ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII3055 good O KOG2157 Posttranslational modification, protein turnover, chaperones Predicted tubulin-tyrosine ligase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII3055 1054341 1052191 -717
(717 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR094w [O] KOG2157 Predicted tubulin-tyrosine ligase 751 0.0
SPAC12B10.04 [O] KOG2157 Predicted tubulin-tyrosine ligase 269 1e-71
Hs11068135 [O] KOG2157 Predicted tubulin-tyrosine ligase 73 2e-12
Hs13994343 [O] KOG2157 Predicted tubulin-tyrosine ligase 68 4e-11
7293324 [O] KOG2157 Predicted tubulin-tyrosine ligase 66 2e-10
7297164 [O] KOG2157 Predicted tubulin-tyrosine ligase 64 8e-10
7301565 [O] KOG2158 Tubulin-tyrosine ligase-related protein 63 2e-09
7292526 [O] KOG2157 Predicted tubulin-tyrosine ligase 59 3e-08
7297165 [O] KOG2157 Predicted tubulin-tyrosine ligase 58 4e-08
7302451 [O] KOG2158 Tubulin-tyrosine ligase-related protein 56 2e-07
CE24716 [O] KOG2156 Tubulin-tyrosine ligase-related protein 52 4e-06
>YBR094w [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 753
Score = 751 bits (1938), Expect = 0.0
Identities = 398/759 (52%), Positives = 512/759 (67%), Gaps = 48/759 (6%)
Query: 1 MKVLITNDDGPLSDQYSPYIRIFVQYLLK-HTDWDIYICIPNQQRSWIGKAHFANHNPTA 59
M+VLITNDDGPLSDQ+SPYIR F+Q++ + + +W I +C+P+ Q+SW+GKAH A N TA
Sbjct: 1 MRVLITNDDGPLSDQFSPYIRPFIQHIKRNYPEWKITVCVPHVQKSWVGKAHLAGKNLTA 60
Query: 60 SFIYSNPDATTNEFLGPFSVPQFKRLNKLSYSIPDLETSVVPENFIEWCLIDGTPATCSD 119
FIYS DA N F GPF PQ + N +P + + +P++ IEW LIDGTPA+C++
Sbjct: 61 QFIYSKVDAEDNTFWGPFIQPQIRSENS---KLPYVLNAEIPKDTIEWILIDGTPASCAN 117
Query: 120 IGLNHLVHETFDVLISGPNVGRNASAPYIGSSGTVGAAIDAYITNPSVKSFALSWAYFDG 179
IGL+ L +E FD+++SGPNVGRN SA YI SSGTVG A+++ IT + K+ A+SWAYF+G
Sbjct: 118 IGLHLLSNEPFDLVLSGPNVGRNTSAAYITSSGTVGGAMESVITG-NTKAIAISWAYFNG 176
Query: 180 VKIVDDETFEQVCAKSFEVIDYLIRNWDSEVKVYSINVPLRDLTG--SKFKYCPILESTW 237
+K V E+ +S +VI +L++NWD + +YSIN+PL + +K Y PI E+ W
Sbjct: 177 LKNVSPLLMEKASKRSLDVIKHLVKNWDPKTDLYSINIPLVESLSDDTKVYYAPIWENRW 236
Query: 238 CTIYSDAVLTPNTTTSNEDILDGHQSHTISFNWQPNFKLQRENM-----LREKS-LTDGS 291
I++ + N S +I DG++S +ISFNW P F ++++ ++++ LTD
