ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactII3113 good R KOG3157 General function prediction only Proline synthetase co-transcribed protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactII3113 1072041 1071268 -258
(258 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBL036c [R] KOG3157 Proline synthetase co-transcribed protein 330 2e-90
SPAC644.09 [R] KOG3157 Proline synthetase co-transcribed protein 178 6e-45
CE02615 [R] KOG3157 Proline synthetase co-transcribed protein 152 3e-37
7301909 [R] KOG3157 Proline synthetase co-transcribed protein 149 4e-36
At1g11930 [R] KOG3157 Proline synthetase co-transcribed protein 145 7e-35
Hs6005842 [R] KOG3157 Proline synthetase co-transcribed protein 141 8e-34
At4g26860 [R] KOG3157 Proline synthetase co-transcribed protein 128 9e-30
Hs18601845 [R] KOG3157 Proline synthetase co-transcribed protein 57 2e-08
>YBL036c [R] KOG3157 Proline synthetase co-transcribed protein
Length = 257
Score = 330 bits (845), Expect = 2e-90
Identities = 162/253 (64%), Positives = 208/253 (82%), Gaps = 7/253 (2%)
Query: 12 MSSDISYDAVRKEELIGAYQTMKDKINATAQEVGNVN-----VELLAVSKYKPAADIKIL 66
MS+ I+YD RK +LI Y+++++ +NA A+ V +VN + LL VSK KPA+DI+IL
Sbjct: 1 MSTGITYDEDRKTQLIAQYESVREVVNAEAKNV-HVNENASKILLLVVSKLKPASDIQIL 59
Query: 67 YDYGVRHFGENYVQEMITKSEILPQDIKWHFIGGLQSNKCKDLAKIANLYSVETVDSLKK 126
YD+GVR FGENYVQE+I K+++LP DIKWHFIGGLQ+NKCKDLAK+ NLYSVET+DSLKK
Sbjct: 60 YDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKDLAKVPNLYSVETIDSLKK 119
Query: 127 AKKLEEARGKWNPDAPVITCNVQINTSGEEQKSGLFAEVEVYSIVE-YLIKEAKHVSLNG 185
AKKL E+R K+ PD I CNVQINTS E+QKSGL E E++ +++ +L +E K++ LNG
Sbjct: 120 AKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNG 179
Query: 186 LMTVGSWDVSHSGNEENQDFARLVEWKKKLDAKYGLDLKLSMGMTADFRQAIKQGTSEVR 245
LMT+GSW+VSH ++EN+DFA LVEWKKK+DAK+G LKLSMGM+ADFR+AI+QGT+EVR
Sbjct: 180 LMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTSLKLSMGMSADFREAIRQGTAEVR 239
Query: 246 IGTAIFGSRPLKN 258
IGT IFG+RP KN
Sbjct: 240 IGTDIFGARPPKN 252
>SPAC644.09 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 237
Score = 178 bits (452), Expect = 6e-45
Identities = 100/225 (44%), Positives = 150/225 (66%), Gaps = 13/225 (5%)
Query: 35 DKINATAQEVGNV-NVELLAVSKYKPAADIKILYDYGVRHFGENYVQEMITKSEILPQDI 93
D I + Q+ N NV L+AVSK+ P + Y+ G RHFGENY+QE + K E++P D+
Sbjct: 9 DLIRSQIQQSANGRNVLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDV 68
Query: 94 KWHFIGGLQSNKCKDLAKIANLYSVETVDSLKKAKKLEEARGKWNPDAPVITCNV--QIN 151
+WHFIG LQS+KCK +A + NLYS+ET+D+ KKA+ + AR +A + NV Q+N
Sbjct: 69 QWHFIGSLQSSKCKKIASVKNLYSIETIDTEKKARLVNSAR-----EALQLPLNVYIQVN 123
Query: 152 TSGEEQKSGLFAEVEVYSIVEYLIKEAKHVSLNGLMTVGSWDVSHSG-NEENQDFARLVE 210
TSGEE K G+ +V + + +++ K++ L GLMT+GS +S+S ++ N DF L +
Sbjct: 124 TSGEENKGGV-TPSKVLELCKQ-VQDMKYLRLKGLMTIGS--ISNSQLSDHNPDFQVLSD 179
Query: 211 WKKKLDAKYGLDLKLSMGMTADFRQAIKQGTSEVRIGTAIFGSRP 255
++ L + G+ L+LSMGM++D+ AIK G+ VR+G++IFGSRP
Sbjct: 180 LRESLQNELGIPLQLSMGMSSDYLLAIKYGSDSVRVGSSIFGSRP 224
>CE02615 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 244
