA helicase A 312 2e-84
At2g35920 [A] KOG0920 ATP-dependent RNA helicase A 311 4e-84
CE27603 [A] KOG0922 DEAH-box RNA helicase 298 3e-80
ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA he... 294 6e-79
7298709 [A] KOG0920 ATP-dependent RNA helicase A 279 2e-74
7293584_2 [A] KOG0922 DEAH-box RNA helicase 273 8e-73
YLR419w [A] KOG0920 ATP-dependent RNA helicase A 258 3e-68
Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA he... 254 7e-67
Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A 249 1e-65
Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A 249 1e-65
Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A 249 1e-65
SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A 244 5e-64
SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A 241 5e-63
At1g58050 [A] KOG0920 ATP-dependent RNA helicase A 238 3e-62
7293336 [A] KOG0920 ATP-dependent RNA helicase A 231 4e-60
7302201 [K] KOG0921 Dosage compensation complex subunit MLE 227 9e-59
CE13245 [A] KOG0922 DEAH-box RNA helicase 220 8e-57
ECU04g0250 [A] KOG0922 DEAH-box RNA helicase 215 4e-55
Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE 211 5e-54
At1g33390 [AJ] KOG0926 DEAH-box RNA helicase 196 2e-49
7292573 [A] KOG0920 ATP-dependent RNA helicase A 194 5e-49
Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A 191 4e-48
Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A 190 9e-48
At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA hel... 188 4e-47
At2g01130 [A] KOG0920 ATP-dependent RNA helicase A 188 4e-47
YMR128w [AJ] KOG0926 DEAH-box RNA helicase 185 4e-46
At1g58060 [A] KOG0920 ATP-dependent RNA helicase A 182 2e-45
At4g18470_2 [A] KOG0922 DEAH-box RNA helicase 174 5e-43
7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase 172 2e-42
7290296 [AJ] KOG0926 DEAH-box RNA helicase 169 3e-41
At1g06670 [A] KOG0920 ATP-dependent RNA helicase A 164 7e-40
At2g47680 [A] KOG0920 ATP-dependent RNA helicase A 162 2e-39
Hs7661934 [A] KOG0922 DEAH-box RNA helicase 159 2e-38
CE29563 [AJ] KOG0926 DEAH-box RNA helicase 159 2e-38
At2g30800 [A] KOG0920 ATP-dependent RNA helicase A 157 7e-38
Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A 154 6e-37
7300065 [A] KOG0920 ATP-dependent RNA helicase A 154 6e-37
CE05718 [A] KOG0920 ATP-dependent RNA helicase A 151 5e-36
CE18218 [K] KOG0921 Dosage compensation complex subunit MLE 134 8e-31
HsM13375825 [A] KOG0922 DEAH-box RNA helicase 98 8e-20
Hs12383070_1 [A] KOG0920 ATP-dependent RNA helicase A 86 4e-16
Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE 81 1e-14
Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE 63 2e-09
7291654 [A] KOG0920 ATP-dependent RNA helicase A 62 5e-09
Hs17433962 [A] KOG0920 ATP-dependent RNA helicase A 55 5e-07
>YER013w [A] KOG0922 DEAH-box RNA helicase
Length = 1145
Score = 1293 bits (3345), Expect = 0.0
Identities = 673/1156 (58%), Positives = 832/1156 (71%), Gaps = 56/1156 (4%)
Query: 1 MSDVKKEICKVLGLDDEIVADFXXXXXXXXXXXXEFKKKLLEMDQDLSAAVVSDIYD--- 57
MSD+ K I ++G DD ++ +F EF + + ++D +S +Y+
Sbjct: 1 MSDISKLIGAIVGSDDPVIIEFVLNIINKSGNLQEFIRNIQKLDAGISYEDSIKMYNAFL 60
Query: 58 -------VVNKTAGSTAATRVKTLLAEQLDVHDDVVTNFIMDICSKSETLLKFRAKLKEM 110
V NK S + ++ +L + +++ D VVT F++ I +KS+++ +F+ +L M
Sbjct: 61 GKQEEEKVRNKVKSSPLSQKINQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQEQLNLM 120
Query: 111 EAGVSDSLALRIFNIVHSSNVAVKTEIEDTKSALSLPNTTVSWEGIEEKASNKSRFRKNE 170
++G+ + +I+ I +S +K E+ LP+T + + IE K + +K E
Sbjct: 121 QSGLDNETIFKIYQI--ASPPVMKEEVS------VLPSTKIPAK-IEAKIEEE--VQKIE 169
Query: 171 TVDPEPVLDKVYPGKVQNVTKFGCFVRIFGVRNTNVDGXXXXXXXXXXXXDKPEDVVHRN 230
++DP PVL KVY GKV+N+T FGCFV+IFG R N DG P DVV +
Sbjct: 170 SLDPSPVLHKVYEGKVRNITTFGCFVQIFGTRMKNCDGLVHISEMSDQRTLDPHDVVRQG 229
Query: 231 QDVFVKVIKIQNNGKISLAMKGIDQSTGM-------EAATRGRTKE--------KVIPKR 275
Q +FV+VIKIQNNGKISL+MK IDQ +G RGR+ + I +R
Sbjct: 230 QHIFVEVIKIQNNGKISLSMKNIDQHSGEIRKRNTESVEDRGRSNDAHTSRNMKNKIKRR 289
Query: 276 KLTSPERWEIRQLISSGAASIEDYPELKDDY--NISQPTNSEADGTXXXXXXXXXXXXXX 333
LTSPERWEIRQLI+SGAASI+DYPELKD+ N S T DG+
Sbjct: 290 ALTSPERWEIRQLIASGAASIDDYPELKDEIPINTSYLTAKRDDGSIVNGNTEKVDSKLE 349
Query: 334 ---------------XXXXPKFLKGQ-VKPDRKYELPSITKVPKGSLNRSAMVGSYTMXX 377
PKFLK Q VK +KYE+P ITKVP+G +NRSA+ GS +
Sbjct: 350 EQQRDETDEIDVELNTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRD 409
Query: 378 XXXXXXXXXXXXXXQLNKSKQLADPSSSKVLSNSEFDA--RQLVATAWERSRMKERVSYG 435
Q+ K + DP+ +K S +E QL+ T WE++RM E +SYG
Sbjct: 410 HREEKLRKKREIEQQIRKQQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYG 469
Query: 436 KRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG 495
KRTSLPI QR+ LPVY MR +LI AV NQFLVIVGETGSGKTTQ+TQYLDEEG SN G
Sbjct: 470 KRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYG 529
Query: 496 MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREAL 555
MIGCTQP EE+GC VG +VGYTIRFED T TRIKY+TDGM+QREAL
Sbjct: 530 MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREAL 589
Query: 556 LDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMN 615
LDP MS+YSVI+LDEAHERTVATDVLFALLKKAA++RP+LKVI+TSATL+S KFS+YF+N
Sbjct: 590 LDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLN 649
Query: 616 CPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCE 675
CP+I IPGKTFPVEVLYS PQMDYIE+ALD +DIHINE GD+LVFLTGQEEID+CCE
Sbjct: 650 CPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCE 709
Query: 676 ILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGV 735
ILY+RVK L +I EL+ILPVYSALPSEIQS+IFEPTPKGSRKV+FATNIAETSITIDG+
Sbjct: 710 ILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGI 769
Query: 736 YYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNE 795
YYV+DPGF+KIN YN R G+EQL+VSPISQAQANQRKGRAGRTGPGKC+RLYTESAF NE
Sbjct: 770 YYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNE 829
Query: 796 MLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEG 855
ML NTVPEIQRQNL HTILMLKAMGINDLL F+FMDPPPK+ M++AL EL++LQ+LD+EG
Sbjct: 830 MLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEG 889
Query: 856 FLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNR 915
LT LGK MS FPM+P LS++LL+SV N+CSDE++TI++MLS+QNVFYRPKD+Q EAD++
Sbjct: 890 KLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSK 949
Query: 916 KARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNL 975
KA+FHHPYGDHLTLLNV+ RW+++NYS+ +C TNFLH RHLKRA DV+ Q+ IFKK+ L
Sbjct: 950 KAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGL 1009
Query: 976 PIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLY 1035
++SCH D D IRKT VSGFF NAAKR+SQ GYKT+ GT+V I P SSL+GKEY+YV+Y
Sbjct: 1010 KLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMY 1069
Query: 1036 HSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKKAKIVPLNDRFAQSKDSWR 1095
HSIVLTSREYM QVT+IE +WLLE APHFYK D SRKKAKI+PL+++FA+ ++SWR
Sbjct: 1070 HSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKKAKIIPLHNKFAKDQNSWR 1129
Query: 1096 LSSIRANRDKKLGGKR 1111
LSSIR +R++ LG KR
Sbjct: 1130 LSSIRQSRERALGIKR 1145
>SPAC10F6.02c [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 918 bits (2372), Expect = 0.0
Identities = 483/969 (49%), Positives = 641/969 (65%), Gaps = 52/969 (5%)
Query: 176 PVLDKVYPGKVQNVTKFGCFVRIFGVRNTNVDGXXXXXXXXXXXXDKPEDVVHRNQDVFV 235
P L +Y G V + FG FV + G R D P + V Q VFV
Sbjct: 204 PTLYGIYSGVVSGIKDFGAFVTLDGFRKRTDGLVHISNIQLNGRLDHPSEAVSYGQPVFV 263
Query: 236 KVIKIQNNGK-ISLAMKGIDQSTG-------MEAATRGRTKEKVIP-------------- 273
KVI+I + K ISL+MK ++Q TG + +T+ + IP
Sbjct: 264 KVIRIDESAKRISLSMKEVNQVTGEDLNPDQVSRSTKKGSGANAIPLSAQNSEIGHVNPL 323
Query: 274 -------KRKLTSPERWEIRQLISSGAASIEDYPELKDDYNISQPTNSEADGTXXXXXXX 326
+++LTSPE WE++QL +SGA S D PEL D +N TN+ A+
Sbjct: 324 ETFTSNGRKRLTSPEIWELQQLAASGAISATDIPELNDGFN----TNNAAE---INPEDD 376
Query: 327 XXXXXXXXXXXPKFLKGQVKPDRKYELPSITKVPKGSLNRSAMVGSYTMXXXXXXXXXXX 386
P FL GQ K K + K P GSL+R+AM G
Sbjct: 377 EDVEIELREEEPGFLAGQTKVSLKLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEA 436
Query: 387 XXXXXQ--------LNKSKQLADPSSSKVLSN-SEFDARQLVAT--AWERSRMKERVSYG 435
Q L+ +++P K + + ARQL + +W ++ +SYG
Sbjct: 437 KLKSEQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYG 496
Query: 436 KRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGL-SNK 494
KRT+L +KEQRE LPV+++R+Q ++AV KNQ LV++GETGSGKTTQ+TQYL EEG S+
Sbjct: 497 KRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDS 556
Query: 495 GMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREA 554
MIGCTQP EE+GC VGEEVGYTIRFED+TS T+IKY+TDGM+QRE
Sbjct: 557 KMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQREC 616
Query: 555 LLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFM 614
L+DPL+S+YSVI+LDEAHERTVATDVLF LLK L+RPDLK+I+TSATLD+++FS YF
Sbjct: 617 LVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFY 676
Query: 615 NCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCC 674
CP+ IPG+++PVE++Y+ +P+ DY+++AL T M IH++E GD+LVFLTGQEEIDT C
Sbjct: 677 KCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSC 736
Query: 675 EILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDG 734
EILYER K L +IPEL+ILPVYSALPSEIQSRIFEP P G RKV+ ATNIAETS+TIDG
Sbjct: 737 EILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDG 796
Query: 735 VYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKN 794
+YYV+DPGF K + ++P++GM+ L+V+PISQAQA QR GRAGRTGPGKC+RLYTESA++N
Sbjct: 797 IYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRN 856
Query: 795 EMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEE 854
EMLP+ +PEIQRQNL HTILMLKAMGINDLLNF+FMDPPP M++AL+ L+ L ALD+E
Sbjct: 857 EMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDE 916
Query: 855 GFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADN 914
G LT LG++M+ FPMEP LSK L+ SV CS+EML+I+AMLS+ N++ RP++KQQEAD
Sbjct: 917 GLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADR 976
Query: 915 RKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMN 974
++A+F +P DHLTLLNV+ W+ + S ++C +++ R ++RA DVR+QL + +
Sbjct: 977 QRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYR 1036
Query: 975 LPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAG-YKTLTDGTQVAISPGSSLFGKEYDYV 1033
P+VSC + I + L SG+F N AKR+S G YKT+ + V + P LFGK ++V
Sbjct: 1037 HPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWV 1096
Query: 1034 LYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPN--GSSRKKAKIVPLNDRFAQSK 1091
+YH ++ TS+EYM V+ + KWL+E AP F+K A+ N ++K K++PL +RF +
Sbjct: 1097 IYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPLYNRF-EKP 1155
Query: 1092 DSWRLSSIR 1100
D WR+S R
Sbjct: 1156 DEWRISKQR 1164
>CE01889 [A] KOG0922 DEAH-box RNA helicase
Length = 1200
Score = 878 bits (2268), Expect = 0.0
Identities = 462/990 (46%), Positives = 636/990 (63%), Gaps = 79/990 (7%)
Query: 167 RKNETVDPEPVLDKVYPGKVQNVTKFGCFVRIFGVRNTNVDGXXXXXXXXXXXXDKPEDV 226
RK+E + + K+Y G+V ++ FG F+ + G R +G DV
Sbjct: 226 RKSEVAE----IGKIYDGRVNSIQSFGAFITLEGFRQKQ-EGLVHISQIRNERVQTVADV 280
Query: 227 VHRNQDVFVKVIKIQNNGKISLAMKGIDQSTGMEAATR-----------------GRTKE 269
+ R ++V VKV KI+N GKISL+MK +DQ++G + R T
Sbjct: 281 LKRGENVKVKVNKIEN-GKISLSMKEVDQNSGEDLNPRETDLNPDAIGVRPRTPPASTSS 339
Query: 270 KVIPKR------------------KLTSPERWEIRQLISSGAASIEDYPELKDDYNISQP 311
+ P+ ++++PERWE+RQ+ +G + D P+ ++ + +
Sbjct: 340 WMNPEASGVGQGPSTSIGGGKARVRISTPERWELRQMQGAGVLTATDMPDFDEEMGVLRN 399
Query: 312 TNSEADGTXXXXXXXXXXXXXXXXXXPKFLKGQVKPDRKYELPSITKVPKGSLNRSAMVG 371
+ E+DG P FL+G K + E + K P GSL ++A++
Sbjct: 400 YDDESDGEDIEIELVEDE--------PDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALM- 450
Query: 372 SYTMXXXXXXXXXXXXXXXXQLNKSKQLADPSSSKVLSNSEFDARQLVATAWERSRMKER 431
+ + Q S++++L + +TAW K+R
Sbjct: 451 ---QGALSKERKETKIQAQRERDMDTQKGFSSNARILDPMSGNQ----STAWSADESKDR 503
Query: 432 -------------------VSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVG 472
+YG+RT+L + EQRE LP++ +++ L++A+I NQ LV+VG
Sbjct: 504 NNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVVG 563
Query: 473 ETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRF 532
ETGSGKTTQ+TQY E GL +G IGCTQP EE GC +G +VGYTIRF
Sbjct: 564 ETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRF 623
Query: 533 EDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQR 592
ED TS T IKY+TDGM+ RE L+DP +S YS+I+LDEAHERT+ TDVLF LLK AA +R
Sbjct: 624 EDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
Query: 593 PDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIH 652
P+LK+IITSATLDS KFS+YF+ P+ IPG+TFPVE+LY+ +P+ DY+E+A T M IH
Sbjct: 684 PELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIH 743
Query: 653 INEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPT 712
+ EP GDVLVFLTGQEEIDT CE+LYER+K++ +PELIILPVY ALPSE+Q+RIF+P
Sbjct: 744 LTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPA 803
Query: 713 PKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRK 772
P G RKV+ ATNIAETS+TIDG++YV+DPGF K YNP+ GM+ L+V+PISQA A QR
Sbjct: 804 PAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRS 863
Query: 773 GRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDP 832
GRAGRTGPGKC+RLYTE AF++EMLP VPEIQR NL T+L LKAMGIN+L++F+FMD
Sbjct: 864 GRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFMDA 923
Query: 833 PPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTI 892
PP M++AL L L ALD +G LT LG+RM++FP+EP LSK L+ SV CS+E+LTI
Sbjct: 924 PPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTI 983
Query: 893 VAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLH 952
VAML++QN+FYRPK+KQ AD +KA+FH P GDHLTLL V+N W+ ++S+ +C NF+
Sbjct: 984 VAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQ 1043
Query: 953 ERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLT 1012
R +KRA D+R+QL I + L +VSC DV ++K + SGFFRNAAKR+ Q GY+TLT
Sbjct: 1044 VRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLT 1103
Query: 1013 DGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNG 1072
DG V I P S+ F ++ ++V+YH +V+T++EYM +VTAI+ KWL+E AP F+K+ D
Sbjct: 1104 DGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTK 1163
Query: 1073 SS--RKKAKIVPLNDRFAQSKDSWRLSSIR 1100
S ++ KI PL D++A + ++WR++ ++
Sbjct: 1164 LSTFKRNQKIDPLFDKYADA-NAWRITRVK 1192
>Hs4826690 [A] KOG0922 DEAH-box RNA helicase
Length = 1220
Score = 875 bits (2260), Expect = 0.0
Identities = 460/993 (46%), Positives = 636/993 (63%), Gaps = 80/993 (8%)
Query: 162 NKSRFRKNETVDP---EPVLDKVYPGKVQNVTKFGCFVRIFGVRNTNVDGXXXXXXXXXX 218
N R+R P EP + +Y GKV ++ +FGCFV++ G+R
Sbjct: 245 NLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREG 304
Query: 219 XXDKPEDVVHRNQDVFVKVIKIQNNGKISLAMKGIDQSTGMEAATR------GRTKEKV- 271
DVV + Q V VKV+ K SL+MK +DQ TG + G T E+
Sbjct: 305 RVANVADVVSKGQRVKVKVLSFTGT-KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETS 363
Query: 272 ----------------------IPKRKLT---SPERWEIRQLISSGAASIEDYPELKDDY 306
+ +++LT PE+WEI+Q+I++ S E++P+ ++
Sbjct: 364 MRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEET 423
Query: 307 NISQPTNSEADGTXXXXXXXXXXXXXXXXXXPKFLKGQVKPDRKYELPSITKVPKGSLNR 366
I + E D P FL+G K I K P GSL++
Sbjct: 424 GILPKVDDEED---------EDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQ 474
Query: 367 SAMVGSYTMXXXXXXXXXXXXXXXXQLNKSKQLADPSSSKVLSNSEF-------DARQLV 419
+AM+ S +L ++++ A+ S + N + + RQ+
Sbjct: 475 AAMMQS------------ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIA 522
Query: 420 AT------------AWERSRM-KERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQ 466
A W++ + SYGK+T + I EQRE LP+Y++++QL+ AV NQ
Sbjct: 523 ANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQ 582
Query: 467 FLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEV 526
L+++GETGSGKTTQ+TQYL E G +++G IGCTQP EE GC +G+EV
Sbjct: 583 ILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEV 642
Query: 527 GYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLK 586
GYTIRFED TS T IKY+TDGM+ RE L+DP +++Y++I+LDEAHERT+ TDVLF LLK
Sbjct: 643 GYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLK 702
Query: 587 KAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALD 646
K +R D+K+I+TSATLD+ KFS+YF P+ IPG+T+PVE+LY+ +P+ DY++++L
Sbjct: 703 KTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLI 762
Query: 647 TTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQS 706
T M IH+ EP GD+LVFLTGQEEIDT CEILYER+K+L +PELIILPVYSALPSE+Q+
Sbjct: 763 TVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQT 822
Query: 707 RIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQA 766
RIF+P P GSRKV+ ATNIAETS+TIDG+YYV+DPGF K YN + G++QL+V+PISQA
Sbjct: 823 RIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQA 882
Query: 767 QANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLN 826
QA QR GRAGRTGPGKC+RLYTE A+++EML VPEIQR NL T+L LKAMGINDLL+
Sbjct: 883 QAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLS 942
Query: 827 FEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCS 886
F+FMD PP +++A+E+L+ L ALD+EG LT LG+RM++FP+EP L K L+ SV CS
Sbjct: 943 FDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCS 1002
Query: 887 DEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFC 946
+EMLTIV+MLS+QNVFYRPKDKQ AD +KA+FH GDHLTLL V+N W+ + +S +C
Sbjct: 1003 EEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWC 1062
Query: 947 TTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQA 1006
NF+ R L+RA D+R+Q+ I + L +VSC ++K + SGFFRNAAK++ Q
Sbjct: 1063 YENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQE 1122
Query: 1007 GYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYK 1066
GY+TL D V I P S+LF ++ ++V+YH +VLT++EYM +VT I+ +WL+E AP F+K
Sbjct: 1123 GYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 1182
Query: 1067 VADPN--GSSRKKAKIVPLNDRFAQSKDSWRLS 1097
V+DP +K+ ++ PL +R+ + ++WR+S
Sbjct: 1183 VSDPTKLSKQKKQQRLEPLYNRY-EEPNAWRIS 1214
>At3g26560 [A] KOG0922 DEAH-box RNA helicase
Length = 1168
Score = 872 bits (2253), Expect = 0.0
Identities = 465/1001 (46%), Positives = 646/1001 (64%), Gaps = 68/1001 (6%)
Query: 154 EGIEEKASNKSRFRKNETVDP------EPVLDKVYPGKVQNVTKFGCFVRIFGVRNTNVD 207
+G E + + R K+E V+ EP L +VY G+V V GCFV+ R +
Sbjct: 183 DGGEGEDRRRDRRAKDEYVEEDKGGANEPELYQVYKGRVTRVMDAGCFVQFDKFRGK--E 240
Query: 208 GXXXXXXXXXXXXDKPEDVVHRNQDVFVKVIKIQNNGKISLAMKGIDQSTGMEA------ 261
G DK ++ V R+ +V+VKVI I ++ K SL+M+ +DQ+TG +
Sbjct: 241 GLVHVSQMATRRVDKAKEFVKRDMEVYVKVISISSD-KYSLSMRDVDQNTGRDLIPLRKP 299
Query: 262 -----ATRG----RTKEKVI---------------------PKRKLTSPERWEIRQLISS 291
++R RTK+ + P +K++SPERWE +QLI+S
Sbjct: 300 SDEDDSSRSNPSYRTKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIAS 359
Query: 292 GAASIEDYPELKDDYN--ISQPTNSEADGTXXXXXXXXXXXXXXXXXXPKFLKGQVKPDR 349
G ++++P +D + + Q +E + P FL+GQ +
Sbjct: 360 GVLRVDEFPMYDEDGDGMLYQEEGAEEE-----------LEIEMNEDEPAFLQGQTRYSV 408
Query: 350 KYELPSITKVPKGSLNRSAMVGSYTMXXXXXXXXXXXXXXXXQLNK--SKQLADPSSSKV 407
I K P+GSL+R+A + S + K ++ DP
Sbjct: 409 DMSPVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETG 468
Query: 408 LSNSEFDARQLVATA-----WERSRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAV 462
+ + R + +A W++ + ++G+R+ L I+EQRE LP+Y+++++LI AV
Sbjct: 469 ERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAV 528
Query: 463 IKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNV 522
NQ LV++GETGSGKTTQ+TQYL E G + KG IGCTQP EE GC +
Sbjct: 529 HDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRL 588
Query: 523 GEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLF 582
GEEVGY IRFED T T IKY+TDGM+ RE L+D +S+YSVI+LDEAHERT+ TDVLF
Sbjct: 589 GEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLF 648
Query: 583 ALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIE 642
LLKK +R DL++I+TSATLD++KFS YF NC + IPG+TFPVE+LY+ +P+ DY++
Sbjct: 649 GLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLD 708
Query: 643 SALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPS 702
+AL T + IH+ EP+GD+LVFLTGQEEID+ C+ LYER+K L +PELIILPVYSALPS
Sbjct: 709 AALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPS 768
Query: 703 EIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSP 762
E+QSRIF+P P G RKV+ ATNIAE S+TIDG+YYV+DPGF+K N YNP+ G+E L+++P
Sbjct: 769 EMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITP 828
Query: 763 ISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGIN 822
ISQA A QR GRAGRTGPGKC+RLYTESA++NEM P ++PEIQR NL T L +KAMGIN
Sbjct: 829 ISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGIN 888
Query: 823 DLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVT 882
DLL+F+FMDPP ++SA+E+L++L ALDEEG LT LG++M++FP+EP LSK LLASV
Sbjct: 889 DLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVD 948
Query: 883 NKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYS 942
CSDE+LT++AM+ N+FYRP++KQ +AD ++A+F P GDHLTLL V+ W+ N+S
Sbjct: 949 LGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS 1008
Query: 943 KSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKR 1002
+C NF+ R L+RA DVR+QL +I K L +V+ + IRK + +GFF + A++
Sbjct: 1009 GPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARK 1068
Query: 1003 ESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAP 1062
+ Q GY+TL + V I P S+LF ++ D+V+YH +V+T++EYM +VT I+ KWL+E AP
Sbjct: 1069 DPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAP 1128
Query: 1063 HFYKVADPNGSSRKK--AKIVPLNDRFAQSKDSWRLSSIRA 1101
F+KV+DP S++K +I PL DR+ +SWRLS RA
Sbjct: 1129 RFFKVSDPTKMSKRKRQERIEPLYDRY-HEPNSWRLSKRRA 1168
>7303231 [A] KOG0922 DEAH-box RNA helicase
Length = 1242
Score = 861 bits (2225), Expect = 0.0
Identities = 460/975 (47%), Positives = 617/975 (63%), Gaps = 58/975 (5%)
Query: 175 EPVLDKVYPGKVQNVTKFGCFVRIFGVRNTNVDGXXXXXXXXXXXXDKPEDVVHRNQDVF 234
+P K+Y GK+ N+ FGCFV++FG+R +VV RNQ V
Sbjct: 281 DPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVK 340
Query: 235 VKVIKIQNNGKISLAMKGIDQSTGMEA--------------------------------- 261
VKV+ I K+SL+MK +DQ +G +
Sbjct: 341 VKVMSITGQ-KVSLSMKEVDQDSGKDLNPLSHAPEDDESLRDRNPDGPFSSSTSMLNLQG 399
Query: 262 -ATRGRTKEKVIPKRKLTSPERWEIRQLISSGAASIEDYPELKDDYNI-SQPTNSEADGT 319
G E +++SPERWEI+Q+ISSG + P+ ++ + + + EAD
Sbjct: 400 NGMEGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPKDEDDEAD-- 457
Query: 320 XXXXXXXXXXXXXXXXXXPKFLKGQVKPDRKYELPSITKVPKGSLNRSAMVGSYTMXXXX 379
P FL G + I K P GSL ++AM+ S
Sbjct: 458 ---------IEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERR 508
Query: 380 XXXXXXXXXXXXQLNKS--KQLADPSSSKVLSNSEFDARQLVATAWERSRMKERV----- 432
+ S K DP + + R + A E K+ V
Sbjct: 509 EQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKK 568
Query: 433 -SYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGL 491
S+GK+T L + EQR+ LP+Y++R LI AV NQ L+++GETGSGKTTQ+TQYL E G
Sbjct: 569 SSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGF 628
Query: 492 SNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQ 551
+ +G IGCTQP EE GC +G+EVGYTIRFED TS T IKY+TDGM+
Sbjct: 629 TARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLL 688
Query: 552 REALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSK 611
RE L++ + YSVI+LDEAHERT+ TDVLF LLK A +RP+LK+I+TSATLD+ KFS+
Sbjct: 689 RECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQ 748
Query: 612 YFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEID 671
YF P+ IPG+TFPVEVLY+ +P+ DY++++L T M IH+ EP GD+L+FLTGQEEID
Sbjct: 749 YFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEID 808
Query: 672 TCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSIT 731
T CEILYER+K+L +PELIILPVYSALPSE+Q+RIF+P P GSRKV+ ATNIAETS+T
Sbjct: 809 TACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLT 868
Query: 732 IDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESA 791
IDG++YV+DPGF K YN + GM+ L+V+PISQA A QR GRAGRTGPGK +RLYTE A
Sbjct: 869 IDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERA 928
Query: 792 FKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQAL 851
+++EMLP VPEIQR NL T+L LK MGINDLL+F+FMD PP +V ALE+L +L AL
Sbjct: 929 YRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSAL 988
Query: 852 DEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQE 911
D+EG LT LG+RM++FP+EP LSK L+ SV +CSDE+LTIV+MLS+QNVFYRPKDKQ
Sbjct: 989 DDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQAL 1048
Query: 912 ADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFK 971
AD +KA+F+ GDHLTLL V+N W+ + +S ++C NF+ R LKR+ DVR+QL I
Sbjct: 1049 ADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMD 1108
Query: 972 KMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYD 1031
+ L +VS + I+K + SGFFRNAAK++ Q GY+TL D V I P S+LF ++ +
Sbjct: 1109 RHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPE 1168
Query: 1032 YVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSS--RKKAKIVPLNDRFAQ 1089
+V+YH +V T++EYM +VT I+ KWL+E AP F++ +DP S +K ++ PL +++ +
Sbjct: 1169 WVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKY-E 1227
Query: 1090 SKDSWRLSSIRANRD 1104
++WR+S +R R+
Sbjct: 1228 EPNAWRISRVRRRRN 1242
>7298547 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 894
Score = 699 bits (1803), Expect = 0.0
Identities = 352/689 (51%), Positives = 481/689 (69%), Gaps = 5/689 (0%)
Query: 406 KVLSNSEFDARQLVATAWERSRMKER---VSYGKRTSLPIKEQRERLPVYRMRQQLIDAV 462
++L + + D Q + R + R ++ +R L + E R LPVY ++ LI AV
Sbjct: 206 ELLLDDQIDFIQALTLDGSREKSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAV 265
Query: 463 IKNQFLVIVGETGSGKTTQLTQYLDEEGLS-NKGMIGCTQPXXXXXXXXXXXXXEEMGCN 521
++Q L+I GETGSGKTTQ+ QYL E G + +K MIGCTQP EEMG
Sbjct: 266 KEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVK 325
Query: 522 VGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVL 581
+G EVGY+IRFED TS RT +KY+TDG + RE L +P ++ YSV+++DEAHERT+ TD+L
Sbjct: 326 LGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDIL 385
Query: 582 FALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYI 641
F L+K A RP+LK++I+SATLD++KFS +F + P+ IPG+ +PV++ Y+ P+ DYI
Sbjct: 386 FGLVKDIARFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYI 445
Query: 642 ESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALP 701
++ + + IH +P GD+LVFLTGQ+EI+TC E+L++RVK L I ELI++PVY+ LP
Sbjct: 446 DACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLP 505
Query: 702 SEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVS 761
S++Q++IFEPTP +RKVI ATNIAETS+TID + YVIDPGF+K N +N R GME L+V
Sbjct: 506 SDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVV 565
Query: 762 PISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGI 821
PIS+A ANQR GRAGRT PGKCFRLYT A+K+E+ NTVPEIQR NL + +LMLKA+GI
Sbjct: 566 PISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGI 625
Query: 822 NDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASV 881
NDL++F+F+DPPP +V ALE+L+ L AL+ G LT LG+RM++FP++P + K LLAS
Sbjct: 626 NDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASE 685
Query: 882 TNKCSDEMLTIVAMLSIQN-VFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESN 940
KCS+EM+TI AMLS+ + +FYRPKDK AD + F+H +GDHL+LL V+N+W E++
Sbjct: 686 KYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETD 745
Query: 941 YSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAA 1000
YS +C NF+ R +KRA DVR+QL + +++ + +VSC + +RK +G+F + A
Sbjct: 746 YSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSCLPETVNVRKAATAGYFYHVA 805
Query: 1001 KRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLES 1060
