ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII2974 good O KOG0177 Posttranslational modification, protein turnover, chaperones 20S proteasome, regulatory subunit beta type PSMB2/PRE1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII2974 1024852 1024268 -195
(195 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER012w [O] KOG0177 20S proteasome regulatory subunit beta type ... 328 3e-90
SPAC31A2.04c [O] KOG0177 20S proteasome regulatory subunit beta ... 221 6e-58
Hs4506195 [O] KOG0177 20S proteasome regulatory subunit beta typ... 171 4e-43
7298330 [O] KOG0177 20S proteasome regulatory subunit beta type ... 152 2e-37
At4g14800 [O] KOG0177 20S proteasome regulatory subunit beta typ... 149 2e-36
At3g22630 [O] KOG0177 20S proteasome regulatory subunit beta typ... 147 9e-36
CE13818 [O] KOG0177 20S proteasome regulatory subunit beta type ... 147 1e-35
7295930 [O] KOG0177 20S proteasome regulatory subunit beta type ... 126 2e-29
7295932 [O] KOG0177 20S proteasome regulatory subunit beta type ... 124 8e-29
ECU08g0280 [O] KOG0177 20S proteasome regulatory subunit beta ty... 112 4e-25
SPBC4C3.10c [O] KOG0174 20S proteasome regulatory subunit beta t... 72 6e-13
YJL001w [O] KOG0174 20S proteasome regulatory subunit beta type ... 71 1e-12
At4g31300 [O] KOG0174 20S proteasome regulatory subunit beta typ... 68 9e-12
SPAC22D3.07 [O] KOG0173 20S proteasome regulatory subunit beta t... 62 6e-10
At1g56450 [O] KOG0185 20S proteasome regulatory subunit beta typ... 56 3e-08
7290639 [O] KOG0173 20S proteasome regulatory subunit beta type ... 55 5e-08
YPR103w [O] KOG0175 20S proteasome regulatory subunit beta type ... 54 1e-07
7294336 [O] KOG0173 20S proteasome regulatory subunit beta type ... 54 2e-07
Hs14774499 [O] KOG0174 20S proteasome regulatory subunit beta ty... 53 2e-07
CE05371 [O] KOG0183 20S proteasome regulatory subunit alpha type... 50 2e-06
At5g40580 [O] KOG0173 20S proteasome regulatory subunit beta typ... 50 2e-06
CE19969 [O] KOG0175 20S proteasome regulatory subunit beta type ... 50 3e-06
At3g27430 [O] KOG0173 20S proteasome regulatory subunit beta typ... 50 3e-06
At1g16470 [O] KOG0181 20S proteasome regulatory subunit alpha ty... 50 3e-06
At1g79210 [O] KOG0181 20S proteasome regulatory subunit alpha ty... 49 4e-06
YOR157c [O] KOG0173 20S proteasome regulatory subunit beta type ... 48 7e-06
Hs4758970 [O] KOG0175 20S proteasome regulatory subunit beta typ... 48 7e-06
Hs4506203 [O] KOG0173 20S proteasome regulatory subunit beta typ... 48 7e-06
Hs22056396 [O] KOG0175 20S proteasome regulatory subunit beta ty... 48 7e-06
ECU05g1400 [O] KOG0176 20S proteasome regulatory subunit alpha t... 48 7e-06
>YER012w [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 198
Score = 328 bits (841), Expect = 3e-90
Identities = 162/195 (83%), Positives = 177/195 (90%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
MD++LGIRV+DSVILASSKAVTRGIS+LKDSDDKTRQL PHTLMSF+GEAGDTVQFAEYI
Sbjct: 1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYI 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
QAN+QLY IRE+YELSP A SSFVR ELAKS+RSR+P+QVNVLIGGYD K K ELYQID
Sbjct: 61 QANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQID 120
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
YLGTKVELPY AHGY+GFYTFSLLD HYR D+T +E L LLK CVQELE RMP+DFKGVI
Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVI 180
Query: 181 VKIVDKDGVRVVDDF 195
VKIVDKDG+R VDDF
Sbjct: 181 VKIVDKDGIRQVDDF 195
>SPAC31A2.04c [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 194
Score = 221 bits (562), Expect = 6e-58
Identities = 104/193 (53%), Positives = 140/193 (71%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ LL ++ +D V+ ASS + RGI++LK DDK++ L H LM + GEAGDT FAEYI
Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
AN+ LY +R N LSP A +SF R +LA SLRSRKP+QVN+L+ GY+T K EL+ +D
Sbjct: 61 AANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLD 120
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
YL T V +PYA GY+ FY S+ DR+Y+ DLT+DEA+ ++K C EL+ RMP+DFKG I
Sbjct: 121 YLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFI 180
Query: 181 VKIVDKDGVRVVD 193
K+VDKDG+R ++
Sbjct: 181 CKVVDKDGIREIN 193
>Hs4506195 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 201
Score = 171 bits (434), Expect = 4e-43
Identities = 87/194 (44%), Positives = 128/194 (65%), Gaps = 1/194 (0%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ L+GI+ D V++AS + I +KD DK ++ L+ GEAGDTVQFAEYI
Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
Q N+QLY +R YELSP AA++F R LA LRSR P+ VN+L+ GYD ++E LY +D
Sbjct: 61 QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYD-EHEGPALYYMD 119
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
YL + P+AAHGY F T S+LDR+Y ++ + A+ LL++C++EL+ R ++
Sbjct: 120 YLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFS 179
Query: 181 VKIVDKDGVRVVDD 194
V+I+DK+G+ +D+
Sbjct: 180 VRIIDKNGIHDLDN 193
>7298330 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 201
Score = 152 bits (385), Expect = 2e-37
Identities = 78/190 (41%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ LLGI+ D V+LA+ R I ++K+ +K ++ L+S GE+GDT QF E+I
Sbjct: 1 METLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFI 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
N+ LY +R Y+LSP ++ F R LA+ LRSR P+QV + + GYD N EL ID
Sbjct: 61 SKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYD-PNAGPELTFID 119
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
YL + + YA HGY + S+ DR++ ++T EA + K+C+ E++ R+ V+ K
Sbjct: 120 YLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFT 179
Query: 181 VKIVDKDGVR 190
V +VDKDGVR
Sbjct: 180 VAVVDKDGVR 189
>At4g14800 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 199
Score = 149 bits (376), Expect = 2e-36
Identities = 77/190 (40%), Positives = 116/190 (60%), Gaps = 2/190 (1%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ + G+ I+A+ + I + K+ +DK L H L++ SGE GD VQF EY+
Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
Q N+ LY R LS AA++F R ELA +LR + P+ VN+L+ GYD K A LY ID
Sbjct: 61 QKNVSLYQFRNGIPLSTAAAANFTRGELATALR-KNPYSVNILMAGYD-KEAGASLYYID 118
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
Y+ T ++ A GY +++ S +DRHYR D++V+EA+ L+ +C+ E+ R+ + +
Sbjct: 119 YIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFV 178
Query: 181 VKIVDKDGVR 190
+KIVDKDG R
Sbjct: 179 IKIVDKDGAR 188
>At3g22630 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 204
Score = 147 bits (371), Expect = 9e-36
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ + G+ I+A+ + I + K+++DK L H L++ SGE GD VQF EY+
Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
Q N+ LY R L+ AA++F R ELA +LR + P+ VN+L+ GYD ++ A LY ID
Sbjct: 61 QKNVSLYKFRNGIPLTTAAAANFTRGELATALR-KNPYSVNILMAGYDDESG-ASLYYID 118
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
Y+ T ++ A GY +++ S +DRHYR D++V+EA+ L+ +C+ E+ R+ V +
Sbjct: 119 YIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFV 178
Query: 181 VKIVDKDGVR 190
+KIVDKDG R
Sbjct: 179 IKIVDKDGAR 188
>CE13818 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 202
Score = 147 bits (370), Expect = 1e-35
Identities = 80/196 (40%), Positives = 118/196 (59%), Gaps = 2/196 (1%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSD-DKTRQLLPHTLMSFSGEAGDTVQFAEY 59
M L+GI ++ VILA+ KA +IL DS+ DK +L M GE GD QF ++