Score = 152 bits (385), Expect = 3e-37
Identities = 95/250 (38%), Positives = 145/250 (58%), Gaps = 14/250 (5%)
Query: 16 ISYDAVRKEELIGAYQTMKDKINATAQEVGNVNVELLAVSKYKPAADIKILYDYGVRHFG 75
+S + V+K L + + D + A+ L+AVSK K A I+ Y RHFG
Sbjct: 1 MSIEIVQKS-LFNIIEAVADAVTASQ---ATKRCRLVAVSKTKSADLIEACYSQNQRHFG 56
Query: 76 ENYVQEMITKSEILPQ---DIKWHFIGGLQSNKCKDLAKIANLYSVETVDSLKKAKKLEE 132
ENYVQE+ KS++L DI+WHFIG +QSNK + L+ VETV++ K A+ ++
Sbjct: 57 ENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGKICNSPGLWCVETVETEKHARIFDK 116
Query: 133 ARGKWNPDAPVITCNVQINTSGEEQKSGLFAEV-EVYSIVEYLIKEAKHVSLNGLMTVGS 191
K + + VQ+NTSGE+ K G+ E+ E + E++ KE +++ +G MT+GS
Sbjct: 117 EWSKHGANLSPLRVLVQVNTSGEDNKGGI--EIGEAPKLAEFIRKECQNLKFDGFMTIGS 174
Query: 192 WDVSHSGNEENQDFARLVEWKKKLDAKYGL---DLKLSMGMTADFRQAIKQGTSEVRIGT 248
+D SH+ EN DF +L + ++ + G ++LSMGM+ DF QAI QG + VR+G+
Sbjct: 175 FDNSHASG-ENPDFEKLFKVRQTWAEQTGESADSVELSMGMSDDFLQAIHQGATSVRVGS 233
Query: 249 AIFGSRPLKN 258
+FG+R KN
Sbjct: 234 KLFGAREYKN 243
>7301909 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 249
Score = 149 bits (376), Expect = 4e-36
Identities = 92/225 (40%), Positives = 139/225 (60%), Gaps = 11/225 (4%)
Query: 42 QEVGNVNVELLAVSKYKPAADIKILYDYGVRHFGENYVQEMITKS---EILPQ--DIKWH 96
+EV L+AVSK KPA + Y+ G R FGENYVQE+ KS +IL + DI+WH
Sbjct: 26 KEVQAARPLLVAVSKTKPAEAVIEAYEGGQRDFGENYVQELEEKSRHPDILAKCPDIRWH 85
Query: 97 FIGGLQSNKCKDLAKIANLYSVETVDSLKKAKKLEEARGKWNP-DAPVITCNVQINTSGE 155
FIG +QSNK + + NL+ ++TVDS K A KL+ A K P + +QINTSGE
Sbjct: 86 FIGHMQSNKINKILSVPNLHMIQTVDSEKLATKLDAAWSKRQPTPEEPLQVLIQINTSGE 145
Query: 156 EQKSGLFAEVEVYSIVEYLIKEAKHVSLNGLMTVGSWDVSHSGNEENQDFARLVEWKKKL 215
+ KSG+ A+ + ++ +Y+ KH++L G+MT+G++ +S N N DF L++ + +
Sbjct: 146 DVKSGIEAK-DAPALYQYIKSNLKHLNLMGIMTIGAFGFDYS-NGPNPDFVSLMQVHRSI 203
Query: 216 DAKYGL---DLKLSMGMTADFRQAIKQGTSEVRIGTAIFGSRPLK 257
+ L + +SMGM+ DF +AI+ G++ VR+G++IFG R K
Sbjct: 204 CEAHSLAPDSVLVSMGMSNDFDKAIEMGSTVVRVGSSIFGHRAAK 248
>At1g11930 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 255
Score = 145 bits (365), Expect = 7e-35
Identities = 91/234 (38%), Positives = 143/234 (60%), Gaps = 13/234 (5%)
Query: 27 IGAYQTMKDKINATAQEVGNVN--VELLAVSKYKPAADIKILYDYGVRHFGENYVQEMIT 84
+ A +++ ++N A++ G + + ++AVSK KP + I+ +YD G R FGENYVQE+I
Sbjct: 24 VAALRSVFQRVNQAAEKAGRGSDQIRVVAVSKTKPVSLIRQVYDAGQRSFGENYVQEIIE 83
Query: 85 KSEILPQDIKWHFIGGLQSNKCKD-LAKIANLYSVETVDSLKKAKKLEEARGKWNPDAPV 143
K+ LP+DI+WHFIG LQSNK K L+ + NL +VE+VD K A L+ G N
Sbjct: 84 KAPQLPEDIEWHFIGNLQSNKVKPLLSGVPNLVTVESVDDEKIANMLDRVVG--NIGRKP 141
Query: 144 ITCNVQINTSGEEQKSGLFAEVEVYSIVEYLIKEAKHVSLNGLMTVGSWDVSHSGNEENQ 203
+ VQ+NTSGE+ K G+ V + +++ + ++ +GLMT+G D ++ EN
Sbjct: 142 LKVFVQVNTSGEDSKFGVEPSGCV-GLAKHVKEACSNLEFSGLMTIGMAD--YTSTPEN- 197
Query: 204 DFARLVEWKKKLDAKYGL---DLKLSMGMTADFRQAIKQGTSEVRIGTAIFGSR 254
F L + + ++ + G+ +LSMGM+ DF AI+ G++ VRIG+ IFG+R
Sbjct: 198 -FKLLAKCRSEVCKELGIPEEQCELSMGMSGDFELAIELGSTNVRIGSTIFGAR 250
>Hs6005842 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 275