+ YKT+ V I P SSLF + +VLYH +V TS+EYM QV IESKWLLE
Sbjct: 806 RLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHELVFTSKEYMRQVIEIESKWLLEV 865
Query: 1061 APHFYKVADPNGSSRKKAKIVPLNDRFAQ 1089
APH+YK + S+ KK V AQ
Sbjct: 866 APHYYKAKELEDSTNKKMPKVAGRAEMAQ 894
>At1g32490 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1038
Score = 685 bits (1768), Expect = 0.0
Identities = 330/638 (51%), Positives = 463/638 (71%), Gaps = 2/638 (0%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
++E R LP+Y R QL+ AV ++Q LVIVG+TGSGKTTQ+ QYL E G + +G +GCTQ
Sbjct: 391 LQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQ 450
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P +EMG +G EVGY+IRFED TS +T +KY+TDGM+ RE L +P ++
Sbjct: 451 PRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLA 510
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEI 621
YSV+++DEAHERT++TD+LF L+K A RPDLK++I+SAT+D++KFS YF P+
Sbjct: 511 SYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSF 570
Query: 622 PGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERV 681
PG+ +PVE+ Y+S P+ DY+++A+ T + IH+ EP GD+LVF TGQEEI+T EIL R+
Sbjct: 571 PGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRI 630
Query: 682 KALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDP 741
+ L I ELII P+Y+ LPSE+Q++IFEPTP+G+RKV+ ATNIAETS+TIDG+ YV+DP
Sbjct: 631 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 690
Query: 742 GFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTV 801
GFSK+ +YNPR GME LL++PIS+A A QR GRAGRT PGKC+RLYT + N++ NTV
Sbjct: 691 GFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTV 750
Query: 802 PEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLG 861
PE+QR NL +L LK++GI+DL+NF+FMDPPP +V +LE LF L AL++ G LT G
Sbjct: 751 PEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAG 810
Query: 862 KRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSI-QNVFYRPKDKQQEADNRKARFH 920
+RM++FP++P LSK ++ S KCSDE+++I AMLSI ++FYRPKDKQ ADN + FH
Sbjct: 811 RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFH 870
Query: 921 -HPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVS 979
GDH+ LL V++ W+E+N+S +C N++ R +KRA D+R QL + +++ + I S
Sbjct: 871 TGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISS 930
Query: 980 CHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIV 1039
++D +RK++V+GFF + AK + Y+T+ V I P S L +V+YH +V
Sbjct: 931 NLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELV 990
Query: 1040 LTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKK 1077
LTS+EYM QVT ++ +WL+E APH+Y++ D ++ KK
Sbjct: 991 LTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1028
>At2g35340 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1087
Score = 674 bits (1739), Expect = 0.0
Identities = 326/636 (51%), Positives = 455/636 (71%), Gaps = 2/636 (0%)
Query: 444 EQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPX 503
E R+ LP+Y R QL++AV +Q L+IVGETGSGKTTQ+ QYL E G + G +GCTQP
Sbjct: 442 EDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPR 501
Query: 504 XXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRY 563
+EMG +G EVGY+IRFED TS +T +KY+TDGM+ RE L +P + Y
Sbjct: 502 RVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSY 561
Query: 564 SVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPG 623
SVI++DEAHERT+ TD+LF L+K A RPDLK++I+SAT+D++KFS +F P+ PG
Sbjct: 562 SVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPG 621
Query: 624 KTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKA 683
+ +PV++ +++ P+ DY+++A+ T + IH+ EP GDVLVFL GQEEI+ E L +++
Sbjct: 622 RRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRG 681
Query: 684 LDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGF 743
L I ELII P+Y+ LPSE+Q++IFEPTP+G+RKV+ ATNIAETS+TIDG+ YV+DPGF
Sbjct: 682 LGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGF 741
Query: 744 SKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPE 803
SK+ +YNPR GME LLV+PIS+A A QR GRAGRT PGKC+RLYT + N++ NTVPE
Sbjct: 742 SKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPE 801
Query: 804 IQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKR 863
IQR NL +L LK++GI++LLNF+FMDPPP ++ +LE LF L AL++ G LT G+R
Sbjct: 802 IQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRR 861
Query: 864 MSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSI-QNVFYRPKDKQQEADNRKARFH-H 921
M++FP++P LSK ++ S KCSDE+++I AMLSI ++FYRPKDKQ ADN FH
Sbjct: 862 MAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVG 921
Query: 922 PYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCH 981
GDH+ L ++N W+E+NYS +C N++ R +KRA D+R QL + +++ + + S
Sbjct: 922 NVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNA 981
Query: 982 GDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLT 1041
++D IRK++V+GFF + AK + Y+T+ V I P S L +V+YH +VLT
Sbjct: 982 NELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLT 1041
Query: 1042 SREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKK 1077
S+EYM QVT ++ +WL+E APH+Y++ D ++ KK
Sbjct: 1042 SKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1077
>Hs20555648 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 671 bits (1732), Expect = 0.0
Identities = 325/638 (50%), Positives = 458/638 (70%), Gaps = 3/638 (0%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGM-IGCT 500
I+ R LPV+ R++L+ A+ +Q L+I GETGSGKTTQ+ QYL EEG +NKGM I CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLM 560
QP EMG +G EVGY+IRFED TS RT ++Y+TDGM+ RE L +P +
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 511
Query: 561 SRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIE 620
+ YSV+++DEAHERT+ TD+LF L+K A RP+LKV++ SAT+D+ +FS +F + PV
Sbjct: 512 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 571
Query: 621 IPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYER 680
IPG+ FPV++ Y+ P+ DY+E+ + + + IH+ +P GD+LVFLTGQEEI+ CE+L +R
Sbjct: 572 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 631
Query: 681 VKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVID 740
+ L I EL++LP+Y+ LPS++Q+RIF+PTP G+RKV+ ATNIAETS+TI+G+ YV+D
Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 691
Query: 741 PGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNT 800
PGF K +YNPR GME L V+P S+A ANQR GRAGR GKCFRLYT A+++E+ T
Sbjct: 692 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 751
Query: 801 VPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTL 860
VPEIQR +L + +L+LK++GI+DL++F+F+DPPP ++ ALE+L+ L AL+ G LTT
Sbjct: 752 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 811
Query: 861 GKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN-VFYRPKDKQQEADNRKARF 919
G++M++ P++P LSK +LAS CS+E+LT+ AMLS+ N +FYRPKDK ADN + F
Sbjct: 812 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 871
Query: 920 HHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVS 979
P GDHL LLNV+ +W ES YS +C NF+ R ++RA DVR+QL + +++ + + S
Sbjct: 872 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 931
Query: 980 CHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIV 1039
C GD +RK + +G+F + A R +++GY+T+ V I P SSLF ++ ++LYH +V
Sbjct: 932 CQGDYIRVRKAITAGYFYHTA-RLTRSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELV 990
Query: 1040 LTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKK 1077
LT++E+M QV IES WLLE APH+YK + KK
Sbjct: 991 LTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKK 1028
>Hs4503293 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1041
Score = 665 bits (1717), Expect = 0.0
Identities = 323/638 (50%), Positives = 455/638 (70%), Gaps = 3/638 (0%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGM-IGCT 500
I+ R LPV+ R++L+ A+ +Q L+I GETGSGKTTQ+ QYL EEG +NKGM I CT
Sbjct: 392 IQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACT 451
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLM 560
QP EMG +G EVGY+IRFED TS RT ++Y+TDGM+ RE L +P +
Sbjct: 452 QPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 511
Query: 561 SRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIE 620
+ YSV+++DEAHERT+ TD+LF L+K A RP+LKV++ SAT+D+ +FS +F + PV
Sbjct: 512 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 571
Query: 621 IPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYER 680
IPG+ FPV++ Y+ P+ DY+E+ + + + IH+ +P GD+LVFLTGQEEI+ CE+L +
Sbjct: 572 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDP 631
Query: 681 VKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVID 740
+ L I EL++LP+Y+ LPS++Q+RIF+PTP G+RKV+ ATNIAETS TI+G+ YV+D
Sbjct: 632 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLD 691
Query: 741 PGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNT 800
PGF K +YNPR GME L V+P S+A ANQR GRAGR GKCFRLYT A+++E+ T
Sbjct: 692 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 751
Query: 801 VPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTL 860
VPEIQR +L + +L+LK++GI+DL++F+F+DPPP ++ LE+L+ L AL+ G LTT
Sbjct: 752 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLTLEQLYALGALNHLGELTTS 811
Query: 861 GKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN-VFYRPKDKQQEADNRKARF 919
G++M++ P++P LSK +LAS CS+E+LT+ AMLS+ N +FYRPKDK ADN + F
Sbjct: 812 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 871
Query: 920 HHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVS 979
P GDHL LLNV+ +W ES YS +C NF+ R ++RA DVR+QL + +++ + + S
Sbjct: 872 FLPGGDHLVLLNVYTQWAESGYSSQWCCENFVQFRSMRRARDVREQLEGLLERVEVGLSS 931
Query: 980 CHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIV 1039
C GD +RK + +G+F + A R +++GY+T+ V I P SSLF ++ ++LYH +V
Sbjct: 932 CQGDYIRVRKAITAGYFYHTA-RLTRSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELV 990
Query: 1040 LTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKK 1077
LT++E+M QV IES WLLE APH+YK + KK
Sbjct: 991 LTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKK 1028
>CE01027 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1131
Score = 657 bits (1696), Expect = 0.0
Identities = 314/642 (48%), Positives = 457/642 (70%), Gaps = 5/642 (0%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
IK+QRE LPV+ RQ++++ + +N ++IVGETGSGKTTQL QYL E+G + G+IGCTQ
Sbjct: 434 IKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQ 493
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P +EMG ++G++VGY IRFED TS +T IKY+TDG++ RE L D +
Sbjct: 494 PRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLD 553
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFM-NCPVIE 620
+YS I++DEAHER++ TDVLF LL++ +R DLK+I+TSAT+D+DKF+ +F NCP
Sbjct: 554 QYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFT 613
Query: 621 IPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYER 680
IPG+TFPVE+ ++ P DY+++A+ + IH+ GD+L+F+ GQE+I+ CE++ E+
Sbjct: 614 IPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEK 673
Query: 681 VKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVID 740
+ LD P L +LP+YS LPS++Q++IF+ P G RK I ATNIAETS+T+DG+ +VID
Sbjct: 674 LGELDEA-PPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVID 732
Query: 741 PGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNT 800
PGF K+ YNPR+GM+ L + P+SQA ANQR GRAGRTGPG+C+RLYTE FK+E+L +T
Sbjct: 733 PGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKST 792
Query: 801 VPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTL 860
VPEIQR NL + +L+LK++G++DLL F FMD PP+ M++++ +L+ L ALD G LT +
Sbjct: 793 VPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPM 852
Query: 861 GKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFH 920
G++M +FP++P LSK L+ S CSDE+LTIV+MLS+ +F+RPK +++EAD +K +F
Sbjct: 853 GRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQ 912
Query: 921 HPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSC 980
P DHLT LNV+ +WR YS +C N+LH + LK+ +VR QL I + + LP++S
Sbjct: 913 VPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISN 972
Query: 981 HGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEY--DYVLYHSI 1038
+ D +RK + S +F NAA+ + Y + G + P S+LFG + DYV+YH +
Sbjct: 973 GSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHEL 1032
Query: 1039 VLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKKAKI 1080
++T++EYM VTA+++ WL E P FY + + + SRK+ K+
Sbjct: 1033 IMTAKEYMQCVTAVDAIWLAELGPMFYSIKE-SKQSRKELKM 1073
>Hs17999539 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1227
Score = 655 bits (1690), Expect = 0.0
Identities = 323/713 (45%), Positives = 474/713 (66%), Gaps = 11/713 (1%)
Query: 407 VLSNSEFDARQLVATAWERSRMKERVS-YGKRTSLPIKEQRERLPVYRMRQQLIDAVIKN 465
V + + D R A R E S + K+ S I EQR+ LP++ ++Q+L+ + N
Sbjct: 491 VTEDGKVDYRTEQKFADHMKRKSEASSEFAKKKS--ILEQRQYLPIFAVQQELLTIIRDN 548
Query: 466 QFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEE 525
+++VGETGSGKTTQLTQYL E+G ++ GMIGCTQP EEMG N+GEE
Sbjct: 549 SIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEE 608
Query: 526 VGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALL 585
VGY IRFED TS T IKY+TDG++ RE+L + + YS I++DEAHER++ TDVLF LL
Sbjct: 609 VGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLL 668
Query: 586 KKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESAL 645
++ +R DLK+I+TSAT+D++KF+ +F N P+ IPG+TFPV++L+S PQ DY+E+A+
Sbjct: 669 REVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAV 728
Query: 646 DTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQ 705
++ +H++ GD+L+F+ GQE+I+ + + E ++ L+ P L +LP+YS LPS++Q
Sbjct: 729 KQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA-PALAVLPIYSQLPSDLQ 787
Query: 706 SRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQ 765
++IF+ P G RK I ATNIAETS+T+DG+ +VID G+ K+ +NPR+GM+ L + PISQ
Sbjct: 788 AKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQ 847
Query: 766 AQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLL 825
A ANQR GRAGRTGPG+CFRLYT+SA+KNE+L TVPEIQR NL + +L+LK++G+ DLL
Sbjct: 848 ANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLL 907
Query: 826 NFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKC 885
F FMDPPP+ M++++ +L+ L ALD G LT+ G+ M +FP++P LSK L+ S C
Sbjct: 908 QFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGC 967
Query: 886 SDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSF 945
S E+L IV+MLS+ +FYRPK +++E+D + +F P DHLT LNV+ +W+ +NYS +
Sbjct: 968 SSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTIW 1027
Query: 946 CTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQ 1005
C +F+H + +++ +VR QL +I + + + SC D D +RK + + +F AAK +
Sbjct: 1028 CNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKGI 1087
Query: 1006 AGYKTLTDGTQVAISPGSSLFGKEY--DYVLYHSIVLTSREYMMQVTAIESKWLLESAPH 1063
Y + G + P SSLFG Y DY++YH +V+T++EYM VTA++ +WL E P
Sbjct: 1088 GEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPM 1147
Query: 1064 FYKVADPNGS-----SRKKAKIVPLNDRFAQSKDSWRLSSIRANRDKKLGGKR 1111
FY V S R K + + + A +++ R + LG R
Sbjct: 1148 FYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR 1200
>At4g16680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 883
Score = 655 bits (1689), Expect = 0.0
Identities = 336/711 (47%), Positives = 471/711 (65%), Gaps = 14/711 (1%)
Query: 406 KVLSNSEF---DARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAV 462
+V+ EF D V + E K R Y K + +E RE LP++ R++L+ +
Sbjct: 176 QVVDGYEFVFDDLTGFVEESSEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLI 235
Query: 463 IKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNV 522
+NQ LVIVGETGSGKTTQ+ QYL E G + +G IGCTQP +E+G +
Sbjct: 236 EENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKL 295
Query: 523 GEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLF 582
G EVGY+IRFED TS +T IKY+TDGM+ RE L++P + YSVI++DEAHERT++TD+LF
Sbjct: 296 GHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILF 355
Query: 583 ALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIE 642
AL+K A RPDL++II+SATL++ KFS+YF + + IPG+ +PVE L+ P+ DY+E
Sbjct: 356 ALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLE 415
Query: 643 SALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPS 702
+ + T + IH E GD+LVFLTGQEEI+T L R+ L E+II P+YS LP+
Sbjct: 416 TVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPT 475
Query: 703 EIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSP 762
+Q+++FEP PKG+RKV+ ATNIAETS+TIDGV YVIDPG+ KIN+YNPR GME LLV+P
Sbjct: 476 PLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTP 535
Query: 763 ISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGIN 822
IS+A A QR GR+GRTGPGKCFRLY ++ P T+PEIQR NL +L LK++GI
Sbjct: 536 ISKASAAQRAGRSGRTGPGKCFRLYN----IKDLEPTTIPEIQRANLASVVLTLKSLGIQ 591
Query: 823 DLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVT 882
D+ NF+FMDPPP++ ++ ALE L+ L ALDE G +T +G+RM +FP++P LSK ++ S
Sbjct: 592 DVFNFDFMDPPPENALLKALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSEK 651
Query: 883 NKCSDEMLTIVAMLSIQN-VFYRPKDKQQEADNRKARFHHP---YGDHLTLLNVFNRWRE 938
KCS E++TI AMLS+ N VFYRPK++Q AD + F+ GDH+ LL V+N W+E
Sbjct: 652 YKCSKEIITIAAMLSVGNSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKE 711
Query: 939 SNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRN 998
NYS +C F+ + +KRA D+R QL + K+ + + S D+D I+K +++GFF +
Sbjct: 712 ENYSTQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAGFFPH 771
Query: 999 AAKRESQAGYKTLTDGTQVAISPGSSLFG-KEYDYVLYHSIVLTSREYMMQVTAIESKWL 1057
+AK + Y+ + + V + P S LFG +++YH +VLT++EYM T ++ +WL
Sbjct: 772 SAKLQKNGSYRRVKEPQTVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWL 831
Query: 1058 LESAPHFYKVADPNGSSRKKA--KIVPLNDRFAQSKDSWRLSSIRANRDKK 1106
+E APH+YK+ D + KK +I + + R S + N+ K
Sbjct: 832 IEIAPHYYKLKDIEDTRPKKTQRRIEEASTSKVDTNKKTRTSKVDTNKKSK 882
>CE15592 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 1008
Score = 647 bits (1670), Expect = 0.0
Identities = 327/645 (50%), Positives = 458/645 (70%), Gaps = 4/645 (0%)
Query: 436 KRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG 495
++ + I+E R+ LPVY R I+AV ++Q L+I GETGSGKTTQL QYL E G G
Sbjct: 351 EKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGG 410
Query: 496 M-IGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREA 554
IGCTQP +E+GC +G +VGY+IRFED TS +T +KY+TDGM+ RE
Sbjct: 411 KRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREF 470
Query: 555 LLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFM 614
L +P ++ YSV+++DEAHERT+ TD+LF L+K A R DLK++I+SATLD++KFS +F
Sbjct: 471 LNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFD 530
Query: 615 NCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEP-QGDVLVFLTGQEEIDTC 673
+ P+ IPG+ FPV++ Y+ P+ DY+++A+ T M IH+ +P GD+LVFLTGQEEI+T
Sbjct: 531 DAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETV 590
Query: 674 CEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITID 733
E L ER KAL I ELI LPVY+ LPS++Q++IFEPTPK +RKV+ ATNIAETS+TID
Sbjct: 591 QEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTID 650
Query: 734 GVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFK 793
G+ YVIDPGFSK N+++ R G+E L V IS+A ANQR GRAGRTGPGKCFRLYT A+K
Sbjct: 651 GINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYK 710
Query: 794 NEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDE 853
+E+ +PEIQR NL + +LMLK++GI+DL++F+F+DPPP+ +V ALE+L+ L AL+
Sbjct: 711 HELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNH 770
Query: 854 EGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQ-NVFYRPKDKQQEA 912
G LT LG+RM++FP +P +SK ++AS +CS+E++TI AMLS VFYRPK + A
Sbjct: 771 RGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHA 830
Query: 913 DNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKK 972
D+ + F P GDH+TL+NV+N+W+ES++S+ +C N++ R +KRA DVR QL + ++
Sbjct: 831 DSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLER 890
Query: 973 MNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDY 1032
+ + S D IRK + +G+F N +K ++ YKT+ P S LF + +
Sbjct: 891 VEIETKS-STDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRW 949
Query: 1033 VLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKK 1077
V+Y +V TS+E+M +++ IES WLLE APH+YK + ++ KK
Sbjct: 950 VVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKK 994
>At5g13010 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1226
Score = 627 bits (1618), Expect = e-179
Identities = 314/693 (45%), Positives = 465/693 (66%), Gaps = 12/693 (1%)
Query: 393 LNKSKQLADPSSSKVLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVY 452
+ KS + D ++ V + E D + A + + E VS S + EQR+ LP++
Sbjct: 479 IEKSAEQIDADTAVVGDDGEVDFKGEAKFA-QHMKKGEAVSEFAM-SKTMAEQRQYLPIF 536
Query: 453 RMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXX 512
+R +L+ + +NQ +V+VGETGSGKTTQLTQ +G + G++GCTQP
Sbjct: 537 SVRDELLQVIRENQVIVVVGETGSGKTTQLTQ----DGYTINGIVGCTQPRRVAAMSVAK 592
Query: 513 XXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAH 572
EEM +G+++GY IRFED T T IKY+TDG++ RE L D + +Y V+++DEAH
Sbjct: 593 RVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAH 652
Query: 573 ERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLY 632
ER++ TDVLF +LKK +R D K+I+TSATL++ KFS +F + P+ IPG+TFPV +LY
Sbjct: 653 ERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFPVNILY 712
Query: 633 SSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGT----I 688
S P DY+E+A+ M IHI P GD+L+F+TGQ+EI+ C L ER++ L + I
Sbjct: 713 SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREI 772
Query: 689 PELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINT 748
L+ILP+YS LP+++Q++IF+ G+RK I ATNIAETS+T+DG+YYVID G+ K+
Sbjct: 773 TNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKV 832
Query: 749 YNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQN 808
+NPR+GM+ L V PIS+A ++QR GRAGRTGPG C+RLYTESA+ NEMLP+ VPEIQR N
Sbjct: 833 FNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTN 892
Query: 809 LEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFP 868
L + +L+LK++ I++LL+F+FMDPPP+ +++++ +L+ L AL+ G LT LG +M +FP
Sbjct: 893 LGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFP 952
Query: 869 MEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLT 928
++P L+K LL C DE+LTIV+MLS+ +VF+RPK++ +E+D + +F P DHLT
Sbjct: 953 LDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLT 1012
Query: 929 LLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIR 988
LLNV+ +W+E +Y +C ++L + L++A +VR QL +I K++ + + SC D D +R
Sbjct: 1013 LLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGPDWDIVR 1072
Query: 989 KTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEY--DYVLYHSIVLTSREYM 1046
K + S +F N+A+ + Y G + P S+L+G Y DYV+YH ++LT++EYM
Sbjct: 1073 KAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYM 1132
Query: 1047 MQVTAIESKWLLESAPHFYKVADPNGSSRKKAK 1079
T++E WL E P F+ V D + S + K
Sbjct: 1133 QCATSVEPHWLAELGPMFFSVKDSDTSMLEHKK 1165
>At2g47250 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 616 bits (1588), Expect = e-176
Identities = 321/701 (45%), Positives = 462/701 (65%), Gaps = 29/701 (4%)
Query: 399 LADPSSSKVLSNSEFDARQLVATAWERSRMKERVSYGKRTS---LPIKEQRERLPVYRMR 455
+ DPS S N++ + L A A S + + + GK S I E+R LPV+ +
Sbjct: 15 MEDPSLSS--KNTKSNGLGLAAAAGGGSNLINKWN-GKAYSQRYFEILEKRRDLPVWLQK 71
Query: 456 QQLIDAVIKNQFLVIVGETGSGKTTQLTQYL------DEEGLSNKGMIGCTQPXXXXXXX 509
++ + NQ L++VGETGSGKTTQ+ Q++ D K ++GCTQP
Sbjct: 72 DDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMS 131
Query: 510 XXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLD 569
+EM ++GEEVGY+IRFED TSSRT +KYLTDGM+ REA+ DPL+ RY VI+LD
Sbjct: 132 VSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILD 191
Query: 570 EAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVE 629
EAHERT+ATDVLF LLK+ RPDLK+++ SATL+++KF +YF P++++PG+ PVE
Sbjct: 192 EAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVE 251
Query: 630 VLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIP 689
+ Y+ +P+ DY+E+A+ T + IH+ EP GD+LVFLTG+EEI+ C + + V L +
Sbjct: 252 IFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVG 311
Query: 690 ELIILPVYSALPSEIQSRIFEPTP-------KGSRKVIFATNIAETSITIDGVYYVIDPG 742
+ ++P+YS LP +Q +IF+P P RK++ +TNIAETS+TIDG+ YVIDPG
Sbjct: 312 PVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPG 371
Query: 743 FSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVP 802
F+K YNPR+ +E LLVSPIS+A A+QR GRAGRT PGKCFRLYTE +F N++ P T P
Sbjct: 372 FAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYP 431
Query: 803 EIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGK 862
EI R NL +T+L LK +GI+DL++F+FMDPP ++ ALE L L ALD+EG LT G+
Sbjct: 432 EILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGE 491
Query: 863 RMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHP 922
MS+FP++P +SK L+ S CS+E+L++ AMLS+ N F RP++ Q+ AD KARF H
Sbjct: 492 IMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHI 551
Query: 923 YGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHG 982
GDHLTLLNV++ ++++N ++C NF++ R +K A +VRQQL I + NL + C
Sbjct: 552 DGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKM--CST 609
Query: 983 DVDC------IRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYH 1036
D + IRK +++G+F A E Y T+ D V + P + L K ++V+Y+
Sbjct: 610 DFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKP-EWVIYN 668
Query: 1037 SIVLTSREYMMQVTAIESKWLLESAPHFYKVAD-PNGSSRK 1076
VLT+R ++ VT I +WL++ A H+Y +++ PN +++
Sbjct: 669 EYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKR 709
>At3g62310 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 726
Score = 608 bits (1567), Expect = e-173
Identities = 306/655 (46%), Positives = 442/655 (66%), Gaps = 23/655 (3%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYL------DEEGLSNKG 495
I E+R LPV+ +++ + + NQ L++VGETGSGKTTQ+ Q++ + K
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 496 MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREAL 555
++GCTQP EEM +GEEVGY+IRFED +S RT +KYLTDGM+ REA+
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173
Query: 556 LDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMN 615
DPL+ RY VI+LDEAHERT+ATDVLF LLK+ RPDLK+++ SATL+++KF YF
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233
Query: 616 CPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCE 675
P++++PG+ PVE+ Y+ +P+ DY+E+A+ T + IH+ EP GD+LVFLTG+EEI+ C
Sbjct: 234 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 293
Query: 676 ILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKG-------SRKVIFATNIAET 728
+ + V L + + ++P+YS LP +Q +IF+P P+ RK++ +TNIAET
Sbjct: 294 KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 353
Query: 729 SITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYT 788
S+TIDG+ YVIDPGF+K YNPR+ +E LLVSPIS+A A+QR GRAGRT PGKCFRLYT
Sbjct: 354 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 413
Query: 789 ESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNL 848
E +F N++ P T PEI R NL +T+L LK +GI+DL++F+FMDPP ++ ALE L L
Sbjct: 414 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 473
Query: 849 QALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDK 908
ALD++G LT G+ MS+FP++P ++K L+ S CS+E+L++ AMLS+ N F RP++
Sbjct: 474 GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 533
Query: 909 QQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFN 968
Q+ AD KARF H GDHLTLLNV++ ++++N ++C NF++ R +K A +VRQQL