Sbjct: 237 IPIFNGPHI--NLENSFAEIEDGNESSSISFNWAPKFGAHKDSIHYMDEYKDRTVLTDAE 294
Query: 292 CIEHGNVSVTPLSHTFKVVNKLHGEFQLNDPAQ--------IVLTIPETEYIYGPLNRSF 343
IE +SVTP+ TFK VN L GE +L + IV++I EYIY PL +
Sbjct: 295 VIESEMISVTPMKATFKGVNHLLGELKLTEEENNLSKTNNLIVVSIDPMEYIYKPLTHAL 354
Query: 344 RKHLPNVPVSRSLP------VTIDKLTFHYGDYEQLDMDQLMS-NQLYHANSYIYRKAII 396
+K+LP V + +LP + FHYGDYEQLDMD+LM Y NSYIYRKA+I
Sbjct: 355 KKYLPQVEIVSNLPEFDNGGCEKEMKVFHYGDYEQLDMDKLMELPNNYFTNSYIYRKALI 414
Query: 397 RKHYLSHTIHSYVVKNRESILNRAFLESFNIDVDYAEFLDDALDENWELRQELE--SKEK 454
RKH+LSHTI +Y KN ESIL +A+LESF ID+DY EFLDDALDENWELRQELE S++K
Sbjct: 415 RKHFLSHTIQTYTAKNPESILKKAYLESFTIDLDYREFLDDALDENWELRQELENESQDK 474
Query: 455 WWILKPSMSDKGQGIRIFKTIEQLQAIFDSFXXXXXXXXXXXXXXX------------KV 502
WWI+KPSMSDKGQGIR+FKTIE LQAIFDSF KV
Sbjct: 475 WWIVKPSMSDKGQGIRVFKTIEDLQAIFDSFDDEDSEAEESGNDDDADDVNGEFMDNNKV 534
Query: 503 ATSQLRHFIVQEYLHNPLLLSEAHGRKFHIRCYVTCSGDLQVFVYDRMLALFAPNKFVP- 561
SQLRHFI+QEYL NPLLL+ RKFHIRCYV C GDLQVFVYDRMLALFA FVP
Sbjct: 535 NISQLRHFIIQEYLTNPLLLASMDNRKFHIRCYVVCRGDLQVFVYDRMLALFAAKPFVPL 594
Query: 562 PTEEYDVLDIEQLACHLTNTCLQTDDDIKSNSVIEFDALKDIPSHRREEIRTQIHEAVSE 621
Y V D++ L CHLTNTCLQ+ K +SV+EFD++++IP+ R+ I+ QIH ++
Sbjct: 595 DPYAYSVTDLKDLECHLTNTCLQSKKKDKDSSVLEFDSIEEIPNERKSNIKEQIHSITND 654
Query: 622 LFKAAVNVDRLNFRPLKNSLETFGFDFLVDSDYQVKLLEVNAFPDFKQTGDDLKNLIDEL 681
+F AAVNV+RLNF+PL N+ ET+G DFL+DS+Y+VKLLE+NAFPDFKQTG DLKNLIDEL
Sbjct: 655 VFLAAVNVNRLNFQPLPNAFETYGVDFLIDSNYEVKLLEINAFPDFKQTGKDLKNLIDEL 714
Query: 682 FDDVVSICVRPMFN---LPPLHHQHSKFVEVLKLKSNDW 717
FDD V CV P+FN FV+V+ SN W
Sbjct: 715 FDDTVKYCVTPIFNENRNKTDDETDPNFVKVIDYTSNGW 753
>SPAC12B10.04 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 403
Score = 269 bits (687), Expect = 1e-71
Identities = 151/366 (41%), Positives = 224/366 (60%), Gaps = 29/366 (7%)
Query: 365 FHYGDYEQLDMDQLMSN-QLYHANSYIYRKAIIRKHYLSHTIHSYVVKNRESILNRAFLE 423
F + YE +D D++ N + SY+ RKA+IRK YL T+ +Y+ K+ +SIL+++ E
Sbjct: 45 FQWAQYEDIDFDEVYKNPKTKLCCSYVIRKALIRKEYLWRTVITYLAKHPDSILSKSVPE 104
Query: 424 SFNIDVDYAEFLDDALDENWELRQELE-------SKEKWWILKPSMSDKGQGIRIFKTIE 476
++++++DYAEFLDD+L E +ELRQELE S+++W+ILKPSM D+ QGIR+F TIE