Score = 141 bits (356), Expect = 8e-34
Identities = 91/219 (41%), Positives = 132/219 (59%), Gaps = 17/219 (7%)
Query: 47 VNVELLAVSKYKPAADIKILYDYGVRHFGENYVQEMITKSE-----ILPQDIKWHFIGGL 101
+ L+AVSK KPA + Y +G R FGENYVQE++ K+ L +IKWHFIG L
Sbjct: 38 IQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHL 97
Query: 102 QSNKCKDLAKIANLYSVETVDSLKKAKKLEEA-RGKWNPDAPVITCNVQINTSGEEQKSG 160
Q L + NL+ +ETVDS+K A K+ + + K +P+ + VQINTSGEE K G
Sbjct: 98 QKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQRKGSPER--LKVMVQINTSGEESKHG 155
Query: 161 LFAEVEVYSIVEYLIKEAKHVSLNGLMTVGSW--DVSHSGNEENQDFARLVEWKKKLDAK 218
L E +IVE++ + ++ GLMT+GS+ D+S N DF L+ +++L K
Sbjct: 156 L-PPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQG---PNPDFQLLLSLREELCKK 211
Query: 219 YGL---DLKLSMGMTADFRQAIKQGTSEVRIGTAIFGSR 254
+ ++LSMGM+ADF+ A++ G++ VRIG+ IFG R
Sbjct: 212 LNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGER 250
>At4g26860 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 262
Score = 128 bits (321), Expect = 9e-30
Identities = 95/239 (39%), Positives = 129/239 (53%), Gaps = 33/239 (13%)
Query: 41 AQEVGN--VNVELLAVSKYKPAADIKILYDYGVRHFGENYVQEMITKSEILPQDIKWHFI 98
A++VG V +L VSK KP + I+ +YD G R FGENYVQE+I K+ LP+DI+WHF+
Sbjct: 25 AEQVGRDAERVRVLPVSKTKPVSLIRQIYDAGHRCFGENYVQEIIDKAPQLPEDIEWHFV 84
Query: 99 GGLQSNKCKD-LAKIANLYSVETVDSLKKAKKLEEARGKWNPDAPVITCNVQINTSGEEQ 157
G LQSNK K L + NL V VD K A L+ A N + VQ+NTSGE
Sbjct: 85 GHLQSNKAKTLLTGVPNLAMVHGVDGEKVANHLDRAVS--NLGRHPLKVLVQVNTSGEVS 142
Query: 158 KSGLFAEVEVYSIVEYLIKEAKH----VSLNGLMTVGSWDVSHSGNEENQDFARLVEWKK 213
KSG +E S+VE L + KH + +GLMT+G D + S E + F L+ +
Sbjct: 143 KSG----IEPSSVVE-LARHVKHHCPNLVFSGLMTIGMPDYT-STPENFRVFYYLIGYLF 196
Query: 214 KLDAKYGL------------------DLKLSMGMTADFRQAIKQGTSEVRIGTAIFGSR 254
+ + Y +LSMGM+ DF AI+ G++ VR+G+ IFG R
Sbjct: 197 YVFSGYSYKFYLPRADVCKALGMAEDQFELSMGMSGDFELAIEMGSTNVRVGSTIFGPR 255
>Hs18601845 [R] KOG3157 Proline synthetase co-transcribed protein
Length = 169
Score = 57.4 bits (137), Expect = 2e-08
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 4 RGLIVARRMSSDISYDAVRKEELIGAYQTMKDKINATAQEVGNVNVELLAVSKYKPAADI 63
RG+ A MS+++ L + ++ + +++ + L+AVSK KPA +
Sbjct: 34 RGMWRAGSMSAELGVGCA----LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMV 89
Query: 64 KILYDYGVRHFGENYVQEMITKSE-----ILPQDIKWHFIGGLQSNKCKDL 109
Y +G R FGENYVQE++ K+ L +IKWHFIG LQ L
Sbjct: 90 IEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKL 140
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.133 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,277,994
Number of Sequences: 60738
Number of extensions: 573202
Number of successful extensions: 1542
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1515
Number of HSP's gapped (non-prelim): 8
length of query: 258
length of database: 30,389,216
effective HSP length: 104
effective length of query: 154
effective length of database: 24,072,464
effective search space: 3707159456
effective search space used: 3707159456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)