Sbjct: 534 QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593
Query: 969 IFKKMNLPIVSCHGDVDC------IRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPG 1022
I + NL + C D + IRK +++G+F A E Y T+ D V + P
Sbjct: 594 IMSRFNLKM--CSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPS 651
Query: 1023 SSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVAD-PNGSSRK 1076
+ L K ++V+Y+ VLTSR ++ VT I +WL++ A H+Y +++ PN +++
Sbjct: 652 NCLDHKP-EWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKR 705
>SPBC16H5.10c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 735
Score = 596 bits (1536), Expect = e-170
Identities = 308/668 (46%), Positives = 437/668 (65%), Gaps = 15/668 (2%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYL--DEEGLSNKGMIGC 499
I E R LPVY+ R++ + +NQ +V VGETGSGKTTQ+ Q++ DE I C
Sbjct: 68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIAC 127
Query: 500 TQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPL 559
TQP +EM ++GEEVGY IRFED + T +KY+TDGM+ REA+ D +
Sbjct: 128 TQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHM 187
Query: 560 MSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVI 619
+SRYS I+LDEAHERT+ATD+L L+K+ A +RPDLK+I+ SATLD+ KF KYF + P++
Sbjct: 188 LSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLL 247
Query: 620 EIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYE 679
+PG+T+PVE+ Y+ +P+ DY+E+AL T + IH+ E GD+LVFLTG+EEI+ C +
Sbjct: 248 AVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITL 307
Query: 680 RVKAL--DGTIPELIILPVYSALPSEIQSRIFEPTPKGS-----RKVIFATNIAETSITI 732
L +G L + P+Y +LP Q RIFEPTP+ + RKV+ +TNIAETS+TI
Sbjct: 308 EADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTI 367
Query: 733 DGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAF 792
DG+ YV+DPGFSK YNPR+ +E LLVSPIS+A A QR GRAGRT PGKCFRLYTE AF
Sbjct: 368 DGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 427
Query: 793 KNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALD 852
+ E++ T PEI R NL T+L LK +GI+DL++F++MDPP M+ ALEEL L LD
Sbjct: 428 RKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLD 487
Query: 853 EEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEA 912
+ G LT LG++ S+FP++P L+ L+ S CS+E+L++ A+LS+ NVF RP ++ A
Sbjct: 488 DNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLA 547
Query: 913 DNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKK 972
D + +F HP GDHLTLLNV++ ++ + +C +FL R L A +VR+QL ++
Sbjct: 548 DEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMER 607
Query: 973 MNLPIVSCHGD----VDCIRKTLVSGFFRNAAKRESQA-GYKTLTDGTQVAISPGSSLFG 1027
+ ++S D IR+ LVSGFF AK+ + Y T+ D V++ P L
Sbjct: 608 QEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGL-S 666
Query: 1028 KEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKKAKIVPLNDRF 1087
++V+Y+ VLT++ ++ VTAI +WL+E AP++Y + D + + K+ + +
Sbjct: 667 VTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVKSALQKVYQMA 726
Query: 1088 AQSKDSWR 1095
A+SK + R
Sbjct: 727 ARSKKNAR 734
>7304234 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 729
Score = 586 bits (1510), Expect = e-167
Identities = 308/635 (48%), Positives = 425/635 (66%), Gaps = 15/635 (2%)
Query: 444 EQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSN--KGMIGCTQ 501
++R LPV+ + + + +Q +V+VGETGSGKTTQ+ Q+ + +S KG + CTQ
Sbjct: 67 KKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKG-VSCTQ 125
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P EEM +GEEVGY+IRFED ++++T +KY+TDGM+ REA+ DP++
Sbjct: 126 PRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLD 185
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEI 621
+Y VILLDEAHERT+ATD+L +LK+ QR DLK+++ SATLD+ KF +YF N P++++
Sbjct: 186 QYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNAPLMKV 245
Query: 622 PGKTFPVEVLYSSKPQMDYIESALDTTMDIHI-NEPQGDVLVFLTGQEEIDTCCEILYER 680
PG+T PVE+ Y+ +P+ DY+E+A+ T + IH+ E +GD+L+FLTGQEEI+ C+ +
Sbjct: 246 PGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKRE 305
Query: 681 VKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGS------RKVIFATNIAETSITIDG 734
+ L I EL +P+YS LP +Q RIFEP P + RKV+ +TNIAETS+TIDG
Sbjct: 306 IDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDG 365
Query: 735 VYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKN 794
V +VIDPGF+K YNPR+ +E LLVSPIS+A A QR GRAGRT PGKCFRLYTE AFKN
Sbjct: 366 VVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKN 425
Query: 795 EMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEE 854
EM NT PEI R NL +L LK +GI+DL++F+FMDPP ++ ALE L L ALD++
Sbjct: 426 EMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDD 485
Query: 855 GFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADN 914
G LT LG MS+FP++P L+K L+AS + CS+E+L+I AMLS+ F RP + ++ AD
Sbjct: 486 GNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKKAADE 545
Query: 915 RKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMN 974
K RF H GDHLTLLNV++ +++S+ ++C NF++ R LK A +VRQQL I + N
Sbjct: 546 AKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRFN 605
Query: 975 LPIVSCHGDVD----CIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEY 1030
L S IRK LV GFF A E Y T+ D V + P + L K
Sbjct: 606 LRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHPSTCLDHKP- 664
Query: 1031 DYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFY 1065
D+V+Y+ VLT++ Y+ VT ++ +WL AP +Y
Sbjct: 665 DWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYY 699
>YGL120c [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 767
Score = 582 bits (1500), Expect = e-165
Identities = 313/680 (46%), Positives = 443/680 (65%), Gaps = 28/680 (4%)
Query: 446 RERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYL--DEEGLSNKGMIGCTQPX 503
R LPV+ R + + NQ +V VGETGSGKTTQ+ Q++ DE + CTQP
Sbjct: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149
Query: 504 XXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRY 563
EEM +GEEVGY+IRFE++TS++T +KY+TDGM+ REA+ D +SRY
Sbjct: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209
Query: 564 SVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPG 623
S I+LDEAHERT+ATD+L LLK+ +RPDLK+II SATLD++KF +YF + P++ +PG
Sbjct: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269
Query: 624 KTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILY---ER 680
+T+PVE+ Y+ + Q DY++SA+ T + IH E GD+L+FLTG++EI+ + ++
Sbjct: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329
Query: 681 VKALDGTIPELIILPVYSALPSEIQSRIFEPTPKG-----SRKVIFATNIAETSITIDGV 735
+ +G P L + P+Y +LP Q RIFEP P+ RKV+ +TNIAETS+TIDG+
Sbjct: 330 LVREEGCGP-LSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGI 388
Query: 736 YYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNE 795
YV+DPGFSK YNPR+ +E LLVSPIS+A A QR GRAGRT PGKCFRLYTE AF+ E
Sbjct: 389 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKE 448
Query: 796 MLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEG 855
++ + PEI R NL T+L LK +GI+DL++F+FMDPP M+ ALEEL L LD+EG
Sbjct: 449 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEG 508
Query: 856 FLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNR 915
LT LG+ SQFP++P L+ L+ S +CS E+LTIVAMLS+ NVF RP ++ AD+
Sbjct: 509 NLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDA 568
Query: 916 KARFHHPYGDHLTLLNVFNRWRESNYSK----SFCTTNFLHERHLKRALDVRQQLFNIFK 971
K F HP GDH+TLLNV++ ++ + +C ++L+ R L A ++R QL +
Sbjct: 569 KNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMN 628
Query: 972 KMNLPIVSCHGD----VDCIRKTLVSGFFRNAAKRESQA-GYKTLTDGTQVAISPGSSLF 1026
+ NL + + + D IRK L SGFF AK+ S A GY T+ D V I P S++
Sbjct: 629 RYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHP-STVL 687
Query: 1027 GKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKKAKIVPLNDR 1086
G + ++V+Y+ VLTS+ Y+ VT++ +WL+E AP +Y + S+ +K + +R
Sbjct: 688 GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDL-----SNFQKGDVKLSLER 742
Query: 1087 FAQSKDSWRLSSIRANRDKK 1106
+ D RL+ ++ ++KK
Sbjct: 743 IKEKVD--RLNELKQGKNKK 760
>YKR086w [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 1071
Score = 579 bits (1492), Expect = e-165
Identities = 301/643 (46%), Positives = 427/643 (65%), Gaps = 17/643 (2%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG--MIGC 499
IK +E+LPV+R R QL+ + +NQ +VI+GETGSGKTTQL QYL EEG +N I
Sbjct: 343 IKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVV 402
Query: 500 TQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSR-TRIKYLTDGMMQREALLDP 558
TQP EM +G+EVGY+IRFED T S T++K++TDG++ RE LLD
Sbjct: 403 TQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDD 462
Query: 559 LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPV 618
+ +YS +++DEAHER++ TD+L K +R DLK+IITSAT+++ KFS +F N P
Sbjct: 463 TLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQ 522
Query: 619 IEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEP--QGDVLVFLTGQEEIDTCCEI 676
IPG+TFPV+ +Y+S P DY+E+A+ + IH+ GD+L+F+TGQE+I+T +
Sbjct: 523 FTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDT 582
Query: 677 LYERVKALD----GT-----IPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAE 727
L E+ + GT I ++ ILP+YSALP+++Q +IF+ RK+I ATNIAE
Sbjct: 583 LQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAE 642
Query: 728 TSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLY 787
TS+TI G+ YVID G+SK+ YNP++G++ L+++PIS+A A+QR GRAGRT PG +RLY
Sbjct: 643 TSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLY 702
Query: 788 TESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLN-FEFMDPPPKSFMVSALEELF 846
TE FK +M T+PEIQR NL +T+L+LK++ + D L+ F F+D PP +S+L EL+
Sbjct: 703 TEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELW 762
Query: 847 NLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPK 906
+ A+D G LT LG +M++FP++P LSK LL +V N CSDEMLTIV+MLS+ VFYRPK
Sbjct: 763 FIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPK 822
Query: 907 DKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQL 966
++Q+EAD + +F DHLTLLNVF +WR +N+S +C +F+ + L RA D+R QL
Sbjct: 823 ERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQL 882
Query: 967 FNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSL- 1025
I K +P++S D D I+K + SGF AAK Y L G V + P S+L
Sbjct: 883 LTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALH 942
Query: 1026 -FGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKV 1067
G YV+YH +++TS+EY+ VT+++ WL+E Y +
Sbjct: 943 GLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDI 985
>Hs4557517 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 813
Score = 571 bits (1472), Expect = e-162
Identities = 303/642 (47%), Positives = 424/642 (65%), Gaps = 15/642 (2%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGM---IG 498
I ++R +LPV+ + + D + ++Q V+VGETGSGKTTQ+ E S G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILGRHQSFVLVGETGSGKTTQIPHRCVEYMRSLPGPKRGVA 189
Query: 499 CTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDP 558
CTQP +EM +G+EVGY+IRFED +S++T Y+TDGM+ REA+ DP
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTFFMYMTDGMLLREAMNDP 249
Query: 559 LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPV 618
L+ RY VI+LDEAHERT+ATD+L +LK+ QR DLKVI+ SATLD+ KF YF NCP+
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 619 IEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHI-NEPQGDVLVFLTGQEEIDTCCEIL 677
+ IPG+T PVE+ Y+ +P+ DY+E+A+ T + IH+ E +GD+L+FLTGQEEID C+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 678 YERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGS------RKVIFATNIAETSIT 731
V L + ++ I+P+YS LP + Q RIFEP P RKV+ +TNIAETS+T
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 732 IDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESA 791
IDGV +VIDPGF+K YNPR+ +E LLV+ IS+A A QR GRAGRT PGKCFRLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 792 FKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQAL 851
+K EM NT PEI R NL +L LK +GI+DL++F+FMDPP ++ ALE L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 852 DEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQE 911
+++G LT LG M++FP++P L+K ++AS CS+E+L+I AMLS+ F RP + ++
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 912 ADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFK 971
AD K RF H GDHLTLLNV++ +++++ S +C NF++ R L A +VRQQL I
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 972 KMNLPIVS----CHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFG 1027
+ NLP S IRK LV+G+F A E Y T+ D V + P S++
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHP-STVLD 728
Query: 1028 KEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVAD 1069
+ ++VLY+ VLT++ Y+ T I+ +WL++ AP +Y +++
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSN 770
>CE01334 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 569 bits (1466), Expect = e-161
Identities = 298/660 (45%), Positives = 424/660 (64%), Gaps = 21/660 (3%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDE--------EGLSN 493
I E+R +LPV+ +++ ++ + NQ + +VGETGSGKTTQ+ Q+ E +
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 494 KGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQRE 553
++ CTQP EEM +G+EVGY+IRFED S RT +KY TDGM+ RE
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 554 ALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYF 613
A+ PL+ +Y V++LDEAHERT+ATD+L L+K+ R D+KV+I SATLD+ KF +YF
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF 248
Query: 614 MNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIH-INEPQGDVLVFLTGQEEIDT 672
+CP++ +PG+TFPVE+ ++ + DY+E+A+ T + IH + E +GD+L+FLTGQEEI+
Sbjct: 249 EDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEE 308
Query: 673 CCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKG------SRKVIFATNIA 726
C+ + ++AL L +P+YS LP Q RIFEP P SRK + +TNIA
Sbjct: 309 ACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIA 368
Query: 727 ETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRL 786
ETS+TIDGV +VIDPGFSK YNPR+ +E LLV PIS+A A QR GRAGRT PGKCFRL
Sbjct: 369 ETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRL 428
Query: 787 YTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELF 846
YTE+A+ +EM T PEI R NL +L LK +G DL++F+FMDPP ++ ALE L
Sbjct: 429 YTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLN 488
Query: 847 NLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPK 906
LQA++++G LT LG M++FP++P L+K L+ S CS+E+L+I AMLS+ + RP
Sbjct: 489 YLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPN 548
Query: 907 DKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQL 966
+ + EAD KARF H GDHLTLLNV++ ++++ +C NF++ R +K A VR QL
Sbjct: 549 EMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQL 608
Query: 967 FNIFKKMNLPIVS----CHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPG 1022
+ K NL VS IRK LV+GFF A E Y T+ D V + P
Sbjct: 609 SRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP- 667
Query: 1023 SSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVAD-PNGSSRKKAKIV 1081
S++ + ++ LY+ VLT++ ++ VT + +WLL+ AP +Y + + P+G +++K V
Sbjct: 668 STVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTV 727
>Hs20544129 [A] KOG0922 DEAH-box RNA helicase
Length = 703
Score = 568 bits (1463), Expect = e-161
Identities = 310/682 (45%), Positives = 433/682 (63%), Gaps = 21/682 (3%)
Query: 419 VATAWERSRMKER----VSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGET 474
V+ + ER + E V Y +L I++QR++LPV+++R ++ + Q +VIVGET
Sbjct: 20 VSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGET 79
Query: 475 GSGKTTQLTQYLDEEGLSNKG-MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFE 533
G GK+TQ+ QYL E G + +G ++G TQP EE G +G EVGY IRF+
Sbjct: 80 GCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFD 139
Query: 534 DETSS-RTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQR 592
D T TRIK+LTDGM+ RE ++DPL+++YSVI+LDEAHERT+ TD+ LLKK +R
Sbjct: 140 DCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
Query: 593 PDLKVIITSATLDSDKFSKYFMN----------CPVIEIPGKTFPVEVLYSSKPQMDYIE 642
DL++I+ SATLD+DKF +F C ++ + G+TFPV++ Y P DYI+
Sbjct: 200 GDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIK 259
Query: 643 SALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKAL--DGTIPELIILPVYSAL 700
S ++T + IH E GDVL FLTGQEE++T +L E+ +AL G L +LP+Y+ L
Sbjct: 260 STVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGL 319
Query: 701 PSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLV 760
PS Q ++FE + RKVI ATN+AETSITI G+ YVID GF K+ YNPR +E L+V
Sbjct: 320 PSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVV 379
Query: 761 SPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMG 820
P+SQA ANQR GR GR+ GKC+RLYTE AF +++ +TVPE+QR NL IL LKA+G
Sbjct: 380 VPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALG 438
Query: 821 INDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTT-LGKRMSQFPMEPGLSKTLLA 879
I+++L F FM PPP MV ALE L+ L LD++ LT LG R+++FP+ P +K LL
Sbjct: 439 IDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLE 498
Query: 880 SVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRES 939
S CS E+L+I AM+ IQN+F P +++ A +F GDHLT+LN++ + +
Sbjct: 499 SGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKH 558
Query: 940 NYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNA 999
N +C +FL+ + L RA VR+QL + K +P S GD D + + +VSGFF NA
Sbjct: 559 NKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANA 618
Query: 1000 AKRESQAGYKTLTDGTQVAISPGSSLFG-KEYDYVLYHSIVLTSREYMMQVTAIESKWLL 1058
A+ S Y+T+ D ++ I P S L+ K +V+Y+ ++ TS+ YM VTAIES WLL
Sbjct: 619 ARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLL 678
Query: 1059 ESAPHFYKVADPNGSSRKKAKI 1080
E APHFY+ K+AK+
Sbjct: 679 ELAPHFYQQGTHLSLKAKRAKV 700
>SPAC2G11.11c [A] KOG0922 DEAH-box RNA helicase
Length = 719
Score = 520 bits (1340), Expect = e-147
Identities = 263/658 (39%), Positives = 413/658 (61%), Gaps = 6/658 (0%)
Query: 410 NSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLV 469
+++F A ++V + + S KR I EQR+ LP++ L + N+ +V
Sbjct: 59 DTDFGANEVVGSDNSSPEKRSENSPSKRKD--ILEQRKNLPIWEAHDTLCQQIQDNRVIV 116
Query: 470 IVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYT 529
+VGETGSGK+TQ+ Q+L+E + +G + TQP E GC +GE+VGY+
Sbjct: 117 VVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYS 176
Query: 530 IRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAA 589
IRF+D TS +TRIKYLTDGM+ RE + DP++S+Y ++LDEAHERT+ TD+L +KK
Sbjct: 177 IRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKII 236
Query: 590 LQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTM 649
+RP L+VII SATL++++FS++F + I G+ +PV++ Y+ P+ DY+++ L T
Sbjct: 237 KKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIF 296
Query: 650 DIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIF 709
+H P GD+LVFLTGQ+EI+ ++ K L +P++ P++++LP E Q ++F
Sbjct: 297 QLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVF 356
Query: 710 EPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQAN 769
P RKV+ +TNIAETS+TI G+ YVID G +KI +N ++G+E L V PISQ+ A
Sbjct: 357 LPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAM 416
Query: 770 QRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEF 829
QR GRAGR G+C+R+YTE+ F +++ T+PEI+R +L +L LKA G ND++NF +
Sbjct: 417 QRSGRAGREAAGQCYRIYTEADF-DKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHY 475
Query: 830 MDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEM 889
MDPP K ++ ALE L+++ ALD+ G + LG +MS P+ P L++ +LA+ + C E+
Sbjct: 476 MDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEV 535
Query: 890 LTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYS--KSFCT 947
+ +V+ LS ++F P++K+ EA + +F H GD LT LN ++ ES++ K +C+
Sbjct: 536 IDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCS 595
Query: 948 TNFLHERHLKRALDVRQQLFNIFKKMNLPIVSC-HGDVDCIRKTLVSGFFRNAAKRESQA 1006
NF++ R LK LD+R+QL K + S + + + + +SG+ N A
Sbjct: 596 QNFINRRALKTILDIRKQLREHCLKDGWELNSSPEVNSENLLLSFLSGYITNTALLHPDG 655
Query: 1007 GYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHF 1064
Y+T+ ++I P SSLFGK+ + ++YH +V T++ Y+ V++I S WL APH+
Sbjct: 656 SYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>At1g26370 [A] KOG0922 DEAH-box RNA helicase
Length = 710
Score = 509 bits (1312), Expect = e-144
Identities = 286/685 (41%), Positives = 410/685 (59%), Gaps = 62/685 (9%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG-MIGCT 500
I E R LP+ + ++L++ V KN L+IVGETGSGKTTQL Q+L G +G MIG T
Sbjct: 31 IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGIT 90
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLM 560
QP EE +G++VGY+IRF+D TS TR+KY+TDG++ REALLDP +
Sbjct: 91 QPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHL 150
Query: 561 SRYSVILLDEAHERTVATDVLFALLKKAALQRPD-------------------------- 594
SRYSVI++DEAH+R+V TDVL ALLKK R
Sbjct: 151 SRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQ 210
Query: 595 ---------------LKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMD 639
LK+II SA+LD+ FS+YF + + G+ FPV++LY+ P+ D
Sbjct: 211 QNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESD 270
Query: 640 YIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSA 699
Y+++ L T E GD+LVFLTGQ+EI++ ++ ER++ + +L+ L ++SA
Sbjct: 271 YVDATLVTIFQ----EKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSA 326
Query: 700 LPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLL 759
LPSE Q ++F P P G RKVI ATNIAETSITI G+ YVIDPGF K +Y+P GME L
Sbjct: 327 LPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLD 386
Query: 760 VSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAM 819
V P S+AQ QR GRAGR GPGK FRLY E F+ ++ +T PEI+R NL + IL LKA+
Sbjct: 387 VVPASKAQTLQRSGRAGREGPGKSFRLYPEREFE-KLEDSTKPEIKRCNLSNIILQLKAL 445
Query: 820 GINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFL-TTLGKRMSQFPMEPGLSKTLL 878
GI+D++ F+F+D P + ++ AL EL +L AL ++G L +G +MS+ P+EP SK L+
Sbjct: 446 GIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALI 505
Query: 879 ASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRE 938
+ C +EML VA+LS++++FY P++K++EA K F GDHLT L+V+ E
Sbjct: 506 LANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDE 565
Query: 939 --------------SNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDV 984
K +C N+++ R LK A D+ +Q+ +++ + SC D+
Sbjct: 566 FLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDM 625
Query: 985 DCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSRE 1044
R+ L + FF AA+R+ Y+ L G V I P S LF + + V+++ ++ TS++
Sbjct: 626 LAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKK 685
Query: 1045 YMMQVTAIESKWLLESAPHFYKVAD 1069
Y+ +T I+S WL E APH ++ A+
Sbjct: 686 YIKNLTIIDSLWLSELAPHHFQTAE 710
>Hs20336302 [A] KOG0922 DEAH-box RNA helicase
Length = 707
Score = 504 bits (1297), Expect = e-142
Identities = 266/634 (41%), Positives = 397/634 (61%), Gaps = 10/634 (1%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
++ QR LP+++ R QL+ + V++GETGSGKTTQ+ QYL E G+S +G+I TQ
Sbjct: 67 VELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQ 126
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P +E +G+ VGYT+RF+D TS TRIK+LTDGM+ REA+ D L+
Sbjct: 127 PRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLR 186
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQRPDL-----KVIITSATLDSDKFSKYFMNC 616
+YS ++LDEAHERT+ TDVLF ++K A +R +L KVI+ SAT+D D FS+YF
Sbjct: 187 KYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGA 246
Query: 617 PVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQG-DVLVFLTGQEEIDTCCE 675
PV+ + G+ P++V Y+ +PQ DY+ +AL + IH P D+LVFLTGQEEI+ +
Sbjct: 247 PVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSK 306
Query: 676 ILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGV 735
+ K L P +++LP+Y++LP Q R+F+ PKG RKVI +TNIAETSITI G+
Sbjct: 307 TCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGI 366
Query: 736 YYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNE 795
YV+D G K YNP G+E L V +S+ QA QR GRAGR G C+RLYTE F+ +
Sbjct: 367 KYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-K 425
Query: 796 MLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQAL---D 852
TVPEIQR NL +L L AM + ++L F+FM P + +A+ +L L AL D
Sbjct: 426 FDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKD 485
Query: 853 EEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEA 912
++ LT +G++M+ FP+EP +KT+L S C++E+LTIV++LS+ +V + P +++E
Sbjct: 486 DQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEV 545
Query: 913 DNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKK 972
+ +F GDH+TLLN++ ++ +K +C NF++ +++ +VR QL +I K
Sbjct: 546 QGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLK 605
Query: 973 MNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDY 1032
M++PI S GDV+ +R+ L F + A+ + Y T VAI P S LF +
Sbjct: 606 MSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPAC 665
Query: 1033 VLYHSIVLTSREYMMQVTAIESKWLLESAPHFYK 1066
V+Y ++ T++ YM + I+++WL E+AP +++
Sbjct: 666 VVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 699
>7295673 [A] KOG0922 DEAH-box RNA helicase
Length = 671
Score = 499 bits (1286), Expect = e-141
Identities = 267/638 (41%), Positives = 400/638 (61%), Gaps = 14/638 (2%)
Query: 439 SLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIG 498
++ + EQRERLP+ + R Q++ + K+Q +++VGETGSGK+TQ+ QYL E G KG+IG
Sbjct: 37 NMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIG 96
Query: 499 CTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDP 558
T+P +E G VG+ VGY +RF + SS T+IK++T+G++ RE L DP
Sbjct: 97 ITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADP 156
Query: 559 LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFM---- 614
L+++Y VI++DEAHER + TD++ LLKK +R LK+II+SAT+D+ FS++F
Sbjct: 157 LLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFSEFFSWPGS 216
Query: 615 --NCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDT 672
+ I G+ PV Y ++P DY++ ++T +H EP GD+L FLTGQEE+
Sbjct: 217 GEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLE 276
Query: 673 CCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITI 732
++L E + + + L +LP+Y ++ S Q +F PKG+RKV+ ATNIAETSITI
Sbjct: 277 ALDLLREYIASSEQ--ENLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITI 334
Query: 733 DGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAF 792
G+ YVID G+ K+ YNP+ + L++ P+S+A A QR GRAGR PGK +RLYT+S +
Sbjct: 335 PGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDY 394
Query: 793 KNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALD 852
+ + P PE++R L IL LKA+GI ++L F+F PPP ++SALE LF L A+D
Sbjct: 395 E-ALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAID 453
Query: 853 EEGFLT-TLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQE 911
E+G LT +G +++ P LSK L S CS+E++TI+A+L +Q++F RP +
Sbjct: 454 EQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQ 513
Query: 912 ADNRKA--RFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNI 969
R A +F GD +T+LN + + E +K FC FL R+LKRA +R+QL +
Sbjct: 514 QSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHSLREQLITV 573
Query: 970 F-KKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFG- 1027
KK +PI SC GDV+ + K + +GFF A Y+ ++ GT++AI P S+L+
Sbjct: 574 ARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIHPNSTLYTL 633