Sbjct: 4 MHFLVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDW 63
Query: 60 IQANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQI 119
+ N+QLY +R YE+SP A FVR +A+ LRS+ + V+VLIGGYD K +KA L +
Sbjct: 64 TKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSV 123
Query: 120 DYLGTKV-ELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKG 178
DYL + + PY G+ G + ++++DR Y++D+T E L L+ +C+ E + R + G
Sbjct: 124 DYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPG 183
Query: 179 VIVKIVDKDGVRVVDD 194
V I+DK G R +DD
Sbjct: 184 YKVVIIDKKGYRKLDD 199
>7295930 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 210
Score = 126 bits (316), Expect = 2e-29
Identities = 64/193 (33%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ +LGI+ D V+LAS + + +KD K +L +M+ G+ GDT+QF ++I
Sbjct: 3 METILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFI 62
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
N+ LY I Y LS +A+ F R LA +R+ +QV +L+ GYD E +L+ ID
Sbjct: 63 SKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAV-EGPDLHYID 121
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
G + +A HG+ + S+L R++ L+ ++A L+K+CV E++ R+ ++ +
Sbjct: 122 SYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFE 181
Query: 181 VKIVDKDGVRVVD 193
V +VD G+R ++
Sbjct: 182 VYVVDSKGMRKME 194
>7295932 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 215
Score = 124 bits (311), Expect = 8e-29
Identities = 64/189 (33%), Positives = 108/189 (56%), Gaps = 1/189 (0%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
M+ +LG++ D +ILAS + L D KT ++ + +MS +G+ GD ++F+++I
Sbjct: 1 METILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMSTAGDGGDCLKFSDFI 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
NM LY I Y+L+ A F+R L+ L+S FQV++L+GGYD EL+ ID
Sbjct: 61 LRNMDLYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDL-TSGPELHYID 119
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
YLG V + Y HG A + +L+ Y+ D+ A ++K+CV EL R ++ + +
Sbjct: 120 YLGNSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCVIELYKRFVINLRNID 179
Query: 181 VKIVDKDGV 189
+ ++ K+G+
Sbjct: 180 LFLISKNGI 188
>ECU08g0280 [O] KOG0177 20S proteasome regulatory subunit beta type PSMB2/PRE1
Length = 197
Score = 112 bits (279), Expect = 4e-25
Identities = 55/189 (29%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Query: 1 MDVLLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI 60
MD +GI+ ++ I+A+ ++ I ++K++ +K + + +M+ +G GD + Y+
Sbjct: 1 MDSSIGIKGRNFAIVAADTKISSSILVVKENHEKFQVIKDRIVMAMTGNQGDAFRTMLYV 60
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
+ I+ ELSP + ++ ++ +SLR R+ ++ ++ G EK +L+ +D
Sbjct: 61 SESALYEEIQNGIELSPSVLAHMIQNKVHESLR-RRQLDISSIVAGRGP--EKYDLWSVD 117
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
G +P+ A GYA ++ + +LDR Y ED+T+D AL ++++CV L+ R+ ++ +G +
Sbjct: 118 KYGAISSVPFCASGYAAYFVYGILDREYSEDITIDAALSIMQKCVNLLKERLMINLEGFM 177
Query: 181 VKIVDKDGV 189
VKIV DG+
Sbjct: 178 VKIVTDDGI 186
>SPBC4C3.10c [O] KOG0174 20S proteasome regulatory subunit beta type
PSMB6/PSMB9/PRE3
Length = 226
Score = 71.6 bits (174), Expect = 6e-13
Identities = 50/186 (26%), Positives = 90/186 (47%), Gaps = 4/186 (2%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
+ +R KD VILA+ T G I DK QL + SG A DT A+ ++
Sbjct: 27 ITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYY 86
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
+ +Y I+ ++ S H A++ + +E+ +++ +++ GYD K ++Y I G
Sbjct: 87 LSMYRIQFGHDPSVHTAAT-LASEMC--YQNKNMLSAGLIVAGYDEKT-GGDVYSIPLGG 142
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVIVKI 183
+ + P A G + + D ++RE++T +EA+ LK V R + + I
Sbjct: 143 SLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVI 202