Sbjct: 105 AYSLELDYAEFLDDSLMEAYELRQELEENATKNISEKQWYILKPSMCDRAQGIRLFSTIE 164
Query: 477 QLQAIFDSFXXXXXXXXXXX---------XXXXKVATSQLRHFIVQEYLHNPLLLSEAHG 527
+LQAIFDSF K+ SQ+R+F+VQ+Y+ PLLL
Sbjct: 165 ELQAIFDSFDDEESESEEAGLEEKGDITVAFNNKIVISQIRNFLVQKYISKPLLLDH--- 221
Query: 528 RKFHIRCYVTCSGDLQVFVYDRMLALFAPNKFVPPTEEYDVLDIEQLACHLTNTCLQTDD 587
RKFHIR YV +G L V++++ ML L A +K+ PT + D+L HL+NTCLQ D
Sbjct: 222 RKFHIRAYVLATGALSVYLFNEMLCLLARDKYKKPTPDPDLL-----FSHLSNTCLQ-GD 275
Query: 588 DIKSNSVIEFDALKDIPSHRREEIRTQIHEAVSELFKAAVNVDRLNFRPLKNSLETFGFD 647
+++ +S+ +F + +++I I + ++F+AA ++F+PL+N E FG D
Sbjct: 276 NVEQSSIRDF---WNTSIENKDDIFKSILNIIGDVFEAAATTQGIHFQPLENCFEIFGVD 332
Query: 648 FLVDSDYQVKLLEVNAFPDFKQTGDDLKNLIDELFDDVVSICVRPMFNLPPLHHQHSKFV 707
FLVD + QV LLEVN++PDFKQTG +L N+I+ LF VV + P F + SK
Sbjct: 333 FLVDCESQVYLLEVNSYPDFKQTGKNLSNIIENLFSAVVETAIIPFFESSTKRNVDSKLT 392
Query: 708 EVLKLK 713
KL+
Sbjct: 393 LAKKLQ 398
>Hs11068135 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 423
Score = 72.8 bits (177), Expect = 2e-12
Identities = 65/277 (23%), Positives = 117/277 (41%), Gaps = 26/277 (9%)
Query: 440 DENWELRQELESKEKWWILKPSMSDKGQGIRIFKTIEQLQAIFDSFXXXXXXXXXXXXXX 499
D N + + +S WI+KP +G+GI + + Q++
Sbjct: 119 DYNLFVEEFRKSPSSTWIMKPCGKAQGKGIFLINKLSQIKK-----------WSRDSKTS 167
Query: 500 XKVATSQLRHFIVQEYLHNPLLLSEAHGRKFHIRCYVTCSG--DLQVFVYDRMLALFAPN 557
V+ S +++ Y++NPLL+ GRKF +R YV S L+ ++Y F
Sbjct: 168 SFVSQSNKEAYVISLYINNPLLIG---GRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTV 224
Query: 558 KFVPPTEEYDVLDIEQLACHLTNTCLQTDDD----IKSNSVIEFDALKDIPSHRREEIRT 613
K+ P T E D + + HLTN +Q + I + + S R +E+ +
Sbjct: 225 KYTPSTSELDNMFV-----HLTNVAIQKHGEDYNHIHGGKWTVSNLRLYLESTRGKEVTS 279
Query: 614 QIHEAVSELFKAAVNVDRLNFRPLKNSLETFGFDFLVDSDYQVKLLEVNAFPDFKQTGDD 673
++ + + + ++ K+ E +G+D ++D + L+EVNA P + +
Sbjct: 280 KLFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPSLTSSTAN 339
Query: 674 LKNLIDELFDDVVSICVRPMFNLPPLHHQHSKFVEVL 710
+ L L +D ++I V P +P S EVL
Sbjct: 340 DRILKYNLINDTLNIAV-PNGEIPDCKWNKSPPKEVL 375
>Hs13994343 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 592
Score = 68.2 bits (165), Expect = 4e-11
