ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactII3212   suspect: LH   G     KOG4754  Carbohydrate transport and metabolism                          Predicted phosphoglycerate mutase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactII3212 1104254 1103391 -288 
         (288 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YKL128c [G] KOG4754 Predicted phosphoglycerate mutase                 219   4e-57

>YKL128c [G] KOG4754 Predicted phosphoglycerate mutase
          Length = 295

 Score =  219 bits (558), Expect = 4e-57
 Identities = 119/279 (42%), Positives = 160/279 (56%), Gaps = 9/279 (3%)

Query: 8   AVPGYFTSFGDENVLSHRGDEGQHLGFVDGCSGWEDIQRLLDEDSS---LKLLVLARHGQ 64
           AVPGYF ++  E        +  HL  ++    W+++   +  ++     KLL+LARHGQ
Sbjct: 5   AVPGYFAAYPSEGFQGLDSTKYDHLELINH-KNWKELYHAIPRNTKNRHYKLLILARHGQ 63

Query: 65  GHHNALESKYGTQEWERYWALQPGVHEVTLVDAQLTELGKQQVRSTGKELLLPMVEKIG- 123
           G+HNA   +YG ++W+ YW+L  G      +D++LT LGK QVR TG  +LLPM +++G 
Sbjct: 64  GYHNAAILRYGMEKWDAYWSLLSGDEHGEWLDSKLTPLGKDQVRRTGSNVLLPMAKQLGM 123

Query: 124 FPEKFYSSPLRRCLETYMESWGQXXXXXXXX-XXXXXXXXXKEQCRETLGRHYCDKRLPH 182
            P  F+SSP+RRCLET++ESW                     E  RETLG H CDKR+ H
Sbjct: 124 LPHVFFSSPMRRCLETFIESWTPVLAETQELPAGTKISTRIIEGLRETLGSHTCDKRVAH 183

Query: 183 DHVVEQYGEETLLGNTKVHWVYEPGMANEDTMWSETHRETVEEIDYRIGGALQEL---LS 239
              V++Y + +      VHW Y P    +D +W   HRET  E+D R    L EL   LS
Sbjct: 184 SMAVDEYQDFSTESGHTVHWQYVPDYPEDDELWLPDHRETCAEMDKRTLNGLFELFNQLS 243

Query: 240 GEERYISLTCHSGVIQSALRVLKHPEILQLQTGGVVFVL 278
            EE++ISLTCHSGVIQS LR L+HP I  L TG VV V+
Sbjct: 244 SEEKFISLTCHSGVIQSVLRNLQHPPIYNLDTGKVVAVV 282


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.317    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,770,835
Number of Sequences: 60738
Number of extensions: 719886
Number of successful extensions: 1528
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1523
Number of HSP's gapped (non-prelim): 1
length of query: 288
length of database: 30,389,216
effective HSP length: 105
effective length of query: 183
effective length of database: 24,011,726
effective search space: 4394145858
effective search space used: 4394145858
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)