Query: 184 VDKDGV 189
++KDG+
Sbjct: 203 LNKDGM 208
>YJL001w [O] KOG0174 20S proteasome regulatory subunit beta type
PSMB6/PSMB9/PRE3
Length = 215
Score = 70.9 bits (172), Expect = 1e-12
Identities = 45/164 (27%), Positives = 79/164 (47%), Gaps = 5/164 (3%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++ + KD VIL + T G I DK ++ SG A DT A+ +Q +
Sbjct: 22 IMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYH 81
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
++LY + + AAS F EL ++ +++ GYD KN K E+Y I G
Sbjct: 82 LELYTSQYGTPSTETAASVF--KELC--YENKDNLTAGIIVAGYDDKN-KGEVYTIPLGG 136
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQE 167
+ +LPYA G + + D+++RE+++ +E + +K + +
Sbjct: 137 SVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQ 180
>At4g31300 [O] KOG0174 20S proteasome regulatory subunit beta type
PSMB6/PSMB9/PRE3
Length = 233
Score = 67.8 bits (164), Expect = 9e-12
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++G+ V+L + + G+ + + DK QL + + SG A D+ ++Y++
Sbjct: 15 IIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYF 74
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
+ + I+ + +++ +R + ++ Q +++GG+D K E ++Y I G
Sbjct: 75 LHQHTIQHGQPATVKVSANLIRM---LAYNNKNMLQTGLIVGGWD-KYEGGKIYGIPLGG 130
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVIVKI 183
T VE P+A G Y + D+ +++++T +EA L+ + V R V I
Sbjct: 131 TVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVI 190
Query: 184 VDKDGV 189
++ +GV
Sbjct: 191 INSEGV 196
>SPAC22D3.07 [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 267
Score = 61.6 bits (148), Expect = 6e-10
Identities = 42/163 (25%), Positives = 77/163 (46%), Gaps = 5/163 (3%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++G+ KD ++L + T G I + K + P+ + +G A DT I +N
Sbjct: 38 IVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSN 97
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
++L+ + N + A + ++ L R + +++GGYD K L+ I G
Sbjct: 98 IELHSLYTNRKPRVVTALTMLKQHL---FRYQGHIGAYLVLGGYDCKGP--HLFTIAAHG 152
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQ 166
+ +LPY A G S+L+ Y+ DL EA+ L+K+ ++
Sbjct: 153 SSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIE 195
>At1g56450 [O] KOG0185 20S proteasome regulatory subunit beta type PSMB4/PRE4
Length = 246
Score = 56.2 bits (134), Expect = 3e-08
Identities = 38/189 (20%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYI-QA 62
++ I+ KD V++AS + G ++ + ++ + + H+L+ SGE D + Y+ +
Sbjct: 34 IVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYLDEL 93
Query: 63 NMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYL 122
+ + + L P +++ + P +++GG KN K+ L + +
Sbjct: 94 TLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGG--VKNGKSYLGMVSMI 151
Query: 123 GTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVIVK 182
G E + A G+ +L + DL+ ++ + LL++C++ L R + +
Sbjct: 152 GVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIA 211
Query: 183 IVDKDGVRV 191
+ ++GV V
Sbjct: 212 KITEEGVTV 220
>7290639 [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 307
Score = 55.5 bits (132), Expect = 5e-08
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++GI KD VIL + T G + + K L H +G A DT A
Sbjct: 51 IVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAE 110
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
+ L+ + + AS +R L R + +++GG DT +LY I G
Sbjct: 111 LDLHRLNTERRVPVVCASMMLRRTL---FRYQGHIGAALVMGGVDTTG--PQLYCIYPCG 165
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
+ ++PYAA G S+L+ ++ DL +++ L+++ +
Sbjct: 166 SNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAI 207
>YPR103w [O] KOG0175 20S proteasome regulatory subunit beta type