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 63/258 (24%)
Query: 424 SFNIDVDYAEFLDDALDENWELRQELESKEKWWILKPSMSDKGQGIRIFKTIEQLQAIFD 483
+F + DY +F+ + E RQ L +K +WI KP+ +G+GI IF + IFD
Sbjct: 181 TFVMPNDYTKFVAEYFQE----RQMLGTKHSYWICKPAELSRGRGILIFSDFKDF--IFD 234
Query: 484 SFXXXXXXXXXXXXXXXKVATSQLRHFIVQEYLHNPLLLSEAHGRKFHIRCYVTCSG--D 541
+IVQ+Y+ NPLL+ K +R YV +G
Sbjct: 235 DM------------------------YIVQKYISNPLLIGR---YKCDLRIYVCVTGFKP 267
Query: 542 LQVFVYDRMLALFAPNKFVPPTEEYDVLDIEQLACHLTNTCLQTDDDIKSNSVIEFDALK 601
L ++VY L FA TE++D+ +++ HLTN+ + + S ++ +K
Sbjct: 268 LTIYVYQEGLVRFA-------TEKFDLSNLQNNYAHLTNSSI-------NKSGASYEKIK 313
Query: 602 DIPSHRREEIRTQIHEAVSE-------LFKAAVNVDRLNFRPL-------KNSLETFGFD 647
++ H + ++ + L+K + L + N E FGFD
Sbjct: 314 EVIGHGCKWTLSRFFSYLRSWDVDDLLLWKKIHRMVILTILAIAPSVPFAANCFELFGFD 373
Query: 648 FLVDSDYQVKLLEVNAFP 665
L++ + + LLEVN P
Sbjct: 374 ILINDNLKPWLLEVNYSP 391
>7293324 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 496
Score = 65.9 bits (159), Expect = 2e-10
Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 46/270 (17%)
Query: 456 WILKPSMSDKGQGIRIFKTIEQLQAIFDSFXXXXXXXXXXXXXXXKVATSQLRH--FIVQ 513
WI+KP +G GI + + +L+ + Q+ ++
Sbjct: 195 WIVKPCSKSQGVGIYLVNKLSKLKKF---------------AYDARTFYPQINRDTCVIS 239
Query: 514 EYLHNPLLLSEAHGRKFHIRCYV--TCSGDLQVFVYDRMLALFAPNKFVPPTEEYDVLDI 571
+Y+ NPLL+ G+KF +R +V T L+ ++Y F TE+YD +I
Sbjct: 240 KYIDNPLLIG---GKKFDLRLFVLVTTFNPLKAYLYKEGFCRFC-------TEKYDETEI 289
Query: 572 EQLACHLTNTCLQ-TDDDIKS---------NSVIEFDALKDIPSHRREEIRTQIHEAVSE 621
+ + HLTN +Q T+ + S N + D+L R E + + ++
Sbjct: 290 DNVFMHLTNVSIQKTNQEYNSIHGGKWPLQNLWLYLDSL------RGEGVSDMLWSRITA 343
Query: 622 LFKAAVNVDRLNFRPLKNSLETFGFDFLVDSDYQVKLLEVNAFPDFKQTGDDLKNLIDEL 681
+ +++ ++ E +G+D ++D++ + L+E+N P T + + L L
Sbjct: 344 TIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTNDRMLKSRL 403
Query: 682 FDDVVSICVRPMFNLPPLHHQHSKFVEVLK 711
D+V+ + V P +P H + E+LK
Sbjct: 404 IDNVLDVVVPPNC-MPNEHWDKTPNPELLK 432
>7297164 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 719
Score = 63.9 bits (154), Expect = 8e-10
Identities = 78/376 (20%), Positives = 152/376 (39%), Gaps = 70/376 (18%)