Query: 1028 KEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFY 1065
+ YV+Y ++ T++ +M VT I+ +WL E APH+Y
Sbjct: 634 PQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYY 671
>YNR011c [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 876
Score = 497 bits (1280), Expect = e-140
Identities = 276/671 (41%), Positives = 416/671 (61%), Gaps = 36/671 (5%)
Query: 426 SRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQY 485
+R+ + + ++ L I+E R+ LPV++ + +L+ + KNQ L+I+GETGSGKTTQL QY
Sbjct: 200 ARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQY 259
Query: 486 LDEEGLSNKG--MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETS-SRTRI 542
L E+G +++G I TQP +EM +G+EVGY IRFED+T+ ++T +
Sbjct: 260 LVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVL 319
Query: 543 KYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSA 602
KY+TDGM+ RE L D +S+YS I++DEAHERT+ATD+L LLK QRP LK++I+SA
Sbjct: 320 KYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSA 379
Query: 603 TLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEP-QGDVL 661
T+++ KFS++F NCP+ +PG+ +PV++ Y+ +P+ +YI +A+ T IH + GD+L
Sbjct: 380 TMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDIL 439
Query: 662 VFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIF 721
VFLTGQEEI+ L E + L ++II P+Y+ LP E Q +IF+PTP+ RKV+
Sbjct: 440 VFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVL 499
Query: 722 ATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPG 781
ATNIAETS+TIDG+ YVIDPGF K N+Y P GM QLL P S+A +QR GRAGR GPG
Sbjct: 500 ATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPG 559
Query: 782 KCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSA 841
KCFR++T+ ++ +E+ PEI R NL +T+L+L ++G+ DL+ F MD P + +
Sbjct: 560 KCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKS 619
Query: 842 LEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTN-KCS---DEMLTIVAML- 896
LE L+ L AL+ +G +T LGK M +FP EP +K L + T+ +C +E LTIV+ML
Sbjct: 620 LENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLH 679
Query: 897 SIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHL 956
++F Q+ D + DH+ L +FN+WR S +S+S+C + + + +
Sbjct: 680 ETPSLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTM 734
Query: 957 KRALDVRQQLFNIFKKMNL---------PIVSCHGDVDC-IRKTLVSGFFRNAAKRESQA 1006
R ++R QLF +K+ L I + G ++ I + +SGF N +
Sbjct: 735 LRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQL-GPT 793
Query: 1007 GYKTL---TDGTQVAISPGSSLFGKEYD-------YVLYHSIVLTSREYMMQVTAI-ESK 1055
GY+T+ + G V++ P S LF + YVLY ++LTS+E++ I + +
Sbjct: 794 GYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEE 853
Query: 1056 WLLESAPHFYK 1066
WL++ P +K
Sbjct: 854 WLIDMVPQIFK 864
>At1g27900 [A] KOG0922 DEAH-box RNA helicase
Length = 708
Score = 493 bits (1269), Expect = e-139
Identities = 264/642 (41%), Positives = 399/642 (62%), Gaps = 34/642 (5%)
Query: 449 LPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXX 508
LP+ + +++++ V KN +VI+GETGSGK+TQL+Q L G + G+I TQP
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAAV 63
Query: 509 XXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILL 568
+E+ +GE+VGY IRFED T+S+TRIKYLTDG++ RE+L +P++ YSVI+L
Sbjct: 64 SVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVIIL 123
Query: 569 DEAHERTVATDVLFALLKKAA-LQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFP 627
DEAHER++ TD+L L+K+ ++ + KV+ITSATLD +K S++F CPV+ +PGK +P
Sbjct: 124 DEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLYP 183
Query: 628 VEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKAL-DG 686
VE+LYS + + YIES+L +DIH+ EP+GD+L+F+TGQ++I+ L E+V++L +G
Sbjct: 184 VEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEG 243
Query: 687 TIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKI 746
+ + II P++ +LP E+Q R+F P P R+ I +TNIAETS+T+DGV YVID G+ K
Sbjct: 244 SCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQ 303
Query: 747 NTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQR 806
YNP GM L V IS+ QANQR GRAGRT PGKC+RLY + ++++ L T+PEIQR
Sbjct: 304 RQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQR 363
Query: 807 QNLEHTILMLKAMGIN--DLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRM 864
+L ++L LK++ + D+L F+F+D P + AL++L+ + A+DE G +T +G+ M
Sbjct: 364 TSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTM 423
Query: 865 SQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFY----RPKDKQQEAD-NRKARF 919
S P+EP LS+TL+ + C + LT+VAMLS + +P +K+++ D +
Sbjct: 424 SDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPN 483
Query: 920 HHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHE-----------------RHLKRALDV 962
YGDH+ LL +F W +NY +C N + R + DV
Sbjct: 484 GSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQPYCIVTSEGGQLYAVSAVRGMVFVKDV 543
Query: 963 RQQLFNIFKKMNLP--IVSCHGDVDCIRKTLVSGFFRNAAKRE-SQAGYKTLTDGTQVAI 1019
R+QL I +K++ S D +RK L G A+R GY+TL+ +Q+ +
Sbjct: 544 RRQLCQIMQKISKDGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQL-V 602
Query: 1020 SPGSSLF----GKEYDYVLYHSIVLTSREYMMQVTAIESKWL 1057
P S L G +YV+YH ++ T+R +M V A++ W+
Sbjct: 603 HPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWV 644
>7292966 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 555
Score = 491 bits (1265), Expect = e-138
Identities = 231/491 (47%), Positives = 344/491 (70%), Gaps = 3/491 (0%)
Query: 591 QRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMD 650
+R DLK+I+TSAT+DS KF+ +F N P IPG+TFPV+V++S DY+ESA+ +
Sbjct: 9 RRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQ 68
Query: 651 IHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFE 710
+H+ +GD+L+F+ GQE+I+ CE+L ER+ +D P L ILP+YS LPS++Q++IF+
Sbjct: 69 VHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNA-PALSILPIYSQLPSDLQAKIFQ 127
Query: 711 PTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQ 770
+ G RK + ATNIAETS+T+DG+ YVID G+ K+ YNPR+GM+ L + PISQA ANQ
Sbjct: 128 KSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQ 187
Query: 771 RKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFM 830
R GRAGRTGPG+ +RLYT+ +K+E+L TVPEIQR NL +T+L+LK++G+ DLL F FM
Sbjct: 188 RSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFM 247
Query: 831 DPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEML 890
DPPP+ ++++L +L+ L ALD G LTTLG++M++FP++P + L+ + CS E+L
Sbjct: 248 DPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVL 307
Query: 891 TIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNF 950
IV+MLS+ ++FYRPK ++ EAD + +F P DHLT LNV+ +WR++NYS ++C +F
Sbjct: 308 IIVSMLSVPSIFYRPKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHF 367
Query: 951 LHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKT 1010
+H + +++ +VRQQL +I + NL ++SC D D +RK + S +F AA+ + Y
Sbjct: 368 IHIKAMRKVREVRQQLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVN 427
Query: 1011 LTDGTQVAISPGSSLF--GKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVA 1068
L G + P S+L+ G DYV+YH +++T++EYM TA++ WL E P F+ V
Sbjct: 428 LRTGMPCHLHPTSALYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVK 487
Query: 1069 DPNGSSRKKAK 1079
+ S R+K K
Sbjct: 488 ESGRSGREKKK 498
>CE27311 [A] KOG0922 DEAH-box RNA helicase
Length = 732
Score = 491 bits (1264), Expect = e-138
Identities = 274/656 (41%), Positives = 404/656 (60%), Gaps = 18/656 (2%)
Query: 439 SLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG-MI 497
SL I++QR RLP+++ R ++ + + ++IVGETG GK+TQ+ Q+L E G + G I
Sbjct: 67 SLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQI 126
Query: 498 GCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLD 557
TQP EE C +G +VGYT+RF+D + T++K++TDG++ RE L D
Sbjct: 127 VITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILAD 186
Query: 558 PLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYF-MN- 615
PL+S+YS+I++DEAHER+ TD+L LL+K R DL++I++SATLD++ F +F MN
Sbjct: 187 PLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMNE 246
Query: 616 --------CPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQ 667
+I + G+T PV V ++ DY +SA+DT ++IH +E GD+LVFLTGQ
Sbjct: 247 TGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQ 306
Query: 668 EEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAE 727
+E++ CE L E L L ++P Y ALP+ Q + F+ TP G+RKV+ ATNIAE
Sbjct: 307 DEVEDVCEKLRELAGNLK-NCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAE 365
Query: 728 TSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLY 787
SITI G+ YVID G+ K+ + G+E L+ +S+A A QR GRAGR PGKC+RLY
Sbjct: 366 ASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLY 425
Query: 788 TESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFN 847
ES F+ TVPEIQR + TIL LKA+G+ ++ F ++ PPP M++ LE L+
Sbjct: 426 PESEFE-RFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYA 484
Query: 848 LQALDEEGFLTT-LGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPK 906
L A+DE LT+ LG +M++FP+ P SK LL S CS EM+TIVAM+ IQ+VF P
Sbjct: 485 LGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPY 544
Query: 907 DKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQL 966
++ +AD + +F GDH+T+LNVF ++ E+ SK +C+ +F++ R L RA +VR QL
Sbjct: 545 RQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQL 604
Query: 967 FNIFKKMNLPIVSCHGDVDC---IRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGS 1023
+ K+ + VS G ++C IR+ LV+GFF AA+ Y T+ + + GS
Sbjct: 605 VRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGS 664
Query: 1024 SLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKKAK 1079
S+ K+ DY + ++ + VT IE +WL E APH+Y+ + K+ +
Sbjct: 665 SIMFKK-DYPKWVIFTEVMQDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRMR 719
>Hs21362038 [A] KOG0922 DEAH-box RNA helicase
Length = 779
Score = 474 bits (1220), Expect = e-133
Identities = 256/663 (38%), Positives = 403/663 (60%), Gaps = 33/663 (4%)
Query: 450 PVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXX 509
P+ + R+++I AV N FL++ G TGSGKTTQL +YL E G S GMIG TQP
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 510 XXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLD 569
EEM C +G +VGY +RF+D +S T IKY+TDG + + L DP ++++SVI+LD
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 173
Query: 570 EAHERTVATDVLFALLKK-----AALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGK 624
EAHERT+ TD+LF LLKK + ++ LKV++ SAT++ K S +F NCP+ +IPG+
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 625 TFPVEVLYSS------KPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILY 678
+PV + + + YI++ + TMDIH+NE GD+LVFLTGQ EI+ CE+L+
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 679 ERVKALD-------GTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSIT 731
+ +++D T+ L+ILP Y ++ ++ Q RIF P P G RK + +TNI+ TS+T
Sbjct: 294 QMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLT 353
Query: 732 IDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESA 791
IDG+ YV+D GF K +NPR+G++ L V PIS+++A QR GRAGRT GKCFR+Y++
Sbjct: 354 IDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDF 413
Query: 792 FKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQAL 851
+ M + +PEI+R +L +L LK + I+D++ F ++DPP + ++ AL++L+ A+
Sbjct: 414 WNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAI 473
Query: 852 DEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDK--Q 909
D G +T LG M +FP+ P L+ ++ + + C D +L I AMLS++NVF RP D Q
Sbjct: 474 DRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQ 533
Query: 910 QEADNRKARFHHPYG---DHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQL 966
+EA+ R G D TL +F + + S S+C +++H R L A V QL
Sbjct: 534 KEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQL 593
Query: 967 FNIFKKM----NLPIVSCHGDV-DCIRKTLVSGFFRNAAKRESQAGYKTLTD-GTQVAIS 1020
+ +K+ + P + G + +R+ L +G+F+N A+R + T+ G+ V I
Sbjct: 594 RELIRKLKQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIH 653
Query: 1021 PGSSLFGKE--YDYVLYHSIVLTSREYMMQVTAIESKWLLESAP--HFYKVADPNGSSRK 1076
P S+L +E +++++H +++T++ Y V I +W+ + P H + D + +R+
Sbjct: 654 PSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARR 713
Query: 1077 KAK 1079
+ +
Sbjct: 714 EVR 716
>SPBC1711.17 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 912
Score = 464 bits (1195), Expect = e-130
Identities = 242/588 (41%), Positives = 356/588 (60%), Gaps = 19/588 (3%)
Query: 283 WEIRQLISSGAASIEDYPELKDDYNISQPTNSEADGTXXXXXXXXXXXXXXXXXXPKFLK 342
WE ++I+SG + P L+ DY++ + P FL
Sbjct: 344 WEKNRMITSGVSKA---PGLESDYSLMEERRVHL---------------LVDELRPHFLD 385
Query: 343 GQVKPDRKYELPSITKVPKGSLNRSAMVGSYTMXXXXXXXXXXXXXXXXQLNKSKQLADP 402
G +K + + P+ L +A +GS + L +
Sbjct: 386 GAEFSSKKVGDITSVRDPQSDLAINARLGSRLVRERREFRERQKAASAATSLAGTSLGNV 445
Query: 403 SSSKVLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAV 462
K ++ + A RS + + +EQRE LP + +R+QL+ +
Sbjct: 446 MGLKDSNDEDAKAGTTPVKVAGRSEQSNKKDTEFARTKSYREQREFLPAFAVREQLLSVI 505
Query: 463 IKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNV 522
NQ L++VGETGSGKTTQL Q+L E+G GMIGCTQP EEMG +
Sbjct: 506 RDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRL 565
Query: 523 GEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLF 582
G VGY+IRFED T T IKY+TDG++ RE+L+ + +YSVI++DEAHER++ TD+L
Sbjct: 566 GSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILM 625
Query: 583 ALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIE 642
LLKK +R D+K+++TSAT++S KFS +F P IPG+T+PV+++++ P DY+E
Sbjct: 626 GLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVE 685
Query: 643 SALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPS 702
+A+ + IH+++P GD+LVF+TGQE+I+ CEI+ +R+ L P L ILP+YS +P+
Sbjct: 686 AAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDA-PRLSILPIYSQMPA 744
Query: 703 EIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSP 762
++Q++IF+ G RKV+ ATNIAETS+T+ G+ YV+D G+ K+ YN ++G++ L V+P
Sbjct: 745 DLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTP 804
Query: 763 ISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGIN 822
ISQA ANQR GRAGRTGPG +RLYTE A+ EM T+PEIQR NL +T+L+LK++G+
Sbjct: 805 ISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGVE 864
Query: 823 DLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPME 870
++ +F+FMD PP ++++L EL+ L ALD G LTTLGK+MS FPM+
Sbjct: 865 EISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMD 912
>ECU09g0150 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 784
Score = 433 bits (1113), Expect = e-121
Identities = 245/635 (38%), Positives = 376/635 (58%), Gaps = 23/635 (3%)
Query: 443 KEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQP 502
+E +RLP+ R L++ V K++ +V+VGETGSGK+TQ+ +YL +EG +KG+IGCTQP
Sbjct: 100 REVSQRLPIESFRDDLMEFVGKHRVIVLVGETGSGKSTQVPKYLYQEGYGDKGIIGCTQP 159
Query: 503 XXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSR 562
EMGC VGY+IRF+ T+ T+I+Y+T+G++ +E L D ++ R
Sbjct: 160 RRAAAISLASTLKREMGC----AVGYSIRFDSTTTQDTKIRYMTEGILLQELLADKMLRR 215
Query: 563 YSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIP 622
YSV++LDEAHERT D+ LLK A +R DL++II SAT+++ K YF CP I
Sbjct: 216 YSVVILDEAHERTTNLDISMGLLKLALKERDDLRIIIMSATIEAQKLCNYF-GCPAFNIE 274
Query: 623 GKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVK 682
G+++PVE Y S DY+E + + IH N +GD+LVF+TG+++++ I+ ++
Sbjct: 275 GRSYPVETRYLSVNVDDYVEWTVKKILYIHENCGEGDILVFVTGRDDVEGVVGIVNHCIR 334
Query: 683 -ALDGTIPE----LIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYY 737
G E L +LP YS LP E+Q+R+F+ K RK I +TN+AETS+TI + Y
Sbjct: 335 NKCFGEGSEGGRGLKVLPFYSQLPEEMQNRVFQ-AEKDVRKCIVSTNVAETSLTIPNIGY 393
Query: 738 VIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEML 797
VID G KI+ Y+ G E L+ PIS+A A+QR GRAGRT PG C+R+YT ++N+ML
Sbjct: 394 VIDTGLQKISVYSYDTG-ESLVTVPISRANADQRTGRAGRTRPGVCYRMYTADTYENDML 452
Query: 798 PNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFL 857
P+ VPEIQR N+ + +L+L G++D+L F+F+D P + + AL L L A+ G L
Sbjct: 453 PSPVPEIQRTNIHNVVLLLLKHGVHDILGFDFVDRPSEELIQGALLGLHRLGAVCSRGLL 512
Query: 858 TTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKA 917
T +GK MS+ ++P L++ +L + +E+ +I +MLS+ VF+R DK +
Sbjct: 513 TKVGKEMSELRLDPPLARMVLGAAGYGAVNEIASIASMLSVHEVFHRDFDK-------SS 565
Query: 918 RFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPI 977
H D LTLLN+FN + +C + E LKRA + ++ + ++M +PI
Sbjct: 566 PLCHQGCDFLTLLNIFNAFIRQKNRSEWCNKMKVSEHALKRATETKRAVLMSLREMGVPI 625
Query: 978 VSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHS 1037
S +D I++ ++S N A+R + GY L++ + P S L Y++++
Sbjct: 626 SSTR-SLDKIQRCIISSVHYNVARRRGK-GYVCLSNFRACMVHPSSVLADSYSQYIIFYK 683
Query: 1038 IVLTSREYMMQVTAIESKWLLESAPHFYKVADPNG 1072
+ T EYM + I + +LE A +Y+ D NG
Sbjct: 684 HLSTRAEYMYCCSNISPQVILEEAGCYYR--DRNG 716
>SPAC145.03 [A] KOG0922 DEAH-box RNA helicase
Length = 647
Score = 426 bits (1095), Expect = e-118
Identities = 241/628 (38%), Positives = 374/628 (59%), Gaps = 10/628 (1%)
Query: 438 TSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEG-LSNKGM 496
T+ P+ Q++ LP+ + R QL+ AV +NQ +++G TG GKTTQ+ Q+L E G S G+
Sbjct: 14 TNTPLNIQKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGI 73
Query: 497 IGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALL 556
IGCTQP E+ G GY+I+F+ S +T+IKY+TDG++ E
Sbjct: 74 IGCTQPRRLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFF 133
Query: 557 DPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNC 616
DPL+ RYS+++LDE HERT++TD+L +LK+ +R D +++++SA++D++K S++F
Sbjct: 134 DPLLERYSIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQD 193
Query: 617 PV--IEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCC 674
V + I GK FPVE L+ KP +Y++SA++T ++I+ P GD+LVFL+G++EI+ C
Sbjct: 194 KVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCI 253
Query: 675 EILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDG 734
+ + + + L+ LP+++ L + Q R+F RKVIF+TNIAETSITIDG
Sbjct: 254 KKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDG 313
Query: 735 VYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKN 794
+ YV+D GF+K YNP +L+ PIS++ A QR GRAGRT GK FRLYTE A+ +
Sbjct: 314 IVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-S 372
Query: 795 EMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEE 854
M +I ++ +L LK +G+ ++L F F PP +++ALE+L+ L LDE
Sbjct: 373 LMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDES 432
Query: 855 GFLT-TLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRP-KDKQQEA 912
G LT LG ++S ++ +SK LL S C+ E+L+I ++L+ VFY P + +A
Sbjct: 433 GNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDA 492
Query: 913 DNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKK 972
+ F GD +T LNVF + + +C N+L+ + L++ALD+R L K
Sbjct: 493 FVAHSSFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNK 552
Query: 973 MNLPIVSCHGDVDC--IRKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEY 1030
++P DC I K L+ GF RN A ++ YKT+ G QV + S L K+
Sbjct: 553 FSIPTAQRLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTI-GGKQVWLDSSSVLHEKKT 611
Query: 1031 DYVLYHSIVLTSRE-YMMQVTAIESKWL 1057
+++Y S V + + ++ ++ IES WL
Sbjct: 612 PWIMYSSAVESETQIFVKNISKIESFWL 639
>7297620 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 703
Score = 414 bits (1063), Expect = e-115
Identities = 255/650 (39%), Positives = 381/650 (58%), Gaps = 34/650 (5%)
Query: 436 KRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG 495
KRTS I++Q++ LPV+ R +++ + N ++I+ ETGSGKTTQ+ Q+L G + G
Sbjct: 57 KRTS--IEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG 114
Query: 496 MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREAL 555
MIG TQP +E+ +G+ VGYT+RFED TS T+I++LTDG++ RE++
Sbjct: 115 MIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESI 174
Query: 556 LDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQR-----PDLKVIITSATLDSDKFS 610
D L+ +YSVI+LDEAHERTV D+LF ++K A +R +LKV++TSAT+D D F
Sbjct: 175 KDRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFG 234
Query: 611 KYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDI-----------HINEP--Q 657
YF NC + + G+T+PV V+++ + DYI + L +DI N P Q
Sbjct: 235 NYF-NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLPRRVDIPNRARGNRVIGPTNTPACQ 293
Query: 658 GD-VLVFLTGQEEIDTCCEILYERVKALDGT-IPELIILPVYSALPSEIQSRIFEPTPKG 715
G+ ++V T + C + +D T +L + +Y+ L Q F PTP
Sbjct: 294 GESIVVQPTDCTSLKISCSLF-----QIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPAN 348
Query: 716 SRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRA 775
RKVI ATNIAETSITI G+ VID GF K ++N G++ L IS+AQA QR GRA
Sbjct: 349 VRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRA 408
Query: 776 GRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPK 835
GR G C+R YT+ A + T PEI R N +L L A+ I D NF+F+DPP +
Sbjct: 409 GRDADGTCYRAYTK-AEMDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLE 466
Query: 836 SFMVSALEELFNLQAL--DEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIV 893
+ SA + L L A+ ++ ++T LG++M Q+P++P SK LL + + C +E+L++V
Sbjct: 467 DGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLV 526
Query: 894 AMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHE 953
++LS +VF +K + A A+F +GDHLTLLNVFN + +S K +C N+L+
Sbjct: 527 SVLSSDHVFVSNSEKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNL 586
Query: 954 RHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQAGYKTLTD 1013
R L A +VR+QL I + ++L + S D++ ++K +++GFF N A + Y T +
Sbjct: 587 RSLTYARNVRRQLREISEHLHLALNS-SDDIEMLKKCILNGFFENIAVLQRDGFYITASG 645
Query: 1014 GTQVAISPGSSLFGK-EYDYVLYHSIVLTSREYMMQVTAIESKWLLESAP 1062
+ I P S L GK + Y+L+ IV T + ++ QVT I +W+ E P
Sbjct: 646 NIRSKIHPSSVLHGKYKPSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP 695
>YKL078w [A] KOG0922 DEAH-box RNA helicase
Length = 735
Score = 412 bits (1060), Expect = e-114
Identities = 242/683 (35%), Positives = 384/683 (55%), Gaps = 31/683 (4%)
Query: 424 ERSRMKERVSYG--KRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQ 481
+RS + ++Y K + + + RE LPVY+ +++++ + N V++GETGSGK+TQ
Sbjct: 54 QRSNKENVLTYKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQ 113
Query: 482 LTQYLDEEGLSNK--GMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSR 539
+ Q++ E+ K G I TQP +E GC +GE+VGY++RF++ T++R
Sbjct: 114 IPQFVLEKLYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTR 173
Query: 540 TRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAAL-QRPDLKVI 598
TR+KYLTDGM+ RE +++ + YSVI++DEAHERTV TD++ LK RPDL++I
Sbjct: 174 TRLKYLTDGMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRII 233
Query: 599 ITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQG 658
+ SATL ++KFS++F N P++ + G+ F V+ Y P D +++ + + I+ E G
Sbjct: 234 VMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELG 293
Query: 659 DVLVFLTGQEEIDTCCEILYERVKAL--DGTIPELIILPVYSALPSEIQSRIFEPTPKGS 716
D+L FL GQEEID I+ + K + + +P ++ P+Y+ALP+ QS +F P
Sbjct: 294 DILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFK 353
Query: 717 RKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAG 776
RKV+F+TNIAETS+TI GV +V+D G K+ + ++G+ LL PISQA A QR GRAG
Sbjct: 354 RKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAG 413
Query: 777 RTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKS 836
R GK FRLY ES + ++ + PEI R ++ +LMLK G++DLLN+ + + P K
Sbjct: 414 RESEGKSFRLYCESDYV-KLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKE 472
Query: 837 FMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAML 896
+V L+EL+ L ALD G +T G++M+ P++P LS L+ + C +++ IV+ L
Sbjct: 473 AIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCL 532
Query: 897 SIQNVFYRPKDKQQEADNRK----ARFHHPYGDHLTLLNVFNRW--------RESNYSKS 944
S++N+ P ++++ N + YGD + L +F+ + S+
Sbjct: 533 SVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERND 592
Query: 945 FCTTNFLHERHLKRALDVRQQLFNIFKKMNLPI---------VSCHGD-VDCIRKTLVSG 994
+C + R K + VR QL K++ I + G+ + I K ++G
Sbjct: 593 WCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGEDGELISKILKCFLTG 652
Query: 995 FFRNAAKRESQAGYKTLTDGTQVAISPGSSLF-GKEYDYVLYHSIVLTSREYMMQVTAIE 1053
F +N A Y+T++ G ++I P S LF K ++Y V T++ Y V+ IE
Sbjct: 653 FIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGYARNVSRIE 712
Query: 1054 SKWLLESAPHFYKVADPNGSSRK 1076
WL E + VA S K
Sbjct: 713 LSWLQEVVTNAAAVAKQKVSDSK 735
>ECU11g0860 [A] KOG0922 DEAH-box RNA helicase
Length = 664
Score = 389 bits (1000), Expect = e-107
Identities = 231/606 (38%), Positives = 357/606 (58%), Gaps = 25/606 (4%)
Query: 464 KNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVG 523
K+Q L+I G+TG GKTT++ +YL L G I C+QP +M +G
Sbjct: 72 KSQVLLIQGDTGCGKTTKIPKYL----LRKYGKIVCSQPRRIAAVSIAKKVAVDMKGKIG 127
Query: 524 EEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFA 583
E+VGY+IRF+D +S RTR+KY+TDG++ RE D + +Y V+++DEAHER+V D+L
Sbjct: 128 EDVGYSIRFDDMSSGRTRLKYVTDGVLLREIKNDKHLKKYDVVIIDEAHERSVNIDILLG 187
Query: 584 LLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQM-DYIE 642
LK +R DL+V+I SATL+S+KF+ +F C +EI + FP+E+ + K + DY++
Sbjct: 188 YLKSILSERKDLRVVIMSATLNSEKFASFF-RCQTVEIRHRMFPLEIFFLKKSDVADYVD 246
Query: 643 SALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPS 702
A+ T + IH E GD+LVFLTG++EI++ EIL E + G E + +YS L
Sbjct: 247 EAMKTVVQIHRGEESGDILVFLTGRDEINSGREILMEVL----GNDAE--VCCIYSTLSP 300
Query: 703 EIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSP 762
E Q +F T K RK++ ATNIAETSITI+GV YV+D G +K Y+ GM+ L V
Sbjct: 301 EEQEAVFRKTKK--RKIVLATNIAETSITIEGVRYVVDSGRAKQMRYSASFGMDILEVVW 358
Query: 763 ISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGIN 822
IS+AQA QR GRAGRT GK FR+Y++ ++ +M NT PEI NL +L LK++G++
Sbjct: 359 ISKAQAKQRAGRAGRTQAGKVFRMYSKEEYQ-KMDDNTTPEIFCCNLGKIVLELKSIGVD 417
Query: 823 DLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVT 882
D++NF +D P S + ALE L+ L+A+ +G +T++G + S P++P L+ +L+ S
Sbjct: 418 DIVNFNLIDKPDASNVKKALEMLYYLRAIGGDGKITSIGVKASTIPLDPELAVSLIVSSE 477
Query: 883 NKCSDEMLTIVAMLSIQNVFYR-PKDKQQEADNRKARFHH--PYGDHLTLLNVFNRWRES 939
C +++ I AMLS+ NV+ P+ Q AR H GDH LL ++ RW ++
Sbjct: 478 LGCLEDVSIIAAMLSVGNVWLDVPRYSQSYKAFLGARAAHFDKRGDHFLLLKIYRRWEKT 537
Query: 940 NYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNA 999
+ S FL+ + + + + +++QL ++F+ C D I +L +G+F N
Sbjct: 538 GFKISHLKRWFLNVKTMLQTVKIKKQLCSMFRS------PCKSDESGILPSLCAGYFMNV 591
Query: 1000 AKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLE 1059
AK ++ Y ++ + T I S + + Y+LYH++ T +EY + + LL+
Sbjct: 592 AKLVGES-YVSIFNDTPCFIHYTSCMSRQNAKYILYHTLCRTGKEYARYCVGVTLEDLLK 650
Query: 1060 SAPHFY 1065
A H +
Sbjct: 651 GANHMF 656
>Hs20336300 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 743
Score = 361 bits (927), Expect = 3e-99
Identities = 230/683 (33%), Positives = 369/683 (53%), Gaps = 32/683 (4%)
Query: 408 LSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQF 467
L +S+ D +++A + + Y R +KE RE LP+++ + ++ +++NQ
Sbjct: 22 LDSSDGDEEEVLACEDLELNPFDGLPYSSRYYKLLKE-REDLPIWKEKYSFMENLLQNQI 80
Query: 468 LVIVGETGSGKTTQLTQYLDEEGLS---NKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGE 524
+++ G+ GK+ Q+ Q+ E LS G + CTQ +EM N+G
Sbjct: 81 VIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICTQVHKQTVVQLALRVADEMDVNIGH 140
Query: 525 EVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFAL 584
EVGY I FE+ ++ T ++Y TD M+QRE + +P + Y VI+LD+ HER++ATDVL L
Sbjct: 141 EVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGL 200