PSMB5/PSMB8/PRE2
Length = 287
Score = 54.3 bits (129), Expect = 1e-07
Identities = 40/161 (24%), Positives = 78/161 (47%), Gaps = 3/161 (1%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQANM 64
L R + +I+A T G + + K ++ P L + +G A D + ++ +
Sbjct: 79 LAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQC 138
Query: 65 QLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLGT 124
+L+ +RE +S AAS + + L + + +I GY T+ E +Y +D GT
Sbjct: 139 RLHELREKERISVAAASKIL-SNLVYQYKGAG-LSMGTMICGY-TRKEGPTIYYVDSDGT 195
Query: 125 KVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
+++ G + + +LD +Y+ DL+V++AL L K+ +
Sbjct: 196 RLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSI 236
>7294336 [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 272
Score = 53.5 bits (127), Expect = 2e-07
Identities = 37/162 (22%), Positives = 74/162 (44%), Gaps = 5/162 (3%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++GI KD VIL + T G + + K L + +G A DT + I +
Sbjct: 42 IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
++L+ ++ + E+ AA++ ++ L R + +++GG D +Y I G
Sbjct: 102 LELHRLQTDREVRVVAANTMLKQML---FRYQGHISAALVLGGVDKTG--PHIYSIHPHG 156
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
+ +LPYA G ++ + ++ DL+ +E L++ +
Sbjct: 157 SSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAI 198
>Hs14774499 [O] KOG0174 20S proteasome regulatory subunit beta type
PSMB6/PSMB9/PRE3
Length = 239
Score = 53.1 bits (126), Expect = 2e-07
Identities = 37/155 (23%), Positives = 63/155 (39%), Gaps = 4/155 (2%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++ ++ V+L + T G I DK + SG A DT A+ +
Sbjct: 37 IMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQ 96
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
+ + I N H A+S + R R+ ++I G+D + E ++Y + G
Sbjct: 97 LGFHSIELNEPPLVHTAASLFK---EMCYRYREDLMAGIIIAGWDPQ-EGGQVYSVPMGG 152
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEAL 158
V +A G Y + +D YRE +T +E L
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECL 187
>CE05371 [O] KOG0183 20S proteasome regulatory subunit alpha type PSMA7/PRE6
Length = 253
Score = 50.1 bits (118), Expect = 2e-06
Identities = 44/186 (23%), Positives = 84/186 (44%), Gaps = 9/186 (4%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKDSDD--KTRQLLPHTLMSFSGEAGDTVQFAEYIQA 62
+G+R KD +++ K + I L+D K + H +++F+G + D + +
Sbjct: 34 VGVRGKDCIVIGVEK---KSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARI 90
Query: 63 NMQLYLIRENYELSPHAASSFVRTELAKSLRS--RKPFQVNVLIGGYDTKNEKAELYQID 120
Q Y + ++ S ++ + +S R+PF +++LIGG+D + L++ +
Sbjct: 91 ECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFD-HDGTPRLFKTE 149
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQELELRMPVDFKGVI 180
G E A G L+ Y E+ TVDEA LK V+ L +P + +
Sbjct: 150 PSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEAT-TLKLVVKSLAQVVPPGSQNIE 208
Query: 181 VKIVDK 186
+ ++ K
Sbjct: 209 IAVMKK 214
>At5g40580 [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 274
Score = 50.1 bits (118), Expect = 2e-06
Identities = 39/163 (23%), Positives = 71/163 (42%), Gaps = 7/163 (4%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++G+ KD VIL + T G + + +K + P+ +G A DT + + +
Sbjct: 42 IVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQ 101
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRS-RKPFQVNVLIGGYDTKNEKAELYQIDYL 122
++L+ Y+ + T L K L S + +++GG D L+ I
Sbjct: 102 LRLH----RYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITG--PHLHTIYPH 155
Query: 123 GTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
G+ LP+A G S+ + Y+E LT DE + L+ + +
Sbjct: 156 GSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAI 198