Query: 344 RKHLPNVPVSRSLPVTIDKLTFHYGDYEQLDMDQLMSNQLYHANSYIYRKAIIRKHYLSH 403
R+H P +S + + L F G +++ + HA Y A I+ +
Sbjct: 295 REHQPAELISENGTIFSTTLDFALGKVKKM---------VRHAEHYSLDDARIKPPTPAE 345
Query: 404 TIHS--YVVKNRESILNRA-FLESFNIDVDYAEFLDDALDENWELRQEL--ESKEKWWIL 458
+ + ++V++ + + + A F S + +YA LD+ LR + + WIL
Sbjct: 346 IVENQTFMVQSTDVLKSNAKFKVSEKVMAEYARLAGLYLDQIESLRPDYRWDGSRNLWIL 405
Query: 459 KPSMSDKGQGIRIFKTIEQLQAIFDSFXXXXXXXXXXXXXXXKVATSQLRHFIVQEYLHN 518
KP +G GI I +++ + + +Q + +IVQ+Y+
Sbjct: 406 KPGYQSRGIGIVIRSSLDDI--------------------LQWTSNNQNKKYIVQKYIER 445
Query: 519 PLLLSEAHGRKFHIRCYVTCS---GDLQVFVYDRMLALFAPNKFVPPTEEYDVLDIEQLA 575
PLL+ + KF IR Y+ + + ++ Y F+ +F +D + +
Sbjct: 446 PLLI---YRTKFDIRQYMLLTITDTKVSIWTYRDCYLRFSSQEFT--------MDDLRES 494
Query: 576 CHLTNTCLQT--------DDDIKSNSVIEFDALKDI------PSHRREEIRTQIHEAVSE 621
HLTN +Q D + N++ D K+ P + + +
Sbjct: 495 IHLTNNSVQKRYKNKTNRDSRLPKNNMWSLDQFKNYLRIMGAPDGSWSKTYNGFKQNLVA 554
Query: 622 LFKAAVNVDRLNFRPLKNSLETFGFDFLVDSDYQVKLLEVNAFPDFKQTGDDLKNLIDEL 681
+ A+++ L L+N+ E +G DF++D Y L+E+N+ PD + + + +
Sbjct: 555 VVMASLDETEL----LQNAFELYGCDFMLDEHYNPILIEINSTPDLSPSTEITARICPMV 610
Query: 682 FDDVVSICVRPMFNLP 697
D C+R + +LP
Sbjct: 611 LKD----CIRVVVDLP 622
>7301565 [O] KOG2158 Tubulin-tyrosine ligase-related protein
Length = 720
Score = 62.8 bits (151), Expect = 2e-09
Identities = 68/273 (24%), Positives = 109/273 (39%), Gaps = 73/273 (26%)
Query: 419 RAFLESFNIDVDYAEFLDDALDENWELRQELESKEKWWILKPSMSDKGQGIRIFKTIEQL 478
+ F +++ + DY + ++ AL+ ++ +ILKP +G+GI + ++ +
Sbjct: 230 KIFPKTWMLPADYGDAMNYALNH-----------KRTFILKPDSGAQGRGIWLTNDLKTI 278
Query: 479 QAIFDSFXXXXXXXXXXXXXXXKVATSQLRHFIVQEYLHNPLLLSEAHGRKFHIRCY--V 536
I Q Y+H PLL+ G KF +R Y +
Sbjct: 279 --------------------------GPHERLICQTYIHRPLLID---GYKFDLRVYTLI 309
Query: 537 TCSGDLQVFVYDRMLALFAPNKFVPPTEEYDVLDIEQLACHLTNTCLQTDDDIKSNSVIE 596
T L++FVY+ LA FA NK+V PT + L HLTN + K NS E
Sbjct: 310 TSVDPLRIFVYNEGLARFATNKYVEPTPG----NANDLYMHLTNYSVN-----KRNSHYE 360
Query: 597 FDALKDIPSHRR---------------EEIRTQIHEAVSELFKAAVNVDRLNFR------ 635
D S R+ EE + + + + + +A V + N+
Sbjct: 361 LCDNDDCGSKRKLSAINNWMRRHNYDVEEFWSNVDDVIIKTVLSAWPVLKHNYHACFPGH 420