Query: 585 LKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESA 644
LK L RP+LK+II S+ K + Y+ N PVIE+ K PVEV+Y S+ Q D ES
Sbjct: 201 LKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESI 259
Query: 645 LDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEI 704
L +IH + +GD++VFL +++I+ CE +Y+ L+ + EL+++P+Y P E
Sbjct: 260 LRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQGSN-LNPDLGELVVVPLY---PKE- 314
Query: 705 QSRIFEPTPKGS-------RKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQ 757
+ +F+P + R+V+ T+ E I + V +VID G + YNPR+
Sbjct: 315 KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANS 374
Query: 758 LLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLK 817
L++ PISQ+QA RK G + GK F LYTE +M P E+Q NL +L +K
Sbjct: 375 LVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMK 434
Query: 818 AMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTL 877
+ I L + +FM+ P ++ ALE+L L ALD +G L+ G MS+FP++P LSK++
Sbjct: 435 RIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSI 494
Query: 878 LASVTNKCSDEMLTIVAMLSIQNVF-YRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRW 936
LAS C DE+LTI AM++ N F + P ++ A F HP GDH TL++++ +
Sbjct: 495 LASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAY 554
Query: 937 RESNYSKS-------FCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVS-CHGDVD--- 985
+++ + S +C FL+ L+ A +R +L I K++ LP G +
Sbjct: 555 QDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAELLEIIKRIELPYAEPAFGSKENTL 614
Query: 986 CIRKTLVSGFFRNAAKRESQAG-YKTLTDGTQVAISP--GSSLFGKEYDYVLYHSIVLTS 1042
I+K L+SG+F A+ +G Y LT + P G S+ K ++VL+H ++
Sbjct: 615 NIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLHPLSGYSITKKMPEWVLFHKFSISE 674
Query: 1043 REYMMQVTAIESKWLLESAPHFY 1065
Y+ + I + ++ P +Y
Sbjct: 675 NNYIRITSEISPELFMQLVPQYY 697
>SPBC19C2.01 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 739
Score = 349 bits (895), Expect = 2e-95
Identities = 172/329 (52%), Positives = 236/329 (71%), Gaps = 1/329 (0%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGM-IGCT 500
++ R+ LPVY+ + L+ A+ + Q L+IV ETGSGKTTQL Q+L E G + I CT
Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCT 470
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLM 560
QP +EM +G+EVGY+IRFE+ TS +T IKYLTDGM+ RE L +P +
Sbjct: 471 QPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDL 530
Query: 561 SRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIE 620
+ YSVI++DEAHERT+ TD+LF L+K A RPDLKV+I+SAT+D++KFS YF PV
Sbjct: 531 ASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFY 590
Query: 621 IPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYER 680
+PG+ +PV++ Y+ +P+ +YI++A+ T + IH +P GD+LVFLTGQ+EI+ E + E
Sbjct: 591 VPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQEL 650
Query: 681 VKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVID 740
+ L IPE+I+ P+Y+ LPSE+Q++IF+PTP G+RKV+ ATNIAETSITIDGV +VID
Sbjct: 651 CRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVID 710
Query: 741 PGFSKINTYNPRVGMEQLLVSPISQAQAN 769
GF K N YNPR GME L+ P S+A A+
Sbjct: 711 SGFVKQNMYNPRTGMESLVSVPCSRASAD 739
>Hs22066120 [A] KOG0922 DEAH-box RNA helicase
Length = 516
Score = 345 bits (885), Expect = 2e-94
Identities = 182/452 (40%), Positives = 282/452 (62%), Gaps = 23/452 (5%)
Query: 545 LTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKK-----AALQRPDLKVII 599
+TDG + + L DP ++++ VI+LDEAHERT+ TD+LF LLKK +A ++ LKV++
Sbjct: 1 MTDGCLLKHILGDPSLTKFRVIILDEAHERTLTTDILFGLLKKLFQEKSANRKEHLKVVV 60
Query: 600 TSATLDSDKFSKYFMNCPVIEIPGKTFPVEVLYSS------KPQMDYIESALDTTMDIHI 653
SAT++ K S +F NCP+ +IPG+ +PV + + + YI++ + TMDIH+
Sbjct: 61 MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHL 120
Query: 654 NEPQGDVLVFLTGQEEIDTCCEILYERVKALD-------GTIPELIILPVYSALPSEIQS 706
NE GD+LVFLTGQ EI+ CE+L++ +++D + L+ILP Y ++ ++ Q
Sbjct: 121 NEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTILDGLLILPCYGSMTTDQQR 180
Query: 707 RIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQA 766
RIF P P G RK + +TNI+ TS+TIDG YV+D GF K +NPR+G++ L V PIS++
Sbjct: 181 RIFLPPPPGIRKCVISTNISATSLTIDGTRYVVDGGFVKQLNHNPRLGLDILEVVPISKS 240
Query: 767 QANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLN 826
+A QR GRAGRT GKCFR+Y++ + M + +PEI+R +L +L LK + I+D++
Sbjct: 241 EALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIR 300
Query: 827 FEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCS 886
F ++DPP + ++ AL++L+ A+D G +T LG M +FP+ P L+ ++ + + C
Sbjct: 301 FPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCE 360
Query: 887 DEMLTIVAMLSIQNVFYRPKDK--QQEADNRKARFHHPYG---DHLTLLNVFNRWRESNY 941
D +L I AMLS++NVF RP D Q+EA+ R G D TL +F + + S
Sbjct: 361 DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGA 420
Query: 942 SKSFCTTNFLHERHLKRALDVRQQLFNIFKKM 973
S+C +++H R L A V QL + +K+
Sbjct: 421 PASWCQKHWIHWRCLFSAFRVEAQLRELIRKL 452
>At5g10370_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1427
Score = 345 bits (884), Expect = 3e-94
Identities = 221/650 (34%), Positives = 348/650 (53%), Gaps = 46/650 (7%)
Query: 449 LPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXX 508
LP+Y R+Q++ + + Q +V++GETGSGK+TQL Q+L + G++ I CTQP
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 509 XXXXXXXEEM-GCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVIL 567
EE GC V T F +++ Y+TD + + + D +S S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 568 LDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFP 627
+DEAHER++ TD+L ALLKK +R DL+++I SAT D+ + S+YF +C ++ + G+ FP
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 628 VEVLYSSKPQMD---------YIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILY 678
VE++YS + Y+ + ++IH E +G +L FLT Q E++ CE
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFI 545
Query: 679 ERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYV 738
P I LP++ L E Q R+F+ P G RKVIFATNIAETS+TI GV YV
Sbjct: 546 T---------PSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYV 595
Query: 739 IDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLP 798
ID G K + Y PR GM L V +SQ+ A QR GRAGRT PG+C+RLY+++ F + M
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-DSMNL 654
Query: 799 NTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEG--- 855
N PEI+R +L +L + A+G+N++ F F+D P + A++ L L A+ E+
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 856 FLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVA-MLSIQNVFYRPK--DKQQEA 912
LT G + + +EP L K +L ++ E + + A M + ++F R D + +A
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 913 DNRKARFHHPYGDHLTLLNVFNRWRE--SNYSKSFCTTNFLHERHLKRALDVRQQLFNIF 970
D K +F + GD TLL+V+ W +C N L+ + ++R D ++L I
Sbjct: 775 DRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKEL-EIC 833
Query: 971 KKMNLPIVSCHGDV----------DCIRKTLVSGFFRNAAKRE--SQAGYKTLTDGTQVA 1018
+ L +VS V ++ +++ N A +Q GY+ G QV
Sbjct: 834 IERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQ 893
Query: 1019 ISPGSSL--FGKEYDYVLYHSIVLTSREYMMQVTA--IESKWLLESAPHF 1064
+ P SL FG++ +V++ ++ +Y++ VTA E+ ++L+ P F
Sbjct: 894 LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPF 943
>SPAPB1A10.06c [AJ] KOG0926 DEAH-box RNA helicase
Length = 1183
Score = 338 bits (868), Expect = 2e-92
Identities = 233/791 (29%), Positives = 384/791 (48%), Gaps = 124/791 (15%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLS-----NKGM 496
I+E R LP+ Q++++ + N ++I G TGSGKTTQL Q+L E G S N GM
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 497 IGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALL 556
I TQP EE+ +V Y IRF+ + T IK++TDG++ RE
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 557 DPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPD----------LKVIITSATLDS 606
D L++ YS +++DEAHER+V TD+L LL + R + LK+II SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 607 DKFSK----YFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLV 662
FS+ + + P+I+I + +PV + ++ + DY++ A D IH P G +LV
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 663 FLTGQEEIDTCCEILYERVK---------------------------------------- 682
FLTGQ+E++ C++L +R
Sbjct: 630 FLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSS 689
Query: 683 ----ALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYV 738
D + +LP+YS L +E Q ++F+ +P+G R I ATN+AETSITI + YV
Sbjct: 690 SSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYV 749
Query: 739 IDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLP 798
+D G +K YN + +++ V IS+A A+QR GRAGRTGPG C+RLY+ + F +
Sbjct: 750 VDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPL 809
Query: 799 NTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLT 858
+++PEI R +E +L +K M I+++ NF F P +S + +L+ L NL A+D EG LT
Sbjct: 810 HSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLT 869
Query: 859 TLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVF-------YRPKDKQQE 911
LG++MS FP+ P SK L+ + C ++ +V+ LSI +F Y DK
Sbjct: 870 KLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSR 929
Query: 912 AD------------------------NRKARFH--HPYGDHLTLLNVFNRWRESNYSKSF 945
++ N +RF P L+LL+ + ++ + F
Sbjct: 930 SEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKF 989
Query: 946 CTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVS----------CHGDVDCIRKTLVSGF 995
C N+L E+ L+ ++R+Q+ + K+ + + + +R+ + S +
Sbjct: 990 CKENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIKALRQFIASAY 1049
Query: 996 FRNAAKRESQ-AGYKTL-TDGTQVAISPGSSLFGKEYDYVLYHSI--VLTSREYMMQVTA 1051
A + + GY TL G++V + + +YV+Y S+ + R YM +T
Sbjct: 1050 IDQVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSEYVVYLSLHESRSGRVYMSPLTE 1109
Query: 1052 IESKWLLESAPH-----------FYKVADPNGSSRKKAKIVP-LNDRFAQSKDSWRLSSI 1099
I + L A + + + + +++++ ++P L+ SW L ++
Sbjct: 1110 ISPEHLARLAKNTTLLSYSKPLSYPPIRYLDNATKRECWVIPILSANIGTGSPSWNLPAV 1169
Query: 1100 RANRDKKLGGK 1110
+ + K++ G+
Sbjct: 1170 QIIQ-KRINGR 1179
>At4g01020_1 [A] KOG0922 DEAH-box RNA helicase
Length = 1424
Score = 336 bits (861), Expect = 1e-91
Identities = 218/650 (33%), Positives = 345/650 (52%), Gaps = 46/650 (7%)
Query: 449 LPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXX 508
LP+Y R+Q++ + Q +V++GETGSGK+TQL Q+L + G++ I CTQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 509 XXXXXXXEEM-GCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVIL 567
EE GC V T F +++ Y+TD + + + D +S S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 568 LDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFP 627
+DEAHER++ TD+L ALL+K +R DL+++I SAT D+++ S+Y +C ++ + G+ FP
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 628 VEVLYSSKPQMD---------YIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILY 678
VE++YS + Y + ++IH E +G +L FLT Q E++ CE
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERF- 541
Query: 679 ERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYV 738
P I LP++ L E Q +F+ P G RKVIFATNIAETS+TI GV YV
Sbjct: 542 --------VAPSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYV 592
Query: 739 IDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLP 798
ID G K + Y PR GM L V +SQ+ A QR GRAGRT PG+C+RLY+++ F + M
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-DSMNL 651
Query: 799 NTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEG--- 855
N PEI+R +L +L + A+GI+++ FEF+D P + A++ L L A+ E+
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVL 711
Query: 856 FLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVA-MLSIQNVFYRPK--DKQQEA 912
LT G + + +EP L K +L ++ E + + A M + ++F R D + +A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 913 DNRKARFHHPYGDHLTLLNVFNRWRE--SNYSKSFCTTNFLHERHLKRALDVRQQLFNIF 970
D K +F + GD TLL+V+ W + +C N L+ + ++R D ++L I
Sbjct: 772 DRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKEL-EIC 830
Query: 971 KKMNLPIVSCHGDV----------DCIRKTLVSGFFRNAAKRE--SQAGYKTLTDGTQVA 1018
+ L +VS V ++ +++ N A Q GY+ QV
Sbjct: 831 IERELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVALTSQQVQ 890
Query: 1019 ISPGSSL--FGKEYDYVLYHSIVLTSREYMMQVTA--IESKWLLESAPHF 1064
+ P SL FG++ +V++ ++ +Y++ VTA E+ ++L+ P F
Sbjct: 891 LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPF 940
>Hs18497286 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1008
Score = 312 bits (800), Expect = 2e-84
Identities = 237/765 (30%), Positives = 360/765 (46%), Gaps = 112/765 (14%)
Query: 395 KSKQLADPSSSKVLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVYRM 454
+++ D S +L +E D + + K + Y + ++ RE+LP Y M
Sbjct: 158 RNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRY-----IEMQHFREKLPSYGM 212
Query: 455 RQQLIDAVIKNQFLVIVGETGSGKTTQLTQYL----DEEGLSNKGMIGCTQPXXXXXXXX 510
+++L++ + +Q VI GETG GKTTQ+TQ++ E G + I CTQP
Sbjct: 213 QKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISV 272
Query: 511 XXXXXEEMG--CNVGEEVGYTIRFEDETSSRT-RIKYLTDGMMQREALLDPLMSRYSVIL 567
E C G GY IR + + I Y T G++ + DP +S S I+
Sbjct: 273 AERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIV 332
Query: 568 LDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFP 627
LDE HER + +DVL ++K R DLKVI+ SATL+++KFS+YF NCP+I IPG TFP
Sbjct: 333 LDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFP 392
Query: 628 V------------------------------------------EVLYS------------ 633
V E +Y
Sbjct: 393 VVEYLLEDVIEKIRYVPEQKEHRCQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRR 452
Query: 634 --SKPQMDYIESALDTTMDIHI----------NEPQGDVLVFLTGQEEIDTCCEILYERV 681
S +D IE D +D+++ E G +LVFL G + I T ++L +V
Sbjct: 453 RYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 512
Query: 682 KALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDP 741
+ +I+P++S +P+ Q+++F+ TP G RK++ ATNIAETSITID V YVID
Sbjct: 513 MFKSD---KFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDG 569
Query: 742 GFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPN-T 800
G K ++ + + + +S+A A QRKGRAGR PG C+ LY + + +L +
Sbjct: 570 GKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLY--NGLRASLLDDYQ 627
Query: 801 VPEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLT 858
+PEI R LE L +K + + + F MDPP ++ ++ L L ALD++ LT
Sbjct: 628 LPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT 687
Query: 859 TLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEAD-NRKA 917
LG +++ P+EP + K +L C D +LTI A LS ++ F P K++ AD RK
Sbjct: 688 PLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKE 747
Query: 918 RFHHPYGDHLTLLNVFNRWRES-----NYSKSFCTTNFLHERHLKRALDVRQQL------ 966
DHLT++N F W E+ Y K +C FL L+ +++ Q
Sbjct: 748 LAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG 807
Query: 967 --FNIFKKMNLPIVSCHGDVDCIRKTLV-SGFFRNAAKRESQAGYK-------TLTDGTQ 1016
F + P + + D + I K ++ +G + AK G K T TDG
Sbjct: 808 AGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGL- 866
Query: 1017 VAISPGSSLFGK---EYDYVLYHSIVLTSREYMMQVTAIESKWLL 1058
VA+ P S + Y++++YH + TS Y+ T + LL
Sbjct: 867 VAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 911
>At1g48650 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1167
Score = 312 bits (800), Expect = 2e-84
Identities = 231/759 (30%), Positives = 367/759 (47%), Gaps = 109/759 (14%)
Query: 403 SSSKVLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQ--------------RER 448
+SS+ L+N + + T + S +ER+ + L K+Q R+
Sbjct: 210 NSSESLANG-YGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQKMVGFRKT 268
Query: 449 LPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQY-LDEEGLSNKGM---IGCTQPXX 504
LP Y+ + L+ A+ NQ +V+ GETG GKTTQL QY L+ E + +G I CTQP
Sbjct: 269 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 328
Query: 505 XXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYS 564
E G +GE VGY +R E TR+ + T G++ R L+D + +
Sbjct: 329 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 388
Query: 565 VILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPG- 623
+++DE HER + D L +LK +RPDLK+I+ SATL+++ FS YF P + IPG
Sbjct: 389 HVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGF 448
Query: 624 --------------------------------KTFPVEVLYSSKPQMDYIESALDTTMDI 651
KT+ ++ K + I SA++ ++
Sbjct: 449 TYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEA 508
Query: 652 --------------------------------HI--NEPQGDVLVFLTGQEEIDTCCEIL 677
HI E G VLVF+TG ++I++ L
Sbjct: 509 ADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQL 568
Query: 678 YERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYY 737
+L G ++++L + ++ S Q IF+ P+G RK++ ATN+AETSITI+ V Y
Sbjct: 569 --EAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVY 626
Query: 738 VIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEML 797
VID G +K +Y+ LL S IS+A A QR+GRAGR PG+C+ LY ++
Sbjct: 627 VIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYE-AFA 685
Query: 798 PNTVPEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEG 855
PE+ R L+ L +K++G+ + F + PP + +A+E L + ALD++
Sbjct: 686 DYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDE 745
Query: 856 FLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNR 915
LT LGK +S P+EP L K L+ C D ++T+VA LS+++ F P DK+ A+
Sbjct: 746 NLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETA 805
Query: 916 KARFH-HPYGDHLTLLNVFNRWRESNYSKS---FCTTNFLHERHLKRALDVRQQLFNIFK 971
+++F Y DHLTL+ +N W+++ + S +C NFL + LK +R+Q FN+ K
Sbjct: 806 RSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLK 865
Query: 972 KMNL--PIVSC---HGDVDCIRKTLVSGFFR---NAAKRESQAGYKTLTDGTQVAISPGS 1023
+ +L I C D +R + +G F + +E KT+ DG + S S
Sbjct: 866 EASLIDNIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYS--S 923
Query: 1024 SLFGK----EYDYVLYHSIVLTSREYMMQVTAIESKWLL 1058
S+ G + +++++ V + ++ TA+ LL
Sbjct: 924 SVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLL 962
>At2g35920 [A] KOG0920 ATP-dependent RNA helicase A
Length = 993
Score = 311 bits (797), Expect = 4e-84
Identities = 235/722 (32%), Positives = 361/722 (49%), Gaps = 100/722 (13%)
Query: 428 MKERVSYGKRTSL--PIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQY 485
+KER K T +K RE+LP ++M+++ +++V +NQ LV+ GETG GKTTQL Q+
Sbjct: 205 LKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQF 264
Query: 486 LDEEGLSN-KGM---IGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTR 541
+ EE +S+ +G I CTQP E G ++GE VGY IR E + S +TR
Sbjct: 265 ILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTR 324
Query: 542 IKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITS 601
+ + T G++ R LDP ++ S +L+DE HER + D L +L+ +RPDL++I+ S
Sbjct: 325 LLFCTTGVLLRR--LDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMS 382
Query: 602 ATLDSDKFSKYFMNCPVIEIPGKTFPVEVLY----------------------SSKPQMD 639
AT+++D FS YF N P + IPG TFPV L+ SS+ +
Sbjct: 383 ATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRR 442
Query: 640 YIESALD--TTM--DIHIN-------------------------------------EPQG 658
ES D TT+ DI IN E G
Sbjct: 443 ESESKKDDLTTLFEDIDINSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGG 502
Query: 659 DVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRK 718
+LVFLTG +EI E + + G + ++LP++ ++P+ Q IF+ P RK
Sbjct: 503 AILVFLTGWDEISKLLEKI--NMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRK 560
Query: 719 VIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRT 778
++ ATNIAE+SITID V YV+D G +K +Y+ + LL S IS+A A+QR+GRAGR
Sbjct: 561 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRV 620
Query: 779 GPGKCFRLYTESAFKNEMLPN-TVPEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPK 835
G C+RLY + + + P +PEI R L+ L +K++ + + +F + + PP
Sbjct: 621 QAGVCYRLYPKVIY--DAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDA 678
Query: 836 SFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAM 895
+ +A+E L + AL++ LT LG+ + P++P + K LL +C + LTI A
Sbjct: 679 LAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAA 738
Query: 896 LSIQNVFYRPKDKQQEADNRKARF-HHPYGDHLTLLNVFNRWRES---NYSKSFCTTNFL 951
L+ ++ F P ++++EAD K F DH+ LL + +R++ K FC NFL
Sbjct: 739 LAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFL 798
Query: 952 HERHLKRALDVRQQLFNIFKKMNLPIVSCHG-------DVDCIRKTLVSGFFRNAA---K 1001
L+ D+R Q ++ + S D++ I L +G + N +
Sbjct: 799 SPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCKR 858
Query: 1002 RESQAGYKTLTDGTQVAISPGS-----SLFGKEYDYVLYHSIVLTSREYMMQVTAIESKW 1056
R + + T G +V I PGS +LF Y++Y V T+ Y+ T I
Sbjct: 859 RGKRTAFYTKELG-KVDIHPGSVNARVNLF--SLPYLVYSEKVKTTSVYIRDSTNISDYA 915
Query: 1057 LL 1058
LL
Sbjct: 916 LL 917
>CE27603 [A] KOG0922 DEAH-box RNA helicase
Length = 974
Score = 298 bits (763), Expect = 3e-80
Identities = 179/513 (34%), Positives = 281/513 (53%), Gaps = 26/513 (5%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
+++ ++ LP+ ++++ + NQ L++ G+TG GK+TQ+ QYL + G + + CTQ
Sbjct: 85 LRKLQKELPIAERAGEIVELLKTNQVLIVAGDTGCGKSTQVPQYLLKAGFTG---VACTQ 141
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P E G EV + IRFE S +T++ +LT+G++ R+ D L+
Sbjct: 142 PRRIACTALARRVAYETLNQYGSEVAFQIRFETTKSQKTKLLFLTEGLLLRQMEKDSLLE 201
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEI 621
+Y+VI+LDE HER + +D+L LL+ +R DLK+I+ SAT++ D F YF PV+++
Sbjct: 202 KYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLILMSATINLDLFKGYFEGAPVVQV 261
Query: 622 PGKTFPVEVLYSSKPQM----DYIESALDTTMDIHINE---------PQGDVLVFLTGQE 668
PG+ FP++V + Q D +D + I E +GD L+FL G
Sbjct: 262 PGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRGDALIFLNGVA 321
Query: 669 EIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAET 728
EI E L + +G IIL ++S L E Q ++F+ P G RK I +TN+AET
Sbjct: 322 EISMVAEHLKNYAELTNG----WIILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAET 377
Query: 729 SITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYT 788
S+TIDG+ +VID G + + P G ++L +S+A ANQRKGRAGRTGPG C+RLY+
Sbjct: 378 SVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYS 437
Query: 789 ESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGIN-DLLNFEFMDPPPKSFMVSALEEL-F 846
+ F+ +M TV EI R +L+ L + ++ + D F F++ P + + LE L F
Sbjct: 438 QEQFE-KMDDFTVSEINRVSLQEMALKMISLNLGLDPRTFPFIEKPSEDVLNEGLEVLKF 496
Query: 847 NLQALDEEG---FLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFY 903
+ G LT LG +S+ P+E ++K L+ + MLT+ A LS+Q+ F
Sbjct: 497 QRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFT 556
Query: 904 RPKDKQQEADNRKARFHHPYGDHLTLLNVFNRW 936
++ E R+A P GD TL+++F W
Sbjct: 557 NRSYRELEIVERRASLTSPLGDPFTLISIFREW 589
>ECU10g0680 [A] KOG0923 mRNA splicing factor ATP-dependent RNA helicase
Length = 797
Score = 294 bits (752), Expect = 6e-79
Identities = 203/647 (31%), Positives = 332/647 (50%), Gaps = 57/647 (8%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
I+E R+ LP+Y + +++ AV + + + G G GKTTQ+ Q+L E GL+ MIG TQ
Sbjct: 175 IEEYRKTLPIYYEKAEIVYAVRTSAVVFVTGAPGCGKTTQIPQFLYEGGLAAGKMIGVTQ 234
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P EEM N+ GY I++E +S TRIK +TDG++ +E D L+S
Sbjct: 235 PRRISATSISSRINEEMNENL---CGYKIKYESTVTSETRIKVMTDGVLIKEIQDDFLLS 291
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQR----PDLKVIITSATLDSDKFSKYFMNCP 617
RYSVI++DE HER D+L +++ + R DLK+++ SAT D+D+F + +
Sbjct: 292 RYSVIIVDEVHERNTNIDLLISIIPRIMKVRRARGDDLKLVLMSATGDADEFKAFLGDVT 351
Query: 618 VIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHI------------------------ 653
V P K F V Y K + DY+++A + I +
Sbjct: 352 VFVCPEKRFRVSTFYEEKTEADYLDAAYERVKKIVLSSSGARKRRRVREGRSDIIGSEVL 411
Query: 654 NEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTP 713
N+ +LVFLT ++EI Y+ L+ + ++ +LP++S+L Q +F+ P
Sbjct: 412 NDKSASILVFLTSKQEI-------YQLKSRLEDSGMDITVLPLHSSLSKSEQKLVFDKMP 464
Query: 714 KGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKG 773
+RKVI ATNIAETSITI V +V+D G K N G+ + + I+++ A QR G
Sbjct: 465 --NRKVILATNIAETSITIPDVVFVVDSGKVK-NRLVDSEGVTKYSIDFITKSNAIQRTG 521
Query: 774 RAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPP 833
RAGRTGPG C+RLY+ A++ + P+I R+ L+ +L L ++GI D+ +F F+ P
Sbjct: 522 RAGRTGPGVCYRLYSGEAYER-FYESMKPQILREPLDGVVLNLLSLGIRDIYSFPFLSKP 580
Query: 834 PKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIV 893
+ + +A+ L L A+D++ LT GK+MS++P+EP L++ L A + S E++ +V
Sbjct: 581 GTTSINNAIARLQGLGAVDKDLKLTGTGKKMSRYPVEPRLARLLCAQGLDDISTEIIVLV 640
Query: 894 AMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHE 953
+++S + + + K F D L L++++ + +S K+FC +
Sbjct: 641 SLIS-------SGAEVRRNHSNKRYFEGSKSDFLVQLSIYSDFLKSKSRKAFCKEMGMSY 693
Query: 954 RHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDC---IRKTLVSGFFRNAAKRESQAGYKT 1010
A+ + L NI VS D IR + GF + A S + +
Sbjct: 694 TTAVEAMKMTGYLMNISGGTADRNVSLDLSPDTCLKIRNIIYRGFVDHLAIPSSGSHFFR 753
Query: 1011 LTDGTQVAISPGSSLFGKEYDYVLYHSIVLT-SREYMMQVTAIESKW 1056
T+ ++ S+ D+V++ S+V + + YM +TA+E W
Sbjct: 754 ----TEEVLASRDSISVCNGDFVVFESLVSSKGKLYMKNITAVEEAW 796
>7298709 [A] KOG0920 ATP-dependent RNA helicase A
Length = 674
Score = 279 bits (713), Expect = 2e-74
Identities = 197/591 (33%), Positives = 289/591 (48%), Gaps = 71/591 (12%)
Query: 444 EQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLS----NKGMIGC 499
E R++LP + +I AV +NQ ++IVG TG GKTTQ+ Q L ++ +S + I C
Sbjct: 77 EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIIC 136
Query: 500 TQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETS-SRTRIKYLTDGMMQREALLDP 558
TQP E ++G VGY IR E + R I Y T G++ ++ DP
Sbjct: 137 TQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDP 196
Query: 559 LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPV 618
LM SV++LDE HER+V TD+L LLK RPDLKVI+ SAT+ F YF NCP+
Sbjct: 197 LMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPM 256
Query: 619 IEI-----PGKTFPVEVLYSS----------------------------KPQMDYIESAL 645
I P K +E + S +P + I ++
Sbjct: 257 FRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNSY 316
Query: 646 DTTM-------------DIHI----------NEPQGDVLVFLTGQEEIDTCCEILYERVK 682
D+ + DI NEP+G +LVFL G ++I IL ++ K
Sbjct: 317 DSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNIL-DKPK 375
Query: 683 ALDGTI--PELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVID 740
G + + P++S + S Q +F P G RKVI +T IAETS+TID V YVI+
Sbjct: 376 TSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVIN 435
Query: 741 PGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNT 800
G +K Y+ ++ L +++A QR+GRAGR PG C+ L++ A ++ M
Sbjct: 436 SGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSR-AREDRMDDIP 494
Query: 801 VPEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLT 858
PEI R LE IL LK + I+D F ++ P + +E L ++ALD+ G LT
Sbjct: 495 TPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLT 554
Query: 859 TLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKAR 918
LG +++ P++P + K +L S C D + + A LS ++ FY P K+ D K R
Sbjct: 555 PLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRR 614
Query: 919 F-HHPYGDHLTLLNVFNRWRESNYS---KSFCTTNFLHERHLKRALDVRQQ 965
+ DHL + N +R+S YS + FC NFL L++ ++ Q
Sbjct: 615 MARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQ 665
>7293584_2 [A] KOG0922 DEAH-box RNA helicase
Length = 838
Score = 273 bits (699), Expect = 8e-73
Identities = 171/563 (30%), Positives = 290/563 (51%), Gaps = 33/563 (5%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
+++ + LP+ R R+ L +A+ ++ +++ G+TG GK+TQ+ QYL + G + I CTQ
Sbjct: 10 LRQTQRNLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQ 66