>CE19969 [O] KOG0175 20S proteasome regulatory subunit beta type
PSMB5/PSMB8/PRE2
Length = 284
Score = 49.7 bits (117), Expect = 3e-06
Identities = 38/153 (24%), Positives = 66/153 (42%), Gaps = 6/153 (3%)
Query: 10 KDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQANMQLYLI 69
K +I+A + G I S K + + + +G A D + + LY +
Sbjct: 80 KGGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYEL 139
Query: 70 RENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLGTKVELP 129
RE ++ AAS + L + V ++ GYD K +++++D G + +L
Sbjct: 140 REKTSITVSAASKYFANTLYGY--RGQGLSVGSMVAGYDKKGP--QIFKVDSEGDRCQLK 195
Query: 130 YAAHGYAGFYTFSLLDRHYREDLTVDEA--LGL 160
+ G + +LD HY+ +T DEA LGL
Sbjct: 196 VCSVGSGSLNAYGILDNHYKPKMTDDEARKLGL 228
>At3g27430 [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 283
Score = 49.7 bits (117), Expect = 3e-06
Identities = 39/163 (23%), Positives = 71/163 (42%), Gaps = 7/163 (4%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++G+ KD VIL + T G + + +K + P+ +G A DT + + +
Sbjct: 42 IVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQ 101
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRS-RKPFQVNVLIGGYDTKNEKAELYQIDYL 122
++L+ Y+ + T L K L S + +++GG D L+ I
Sbjct: 102 LRLH----RYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITG--PHLHTIYPH 155
Query: 123 GTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
G+ LP+A G S+ + Y+E LT DE + L+ + +
Sbjct: 156 GSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESI 198
>At1g16470 [O] KOG0181 20S proteasome regulatory subunit alpha type PSMA2/PRE8
Length = 235
Score = 49.7 bits (117), Expect = 3e-06
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKD--SDDKTRQLLPHTLMSFSGEAGD--TVQFAEYI 60
LGI+ + V++A+ K + SIL D S K + L P+ + +SG D +
Sbjct: 36 LGIKASNGVVIATEKKLP---SILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRK 92
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
QA L L +E ++ + + +PF V++L+ GYD K +LYQ+D
Sbjct: 93 QAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGP--QLYQVD 150
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEAL 158
G+ +A G + L++ Y ED+ +D+A+
Sbjct: 151 PSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAI 188
>At1g79210 [O] KOG0181 20S proteasome regulatory subunit alpha type PSMA2/PRE8
Length = 235
Score = 48.9 bits (115), Expect = 4e-06
Identities = 43/158 (27%), Positives = 73/158 (45%), Gaps = 9/158 (5%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKD--SDDKTRQLLPHTLMSFSGEAGD--TVQFAEYI 60
LGI+ + V++A+ K + SIL D S K + L P+ +SG D +
Sbjct: 36 LGIKASNGVVIATEKKLP---SILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRK 92
Query: 61 QANMQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQID 120
QA L L +E ++ + + +PF V++L+ GYD K +LYQ+D
Sbjct: 93 QAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGP--QLYQVD 150
Query: 121 YLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEAL 158
G+ +A G + L++ Y ED+ +D+A+
Sbjct: 151 PSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAI 188
>YOR157c [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 261
Score = 48.1 bits (113), Expect = 7e-06
Identities = 34/163 (20%), Positives = 76/163 (45%), Gaps = 5/163 (3%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
++G++ + V++A+ T+G + + K ++ P + +G A DT + I +N
Sbjct: 32 IVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSN 91
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
++L+ + + E +A ++ L K + +++ G D + L+ I G
Sbjct: 92 IELHSLYTSREPRVVSALQMLKQHLFK---YQGHIGAYLIVAGVDPTG--SHLFSIHAHG 146
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCVQ 166
+ Y + G ++L+ H+++DLT +EA+ L +Q
Sbjct: 147 STDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQ 189