Query: 636 -PLKNSLETFGFDFLVDSDYQVKLLEVNAFPDF 667
++ E GFD LVD + +LEVN P F
Sbjct: 421 DKIQACFEILGFDILVDWKLKPYILEVNHSPSF 453
>7292526 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 487
Score = 58.5 bits (140), Expect = 3e-08
Identities = 50/243 (20%), Positives = 106/243 (43%), Gaps = 26/243 (10%)
Query: 456 WILKPSMSDKGQGIRIFKTIEQLQAIFDSFXXXXXXXXXXXXXXXKVATSQLRHFIVQEY 515
WI+KP +G GI + + +L+ ++A +++ Y
Sbjct: 211 WIMKPCGKSQGAGIFLINKLSKLKK---------WSREAKGPFHPQIAKES---YVISRY 258
Query: 516 LHNPLLLSEAHGRKFHIRCYVTCSG--DLQVFVYDRMLALFAPNKFVPPTEEYDVLDIEQ 573
+ NPLL+ G+KF +R YV + L+ +++ + F K+ + V +++
Sbjct: 259 IDNPLLIG---GKKFDLRLYVLVASFRPLKAYLFKQGFCRFCTVKY-----DTSVTELDN 310
Query: 574 LACHLTNTCLQTD----DDIKSNSVIEFDALKDIPSHRREEIRTQIHEAVSELFKAAVNV 629
+ HLTN +Q + + + + R +E+ ++ A+S L ++
Sbjct: 311 MYVHLTNVSVQKHGGEYNTLHGGKWSVQNLALYLEGTRGKEVTDRLFGAISWLIVHSLRA 370
Query: 630 DRLNFRPLKNSLETFGFDFLVDSDYQVKLLEVNAFPDFKQTGDDLKNLIDELFDDVVSIC 689
++ E +G+D ++D+ + L+EVNA P T + + L +L D+++S+
Sbjct: 371 VAPVMASDRHCFECYGYDIIIDNALKPWLVEVNASPSLTSTTVNDRILKYKLIDNILSVV 430
Query: 690 VRP 692
+ P
Sbjct: 431 LPP 433
>7297165 [O] KOG2157 Predicted tubulin-tyrosine ligase
Length = 992
Score = 58.2 bits (139), Expect = 4e-08
Identities = 63/272 (23%), Positives = 124/272 (45%), Gaps = 51/272 (18%)
Query: 435 LDDALDENWELRQELESKEKWWILKPSMSDKGQGIRIFKTIEQLQAIFDSFXXXXXXXXX 494
L D + +W + L+ + WI+KP+ +G+GI + ++++ + +
Sbjct: 398 LVDKMKVHWP-QYSLDGYQNMWIVKPANKCRGRGIILMDNLKKILGVVN----------- 445
Query: 495 XXXXXXKVATSQLRHFIVQEYLHNPLLLSEAHGRKFHIRCY--VTCSGDLQVFVYDRMLA 552
++ + ++VQ+Y+ PL+L + KF IR + +T + L V+ Y
Sbjct: 446 -------LSIASKSRYVVQKYIERPLILFQT---KFDIRQWFLITNTQPLVVWFYRESYL 495
Query: 553 LFAPNKFVPPTEEYDVLDIEQLACHLTNTCLQT-------DDDIKSNSVIE---FDA-LK 601
F+ ++EY + + + + HLTN +Q D + S ++ + F A L+
Sbjct: 496 RFS-------SQEYSLSNHHE-SVHLTNYAIQKKYTNGKRDKRLPSENMWDCYSFQAYLR 547
Query: 602 DIPSHRR--EEIRTQIHEAVSELFKAAV-NVDRLNFRPLKNSLETFGFDFLVDSDYQVKL 658
I + E I + +A+ A+ N+DR RP N+ E FG DF++ ++ L
Sbjct: 548 QIGKYNMWLERIFPGMRKAIVGCMLASQENMDR---RP--NTFELFGADFMICENFYPWL 602
Query: 659 LEVNAFPDFKQTGDDLKNLIDELFDDVVSICV 690
+E+N+ PD T + + +DVV + +