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P E+ + G V + IRFE + T I ++T+G++ R+ + +
Sbjct: 67 PRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLD 126
Query: 562 RYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYF--MNCPVI 619
+Y ++LDE HER + D L + K RP LK+I+ SAT++ + F YF ++
Sbjct: 127 QYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLV 186
Query: 620 EIPGKTFPVEVLY--------------SSKPQMDYIESA-----LDTTMDIHINEPQGDV 660
++PG+ FP+++ Y S + Q + I+ A L + +GDV
Sbjct: 187 QVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDV 246
Query: 661 LVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVI 720
L+F++G EI++ E ++E A + T ++LP++S QS++F+ P+G RK I
Sbjct: 247 LIFVSGVNEIESVVEAVHEY--ATEQT--HWLVLPLHSGQAIADQSKVFDYAPEGMRKCI 302
Query: 721 FATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGP 780
+TNIAETS+T+DGV +V+D G K ++ ++L +S++ A+QRKGRAGRTGP
Sbjct: 303 VSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGP 362
Query: 781 GKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVS 840
G CFRLYT + N PEI R L+ +L + +MG+ D+ F F++ P +
Sbjct: 363 GVCFRLYTAEQY-NAFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQ 421
Query: 841 ALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN 900
+ L AL E +T LG+ ++ P+E + K LL +++LT+ AMLS+QN
Sbjct: 422 TILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQN 481
Query: 901 VFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRW----RESNYSKSFCTTNFLHERHL 956
Q + +GD TL+ ++N W + ++ +C + E+
Sbjct: 482 PLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIEEQRF 541
Query: 957 KRALDVRQQLFNIFKKMNLPIVS 979
+RQQ I + + + S
Sbjct: 542 YEVTKLRQQFQRILESCGMVVAS 564
>YLR419w [A] KOG0920 ATP-dependent RNA helicase A
Length = 1435
Score = 258 bits (660), Expect = 3e-68
Identities = 195/678 (28%), Positives = 328/678 (47%), Gaps = 80/678 (11%)
Query: 393 LNKSKQLADPSSSKVLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPVY 452
++ K+ + SSS+ + + L R +R+ + S+ + RE+LP +
Sbjct: 553 ISNGKRSINNSSSRKFTKTTISEDTLSVL---REEYTKRIKSSEYKSMQLV--REQLPAW 607
Query: 453 RMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYL-----DEEGLSNKGMIGCTQPXXXXX 507
+ ++ +ID + KN+ ++I GETGSGK+TQ+ Q++ E+G K I CTQP
Sbjct: 608 KKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISA 667
Query: 508 XXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVIL 567
+E GEEVGY IR ++T + TRIK++T G++ R M ++++
Sbjct: 668 IGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNARTMLENTIVV 727
Query: 568 LDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFP 627
+DE HER++ TD++ L+K + +K+++ SAT++ D F K+F I G+TFP
Sbjct: 728 IDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFP 787
Query: 628 V-----EVLYSSKPQMDYIESAL---DTTMDIHINEPQ---------------------- 657
+ E + S E AL D ++D N+ Q
Sbjct: 788 ITDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLC 847
Query: 658 ----------------GDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALP 701
G ++VFL G EI+ CC +L + D ++LP++SAL
Sbjct: 848 QVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEAD-----FMVLPLHSALT 902
Query: 702 SEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVS 761
E Q R+F+ G RKV+ +TNIAETSITID ID G +K YNP+ +L+ S
Sbjct: 903 PEDQKRVFKKY-HGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIES 961
Query: 762 PISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGI 821
IS+A+ QR+GRAGR G ++L++++ ++N+M+ +PEI+R LE L +KAMGI
Sbjct: 962 FISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGI 1021
Query: 822 NDLLNF--EFMDPPPKSFMVSALEELFNLQALDE-EGFLTTLGKRMSQFP-MEPGLSKTL 877
D+ F +D PP + A L + +DE + LT LG+ +S P M+ K L
Sbjct: 1022 KDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLL 1081
Query: 878 LASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNV---FN 934
+ + C+D + +V++L I + + + +E + + GD +L + +
Sbjct: 1082 IYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKKLLCKYESRGDLFAVLEIVRDYF 1141
Query: 935 RWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMN-LPIVSCHGDV--------- 984
+ ++S+ + + N L + Q ++I K + LP+ G +
Sbjct: 1142 KIKDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERN 1201
Query: 985 -DCIRKTLVSGFFRNAAK 1001
D +R L F+ + A+
Sbjct: 1202 FDILRAILTGAFYPHIAR 1219
>Hs19525735 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 599
Score = 254 bits (648), Expect = 7e-67
Identities = 186/603 (30%), Positives = 304/603 (49%), Gaps = 25/603 (4%)
Query: 518 MGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVA 577
M +G EVG +I ED T T +++ D ++ +E + V++LDEA ER+VA
Sbjct: 1 MDLTLGHEVGSSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVA 60
Query: 578 TDVLFALLKKAALQR--PDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTF--PVEVLYS 633
+D L LL+ A L++ DL+V++ + K ++ N P++ IP + P + +
Sbjct: 61 SDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPIYWD 120
Query: 634 SKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKAL--DGTIPEL 691
+ P D +E+A +++ E GDVLVFL +EEI CCE L V++L G P
Sbjct: 121 TIPP-DRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLLLQGLPPR- 178
Query: 692 IILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNP 751
+LP++ +Q+ ++E +RKV+ +A+ S ++ + +VID G + YNP
Sbjct: 179 -VLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNP 234
Query: 752 RVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEH 811
R+ E ++ PIS+ QA R+ RA PG C LY +S + E P P + +NL
Sbjct: 235 RIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSS 294
Query: 812 TILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEP 871
+L+LK I + F+D P ++ ALE+L L ALD++G L+ LG +S+FP+ P
Sbjct: 295 LVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAP 354
Query: 872 GLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLN 931
L+K LLAS C DEMLT+ AML+ F RP +EA R+A H GDH +L+
Sbjct: 355 ELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRRA-LEHTDGDHSSLIQ 413
Query: 932 VFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPI----VSCHGDVDCI 987
V+ + +S +++C L+ L +A +R +L + +++ LP+ + +
Sbjct: 414 VYEAFIQSGADEAWCQARGLNWAALCQAHKLRGELLELMQRIELPLSLPAFGSEQNRRDL 473
Query: 988 RKTLVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLF------GKEYDYVLYHSIVLT 1041
+K LVS +F A+ G L VA + + +VLYH+ ++
Sbjct: 474 QKALVSEYFLKVARDTDGTGNYLLLTHKHVAQLSSYCCYRSRRAPARPPPWVLYHNFTIS 533
Query: 1042 SREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKKAKIVPLNDRFAQSKDSWRLSSIRA 1101
+ V+ I+ + L+E AP ++ P SR + L + A S + SS +
Sbjct: 534 KDNCLSIVSEIQPQMLVELAPPYFLSNLPPSESRD--LLNQLREGMADSTAGSKSSSAQE 591
Query: 1102 NRD 1104
RD
Sbjct: 592 FRD 594
>Hs22041930 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1035
Score = 249 bits (637), Expect = 1e-65
Identities = 210/744 (28%), Positives = 351/744 (46%), Gaps = 92/744 (12%)
Query: 396 SKQLADPSSSK----VLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPV 451
S L+DP + K +L E Q + W R P+ ++ +LPV
Sbjct: 231 SGPLSDPITGKPYVPLLEAEEVRLSQSLLELWRRRG-------------PVWQEAPQLPV 277
Query: 452 YRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDE----EGLSNKGMIGCTQPXXXXX 507
R +++A+ ++ +VI G+TG GKTT++ Q L E EG + + TQP
Sbjct: 278 DPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISA 337
Query: 508 XXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRT-RIKYLTDGMMQREALLDPLMSRYSVI 566
E+G ++ VG+ +R E + SR + + T G++ R+ +P + S +
Sbjct: 338 VSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHV 397
Query: 567 LLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTF 626
++DE HER V TD L LLK P L++++ SAT D+++FS+YF CPVI++PG +
Sbjct: 398 IVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMY 457
Query: 627 PV---------------EVLYSSKPQMDYIESALD----TTMDIHIN---EPQGDVLVFL 664
PV + L+ + E ALD T + +HI+ EP G +L FL
Sbjct: 458 PVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFL 516
Query: 665 TGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATN 724
G +EI + L E AL + +ILPV+S +P Q IF+ P G RK++ ATN
Sbjct: 517 PGWQEIKGVQQRLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATN 573
Query: 725 IAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCF 784
IAETSITI+ + +V+D G K Y+ + + L +S+A QR+GRAGR G +
Sbjct: 574 IAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAY 633
Query: 785 RLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEE 844
L+ S + +M+P VPEI R LE+ +L K + + + EF+ S + A++E
Sbjct: 634 HLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 691
Query: 845 ----LFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN 900
L + LD+ +LTTLG+R++ +P L+K ++ + +C +L +V+ L+ ++
Sbjct: 692 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 750
Query: 901 VFYRPKDKQQEADNRKARFHHPYG-DHLTLLNVFN------RWRESNYSKSFCTTNFLHE 953
F + E D KA H G DHL + RW++ + +++ N L+
Sbjct: 751 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYA 810
Query: 954 RHL-------KRALDVRQQLFNIFKKMNLPIVSCH-----GDVDCIRKTLVSGFFRNAAK 1001
L K+ + + F + K + + S + + ++ L++G + N
Sbjct: 811 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLI- 869
Query: 1002 RESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESA 1061
+ + G T Q P S + + +L H + + T + S+WL
Sbjct: 870 -QVRQGKVT----RQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWLT--- 916
Query: 1062 PHFYKVADPNGS--SRKKAKIVPL 1083
++ NGS R +++ PL
Sbjct: 917 --YFMAVKSNGSVFVRDSSQVHPL 938
>Hs20336294 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1194
Score = 249 bits (637), Expect = 1e-65
Identities = 210/744 (28%), Positives = 351/744 (46%), Gaps = 92/744 (12%)
Query: 396 SKQLADPSSSK----VLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPV 451
S L+DP + K +L E Q + W R P+ ++ +LPV
Sbjct: 390 SGPLSDPITGKPYVPLLEAEEVRLSQSLLELWRRRG-------------PVWQEAPQLPV 436
Query: 452 YRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDE----EGLSNKGMIGCTQPXXXXX 507
R +++A+ ++ +VI G+TG GKTT++ Q L E EG + + TQP
Sbjct: 437 DPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISA 496
Query: 508 XXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRT-RIKYLTDGMMQREALLDPLMSRYSVI 566
E+G ++ VG+ +R E + SR + + T G++ R+ +P + S +
Sbjct: 497 VSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHV 556
Query: 567 LLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTF 626
++DE HER V TD L LLK P L++++ SAT D+++FS+YF CPVI++PG +
Sbjct: 557 IVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMY 616
Query: 627 PV---------------EVLYSSKPQMDYIESALD----TTMDIHIN---EPQGDVLVFL 664
PV + L+ + E ALD T + +HI+ EP G +L FL
Sbjct: 617 PVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFL 675
Query: 665 TGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATN 724
G +EI + L E AL + +ILPV+S +P Q IF+ P G RK++ ATN
Sbjct: 676 PGWQEIKGVQQRLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATN 732
Query: 725 IAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCF 784
IAETSITI+ + +V+D G K Y+ + + L +S+A QR+GRAGR G +
Sbjct: 733 IAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAY 792
Query: 785 RLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEE 844
L+ S + +M+P VPEI R LE+ +L K + + + EF+ S + A++E
Sbjct: 793 HLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 850
Query: 845 ----LFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN 900
L + LD+ +LTTLG+R++ +P L+K ++ + +C +L +V+ L+ ++
Sbjct: 851 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 909
Query: 901 VFYRPKDKQQEADNRKARFHHPYG-DHLTLLNVFN------RWRESNYSKSFCTTNFLHE 953
F + E D KA H G DHL + RW++ + +++ N L+
Sbjct: 910 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYA 969
Query: 954 RHL-------KRALDVRQQLFNIFKKMNLPIVSCH-----GDVDCIRKTLVSGFFRNAAK 1001
L K+ + + F + K + + S + + ++ L++G + N
Sbjct: 970 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLI- 1028
Query: 1002 RESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESA 1061
+ + G T Q P S + + +L H + + T + S+WL
Sbjct: 1029 -QVRQGKVT----RQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWLT--- 1075
Query: 1062 PHFYKVADPNGS--SRKKAKIVPL 1083
++ NGS R +++ PL
Sbjct: 1076 --YFMAVKSNGSVFVRDSSQVHPL 1097
>Hs20336290 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1155
Score = 249 bits (637), Expect = 1e-65
Identities = 210/744 (28%), Positives = 351/744 (46%), Gaps = 92/744 (12%)
Query: 396 SKQLADPSSSK----VLSNSEFDARQLVATAWERSRMKERVSYGKRTSLPIKEQRERLPV 451
S L+DP + K +L E Q + W R P+ ++ +LPV
Sbjct: 351 SGPLSDPITGKPYVPLLEAEEVRLSQSLLELWRRRG-------------PVWQEAPQLPV 397
Query: 452 YRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDE----EGLSNKGMIGCTQPXXXXX 507
R +++A+ ++ +VI G+TG GKTT++ Q L E EG + + TQP
Sbjct: 398 DPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISA 457
Query: 508 XXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRT-RIKYLTDGMMQREALLDPLMSRYSVI 566
E+G ++ VG+ +R E + SR + + T G++ R+ +P + S +
Sbjct: 458 VSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLEGVSHV 517
Query: 567 LLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTF 626
++DE HER V TD L LLK P L++++ SAT D+++FS+YF CPVI++PG +
Sbjct: 518 IVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMY 577
Query: 627 PV---------------EVLYSSKPQMDYIESALD----TTMDIHIN---EPQGDVLVFL 664
PV + L+ + E ALD T + +HI+ EP G +L FL
Sbjct: 578 PVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEP-GGILCFL 636
Query: 665 TGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATN 724
G +EI + L E AL + +ILPV+S +P Q IF+ P G RK++ ATN
Sbjct: 637 PGWQEIKGVQQRLQE---ALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATN 693
Query: 725 IAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCF 784
IAETSITI+ + +V+D G K Y+ + + L +S+A QR+GRAGR G +
Sbjct: 694 IAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAY 753
Query: 785 RLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEE 844
L+ S + +M+P VPEI R LE+ +L K + + + EF+ S + A++E
Sbjct: 754 HLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDE 811
Query: 845 ----LFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN 900
L + LD+ +LTTLG+R++ +P L+K ++ + +C +L +V+ L+ ++
Sbjct: 812 AVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT-RD 870
Query: 901 VFYRPKDKQQEADNRKARFHHPYG-DHLTLLNVFN------RWRESNYSKSFCTTNFLHE 953
F + E D KA H G DHL + RW++ + +++ N L+
Sbjct: 871 PFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYA 930
Query: 954 RHL-------KRALDVRQQLFNIFKKMNLPIVSCH-----GDVDCIRKTLVSGFFRNAAK 1001
L K+ + + F + K + + S + + ++ L++G + N
Sbjct: 931 PSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLI- 989
Query: 1002 RESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVTAIESKWLLESA 1061
+ + G T Q P S + + +L H + + T + S+WL
Sbjct: 990 -QVRQGKVT----RQGKFKPNSVTYRTKSGNILLHKSTIN-----REATRLRSRWLT--- 1036
Query: 1062 PHFYKVADPNGS--SRKKAKIVPL 1083
++ NGS R +++ PL
Sbjct: 1037 --YFMAVKSNGSVFVRDSSQVHPL 1058
>SPBC15C4.05 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1428
Score = 244 bits (623), Expect = 5e-64
Identities = 186/610 (30%), Positives = 286/610 (46%), Gaps = 88/610 (14%)
Query: 446 RERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGC--TQPX 503
R +LP R+ +IDAV +Q L+I G+TG GK+TQ+ +L E N + T+P
Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENSTKNGKAVKIYVTEPR 687
Query: 504 XXXXXXXXXXXXEEMGCNVG-----EEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDP 558
+E+G N E VGY++R + + + T + Y+T G R +
Sbjct: 688 RISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGN 747
Query: 559 LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPV 618
+ + +++DE HER++ +D+L + Q P LK+II SATL+++KF YF +
Sbjct: 748 EIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNL 807
Query: 619 IEIPGKTFPVEVLY-------------------------------------SSKPQMD-- 639
I IPGKT+PV Y S+K D
Sbjct: 808 ITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQDASISNKSAEDAI 867
Query: 640 ---------YIESALDTTMDIHINE---PQGD------VLVFLTGQEEIDTCCEILYERV 681
Y E A++ + +++ + +GD VLVFL G EI RV
Sbjct: 868 VEMNLIPAWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEI--------LRV 919
Query: 682 KALDGTIP------ELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGV 735
K+L +P + I ++S L S Q +F PKG RK++ +TNIAET +TI V
Sbjct: 920 KSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDV 979
Query: 736 YYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNE 795
VID G + YN R + +L + +S+A A QR GRAGR G C+ L+++ +
Sbjct: 980 TCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQ 1039
Query: 796 MLPNTVPEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDE 853
L PEI R NL+ +L +K + D+ + + +DPP + ++ ALE+L + AL E
Sbjct: 1040 FLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSE 1099
Query: 854 EGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEAD 913
LT LGK +SQ P++ L K L+ KC D +IVAML+I + F + D + A+
Sbjct: 1100 NEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSAN 1159
Query: 914 NRKARF--HHPYGDHLTLLNVFNRWRESNYS------KSFCTTNFLHERHLKRALDVRQQ 965
+ F + D + + + WRE S SF +L+ L ++ Q
Sbjct: 1160 KARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQ 1219
Query: 966 LFNIFKKMNL 975
L + K M L
Sbjct: 1220 LLSELKDMKL 1229
>SPCC895.09c [A] KOG0920 ATP-dependent RNA helicase A
Length = 1327
Score = 241 bits (615), Expect = 5e-63
Identities = 182/589 (30%), Positives = 285/589 (47%), Gaps = 61/589 (10%)
Query: 445 QRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGM----IGCT 500
+RE+LP + R++++DA+ +Q +VI GETGSGK+TQ+ Q++ + LS+ + CT
Sbjct: 573 EREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCT 632
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPL- 559
QP E VG+EVGY++ E S T +++ T G++ R L
Sbjct: 633 QPRRISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLG 692
Query: 560 -MSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPV 618
+S S +++DE HER++ D+L LLK + P+LKVI+ SAT++SD F YF N
Sbjct: 693 FLSTLSCVVVDEVHERSIENDILLTLLKLVISRIPNLKVILMSATVNSDTFKYYFGNAGH 752
Query: 619 IEIPGKTFPVEVLY---------------------SSKPQMDY-IESALDTTMDIHINEP 656
+ I G+TFP++ Y + ++DY + S L +++D +
Sbjct: 753 LHIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGSS 812
Query: 657 QGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGS 716
G +LVFL G I C +K+ DG+ E +LP++++L + Q R F+ K
Sbjct: 813 SGSILVFLPGVSNIARCIR----EIKSKDGSKFE--VLPLHASLNTSEQRRCFKTYTK-- 864
Query: 717 RKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAG 776
RK+I ATNIAETSITID V VID G K Y+ + + S+A QR+GRAG
Sbjct: 865 RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAG 924
Query: 777 RTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAM--------------GIN 822
R G C++LYT + ML T PE+ R L L + + I
Sbjct: 925 RVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIK 984
Query: 823 DLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVT 882
+N +DPP + + AL++L + AL LT LG+ + P++ L K L+
Sbjct: 985 KFMN-SLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSI 1043
Query: 883 NKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYS 942
+ LTI A+LS ++ F EA +++ +GD L V++ W E +
Sbjct: 1044 FGYLEPALTITAILSTKSPFL----GDDEAREIRSKQSQGWGDVLADARVYHNWLEILET 1099
Query: 943 K------SFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVD 985
+ +C LH L++ R +L + + L G+ D
Sbjct: 1100 RGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTTKKLTGNFD 1148
>At1g58050 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1417
Score = 238 bits (608), Expect = 3e-62
Identities = 189/641 (29%), Positives = 299/641 (46%), Gaps = 100/641 (15%)
Query: 411 SEFDARQLVATAWERSRMKERVSYGKRTSL--PIKEQRERLPVYRMRQQLIDAVIKNQFL 468
S AR+ + A E S +K++ K+ + + R LP+ +++ ++ + + L
Sbjct: 557 SNHRARRNSSMAAECSSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVL 616
Query: 469 VIVGETGSGKTTQLTQYLDEE----GLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGE 524
V+ GETGSGKTTQ+ Q++ ++ G I CTQP E
Sbjct: 617 VVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRAITVAQRVADERCEPPPGFDN 676
Query: 525 EV-GYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFA 583
V Y +R ++ S +TR+ + T G++ R+ + D + + I++DE HER++ D L
Sbjct: 677 SVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLI 736
Query: 584 LLKKAALQR------PDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPV-----EVLY 632
+LK ++ P LKVI+ SAT+D+ +FS+YF CP+I G+T PV E +Y
Sbjct: 737 ILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIY 796
Query: 633 SSKPQMDYIESALDTTMDIHINEPQGDVLV---------------FLTGQEEIDTC---- 673
+ +S + D I + G V V +L ++ ++T
Sbjct: 797 ERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYDSI 856
Query: 674 ---------CEILYERVKALDGTIPELII------------------------------- 693
++L E + +D T E I
Sbjct: 857 KYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWL 916
Query: 694 LPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRV 753
LP++S++ S Q ++F PKG RKVI ATNIAETSITI+ V YVID G K N YNP
Sbjct: 917 LPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHK 976
Query: 754 GMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTI 813
+ ++ +S+A A QR GRAGR PG CF LYT F+ M P VPE+ R L
Sbjct: 977 KLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELC 1036
Query: 814 LMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEP 871
L +K +G+ + F + ++PP +S + SA+ L + AL+ + LT LG +++ P++
Sbjct: 1037 LHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDL 1096
Query: 872 GLSKTLLASVTNKCSDEMLTIVAMLS-IQNVFYRPKDKQQEADNRKARF----------- 919
+ K LL C +L+I A LS ++ F KD +Q D K
Sbjct: 1097 LIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKD-EQNVDRVKLALLSDKLESSSNL 1155
Query: 920 --HHPYGDHLTLLNVFNRW----RESNY--SKSFCTTNFLH 952
+ DHL ++ + +W E + ++SFC + FL+
Sbjct: 1156 NNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFLN 1196
>7293336 [A] KOG0920 ATP-dependent RNA helicase A
Length = 976
Score = 231 bits (590), Expect = 4e-60
Identities = 178/649 (27%), Positives = 306/649 (46%), Gaps = 69/649 (10%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG--MIGC 499
I+ +R LP+Y+ R+ +++ + ++Q L+I G TGSGK+TQL QY+ E ++ I
Sbjct: 202 IQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIVV 261
Query: 500 TQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDP- 558
+QP +E G G VGY IR + SS T + T G + R +D
Sbjct: 262 SQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDKK 321
Query: 559 -LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCP 617
+ +++DEAHER + TD L K + P L++++ SAT+D + S YF
Sbjct: 322 SFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGT 381
Query: 618 VIEIPGKTFPVEVLYSSK---------PQMD------------------------YIESA 644
V+++ G++F V + + P+M+ +
Sbjct: 382 VMDVEGRSFEVSIYHLEDILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPD 441
Query: 645 LDTTMDIHINE---PQGD---VLVFLTGQEEIDTCCEILYERVKALDGTIP--ELIILPV 696
+D + + + E QGD V+V+L G ++ + + L+ ++P ++ I+ +
Sbjct: 442 IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSL-------LARLESSLPREQITIILL 494
Query: 697 YSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGME 756
+S + + Q ++F P K+I +TNI +TSITI + YVID G +K+ TY+ +
Sbjct: 495 HSQVDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDAS 554
Query: 757 QLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILML 816
QL ++ ISQA A QR GRAGR G C+RLY L T+PEI R+ L+ L+
Sbjct: 555 QLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNL-YTIPEIMRRTLDEICLLT 613
Query: 817 K-AMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGL 873
K A + NF +D PPK ++ + L L LDE +T LG +++ P+ +
Sbjct: 614 KLAAPDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQI 673
Query: 874 SKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARF---HHPYGDHLTLL 930
K L+ S+ +C D M+ I A S+++ F ++ +++ + +R D L ++
Sbjct: 674 GKCLVYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVI 733
Query: 931 NVFNRWRESNYSK--SFCTTNFL----HERHLKRALDVRQQLFNIFKKMNLP---IVSCH 981
++ + FC NF+ E + A +R ++ IF+ S +
Sbjct: 734 KLYEEFTNLKRKDIGDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFN 793
Query: 982 GDVDCIRKTLVSGFFRNAAKRESQAGYKTLTDGTQ-VAISPGSSLFGKE 1029
D + IR L +G + A + + + + +G V +S S L GK+
Sbjct: 794 NDTNMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCLRGKK 842
>7302201 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1293
Score = 227 bits (578), Expect = 9e-59
Identities = 173/602 (28%), Positives = 278/602 (45%), Gaps = 72/602 (11%)
Query: 444 EQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQY-LDEEGLSNKG---MIGC 499
E RE+LP+ MR +++ A+ N ++I G TG GKTTQ+ QY LD+ S +G I
Sbjct: 379 EFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYV 438
Query: 500 TQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDE-TSSRTRIKYLTDGMMQREALLDP 558
TQP E +G+ VGY++RFE I + T G++ R+ L+
Sbjct: 439 TQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK--LEA 496
Query: 559 LMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPV 618
+ S I++DE HER V +D L +L+ PDL VI+ SAT+D+ KFSKYF CPV
Sbjct: 497 GLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPV 556
Query: 619 IEIPGKTFPVEVLYSSK--PQMDYIESA--------------------------LDTTMD 650
+E+PG+ FPV+ + D++ SA + +
Sbjct: 557 LEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCE 616
Query: 651 IHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILP--------------- 695
++ + + L+ + E L +K+ + L+ LP
Sbjct: 617 DKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNT 676
Query: 696 -------VYSALP--SEI----QSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPG 742
Y LP S+I Q ++FEP P+G K+I +TNIAETSITID + +VID
Sbjct: 677 NIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDIC 736
Query: 743 FSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVP 802
+++ + + S+ QRKGRAGR PG CF L + + F+ + N P
Sbjct: 737 KARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQ-ALEDNLTP 795
Query: 803 EIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLTTL 860
E+ R L L +K + + + +F + ++PPP ++ A L ++ LD LT L
Sbjct: 796 EMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPL 855
Query: 861 GKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLS-IQNVFYRPKDKQQEADNRKARF 919
G+ +++ P+EP L K ++ C+D M + + S VF +++ A+++KA
Sbjct: 856 GRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALS 915
Query: 920 HHPYGDHLTLLNVFNRWRE-----SNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMN 974
DH+ ++ WR + FC L + D +QQL ++ ++
Sbjct: 916 GTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAG 975
Query: 975 LP 976
P
Sbjct: 976 FP 977
>CE13245 [A] KOG0922 DEAH-box RNA helicase
Length = 1019
Score = 220 bits (561), Expect = 8e-57
Identities = 163/547 (29%), Positives = 252/547 (45%), Gaps = 96/547 (17%)
Query: 606 SDKFSKYFMNCPVIEIPGKTFPVEVLY------SSKPQMDYIESALDTTMDIHINEPQG- 658
++KF YF N V+ + G+TFP+EV + S DY+ +A+ +H+ EP+G
Sbjct: 433 AEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGR 492
Query: 659 DVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPK---- 714
D+LVFLTG EEI+ L E +L + L+ +P+Y+AL E Q F TP+
Sbjct: 493 DILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQVWFR 552
Query: 715 ------------------------------------------------GSRKVIFATNIA 726
G+RKVI +TNIA
Sbjct: 553 VKGKIGKSKIRKKDEKSKIFVARFFSRRCRHPCSGLSQKILLKFTFLSGARKVIISTNIA 612
Query: 727 ETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRL 786
ETS+TI G+ VID G K + ++ L V +S+AQA QR GRAGR PGKC+RL
Sbjct: 613 ETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRL 672
Query: 787 YTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELF 846
Y+ F ++ +PEI R NL T L L +G+ + + +DPP + +AL EL