>Hs4758970 [O] KOG0175 20S proteasome regulatory subunit beta type
PSMB5/PSMB8/PRE2
Length = 272
Score = 48.1 bits (113), Expect = 7e-06
Identities = 38/161 (23%), Positives = 70/161 (42%), Gaps = 4/161 (2%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQANM 64
L + + VI A + G I +K ++ P+ L + SG A D + +
Sbjct: 72 LAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKEC 131
Query: 65 QLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLGT 124
+LY +R +S AAS + + + + +I G+D K LY +D GT
Sbjct: 132 RLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMICGWDKKGPG--LYYVDEHGT 187
Query: 125 KVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
++ + G Y + ++D YR +L+ +EA L ++ +
Sbjct: 188 RLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 228
>Hs4506203 [O] KOG0173 20S proteasome regulatory subunit beta type
PSMB7/PSMB10/PUP1
Length = 277
Score = 48.1 bits (113), Expect = 7e-06
Identities = 34/162 (20%), Positives = 69/162 (41%), Gaps = 5/162 (3%)
Query: 4 LLGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQAN 63
+ G+ KD ++L + T G+ + + K + P+ +G A DT + I +N
Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSN 105
Query: 64 MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123
++L+ + A+ ++ L R + +++GG D LY I G
Sbjct: 106 LELHSLSTGRLPRVVTANRMLKQML---FRYQGYIGAALVLGGVDVTG--PHLYSIYPHG 160
Query: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
+ +LPY G ++ + +R D+ +EA L+ + +
Sbjct: 161 STDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAI 202
>Hs22056396 [O] KOG0175 20S proteasome regulatory subunit beta type
PSMB5/PSMB8/PRE2
Length = 276
Score = 48.1 bits (113), Expect = 7e-06
Identities = 38/161 (23%), Positives = 70/161 (42%), Gaps = 4/161 (2%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFAEYIQANM 64
L + + VI A + G I +K ++ P+ L + SG A D + +
Sbjct: 76 LAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKEC 135
Query: 65 QLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLGT 124
+LY +R +S AAS + + + + +I G+D K LY +D GT
Sbjct: 136 RLYYLRNGERISVSAASKLLSNMMCQY--RGMGLSMGSMICGWDKKGPG--LYYVDEHGT 191
Query: 125 KVELPYAAHGYAGFYTFSLLDRHYREDLTVDEALGLLKQCV 165
++ + G Y + ++D YR +L+ +EA L ++ +
Sbjct: 192 RLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 232
>ECU05g1400 [O] KOG0176 20S proteasome regulatory subunit alpha type PSMA5/PUP2
Length = 232
Score = 48.1 bits (113), Expect = 7e-06
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 5 LGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHTLMSFSGEAGDTVQFA----EYI 60
+G+R K+ VIL S K + + K S K ++ H ++ FSG +GDT ++
Sbjct: 34 IGVRTKEFVILCSEKKILSTLQNPK-SVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFC 92
Query: 61 QANMQLYLIRENYELSPHAASS----FVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAEL 116
++ +Y + E SS F + AK + R+PF V+++I G+DT + L
Sbjct: 93 ISHTHMYGENISVERLLKYLSSLSLRFGEEDEAKMI-FRRPFGVSLIIAGFDT---EPRL 148
Query: 117 YQIDYLGTKVELPYAAHGYAGFYTFSLLDRHYREDLTVDEAL 158
Y +D G+ + A G +L+ Y E +D++L
Sbjct: 149 YSLDPSGSYISYKAKAIGSGHEVVEGILENEYEEYSGLDQSL 190
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.138 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,697,721
Number of Sequences: 60738
Number of extensions: 420437
Number of successful extensions: 1123
Number of sequences better than 1.0e-05: 30
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1083
Number of HSP's gapped (non-prelim): 30
length of query: 195
length of database: 30,389,216
effective HSP length: 101
effective length of query: 94
effective length of database: 24,254,678
effective search space: 2279939732
effective search space used: 2279939732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)