Sbjct: 603 IEINSSPDLGATTSVTARMCPQCLEDVVKVVI 634
>7302451 [O] KOG2158 Tubulin-tyrosine ligase-related protein
Length = 892
Score = 56.2 bits (134), Expect = 2e-07
Identities = 52/174 (29%), Positives = 79/174 (44%), Gaps = 26/174 (14%)
Query: 511 IVQEYLHNPLLLSEAHGRKFHIRCY--VTCSGDLQVFVYDRMLALFAPNKFVPPTEEYDV 568
I Q Y+ PLL+ G KF +R Y VT L++FVY+ LA FA K+VPPT
Sbjct: 295 ICQTYIERPLLID---GYKFDLRVYTLVTSVDPLRIFVYNEGLARFATQKYVPPTTG--- 348
Query: 569 LDIEQLACHLTNTCLQ-------TDDDIKSNSVIEFDAL-KDIPSHRRE--EIRTQIHEA 618
+ + HLTN CL + ++ S + A K + H + E + +A
Sbjct: 349 -NSHNVFMHLTNYCLNRRNSQYMVGNGPEAGSKRKLSAFNKWLVDHNYDVGEFWASVDDA 407
Query: 619 VSELFKAAVNVDRLNFR-------PLKNSLETFGFDFLVDSDYQVKLLEVNAFP 665
+ + +A + N+ ++ S + GFD LVD + +LEVN P
Sbjct: 408 IIKTLISAWPTLKHNYNVCFPKHDKIQASFQLLGFDILVDWKLKPYILEVNHTP 461
>CE24716 [O] KOG2156 Tubulin-tyrosine ligase-related protein
Length = 680
Score = 51.6 bits (122), Expect = 4e-06
Identities = 49/169 (28%), Positives = 76/169 (43%), Gaps = 22/169 (13%)
Query: 511 IVQEYLHNPLLLSEAHGRKFHIR--CYVTCSGDLQVFVYDRMLALFAPNKFVPPTEEYDV 568
+ Q Y+ PL ++ A KF +R YV L+V++YD+ L FA + + V
Sbjct: 359 VAQHYIERPLTINRA---KFDLRLYAYVPTFEPLRVYIYDQGLVRFASVPY-----SHSV 410
Query: 569 LDIEQLACHLTNTCLQ--TDDDIKSNSVIEFDALKDIPSH------RREEIRTQIHEAVS 620
I HLTN + + D +N + L + H RE+I+ +I E +
Sbjct: 411 STISNKYMHLTNYSINKLAEADGVANKPVPKWTLHHLWEHFDEMGVDREKIQREIEEVII 470
Query: 621 ELFKAAVNVDRLNF-RPLKNSL---ETFGFDFLVDSDYQVKLLEVNAFP 665
+ F + R + R L+ E FG D ++D DY+ LLEVN P
Sbjct: 471 KAFISTEKPIREHMSRFLEQEFICYELFGIDIILDEDYKPWLLEVNISP 519
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.138 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,289,960
Number of Sequences: 60738
Number of extensions: 2069399
Number of successful extensions: 4759
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4724
Number of HSP's gapped (non-prelim): 15
length of query: 717
length of database: 30,389,216
effective HSP length: 114
effective length of query: 603
effective length of database: 23,465,084
effective search space: 14149445652
effective search space used: 14149445652
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)