Sbjct: 673 YSREDF-HKFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELT 731
Query: 847 NLQAL-----DEEGF-LTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQN 900
+L A+ D F LT +G +P+ P ++ L + C E + IVA +
Sbjct: 732 SLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDA 791
Query: 901 VFYRPKDKQQEA--DNRKARFHHPYGDHLTLLNVF-----------------------NR 935
+F D + +A D + RF GDH+TLL + N+
Sbjct: 792 LFSGAGDSKSDADVDRIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANK 851
Query: 936 WRESNYS---KSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLV 992
E Y+ + FC N ++E+HLK A + +QL I + + +C D +RK L
Sbjct: 852 SLEREYNQTIRKFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALA 911
Query: 993 SGFFRNAAKRESQAG-YKTLTD-GTQVAISPGSSLFGKEYDYVLYHSIVLTSREYMMQVT 1050
G F N+ + + Q Y+ + + + I P S L + Y+++ ++ T+ + +QVT
Sbjct: 912 LGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVT 971
Query: 1051 AIESKWL 1057
I+ W+
Sbjct: 972 LIDGDWV 978
Score = 138 bits (348), Expect = 4e-32
Identities = 69/166 (41%), Positives = 107/166 (63%), Gaps = 4/166 (2%)
Query: 443 KEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQP 502
K R +LP+ + QQL+ + + L+++GETGSGK+TQ+ Q G++N G I TQP
Sbjct: 155 KFSRPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQP 214
Query: 503 XXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSR 562
EMG N+G VGY +RFE+ T +T+I+Y+TDG++ R+AL+ PL+ +
Sbjct: 215 RRVAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDK 274
Query: 563 YSVILLDEAHERTVATDVLFALLKKAALQRPD----LKVIITSATL 604
YS +++DEAHER++ +DVL +L++ QR + L++II SATL
Sbjct: 275 YSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATL 320
>ECU04g0250 [A] KOG0922 DEAH-box RNA helicase
Length = 608
Score = 215 bits (547), Expect = 4e-55
Identities = 178/640 (27%), Positives = 295/640 (45%), Gaps = 93/640 (14%)
Query: 449 LPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQPXXXXXX 508
LP+ + +++ V +++ +I G TG GK+T + L S++ I +P
Sbjct: 8 LPIEECKDKILSTVERSKVCIIKGPTGCGKSTYIPYLLSSCFPSSR--IAVVEPRRIAVT 65
Query: 509 XXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMSRYSVILL 568
M E VGY +RF TR TDG E S + I++
Sbjct: 66 SLHKTLSSAM-----EGVGYKMRFNKSVGKDTRTIIYTDGSFLNEIG----ESEFDYIIV 116
Query: 569 DEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIEIPGKTFPV 628
DE HER+V TD++ LL+ + ++ KVI+ SAT+D+ K S+YF V++IPG PV
Sbjct: 117 DEVHERSVRTDIILGLLR-SNIKNIKGKVILMSATVDTAKVSRYF-KADVLDIPGAGHPV 174
Query: 629 EVLYSSKPQMDYIESALDTTMDIHIN--------EPQGD-VLVFLTGQEEIDTCCEILYE 679
++ Y + DYI + I ++ EP+ +LVFL G+E+I+ +L +
Sbjct: 175 KIEYLPECTSDYIVESYCIIKRIALSKEDSWDGFEPENKGILVFLPGEEDINDLYGLLRK 234
Query: 680 RVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVI 739
+P + + ++SAL + QS+I+EP RKVI +TNI ETS+TI G+ YV+
Sbjct: 235 --------LPAIRVYKIFSALSDKEQSKIYEPC--SLRKVILSTNICETSLTIPGIGYVL 284
Query: 740 DPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPN 799
D G K+ Y+ M L + IS+ A+QR GR RTGPG C+RLYTE+ + L
Sbjct: 285 DSGLQKVKIYDQ---MSHLGIWSISKESADQRLGRCNRTGPGTCYRLYTENMYGTLPLQQ 341
Query: 800 TVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEEL-------------- 845
+ PEI R +L L+L + N L FEF+D P ++ +SAL L
Sbjct: 342 S-PEICRSDLSQAFLLLLSYRKNP-LRFEFLDYPTRANAISALSFLLEKGCISISSIRED 399
Query: 846 ----FNLQALDEEGF---------------LTTLGKRMSQFPMEPGLSKTLLASVTNKCS 886
N + +G +T G+ + + P + LS S+
Sbjct: 400 LRCCLNSSLVRHDGAVPDPTELSLDDIRLKITRYGRTVLRHPFDVHLSHFYQQSLGRDVG 459
Query: 887 DEMLTIVAMLSIQNV-FYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSF 945
+V+++S + F + K+K Q+ D L+ +F + ES K +
Sbjct: 460 YLASILVSLVSQDSCNFLKYKNKSQKTDIE------------FLVCLFEGYLESEDKKQY 507
Query: 946 CTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRESQ 1005
C + + +H +++ +++F+ + GD++ I + + N +R
Sbjct: 508 CAKHEVGIKH----MEIAKRIFSALNRKK------DGDIEMIERVFSLAYQHNLCERMKD 557
Query: 1006 AGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSREY 1045
YK L G+ V I P S F ++ ++++ I T++ Y
Sbjct: 558 GSYKHLRGGSVVWIHPSSCFFKRKDRFIVFVDIFHTTKAY 597
>Hs4503297 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1279
Score = 211 bits (537), Expect = 5e-54
Identities = 166/602 (27%), Positives = 270/602 (44%), Gaps = 80/602 (13%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGC-- 499
I ++RE LPV + ++++A+ +N ++I G TG GKTTQ+ Q++ ++ + N C
Sbjct: 381 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 440
Query: 500 --TQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSS-RTRIKYLTDGMMQREALL 556
TQP E G G+ GY++RFE I + T G++ R+ L
Sbjct: 441 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESVLPRPHASIMFCTVGVLLRK--L 498
Query: 557 DPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNC 616
+ + S +++DE HER + T L +L+ P+++++ SAT+D+ F +YF NC
Sbjct: 499 EAGIRGISHVIVDEIHERDINTSFLLVVLRDVVQAYPEVRIVFMSATIDTSMFCEYFFNC 558
Query: 617 PVIEIPGKTFP---------VEVLYSSKPQMDYIESALD--------------------- 646
P +++ +T+P +++ + P D + D
Sbjct: 559 PSLKL-WRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGP 617
Query: 647 -TTMDI-HINEPQ-------------------GDVLVFLTGQEEIDTCCEILYERVKALD 685
T + + +NE + G VLVFL G ++Y K L+
Sbjct: 618 ETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWN-------LIYTMQKHLE 670
Query: 686 GT----IPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDP 741
ILP++S +P E Q ++F+P P G KVI +TNIAETSITI+ V YVID
Sbjct: 671 MNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDS 730
Query: 742 GFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTV 801
K+ + M S+ QRKGRAGR+ G CF L + + F+ + +
Sbjct: 731 CKQKVKLFTAHNNMTNYSTVWASKTNLEQRKGRAGRSTAGFCFHLCSRARFE-RLETHMT 789
Query: 802 PEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLTT 859
PE+ R L L +K + + + F + ++PPP ++ A L L ALD LT
Sbjct: 790 PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTP 849
Query: 860 LGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARF 919
LG+ +++ P+EP K ++ D + TI A F + KQ +R
Sbjct: 850 LGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFVN-EGKQLGYIHRNFAG 908
Query: 920 HHPYGDHLTLLNVFNRWRESNYSKS-----FCTTNFLHERHLKRALDVRQQLFNIFKKMN 974
+ + DH+ LL+VF W ++ FC L+ L+ + + QL I
Sbjct: 909 NR-FSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSG 967
Query: 975 LP 976
P
Sbjct: 968 FP 969
>At1g33390 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1237
Score = 196 bits (498), Expect = 2e-49
Identities = 133/437 (30%), Positives = 201/437 (45%), Gaps = 65/437 (14%)
Query: 690 ELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTY 749
+L +LP+Y+ L Q R+FE K R V+ ATN+AETS+TI G+ YV+D G K+ Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 750 NPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNL 809
+ + GME V ISQA A+QR GRAGRTGPG C+RLY+ + F N +++PEI + +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 810 EHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPM 869
+ IL++K+M I + NF F PP S + A L L+ALD G LT LGK MS +PM
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPM 825
Query: 870 EPGLSKTLLA-----------SVTNKCSDEMLTIVAMLSIQNVF---------------- 902
P S+ LL S N + VA LS+ N
Sbjct: 826 SPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDAD 885
Query: 903 --------YRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKSFCTTNFLHER 954
R KD++++ + RF +P D LT+ + + S FC N LH +
Sbjct: 886 KTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLK 945
Query: 955 HLKRALDVRQQLFNIFKKMNLPIVS------CHGDVDCIRKT------------------ 990
+ ++ QL + P + HG + + K+
Sbjct: 946 TMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEE 1005
Query: 991 ------LVSGFFRNAAKRESQAGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVLTSRE 1044
+ +G+ A++ Y+ V + SSL + ++Y ++LT+R
Sbjct: 1006 ELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRP 1065
Query: 1045 YMMQVTAIESKWLLESA 1061
YM T + +WL++ A
Sbjct: 1066 YMHGATRVRPEWLVKHA 1082
Score = 173 bits (439), Expect = 1e-42
Identities = 101/277 (36%), Positives = 156/277 (55%), Gaps = 34/277 (12%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNK------G 495
++E R+ LP+ M Q++++A+ ++ ++I G+TG GKTTQ+ Q+L E G +K G
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 496 MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREAL 555
+IG TQP E+G +G+EVG+ +R++ + + IK++TDG++ RE
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 556 LDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPD--------------------- 594
D L+ RYSVI+LDEAHER++ TD+L +L + R +
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQI 413
Query: 595 --LKVIITSATLDSDKF---SKYFMNC-PVIEIPGKTFPVEVLYSSKPQ-MDYIESALDT 647
LK+I+ SATL + F + F N P+IE+P + +PV + +S K + +DYI A
Sbjct: 414 TPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKK 473
Query: 648 TMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKAL 684
M IH PQG +LVF+TGQ E+D CE L + K L
Sbjct: 474 VMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
>7292573 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1280
Score = 194 bits (494), Expect = 5e-49
Identities = 126/385 (32%), Positives = 193/385 (49%), Gaps = 36/385 (9%)
Query: 620 EIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEP----------------------- 656
E PGK E L ++ Y E + T I++ EP
Sbjct: 683 EAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYIVEGSHDWP 742
Query: 657 -QGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKG 715
+G +L+FL G EI + + L + + I++P++SAL E Q+ +F+ P G
Sbjct: 743 REGTILIFLPGFGEIQSVHDSLLDNA-LFSPRAGKFILVPLHSALSGEDQALVFKKAPPG 801
Query: 716 SRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRA 775
RK++ +TNIAETS+TID +V+D G K ++ ME L + +S+A A QRKGRA
Sbjct: 802 KRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRA 861
Query: 776 GRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLN-----FEFM 830
GR PG C LYT ++ +L VPEIQR LE +L +K + N E +
Sbjct: 862 GRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETL 921
Query: 831 DPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEML 890
+ P + ++ AL L ++ ALD E LT LG ++ P++ + K +L +C D +L
Sbjct: 922 EAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVL 981
Query: 891 TIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRW----RESNY--SKS 944
TI A LS ++ F P +K+ EAD K F DHLT+LN + +W R NY S++
Sbjct: 982 TIAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRN 1041
Query: 945 FCTTNFLHERHLKRALDVRQQLFNI 969
+ + +FL L+ D++ Q +
Sbjct: 1042 YASEHFLSLNTLETIADLKYQYLEL 1066
Score = 130 bits (326), Expect = 1e-29
Identities = 72/203 (35%), Positives = 115/203 (56%), Gaps = 13/203 (6%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYL------------DEE 489
I + R++LP + ++++ + + +VI GETG GK+TQ+ Q++ +E
Sbjct: 438 IIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKE 497
Query: 490 GLSNKGMIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGM 549
L + +I CTQP E +G+ VGY IR E++ S TR+ + T G+
Sbjct: 498 NLPHVEII-CTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGI 556
Query: 550 MQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKF 609
+ R DPL+ + +++DE HER+ +D L +LK +R DLKVI+ SATL++ F
Sbjct: 557 LLRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALF 616
Query: 610 SKYFMNCPVIEIPGKTFPVEVLY 632
S YF PV++IPG+TFPV+ L+
Sbjct: 617 SDYFGGAPVLDIPGRTFPVQQLF 639
>Hs20536957 [A] KOG0920 ATP-dependent RNA helicase A
Length = 688
Score = 191 bits (486), Expect = 4e-48
Identities = 121/348 (34%), Positives = 182/348 (51%), Gaps = 10/348 (2%)
Query: 628 VEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGT 687
+ ++ K ++ IE+ L+ +D + P G +LVFL G EI E L +
Sbjct: 120 MSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRR 179
Query: 688 IPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKIN 747
+I P++S+L SE Q +F P G K+I +TNIAETSITID V YVID G K
Sbjct: 180 SNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEK 239
Query: 748 TYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQ 807
Y+ GME L + +SQA A QRKGRAGR G CF L+T + +++L +PEIQR
Sbjct: 240 RYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRV 299
Query: 808 NLEHTILMLKAMGINDLLNFE-----FMDPPPKSFMVSALEELFNLQALDEEGFLTTLGK 862
LE L +K + + N + ++PP + ++ L +L AL + LT LG
Sbjct: 300 PLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGY 359
Query: 863 RMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHP 922
++ P++ + K +L +C D LTI A L+ ++ F P DK++EA+ +K F
Sbjct: 360 HLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFA 419
Query: 923 YGDHLTLLNVFNRWRES-----NYSKSFCTTNFLHERHLKRALDVRQQ 965
D+L LL + W+ S S ++C NFL R L+ +++Q
Sbjct: 420 NSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQ 467
>Hs21717812 [A] KOG0920 ATP-dependent RNA helicase A
Length = 860
Score = 190 bits (483), Expect = 9e-48
Identities = 120/348 (34%), Positives = 182/348 (51%), Gaps = 10/348 (2%)
Query: 628 VEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGT 687
+ ++ K ++ IE+ L+ +D + P G +LVFL G EI E L +
Sbjct: 292 MSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRR 351
Query: 688 IPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKIN 747
+I P++S+L SE Q +F P G K+I +TNIAETSITID V YVID G K
Sbjct: 352 SNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEK 411
Query: 748 TYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQ 807
Y+ GME L + +SQA A QRKGRAGR G CF ++T + +++L +PEIQR
Sbjct: 412 RYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHVFTSHHYNHQLLKQQLPEIQRV 471
Query: 808 NLEHTILMLKAMGINDLLNFE-----FMDPPPKSFMVSALEELFNLQALDEEGFLTTLGK 862
LE L +K + + N + ++PP + ++ L +L AL + LT LG
Sbjct: 472 PLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGY 531
Query: 863 RMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHP 922
++ P++ + K +L +C D LTI A L+ ++ F P DK++EA+ +K F
Sbjct: 532 HLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFA 591
Query: 923 YGDHLTLLNVFNRWRES-----NYSKSFCTTNFLHERHLKRALDVRQQ 965
D+L LL + W+ S S ++C NFL R L+ +++Q
Sbjct: 592 NSDYLALLQAYKGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQ 639
Score = 145 bits (366), Expect = 3e-34
Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNK----GMI 497
I ++R+ LP + R+ +++ + K+Q +VI G TG GKTTQ+ Q++ ++ LS I
Sbjct: 11 ILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLSGPPEKVANI 70
Query: 498 GCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLD 557
CTQP +E VG VGY IR E SS TR+ Y T G++ R D
Sbjct: 71 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 130
Query: 558 PLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCP 617
+ S I++DE HERT +D L +LK QRP L+VI+ SATL+++ FS YF +CP
Sbjct: 131 TALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSCP 190
Query: 618 VIEIPGKTFPVEVLY 632
VI IPG+TFPV+ +
Sbjct: 191 VITIPGRTFPVDQFF 205
>At5g14900 [A] KOG0925 mRNA splicing factor ATP-dependent RNA helicase
Length = 301
Score = 188 bits (478), Expect = 4e-47
Identities = 103/278 (37%), Positives = 167/278 (60%), Gaps = 10/278 (3%)
Query: 808 NLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQF 867
NL +T+L LK + + +L+ F+ +D P + AL++L++L ALD++ LT G+ MS+F
Sbjct: 3 NLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSEF 62
Query: 868 PMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPK-DKQQEADNRKARFHHPYGDH 926
P++P ++K L+ S CS+E+L+I AMLS+ N F RP+ + Q+ AD K+ F H GDH
Sbjct: 63 PLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGDH 122
Query: 927 LTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDVDC 986
LTLLN+F+ + ++N ++C T F++ R +K A+ VR+QL I + + + C D +
Sbjct: 123 LTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL--CSPDFNS 180
Query: 987 ------IRKTLVSGFFRNAAKRESQAGYKTLTD-GTQVAISPGSSLFGKEYDYVLYHSIV 1039
IRK L++G+F A E Y T D QV S+ + ++V+Y+ V
Sbjct: 181 RDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHKPEWVVYNEYV 240
Query: 1040 LTSREYMMQVTAIESKWLLESAPHFYKVADPNGSSRKK 1077
TSR ++ VT I +WL++ APH+YK+A+ S K+
Sbjct: 241 FTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAKR 278
>At2g01130 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1112
Score = 188 bits (478), Expect = 4e-47
Identities = 127/421 (30%), Positives = 214/421 (50%), Gaps = 19/421 (4%)
Query: 654 NEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTP 713
NE G +L+FLTG ++I + E L ++ + G +++L + ++ + Q IFE
Sbjct: 494 NEGPGGILIFLTGWDDISSLKEKL--QIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPA 551
Query: 714 KGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKG 773
G RK++ ATNIAETSITI+ V +VID G +K +Y+ LL S IS+ A QR+G
Sbjct: 552 SGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRG 611
Query: 774 RAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNF--EFMD 831
RAGR PG+C+ LY + + + +PEI R L L +K++ + + F +
Sbjct: 612 RAGRVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQ 670
Query: 832 PPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLT 891
P + A+ L + ALDE LTTLG+ +S+ PMEP L K L+ C D +LT
Sbjct: 671 SPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILT 730
Query: 892 IVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSKS---FCTT 948
+ A LS+++ F P+DK+ A+ K++F + DHL L+ + W+++ + +C
Sbjct: 731 VAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWK 790
Query: 949 NFLHERHLKRALDVRQQLFNIFKKMNL-----PIVSCHG-DVDCIRKTLVSGFFR---NA 999
NFL + L+ +R++ F++ K L I + G D + R + G + +
Sbjct: 791 NFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGICSV 850
Query: 1000 AKRESQAGYKTLTDGTQVAISPGSSLFGKE--YDYVLYHSIVLTSREYMMQVTAIESKWL 1057
E KT+ DG + S + + Y +++++ + + ++ TA L
Sbjct: 851 VHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTL 910
Query: 1058 L 1058
+
Sbjct: 911 I 911
Score = 135 bits (340), Expect = 4e-31
Identities = 78/213 (36%), Positives = 120/213 (55%), Gaps = 7/213 (3%)
Query: 423 WERS-RMKERVSYGKRT--SLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKT 479
W+RS ++++R Y + + + + R LP ++ R ++ A+ +NQ +VI GETG GKT
Sbjct: 190 WQRSLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKT 249
Query: 480 TQLTQY-LDEEGLSNKGMIG---CTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDE 535
TQ+ Q+ L+ E +N+G CTQP E G +GE VGY +R E
Sbjct: 250 TQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGV 309
Query: 536 TSSRTRIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDL 595
TR+ + T G++ R L+D + + +++DE HER + D L +LK +R +L
Sbjct: 310 KGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSEL 369
Query: 596 KVIITSATLDSDKFSKYFMNCPVIEIPGKTFPV 628
K+I+ SATLD++ FS YF VI IPG T+PV
Sbjct: 370 KLILMSATLDAELFSSYFGGAGVIYIPGFTYPV 402
>YMR128w [AJ] KOG0926 DEAH-box RNA helicase
Length = 1267
Score = 185 bits (469), Expect = 4e-46
Identities = 102/235 (43%), Positives = 146/235 (61%), Gaps = 4/235 (1%)
Query: 668 EEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAE 727
EE + E+L E A D L +LP+YS LP++ Q R+F+ P+GSR I ATN+AE
Sbjct: 710 EEEEGFEEVLTEGQTAND----PLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAE 765
Query: 728 TSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLY 787
TS+TI GV YV+D G SK YN G++ V +S+A ANQR GRAGRTGPG C+RLY
Sbjct: 766 TSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLY 825
Query: 788 TESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFN 847
+ + F+++ + PEI R +E +L +K+M I++++NF F PP + + A++ L
Sbjct: 826 SSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQY 885
Query: 848 LQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVF 902
L ALD + +T GK+MS FP+ P SK LL S C ++ IV+ LS+ + F
Sbjct: 886 LGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPF 940
Score = 160 bits (404), Expect = 1e-38
Identities = 90/250 (36%), Positives = 143/250 (57%), Gaps = 22/250 (8%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNK------G 495
I++ R +LPV+ ++++A+ N ++I GETGSGKTTQ+ Q+L E G + G
Sbjct: 384 IQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPG 443
Query: 496 MIGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREAL 555
M+G TQP E+G + G +VGY IRF+ T++K++TDG++ RE +
Sbjct: 444 MVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM 502
Query: 556 LDPLMSRYSVILLDEAHERTVATDVLFALL-----------KKAALQRPDLKVIITSATL 604
D +++YS I++DEAHER + TD+L +L K+ ++ LK+II SATL
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL 562
Query: 605 DSDKFSK----YFMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDV 660
FS+ + + PV+++ + FPV + ++ + +Y + A T IH P G +
Sbjct: 563 RVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAI 622
Query: 661 LVFLTGQEEI 670
LVFLTGQ+EI
Sbjct: 623 LVFLTGQQEI 632
>At1g58060 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1453
Score = 182 bits (463), Expect = 2e-45
Identities = 123/360 (34%), Positives = 182/360 (50%), Gaps = 25/360 (6%)
Query: 639 DYIESALDTTMDIHINEP--QGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPV 696
D I+ L + HI++ +G +L+FL G EI ++L + L LP+
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL--LPL 952
Query: 697 YSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGME 756
+S++ S Q ++F PKG RKVI ATNIAETSITID V YVID G K N YNP+ +
Sbjct: 953 HSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLS 1012
Query: 757 QLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILML 816
++ ISQA A QR GRAGR PG CF LYT F+ M P VPE+ R L L +
Sbjct: 1013 SMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQI 1072
Query: 817 KAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLS 874
K +G+ + F ++PP + M SA+ L + A++ + LT LG +++ P++ +
Sbjct: 1073 KLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIG 1132
Query: 875 KTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYG---------- 924
K LL C +L+I A LS ++ F PKD++Q D K G
Sbjct: 1133 KMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNND 1192
Query: 925 ---DHLTLLNVFNRW------RESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKMNL 975
DHL ++ +++W R ++ FC + FL ++ D+R Q + + L
Sbjct: 1193 RQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGL 1252
Score = 108 bits (271), Expect = 4e-23
Identities = 75/235 (31%), Positives = 116/235 (48%), Gaps = 21/235 (8%)
Query: 446 RERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEE----GLSNKGMIGCTQ 501
R LP+ ++ ++ + + LV+ GETGSGKTTQ+ Q++ ++ G I CTQ
Sbjct: 611 RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 670
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEE-----VGYTIRFEDETSSRTRIKYLTDGMMQREALL 556
P +E C VGY +R E S +TR+ + T G++ R+
Sbjct: 671 PRRIAAISVAQRVADER-CESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAG 729
Query: 557 DPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRP------DLKVIITSATLDSDKFS 610
D ++ + I++DE HER++ D L +LK ++ LKVI+ SAT+D+D FS
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFS 789
Query: 611 KYFMNCPVIEIPGKTFPV-----EVLYSSKPQMDYIESALDTTMDIHINEPQGDV 660
+YF +CPVI G+T PV E +Y S + +S D I + G V
Sbjct: 790 RYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSV 844
>At4g18470_2 [A] KOG0922 DEAH-box RNA helicase
Length = 547
Score = 174 bits (442), Expect = 5e-43
Identities = 90/183 (49%), Positives = 128/183 (69%), Gaps = 11/183 (6%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG-MIGCT 500
I++QR+RLPVY+ R +++ V + +IVGETGSGKTTQ+ QYL E G + G +I CT
Sbjct: 7 IEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACT 66
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSR-TRIKYLTDGMMQREALLDPL 559
QP EEMG N+GEEVGYTIRFED T+S T +K+LTDG++ RE + DPL
Sbjct: 67 QPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPL 126
Query: 560 MSRYSVILLDEAHERTVATDVLFALLKKAA---------LQRPDLKVIITSATLDSDKFS 610
+++YSVI++DEAHER+++TD+L LLKK + +RP+L++II+SAT+++ S
Sbjct: 127 LTKYSVIMIDEAHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIISSATIEAKTMS 186
Query: 611 KYF 613
+F
Sbjct: 187 NFF 189
Score = 73.9 bits (180), Expect = 1e-12
Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 816 LKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTT-LGKRMSQFPMEPGLS 874
LKA+GI+++L F++ PP M+ ALE L++LQ LD++ LT+ G ++++ P++P +S
Sbjct: 254 LKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMIS 313
Query: 875 KTLLASVTNKCSDEMLTIVAMLSIQ 899
K +LAS CS E++TI A+LS+Q
Sbjct: 314 KMILASSELGCSHEIITIAAVLSVQ 338
Score = 57.4 bits (137), Expect = 1e-07
Identities = 27/72 (37%), Positives = 44/72 (60%), Gaps = 2/72 (2%)
Query: 957 KRALDVRQQLFNIFKKMNLPIVSCHGDVDCIRKTLVSGFFRNAAKRE--SQAGYKTLTDG 1014
K+ +++R QL I +++ + + SC GD++ +RK + +GFF NA + E S YKT+
Sbjct: 416 KKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGS 475
Query: 1015 TQVAISPGSSLF 1026
+V I P S LF
Sbjct: 476 EEVYIHPSSVLF 487
>7292962 [A] KOG0924 mRNA splicing factor ATP-dependent RNA helicase
Length = 676
Score = 172 bits (437), Expect = 2e-42
Identities = 83/147 (56%), Positives = 108/147 (73%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
I EQR LPV+ RQ+L++ + +N ++IVGETGSGKTTQLTQYL E+G S +GMIGCTQ
Sbjct: 527 ISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQ 586
Query: 502 PXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLMS 561
P +EM +GE+VGY IRFED TS RT IKY+TDG++ RE+L DP +
Sbjct: 587 PRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELD 646
Query: 562 RYSVILLDEAHERTVATDVLFALLKKA 588
YS I++DEAHER+++TDVLF LL++A
Sbjct: 647 SYSAIIMDEAHERSLSTDVLFGLLREA 673
>7290296 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1192
Score = 169 bits (427), Expect = 3e-41
Identities = 94/239 (39%), Positives = 143/239 (59%), Gaps = 11/239 (4%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCTQ 501
++ R RLP+ QQ+++ + +N +++ GETGSGKTTQL Q+L E G + MIG T+
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTE 312
Query: 502 PXXXXXXXXXXXXXEEMGCNVGE-EVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLM 560
P EM N+ E EV Y IRFE + TRIK++TDG++ +E D L+
Sbjct: 313 PRRVAAIAMSKRVAHEM--NLPESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLL 370
Query: 561 SRYSVILLDEAHERTVATDVLFALLKKAALQR----PDLKVIITSATLDSDKFSK----Y 612
S+YSVI+LDEAHER+V TD+L LL + R LK+II SATL F++ +
Sbjct: 371 SKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTENTRLF 430
Query: 613 FMNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEID 671
+ P++++ + FPV + + + DY+ A T+ IH P+G +L+F+TGQ+E++
Sbjct: 431 KIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVN 489
Score = 149 bits (377), Expect = 2e-35
Identities = 135/482 (28%), Positives = 211/482 (43%), Gaps = 68/482 (14%)
Query: 639 DYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKAL-DGTIPELIILPVY 697
DY DT D+H + D G EE D E+ E + G L +LP+Y
Sbjct: 568 DYKLPGDDTEADMHEQPDEDDEQ---EGLEE-DNDDELGLEDESGMGSGQRQPLWVLPLY 623
Query: 698 SALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQ 757
S L SE Q+RIF P P G R + +TN+AETS+TI + YV+D G K Y+ G+
Sbjct: 624 SLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSA 683
Query: 758 LLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLK 817
+V+ S+A A+QR GRAGR G C+RLY+ + + + + P+IQ++ +E +L ++
Sbjct: 684 FVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMR 743
Query: 818 AMGINDLLNFEFMDPPPKSFMVSALEELFNLQAL--------DEEGFLTTLGKRMSQFPM 869
MGI+ +++F F PP + + +A L L AL D +T LG +S+FP+
Sbjct: 744 CMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPV 803
Query: 870 EPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRP-KDKQQEADNRKARFHHP------ 922
P K L S + +VA LS+Q V + ++ RFH
Sbjct: 804 APRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPGANRFHRKRQSWAA 863
Query: 923 ------YGDHLTLLNVFNRWRESNYSKS------FCTTNFLHERHLKRALDVRQQLFNIF 970
