ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII3046   suspect: LH   R     KOG4366  General function prediction only                               Predicted thioesterase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII3046 1050335 1049646 -230 
         (230 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YBR096w [R] KOG4366 Predicted thioesterase                            278   6e-75

>YBR096w [R] KOG4366 Predicted thioesterase
          Length = 230

 Score =  278 bits (710), Expect = 6e-75
 Identities = 128/222 (57%), Positives = 166/222 (74%)

Query: 6   TTFKYLFYAYLLSTYKSLPGAYYIRFWFYVIRNLFVPAVTGKNTNNIKTLQNDKYGVFRH 65
           T F++LF AYLLS+YKSLPGAY++RF++YVI+NLF+P  TG  T NIK L+ ++YG F +
Sbjct: 5   TIFRWLFAAYLLSSYKSLPGAYFVRFYYYVIQNLFLPMFTGFETENIKKLEKNEYGCFSY 64

Query: 66  TTLSTYCSWFEIDGYFHKSNSTYFEELDIARTDLMTKVFQKLFLTSKRYPYLPVAETSSC 125
           T+L TY S FE D YFHKSNSTYF ELDI+R +LM K+FQKL L SK YPY+PVA   + 
Sbjct: 65  TSLDTYASPFECDFYFHKSNSTYFAELDISRGNLMCKIFQKLMLNSKHYPYIPVANVFTN 124

Query: 126 FFKDIAPLQKYQIQSNVLCWDKKWLYILSKFTVNNGSTLVSLALTRYVFKDGRRTMKPAD 185
           F K+I P QKY + S ++CWD+KW+Y++S+FT+  G+ L SL+LT+YV KDGR+T+KP D
Sbjct: 125 FLKEIKPFQKYSVSSRIICWDEKWIYVMSRFTIKKGTVLCSLSLTKYVLKDGRKTIKPKD 184

Query: 186 VLEICGLYNEEVEKISAENLLSMGEHNGFENIQKLLELNGNY 227
            LE CGLYNE+V KIS +NL  + E  GF     L  L+  Y
Sbjct: 185 ALEYCGLYNEKVAKISEDNLKLLTERCGFHETVPLENLSQEY 226


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.323    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,664,489
Number of Sequences: 60738
Number of extensions: 555443
Number of successful extensions: 1215
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1214
Number of HSP's gapped (non-prelim): 1
length of query: 230
length of database: 30,389,216
effective HSP length: 103
effective length of query: 127
effective length of database: 24,133,202
effective search space: 3064916654
effective search space used: 3064916654
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)