GD + LL + Y+ S FC N L ++ + +R QL N
Sbjct: 864 SGNYQLLGDPMVLLRAVG---AAEYAGSQGRLPEFCAANGLRQKAMSEVRKLRVQLTN-- 918
Query: 971 KKMNLPIVSCHGDVD------------CIRKTLVSGFFRNAA-------------KRESQ 1005
++NL + VD +R+ L++G A +R +
Sbjct: 919 -EINLNVSDVELGVDPELKPPTDAQARFLRQILLAGMGDRVARKVPLADIADKEERRRLK 977
Query: 1006 AGYKTLTDGTQVAISPGSSLFGKEYDYVLYHSIVL-----TSREYMMQVTAIESKWLLES 1060
Y + S L K ++V+Y +++ ++ +TAIE +WLL
Sbjct: 978 YAYNCADMEEPAFLHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLY 1037
Query: 1061 AP 1062
P
Sbjct: 1038 VP 1039
>At1g06670 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1576
Score = 164 bits (415), Expect = 7e-40
Identities = 112/323 (34%), Positives = 170/323 (51%), Gaps = 20/323 (6%)
Query: 658 GDVLVFLTGQEEIDTCCE-ILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGS 716
G +LVFL G EEI E +L +R A + IIL ++S +P+E Q ++F P+G
Sbjct: 576 GAILVFLPGWEEISKTKEKLLDDRFFAHSA---KFIILCLHSRVPAEEQKKVFNRPPRGC 632
Query: 717 RKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAG 776
RK++ ATNIAE+++TID V YVID G K +Y+P + L S +S+A A QR GRAG
Sbjct: 633 RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAG 692
Query: 777 RTGPGKCFRLYTESAFKNEMLPN-TVPEIQRQNLEHTILMLKAM----GINDLLNFEFMD 831
R G C+ LY S + LP VPE+ R ++ L +K + +ND L + MD
Sbjct: 693 RCQAGICYHLY--SKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQ-KLMD 749
Query: 832 PPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLT 891
PP + +AL L ++ AL E LT LG++ Q P+ P +SK + ++ C D L
Sbjct: 750 PPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALI 809
Query: 892 IVAMLSIQNVFYRP-----KDKQQEADNRKARFHHPYGDHLTLLNVFNRWRE---SNYSK 943
+ ++ F P + K A + A + + DHL + F W+ S +K
Sbjct: 810 LACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAK 869
Query: 944 SFCTTNFLHERHLKRALDVRQQL 966
FC+ F+ + +KR D+ ++L
Sbjct: 870 EFCSKYFISQVVMKRLDDLCRKL 892
Score = 128 bits (321), Expect = 6e-29
Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 11/218 (5%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG---MIG 498
I E R +LP+ R +I AV NQ ++I GETG GKTTQ+ QYL + +K I
Sbjct: 210 IFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKII 269
Query: 499 CTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREAL--- 555
CTQP E G +G VGY +R + E + + + T+G++ R +
Sbjct: 270 CTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKG 329
Query: 556 LDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMN 615
++ + + I++DE HER +D + +L+ P L++I+ SATLD+++FS+YF
Sbjct: 330 VNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGG 389
Query: 616 CPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHI 653
CPV+ +PG T+PV + +D S L++ + H+
Sbjct: 390 CPVVRVPGFTYPVRTFF-----LDDALSVLNSDKNSHL 422
>At2g47680 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1015
Score = 162 bits (411), Expect = 2e-39
Identities = 157/569 (27%), Positives = 252/569 (43%), Gaps = 82/569 (14%)
Query: 439 SLPIKEQR-ERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMI 497
SLP+ LP+ M++++ID +++N+ +IVGE G GK++Q+ Q+L E +N I
Sbjct: 15 SLPLPSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLE---ANMAPI 71
Query: 498 GCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLD 557
CTQP + ++G E+GY I + ++I + T G++ E L
Sbjct: 72 LCTQPRRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEMLDK 131
Query: 558 PLMS-RYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFM-- 614
L + +Y VI+LDE HER+V +D++ +K+ ++ DL+V++ SAT D ++ YF
Sbjct: 132 GLNALKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKEL 191
Query: 615 ----NCPVIEIPG----KTFPVEVLYSSKPQMDYIESALDTTMDIHINEP-----QGDVL 661
V+ IP F VLY ++ + L + D+ P D
Sbjct: 192 GRGERVEVVAIPSPDQRTIFQRRVLY-----LEQVAGLLGVSSDLSAYCPGPSPSSADTE 246
Query: 662 VFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEP---------- 711
+ Q I ++E+ ++ +I L+ LP Y +L E Q EP
Sbjct: 247 IKPELQNLIHDLILYIHEKEPDIEKSI--LVFLPTYYSL--EQQYHQLEPFFASFEVHIL 302
Query: 712 --------------TPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQ 757
+ RKVI ATNIAE+S+TI V YVID S ++P +
Sbjct: 303 HRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDA 362
Query: 758 LLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILML- 816
+ + +S++QA QR+GR GRT G+ +RL SAF N++ + P I + +L +L +
Sbjct: 363 VQLVWVSRSQAEQRRGRTGRTCDGEVYRL-VPSAFFNKLEEHEPPSILKLSLRQQVLHIC 421
Query: 817 --KAMGIND--LLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPG 872
++ IND L + MDPP + AL L ++QAL ++ + EP
Sbjct: 422 CTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQAL----------RKSPRGRYEPT 471
Query: 873 LSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNV 932
LLAS S + +V + + D HHP+GD L
Sbjct: 472 FYGRLLASF--PLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFLEY 529
Query: 933 FNRW-----------RESNYSKSFCTTNF 950
+ + RE +FC F
Sbjct: 530 VDHYFGGSKTISGGRREMVLMANFCAFQF 558
>Hs7661934 [A] KOG0922 DEAH-box RNA helicase
Length = 576
Score = 159 bits (403), Expect = 2e-38
Identities = 86/204 (42%), Positives = 125/204 (61%), Gaps = 1/204 (0%)
Query: 708 IFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQ 767
+F+ P G RK I +TNIAETS+TIDG+ +V+D G K +Y+P+ +++L ISQA
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 768 ANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNF 827
A QRKGRAGRTGPG CFRLY ES + + P VPEI+R L+ +L +K+M + D F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 828 EFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSD 887
F++PPP + + +A+ L + ALD LT +G ++Q P++ + K L+ +
Sbjct: 459 PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVE 518
Query: 888 EMLTIVAMLSIQNVFYRPKDKQQE 911
+LTI A LS+Q+ F R E
Sbjct: 519 PVLTIAAALSVQSPFTRSAQSSPE 542
Score = 144 bits (362), Expect = 1e-33
Identities = 75/196 (38%), Positives = 116/196 (58%), Gaps = 5/196 (2%)
Query: 443 KEQRER--LPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKGMIGCT 500
K QRER LP+ + +++ + ++Q +V+ G+TG GK+TQ+ QYL G S+ + CT
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACT 210
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDPLM 560
QP E G +VGY IRFE S+ T+I +LT G++ R+ +P +
Sbjct: 211 QPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSL 270
Query: 561 SRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVIE 620
+Y V+++DE HER + D L +L++ RPDLKVI+ SAT++ FS YF N PV++
Sbjct: 271 PQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINISLFSSYFSNAPVVQ 330
Query: 621 IPGKTFPVEVLYSSKP 636
+PG+ FP+ V + P
Sbjct: 331 VPGRLFPITVFDVAPP 346
>CE29563 [AJ] KOG0926 DEAH-box RNA helicase
Length = 1148
Score = 159 bits (403), Expect = 2e-38
Identities = 138/488 (28%), Positives = 221/488 (45%), Gaps = 48/488 (9%)
Query: 624 KTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERVKA 683
K+ +E P+ + E D MD +G F +E + ++ +V+
Sbjct: 504 KSIKLEDFKEETPETEDFEDVDDGLMDGDDMNERGAAEAFDDYEEFENGDGDLSDGKVEN 563
Query: 684 LDGTIPE----LIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVI 739
G P L LP+YS L Q R+F+ TP G R + +TN+AETS+TI GV YVI
Sbjct: 564 SIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVI 623
Query: 740 DPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPN 799
D GF K Y+ G+ + V ISQA +QR GRAGR G +RLY+ SA + +
Sbjct: 624 DGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYS-SAVYQDFVKF 682
Query: 800 TVPEIQRQNLEHTILMLKAMGINDLLNFEFMDPPPKSFMVSALEELFNLQALDE------ 853
PEI + + +L LK+M I ++NF F P + + SA + L L AL E
Sbjct: 683 ADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGK 742
Query: 854 -EGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFY--------R 904
E +T LGK ++ FP+ P +K + + + + ++++LS++
Sbjct: 743 TEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDT 802
Query: 905 PKDKQQEADN----RKARFHHP----YGDHLTLLNVFNRWRESNYSKSFCTTNFLHERHL 956
P++ ++ N R+ H GD L++ + + Y+ C L + L
Sbjct: 803 PEETKELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKAL 862
Query: 957 KRALDVRQQLFNIF----KKMNLPIVS------CHGDVDCIRKTLVSGFFRNAAKR---- 1002
A +RQQL NI KK + + +R+ +V+ F A+R
Sbjct: 863 VEARKLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARRVDRS 922
Query: 1003 ----ESQAG-YKTLTDGTQVAISPGSSLFGKEYDYVLYHSIV-LTSREYMMQVTAIESKW 1056
E Q G Y+T V I P S +F +E ++V+Y +V + ++ M V A++ +W
Sbjct: 923 VGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEW 982
Query: 1057 LLESAPHF 1064
L A +
Sbjct: 983 LSRLAESY 990
Score = 154 bits (389), Expect = 7e-37
Identities = 91/241 (37%), Positives = 139/241 (56%), Gaps = 11/241 (4%)
Query: 439 SLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG-MI 497
S I++ R LP++ ++++A+ +N V+ GETGSGKTTQ+ Q+L E G +++G +I
Sbjct: 226 SKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELI 285
Query: 498 GCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLD 557
G T+P E+ +EV Y IR+E S T I ++TDG++ +E D
Sbjct: 286 GITEPRRVAAIAMAQRVGVELA--KPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQD 343
Query: 558 PLMSRYSVILLDEAHERTVATDVLFALLKKAALQRP----DLKVIITSATLDSDKFS--K 611
++ +YSVIL+DEAHER++ +DVL +L + R L+++I SATL D F+ K
Sbjct: 344 VMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKK 403
Query: 612 YF--MNCPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEE 669
F + VI++ + FPV V + + DYI SA T IH P G +LVF+TGQ E
Sbjct: 404 LFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQHE 463
Query: 670 I 670
+
Sbjct: 464 V 464
>At2g30800 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1299
Score = 157 bits (398), Expect = 7e-38
Identities = 117/358 (32%), Positives = 178/358 (49%), Gaps = 24/358 (6%)
Query: 658 GDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSR 717
G +LVFL G ++I+ + L E D ++I L +S +P+ Q ++F P G R
Sbjct: 552 GAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICL--HSMVPAGEQKKVFNRPPPGCR 609
Query: 718 KVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGR 777
K++ ATNIAE+++TID V YVID G K +Y+P + L S +S+A A QR+GRAGR
Sbjct: 610 KIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGR 669
Query: 778 TGPGKCFRLYTESAFKNEMLPN-TVPEIQRQNLEHTILMLKAMG----INDLLNFEFMDP 832
PG C+ LY S + +P+ VPEI+R +E L +K + ND L + +DP
Sbjct: 670 CQPGICYHLY--SRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQ-KLLDP 726
Query: 833 PPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTI 892
P + +AL L ++ AL + LT LG++ P+ P +SK L +V C D LT+
Sbjct: 727 PVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTL 786
Query: 893 VAMLSIQNVFYRPKD--KQQEADNRKARFHHPYG---DHLTLLNVFNRWRES---NYSKS 944
+ F P ++Q+A K G DHL ++ F W+ + S
Sbjct: 787 ACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKGRGLSAE 846
Query: 945 FCTTNFLHERHLKRALDVRQQLFNIFKKMNL---PIVSC---HGDVDCIRKTLVSGFF 996
FC+ F+ +K +R QL + K+ + I SC D +R L G +
Sbjct: 847 FCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGILRAVLAVGLY 904
Score = 129 bits (324), Expect = 3e-29
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 11/219 (5%)
Query: 442 IKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSNKG---MIG 498
I + R +LP+ + + AV NQ ++I GETG GKTTQ+ QYL + S+K I
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 499 CTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREALLDP 558
CTQP E G ++GE +GY +R + + + + + T+G++ R +
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG 299
Query: 559 LMSRYSVI---LLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMN 615
+S S I ++DE HER +D + A+++ P L++I+ SATLD+++FS YF
Sbjct: 300 SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGG 359
Query: 616 CPVIEIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHIN 654
CPV+ +PG T+PV LY ++ + S L + D H++
Sbjct: 360 CPVVRVPGFTYPVRTLY-----LEDVLSILKSGGDNHLS 393
>Hs18559453 [A] KOG0920 ATP-dependent RNA helicase A
Length = 965
Score = 154 bits (390), Expect = 6e-37
Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 13/324 (4%)
Query: 657 QGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGS 716
+G VL+FL G I ++L + ++ ++S L ++ Q+ F P G
Sbjct: 463 EGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK---VIALHSILSTQDQAAAFTLPPPGV 519
Query: 717 RKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAG 776
RK++ ATNIAET ITI V +VID G +K N Y+ M L+ + +S+A A QR+GRAG
Sbjct: 520 RKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAG 579
Query: 777 RTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPP 834
R G CFR+YT F+ + +VPEI R LE L + + +F + +DPP
Sbjct: 580 RVRDGFCFRMYTRERFEG-FMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQ 638
Query: 835 KSFMVSALEELFNLQALD-EEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIV 893
+ +A+ L + A + E LT LG+ ++ P+ + K L+ C D + T+
Sbjct: 639 LQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 698
Query: 894 AMLSIQNVFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWR----ESNYSK--SFCT 947
A+++ ++ F P ++ EAD K+ DHLT+ N + W+ E Y ++C
Sbjct: 699 AVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLGWKKARQEGGYRSEITYCR 758
Query: 948 TNFLHERHLKRALDVRQQLFNIFK 971
NFL+ L DV+Q+L + K
Sbjct: 759 RNFLNRTSLLTLEDVKQELIKLVK 782
Score = 152 bits (383), Expect = 4e-36
Identities = 89/255 (34%), Positives = 143/255 (55%), Gaps = 17/255 (6%)
Query: 394 NKSKQLADPSSS--KVLSNSEFDARQLVATAWERSRMKERVSYGKRTSLP----IKEQRE 447
NK + DP S ++S+ +F A L + E + + K S P + ++R+
Sbjct: 108 NKRENSEDPEESWENLVSDEDFSALSLESANVEDLEPVRNL-FRKLQSTPKYQKLLKERQ 166
Query: 448 RLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQYLDEEGLSN-----KGMIGCTQP 502
+LPV++ R +++ + +++ +V+ GETGSGK+TQ+ +L E+ L N K I CTQP
Sbjct: 167 QLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQP 226
Query: 503 XXXXXXXXXXXXXEEMGCNVGEE-----VGYTIRFEDETSSRTRIKYLTDGMMQREALLD 557
+E+GC G GY IR E TR+ Y T G++ R+ D
Sbjct: 227 RRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQED 286
Query: 558 PLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCP 617
L+S S +++DE HER+V +D L +LK+ +R DL +I+ SAT+DS+KFS YF +CP
Sbjct: 287 GLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 346
Query: 618 VIEIPGKTFPVEVLY 632
++ I G+++PVEV +
Sbjct: 347 ILRISGRSYPVEVFH 361
>7300065 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1434
Score = 154 bits (390), Expect = 6e-37
Identities = 144/544 (26%), Positives = 241/544 (43%), Gaps = 56/544 (10%)
Query: 424 ERSRMKERVSYGKRTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLT 483
E + ++ Y K+ + + L +Y R++++ A+ + ++I GETG GKTTQ+
Sbjct: 91 EETEIRRDDEYYKKFRFNLNRDKN-LSIYAKREEILAAINAHPVVIIKGETGCGKTTQVP 149
Query: 484 QY-LDEEGLSNKGM-IGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSR-T 540
QY LDE S K I TQP +E + + S T
Sbjct: 150 QYILDEAYKSGKYCNIVVTQPRRIAAISIANRVCQEREWQQNTVCSFQVGLHRPNSLEDT 209
Query: 541 RIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLFALLKKA-ALQRPDLKVII 599
R+ Y T G++ + + ++ Y+ I+LDE HER D L ++++ A +K+I+
Sbjct: 210 RLLYCTTGVLLNNLINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRHVKIIL 269
Query: 600 TSATLDSDKFSKYFMNC----PVIEIPGKT-FPVEVLYSSK----------------PQM 638
SAT+D+ + S YF PVI + +E Y + P++
Sbjct: 270 MSATIDAKELSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQLGSIIWNEEDVGHQQVPEI 329
Query: 639 ---------------DYIE--SALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYERV 681
D +E +A+ + G VL+FL G EIDT E L +
Sbjct: 330 NKHGYRAAVKIIVIIDNMERKAAIQSRQSYDEALRYGAVLIFLPGIYEIDTMAENLTCML 389
Query: 682 KALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDP 741
+ D I ++ I+ +S + E Q +F P P G RK+I TNIAE+SIT+ V YVID
Sbjct: 390 EN-DPNI-KVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYVIDF 447
Query: 742 GFSKINTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTV 801
+K+ + L ++ S+A QR GR GR G+ +R+ + ++ EM +
Sbjct: 448 CLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGI 507
Query: 802 PEIQRQNLEHTILMLKAMGINDLLNF--EFMDPPPKSFMVSALEELFNLQAL-------- 851
PE+ R L++++L K + + + + PP S + + + L + AL
Sbjct: 508 PEMLRLPLQNSVLKAKVLNMGSPVEILALALSPPNLSDIHNTILLLKEVGALYLTVDGIY 567
Query: 852 -DEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQ 910
+G LT G MS+ P++ S+ ++ +E + I A LS +F + Q
Sbjct: 568 DPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQ 627
Query: 911 EADN 914
D+
Sbjct: 628 LGDS 631
>CE05718 [A] KOG0920 ATP-dependent RNA helicase A
Length = 1425
Score = 151 bits (382), Expect = 5e-36
Identities = 117/394 (29%), Positives = 188/394 (47%), Gaps = 52/394 (13%)
Query: 633 SSKPQMDYIESALDTTMDIHINEPQ-GDVLVFLTGQEEIDTCCEILYERVKALD------ 685
SS +DY+ LD + + P G +LVFL G E+I + +KA+D
Sbjct: 621 SSNNSVDYV--LLDQVIQYLADSPVFGTILVFLPGYEDIQ-------QMLKAIDCWKNSL 671
Query: 686 GTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSK 745
+ +I+LP++S + S IF+ PK +RK+I ATNIAE SITI+ V +V+D G K
Sbjct: 672 KNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVK 731
Query: 746 INTYNPRVGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQ 805
+++ + L V PI+++ A+QR GRAGR G C RLYTE + N M + E++
Sbjct: 732 EKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEY-NSMPETQIAEMK 790
Query: 806 RQNLEHTILMLKAMGINDLLNFEFM----DPPPKSFMVSALEELFNLQAL---------- 851
R + L K L EF+ +PP K ++ A+ L + A
Sbjct: 791 RAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYTPIKIYDNS 850
Query: 852 -DEEGF----------------LTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVA 894
+EEG LT LG+ M++ P++P LS+ LL + KC ++ +VA
Sbjct: 851 GNEEGLKNDEEAENSENPEDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVA 910
Query: 895 MLSIQN--VFYRPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRESNYSK--SFCTTNF 950
+L+ + V +D+ ++ + DHL + + N + N S+ FC +F
Sbjct: 911 LLASREPYVLALSEDRDLQSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHF 970
Query: 951 LHERHLKRALDVRQQLFNIFKKMNLPIVSCHGDV 984
L+ ++ R+QL + L +S + DV
Sbjct: 971 LNFSTMRMVQGTRRQLLRELVRAKLINISPNRDV 1004
Score = 114 bits (285), Expect = 9e-25
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Query: 437 RTSLPIKEQRERLPVYRMRQQLIDAVIKNQFLVIVGETGSGKTTQLTQY-LDEEGLSNKG 495
+ S +++ R LP + Q++ ++ ++I G TG GKTTQ+ Q+ LDE +NK
Sbjct: 169 KCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKH 228
Query: 496 M-IGCTQPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSSRTRIKYLTDGMMQREA 554
+ + TQP E G +G VGY +R + S T + Y T G++ R
Sbjct: 229 VRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRML 288
Query: 555 LLDPLMSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDK--FSKY 612
DP+ S + I++DE HER + TD L L++ RPDLKVI+ SAT++ + FS Y
Sbjct: 289 TSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFSNY 348
Query: 613 FMN--CPVIEIPGKTFPVEVLY 632
F N VI I + F V+V Y
Sbjct: 349 FENHSMDVIRIESRAFDVKVFY 370
>CE18218 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 1402
Score = 134 bits (337), Expect = 8e-31
Identities = 103/331 (31%), Positives = 157/331 (47%), Gaps = 13/331 (3%)
Query: 650 DIHINEPQGDVLVFLTGQEEIDTCCEILYERVKALDGTIPELIILPVYSALPSEIQSRIF 709
DI G VLVFL G EI T C L E + G + ILP++S L S+ Q ++F
Sbjct: 753 DIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEF--GQANKYEILPLHSQLTSQEQRKVF 810
Query: 710 EPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPISQAQAN 769
P G RK+I +TNIAETSITID V YVID +K Y M S+
Sbjct: 811 NHYP-GKRKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVI 869
Query: 770 QRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLKAMGINDLLNF-- 827
QR+GRAGR G F L ++ F+ + + E+ R L L +K + + + F
Sbjct: 870 QRRGRAGRVRAGYAFHLCSKMRFE-ALDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLG 928
Query: 828 EFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSD 887
+ + PPP +V + L + ALD LT+LGK +++ P+EP ++K L+
Sbjct: 929 KALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGS 988
Query: 888 EMLTIVAMLSIQNVFY-RPKDKQQEADNRKARFHHPYGDHLTLLNVFNRWRE------SN 940
M + + +S F R K + + ++ + + DH+ +++V +RE S
Sbjct: 989 VMCDVASAMSFPTPFVPREKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASA 1048
Query: 941 YSKSFCTTNFLHERHLKRALDVRQQLFNIFK 971
+ FC L LK R+QL ++ +
Sbjct: 1049 AEREFCERYSLSNPVLKMTDGARRQLIDVLR 1079
Score = 111 bits (277), Expect = 7e-24
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 16/236 (6%)
Query: 411 SEFDARQLVATAWER--SRMKERVSYGKRTSLP-IKEQRERLPVYRMRQQLIDAVIKNQF 467
S D L + E+ R+ E+ + + +L I QR LPV + R+ ++ V +N+
Sbjct: 441 SNIDEEPLAFMSMEQISQRIMEKEDFKRGEALDKITAQRGELPVAQYRENIVQTVAENRV 500
Query: 468 LVIVGETGSGKTTQLTQYLDEEGLSNKGMIG----CTQPXXXXXXXXXXXXXEEMGCNVG 523
+I GETG GK+TQ+ Q+L E L N +QP E G VG
Sbjct: 501 TLIKGETGCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVG 560
Query: 524 EEVGYTIRFEDETSSRT-RIKYLTDGMMQREALLDPLMSRYSVILLDEAHERTVATDVLF 582
E GY +RF+ T I + T G++ R +++ + S +++DE HER V TD +
Sbjct: 561 ETCGYNVRFDSATPRPYGSIMFCTVGVLLR--MMENGLRGISHVIIDEIHERDVDTDFVL 618
Query: 583 ALLKKAALQRPDLKVIITSATLDSDKFSKYFMN------CPVIEIPGKTFPVEVLY 632
+L++ DL+V++ SAT+D+D F+ +F + PVI + G+TFPV+ Y
Sbjct: 619 IVLREMISTYRDLRVVLMSATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFY 674
>HsM13375825 [A] KOG0922 DEAH-box RNA helicase
Length = 294
Score = 97.8 bits (242), Expect = 8e-20
Identities = 66/231 (28%), Positives = 121/231 (51%), Gaps = 15/231 (6%)
Query: 864 MSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDK--QQEADNRKARFHH 921
M +FP+ P L+ ++ + + C D +L I AMLS++NVF RP D Q+EA+ R
Sbjct: 1 MVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAA 60
Query: 922 PYG---DHLTLLNVFNRWRESNYSKSFCTTNFLHERHLKRALDVRQQLFNIFKKM----N 974
G D TL +F + + S S+C +++H R L A V QL + +K+ +
Sbjct: 61 KAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSD 120
Query: 975 LPIVSCHGDV-DCIRKTLVSGFFRNAAKRESQAGYKTLTD-GTQVAISPGSSLFGKE--Y 1030
P + G + +R+ L +G+F+N A+R + T+ G+ V I P S+L +E
Sbjct: 121 FPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKL 180
Query: 1031 DYVLYHSIVLTSREYMMQVTAIESKWLLESAP--HFYKVADPNGSSRKKAK 1079
+++++H +++T++ Y V I +W+ + P H + D + +R++ +
Sbjct: 181 EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVR 231
>Hs12383070_1 [A] KOG0920 ATP-dependent RNA helicase A
Length = 529
Score = 85.5 bits (210), Expect = 4e-16
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 20/255 (7%)
Query: 796 MLPNTVPEIQRQNLEHTILMLKAMGINDLLNFEFM----DPPPKSFMVSALEELFNLQAL 851
ML PE+ R L+ L K + + +F+ +PPP + +A++ L + A+
Sbjct: 1 MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAM 60
Query: 852 DEEGFLTTLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQE 911
D LT LG ++ P+EP L K +L +V KC D +LT+ L+ ++ F P Q+
Sbjct: 61 DTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTVACTLAYRDPFVLPTQASQK 120
Query: 912 ADN---RKARFHHPYGDHLTLLNVFNRW---RESNYSKSFCTTNFLHERHLKRALDVRQQ 965
RK + DH+ LL F W R + ++FC NFL + ++ + +R Q
Sbjct: 121 RAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQ 180
Query: 966 LFNIFKKMNLPIVSCHGDV----------DCIRKTLVSGFFRNAAKRESQAGYKTLTDGT 1015
L + GD+ ++ LV+G + N + + T
Sbjct: 181 LLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVSTGPKEK 240
Query: 1016 QVAISPGSSLFGKEY 1030
+V P S L +Y
Sbjct: 241 KVRFHPASVLSQPQY 255
>Hs22052719 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 688
Score = 80.9 bits (198), Expect = 1e-14
Identities = 59/187 (31%), Positives = 90/187 (47%), Gaps = 6/187 (3%)
Query: 705 QSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGFSKINTYNPRVGMEQLLVSPIS 764
Q ++F+P P G KVI +TNIAETSI I+ V YV+D K+ + M S
Sbjct: 299 QRKVFDPVPVGVTKVILSTNIAETSIIINDV-YVVDSCKQKVKLFATHNNMTNYATVWGS 357
Query: 765 QAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTILMLK---AMGI 821
+ Q KG+ GR PG CF L + + F+ + + PE+ + L L +K +GI
Sbjct: 358 KTNLEQWKGQPGRIRPGFCFHLCSRARFE-RLETHMTPEMFQTPLHEVALSIKLPCLVGI 416
Query: 822 NDLLNFEFMDPPPKSFMVSALEELFNLQALDEEGFLTTLGKRMSQFPMEPGLSKTLLASV 881
L + ++ P ++ A L L ALD LT LG+ ++ +EP K ++
Sbjct: 417 GQFL-AKAIETLPLDAVIEAEHTLRELDALDANDDLTPLGRILANLLIEPRFGKMMIMEK 475
Query: 882 TNKCSDE 888
T + E
Sbjct: 476 TKILTTE 482
>Hs22061649 [K] KOG0921 Dosage compensation complex subunit MLE
Length = 324
Score = 63.2 bits (152), Expect = 2e-09
Identities = 64/256 (25%), Positives = 95/256 (37%), Gaps = 63/256 (24%)
Query: 501 QPXXXXXXXXXXXXXEEMGCNVGEEVGYTIRFEDETSS-RTRIKYLTDGMMQREALLDPL 559
QP E G G+ GYT+R E I + T G+
Sbjct: 122 QPRRISAVSVAERVAFERGEETGKSCGYTVRIESVLPRFHASITFCTVGI---------- 171
Query: 560 MSRYSVILLDEAHERTVATDVLFALLKKAALQRPDLKVIITSATLDSDKFSKYFMNCPVI 619
S + + E HER + TD L +L+ P++ +++ SAT+D++
Sbjct: 172 ----SHVTVGEIHERDINTDFLLIVLRDVFQAYPEVHIVLMSATIDTN------------ 215
Query: 620 EIPGKTFPVEVLYSSKPQMDYIESALDTTMDIHINEPQGDVLVFLTGQEEIDTCCEILYE 679
+ L S ++E + T H P D +
Sbjct: 216 --------ITYLTGSSLAEYFLEDCIRMT---HFVPPPKDKK-----------------K 247
Query: 680 RVKALDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVI 739
+ K DG + I P E Q ++ +P P G KVIF+TNIAETSITI+ V YVI
Sbjct: 248 KDKDDDGGEDDYI--------PPEQQRKVLDPVPVGVTKVIFSTNIAETSITINDVVYVI 299
Query: 740 DPGFSKINTYNPRVGM 755
K+ + M
Sbjct: 300 GSCQQKVKLFTAHNNM 315
>7291654 [A] KOG0920 ATP-dependent RNA helicase A
Length = 722
Score = 62.0 bits (149), Expect = 5e-09
Identities = 61/282 (21%), Positives = 120/282 (41%), Gaps = 26/282 (9%)
Query: 684 LDGTIPELIILPVYSALPSEIQSRIFEPTPKGSRKVIFATNIAETSITIDGVYYVIDPGF 743
L G++ E I +Y + ++ + + + + KV+ AT+I E+ Y ID
Sbjct: 35 LTGSLQECSIFLLYDNMRNDYLQALVNASDE-TVKVVLATDIIESLCLKVPFKYQIDTAC 93
Query: 744 SKINTYNPR-VGMEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVP 802
N Y+ + A + G +CFRL ++ A++ E+ + P
Sbjct: 94 RLNNVYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQCFRLISKEAYE-ELSETSQP 152
Query: 803 EIQRQNLEHTILMLKAMGINDLLNFEFM----DPPPKSFMVSALEELFNLQALDEEGFLT 858
+Q L+ L +K + N +++ E++ PPP + A++ L + LD+ +T
Sbjct: 153 SLQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVT 211
Query: 859 TLGKRMSQFPMEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRPKDKQQEADNRKAR 918
LG R+ P+ L + L+ + +C D +LTIV+ LS + P ++ DN R
Sbjct: 212 WLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIP--FTEDIDNLWDR 269
Query: 919 F----------------HHPYGDHLTLLNVFNRWRESNYSKS 944
F + + DH + ++ W+ ++++
Sbjct: 270 FTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRT 311
>Hs17433962 [A] KOG0920 ATP-dependent RNA helicase A
Length = 155
Score = 55.5 bits (132), Expect = 5e-07
Identities = 48/157 (30%), Positives = 76/157 (47%), Gaps = 10/157 (6%)
Query: 755 MEQLLVSPISQAQANQRKGRAGRTGPGKCFRLYTESAFKNEMLPNTVPEIQRQNLEHTIL 814
M L+ + +S+A A Q +GRAG+ G CF YT ++ + +VPEI LE L
Sbjct: 1 MSSLVETFVSKASALQCEGRAGQDRDGFCFWGYTREKYEG-FMDYSVPEILHVPLEK--L 57
Query: 815 MLKAMGIN-----DLLNFEFMDPPPKSFMVSALEELFNLQALD-EEGFLTTLGKRMSQFP 868
L M N D+L F+ +DPP + ++ L A E LT LG+ ++ P
Sbjct: 58 CLHIMRCNHDSPEDIL-FKALDPPQLPVISHSMNFLQKTGACKLNEPQLTPLGQHLAALP 116
Query: 869 MEPGLSKTLLASVTNKCSDEMLTIVAMLSIQNVFYRP 905
+ KTL+ C D + T+ A+++ ++ F P
Sbjct: 117 VYVKTGKTLIFGTVFGCLDPVATLAAVITEKSPFTTP 153
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.133 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,348,460
Number of Sequences: 60738
Number of extensions: 2440364
Number of successful extensions: 7338
Number of sequences better than 1.0e-05: 92
Number of HSP's better than 0.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6800
Number of HSP's gapped (non-prelim): 162
length of query: 1111
length of database: 30,389,216
effective HSP length: 117
effective length of query: 994
effective length of database: 23,282,870
effective search space: 23143172780
effective search space used: 23143172780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)